Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGCCTCAAGGATTGACGTTTCAATTGTTGGTTGAGGCTATAATGTCCCGGCTAGGAATAGTAGGTAATTTTGATCATCCATAAATTTTTTCATGCATAGGTCCCCAATATTATATAAGGAGGGGTATGAAATTAACAGACGACCGGGATGTTAGTTGGTTTATGAACACTATTTCCAGTGTTTCATCAAATAGTTGTTCACTAGTAGTTAAATGCAGTAATAGCCTTTTAGTTATACTGGACAATATGATTGTTGAATCTTCCAACCCGAATAAACTGATTACTCCCAGTAGATTCTTTCACAACATTGATGTGTCAAAAGTTAAGAATGATTTTTCACATTGAATTGTATGACATGTTTAATGGCAAGATTAATTTACAGAATGTTTTGCGTGTTATTGCCTTGAGAGACAATTTTCAGTATAGGACTGTAAAATCCGACAATGAGTTGTGGTTAGTTAAATGTGTCATTGAGGATTGCAATTGGTCTATTCGTGCCAGTCGATATGGCGATTTTTAAAAGCGAAACATGGATTGTGAAGAAAATCATTAGTGATCATTCGTGTTCTCTTGATGTCGTATTGAATGATCATAAACAAGCAACCTCATATGTCATTAAAGAGTGTATTAAGAGGAAGATGAGCATTACTGGAAGCGAATTGAAAACACCTAAAGATATTGTTTCCTTCATTCGTTTTGAACATGGCATCCACATAAGTTATCAAAAATCTTCTCTAGCACGAATGTTTCCTTCATTCGTGCTAGAGAAGCGGCTCTAAATGAAATTTGAGGCTCACCTGCAGACTCATTCTCTTCAATCCCAGCATTTTCTTACATGCTGAAGTTAAAAAACCTAGGTACATAACTTATGAATGCATTATATTTTATTCTCAAACAGCAACATATTTTAAATACATGGTATTTTATATATATGCAGGTAATTACACAGCATACAAGGTAGATGGTGATGGTCGTTTCCTGTATTTTTTTCATGTCTCTTTCTGCTTCTATTGTTGGATAGATTTATTTTCGGGCAATCATATCTGTAGATGGTACTCATTTGAAGAACAAATATTCTGGTACTTTATTGGCAGCTTGTACTTTGGATGCCAACAGCCAAATATTCCCTTTAGGTTGTGCAGTTGTTGATTCTGAGAACGATTCATCGTGGCAATGGTTTTTCCTTCAATTGAAGTTTGCCATTGGAGATCGAAATGACTTCCTTATCGTTTCAGACAGACACAGGAGTATATTAAAAGTCGTTCCAAAGGTATTTCCTAATGCATTCCATGGCATATGTATATACCATTTACTGCAGAACCTAAAGCAGACCTACAAAGGTGATCTCGTTGATGCATTATACTATTCAACAGCAAAGGCTTTCAATGTTGTTGATTTCGAGCATAACATGCAAGAGTTAGAAAGTGAAGCCCCAGGTATTCGTGATGGTTTAAATAAGATAGGTTTTGCGAAATGGTCTCGTGCATTCTGTCCTCGTCGAAGATATACAGTTATGACCATTAATATATCTAAAAGTTTTAACTCCGTTGTCTTAGAAGCTAGAGAGTTGCCGATAACTTCTATGTTAGAAGTGATAAGAATGCTTTTGCAGAGGTGGTTTTATGAACGAAAAAATGATGCAGACTACCAAGTTACTTATTTGACCAAATCGGCTGAGTTAAAATTACGAGAGTTAATAGAGGAAGGTCGTCAAATGCAGGTATTCTGTCAATCACATACCTTATGTTGCAATATATTATTATTTCATATTAAGTATATATTGTGATTCTTTTTTCTGTTTTAAGGTAAATCCAGTTAATAACCATTTGTATCAAGTCGTTAGTGGTTCAGATCAGTTCGACGTTGACCTCATCAACCGAACTTGTTCTTGTCGAATTTGGGACCAACTAGAAATTCCATGTCCGCATGCTTATGTCGTATTGTCTCGAAAGCCTCTATCGACAAAGGATTATGTATCGGCCTATTATACTAATGATTCGCTACGATCAACATATAGTGGAATTGTTCATCCAATTGGCAATGAAGCTTCTTGGGTTATTCCAGAAAATTTGAAGACCGTGAAAATATTCCCTCCAAATGTCAAGCGTGCAGCTGAAAGGCCAAAGAAAGTAAGAATCCCGTCAACAATGGAATTTAAGAGGAGAGTCAAATGTGGTCGTTGTGGACGAGTTGGTCACAACAGGAAGACATGCAAATTCGCCCTTACCCAATAG
mRNA sequence
ATGTTGCCTCAAGGATTGACGTTTCAATTGTTGGTTGAGGCTATAATGTCCCGGCTAGGAATAGTAGATGGTACTCATTTGAAGAACAAATATTCTGGTACTTTATTGGCAGCTTGTACTTTGGATGCCAACAGCCAAATATTCCCTTTAGGTTGTGCAGTTGTTGATTCTGAGAACGATTCATCGTGGCAATGGTTTTTCCTTCAATTGAAGTTTGCCATTGGAGATCGAAATGACTTCCTTATCGTTTCAGACAGACACAGGAGTATATTAAAAGTCGTTCCAAAGGTATTTCCTAATGCATTCCATGGCATATGTATATACCATTTACTGCAGAACCTAAAGCAGACCTACAAAGGTGATCTCGTTGATGCATTATACTATTCAACAGCAAAGGCTTTCAATGTTGTTGATTTCGAGCATAACATGCAAGAGTTAGAAAGTGAAGCCCCAGGTATTCGTGATGGTTTAAATAAGATAGGTTTTGCGAAATGGTCTCGTGCATTCTGTCCTCGTCGAAGATATACAGTTATGACCATTAATATATCTAAAAGTTTTAACTCCGTTGTCTTAGAAGCTAGAGAGTTGCCGATAACTTCTATGTTAGAAGTGATAAGAATGCTTTTGCAGAGGTGGTTTTATGAACGAAAAAATGATGCAGACTACCAAGTTACTTATTTGACCAAATCGGCTGAGTTAAAATTACGAGAGTTAATAGAGGAAGGTCGTCAAATGCAGGTAAATCCAGTTAATAACCATTTGTATCAAGTCGTTAGTGGTTCAGATCAGTTCGACGTTGACCTCATCAACCGAACTTGTTCTTGTCGAATTTGGGACCAACTAGAAATTCCATGTCCGCATGCTTATGTCGTATTGTCTCGAAAGCCTCTATCGACAAAGGATTATGTATCGGCCTATTATACTAATGATTCGCTACGATCAACATATAGTGGAATTGTTCATCCAATTGGCAATGAAGCTTCTTGGGTTATTCCAGAAAATTTGAAGACCGTGAAAATATTCCCTCCAAATGTCAAGCGTGCAGCTGAAAGGCCAAAGAAAGTAAGAATCCCGTCAACAATGGAATTTAAGAGGAGAGTCAAATGTGGTCGTTGTGGACGAGTTGGTCACAACAGGAAGACATGCAAATTCGCCCTTACCCAATAG
Coding sequence (CDS)
ATGTTGCCTCAAGGATTGACGTTTCAATTGTTGGTTGAGGCTATAATGTCCCGGCTAGGAATAGTAGATGGTACTCATTTGAAGAACAAATATTCTGGTACTTTATTGGCAGCTTGTACTTTGGATGCCAACAGCCAAATATTCCCTTTAGGTTGTGCAGTTGTTGATTCTGAGAACGATTCATCGTGGCAATGGTTTTTCCTTCAATTGAAGTTTGCCATTGGAGATCGAAATGACTTCCTTATCGTTTCAGACAGACACAGGAGTATATTAAAAGTCGTTCCAAAGGTATTTCCTAATGCATTCCATGGCATATGTATATACCATTTACTGCAGAACCTAAAGCAGACCTACAAAGGTGATCTCGTTGATGCATTATACTATTCAACAGCAAAGGCTTTCAATGTTGTTGATTTCGAGCATAACATGCAAGAGTTAGAAAGTGAAGCCCCAGGTATTCGTGATGGTTTAAATAAGATAGGTTTTGCGAAATGGTCTCGTGCATTCTGTCCTCGTCGAAGATATACAGTTATGACCATTAATATATCTAAAAGTTTTAACTCCGTTGTCTTAGAAGCTAGAGAGTTGCCGATAACTTCTATGTTAGAAGTGATAAGAATGCTTTTGCAGAGGTGGTTTTATGAACGAAAAAATGATGCAGACTACCAAGTTACTTATTTGACCAAATCGGCTGAGTTAAAATTACGAGAGTTAATAGAGGAAGGTCGTCAAATGCAGGTAAATCCAGTTAATAACCATTTGTATCAAGTCGTTAGTGGTTCAGATCAGTTCGACGTTGACCTCATCAACCGAACTTGTTCTTGTCGAATTTGGGACCAACTAGAAATTCCATGTCCGCATGCTTATGTCGTATTGTCTCGAAAGCCTCTATCGACAAAGGATTATGTATCGGCCTATTATACTAATGATTCGCTACGATCAACATATAGTGGAATTGTTCATCCAATTGGCAATGAAGCTTCTTGGGTTATTCCAGAAAATTTGAAGACCGTGAAAATATTCCCTCCAAATGTCAAGCGTGCAGCTGAAAGGCCAAAGAAAGTAAGAATCCCGTCAACAATGGAATTTAAGAGGAGAGTCAAATGTGGTCGTTGTGGACGAGTTGGTCACAACAGGAAGACATGCAAATTCGCCCTTACCCAATAG
Protein sequence
MLPQGLTFQLLVEAIMSRLGIVDGTHLKNKYSGTLLAACTLDANSQIFPLGCAVVDSENDSSWQWFFLQLKFAIGDRNDFLIVSDRHRSILKVVPKVFPNAFHGICIYHLLQNLKQTYKGDLVDALYYSTAKAFNVVDFEHNMQELESEAPGIRDGLNKIGFAKWSRAFCPRRRYTVMTINISKSFNSVVLEARELPITSMLEVIRMLLQRWFYERKNDADYQVTYLTKSAELKLRELIEEGRQMQVNPVNNHLYQVVSGSDQFDVDLINRTCSCRIWDQLEIPCPHAYVVLSRKPLSTKDYVSAYYTNDSLRSTYSGIVHPIGNEASWVIPENLKTVKIFPPNVKRAAERPKKVRIPSTMEFKRRVKCGRCGRVGHNRKTCKFALTQ
Homology
BLAST of Lcy03g001890 vs. ExPASy TrEMBL
Match:
A0A6J1C328 (uncharacterized protein LOC111006994 OS=Momordica charantia OX=3673 GN=LOC111006994 PE=4 SV=1)
HSP 1 Score: 361.7 bits (927), Expect = 3.9e-96
Identity = 187/336 (55.65%), Postives = 229/336 (68.15%), Query Frame = 0
Query: 22 VDGTHLKNKYSGTLLAACTLDANSQIFPLGCAVVDSENDSSWQWFFLQLKFAIGDRNDFL 81
VDGT +KNKY+GTL++ACTLDAN QIFPL +V DSEND+SW FF QLK IG R D +
Sbjct: 312 VDGTSMKNKYAGTLISACTLDANHQIFPLAFSVXDSENDASWVXFFEQLKRCIGVRQDLV 371
Query: 82 IVSDRHRSILKVVPKVFPNAFHGICIYHLLQNLKQTYKGDLVDALYYSTAKAFNVVDFEH 141
IVSDRH+SI K KVF A H IC YHL +NLK YK + D L++ AKA+NV DFE
Sbjct: 372 IVSDRHKSIGKSAEKVFTTACHCICAYHLFKNLKLKYKDKVSDNLFFPCAKAYNVEDFED 431
Query: 142 NMQELESEAPGIRDGLNKIGFAKWSRAFCPRRRYTVMTINISKSFNSVVLEARELPITSM 201
NM+ L+S GIR+ L+ IGF+KWS AF RY MT NIS+S N+ + +ARELPITSM
Sbjct: 432 NMRLLDSTVRGIREELSVIGFSKWSCAFSSSSRYNFMTTNISESLNAAMKDARELPITSM 491
Query: 202 LEVIRMLLQRWFYERKNDADYQVTYLTKSAELKLRELIEEGRQMQVNPVNNHLYQVVSGS 261
LEV+RM+LQRWFYERKN AD+Q+T TKS E KLRE I +GR M V VNN +YQV+
Sbjct: 492 LEVVRMMLQRWFYERKNHADFQITEFTKSVEKKLREQISDGRTMHVYAVNNDIYQVIDNH 551
Query: 262 DQFDVDLINRTCSCRIWDQLEIPCPHAYVVLSRKPLSTKDYVSAYYTNDSLRSTYSGIVH 321
Q + K L TK YVS YY+N+ LRSTYSG +H
Sbjct: 552 RQVE-----------------------------KHLPTKGYVSLYYSNNYLRSTYSGSIH 611
Query: 322 PIGNEASWVIPENLKTVKIFPPNVKRAAERPKKVRI 358
P+G+++SW IPE++K +K+ PPNVKR A RPKK+RI
Sbjct: 612 PLGHQSSWNIPEDVKIIKMLPPNVKRPAGRPKKLRI 618
BLAST of Lcy03g001890 vs. ExPASy TrEMBL
Match:
A0A5D3DAW8 (Protein FAR1-RELATED SEQUENCE 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold184G001090 PE=4 SV=1)
HSP 1 Score: 333.2 bits (853), Expect = 1.5e-87
Identity = 170/365 (46.58%), Postives = 230/365 (63.01%), Query Frame = 0
Query: 22 VDGTHLKNKYSGTLLAACTLDANSQIFPLGCAVVDSENDSSWQWFFLQLKFAIGDRNDFL 81
VDGT LK+KY GTLL A T+D N+QIFPL ++VDSEND+SW+WFF +K ++GDR D +
Sbjct: 349 VDGTFLKSKYGGTLLTASTIDGNNQIFPLAFSIVDSENDASWRWFFENIKNSLGDREDLV 408
Query: 82 IVSDRHRSILKVVPKVFPNAFHGICIYHLLQNLKQTYKGDLVDALYYSTAKAFNVVDFEH 141
++SDRH SI K V VFPNA + +C+ HLL++LK YK ++D L++ KA+ VVDFE
Sbjct: 409 VISDRHLSIPKSVHNVFPNAEYCVCLQHLLKSLKLIYKDPIIDKLFFRCGKAYTVVDFET 468
Query: 142 NMQELESEAPGIRDGLNKIGFAKWSRAFCPRRRYTVMTINISKSFNSVVLEARELPITSM 201
NM+ +ES P IRD L+K+ F KW+RA+C R+RY +MT NIS+S N+V+ E+R+LP+ ++
Sbjct: 469 NMRWMESMYPSIRDYLSKVSFEKWARAYCTRKRYQMMTTNISESLNAVLKESRDLPVAAL 528
Query: 202 LEVIRMLLQRWFYERKNDADYQVTYLTKSAELKLRELIEEGRQMQVNPVNNHLYQVVSGS 261
L+ IR +LQ WFY+R+ A T LT AE +LR + R VN +N+ +QV+ G
Sbjct: 529 LDSIRQILQNWFYDRRKVACCMRTVLTSWAEGELRIQHQNSRSFTVNAINDVEFQVIDGR 588
Query: 262 DQFDVDLINRTCSCRIWDQLEIPCPHAYVVLSRKPLSTKDYVSAYYTNDSLRSTYSGIVH 321
QF V L ++C+CR+WD EIPC HA VL +
Sbjct: 589 KQFIVRLDCKSCTCRVWDLDEIPCAHALAVLRG-------------------------LR 648
Query: 322 PIGNEASW--VIPENLKTVKIFPPNVKRAAERPKKVRIPSTMEFKRRVKCGRCGRVGHNR 381
P+GN A+W + EN I PP KR A RP+K RI S E K +C C R GHNR
Sbjct: 649 PVGNHANWKSIGIEN----NILPPTFKRRAGRPRKQRILSIGEKKSHSRCSHCHRAGHNR 684
Query: 382 KTCKF 385
+ CKF
Sbjct: 709 RNCKF 684
BLAST of Lcy03g001890 vs. ExPASy TrEMBL
Match:
A0A5A7T3G5 (Protein FAR1-RELATED SEQUENCE 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold139G00710 PE=4 SV=1)
HSP 1 Score: 332.4 bits (851), Expect = 2.5e-87
Identity = 170/365 (46.58%), Postives = 230/365 (63.01%), Query Frame = 0
Query: 22 VDGTHLKNKYSGTLLAACTLDANSQIFPLGCAVVDSENDSSWQWFFLQLKFAIGDRNDFL 81
VDGT LK+KY GTLL A T+D N+QIFPL ++VDSEND+SW+WFF +K ++GDR D +
Sbjct: 349 VDGTFLKSKYGGTLLTASTIDGNNQIFPLAFSIVDSENDASWRWFFENIKNSLGDREDLV 408
Query: 82 IVSDRHRSILKVVPKVFPNAFHGICIYHLLQNLKQTYKGDLVDALYYSTAKAFNVVDFEH 141
++SDRH SI K V VFPNA + +C+ HLL++LK YK ++D L++ KA+ VVDFE
Sbjct: 409 VISDRHLSIPKSVHNVFPNAEYCVCLQHLLKSLKLIYKDPIIDKLFFRCGKAYTVVDFET 468
Query: 142 NMQELESEAPGIRDGLNKIGFAKWSRAFCPRRRYTVMTINISKSFNSVVLEARELPITSM 201
NM+ +ES P IRD L+K+ F KW+RA+C R+RY +MT NIS+S N+V+ E+R+LP+ ++
Sbjct: 469 NMRWMESMYPSIRDYLSKVSFEKWARAYCTRKRYQMMTTNISESLNAVLKESRDLPVAAL 528
Query: 202 LEVIRMLLQRWFYERKNDADYQVTYLTKSAELKLRELIEEGRQMQVNPVNNHLYQVVSGS 261
L+ IR +LQ WFY+R+ A T LT AE +LR + R VN +N+ +QV+ G
Sbjct: 529 LDSIRQILQNWFYDRRKVACCMRTVLTSWAEGELRIQHQNSRSFTVNAINDVEFQVIDGR 588
Query: 262 DQFDVDLINRTCSCRIWDQLEIPCPHAYVVLSRKPLSTKDYVSAYYTNDSLRSTYSGIVH 321
QF V L ++C+CR+WD EIPC HA VL +
Sbjct: 589 KQFIVRLDCKSCTCRVWDLDEIPCAHALAVLRG-------------------------LR 648
Query: 322 PIGNEASW--VIPENLKTVKIFPPNVKRAAERPKKVRIPSTMEFKRRVKCGRCGRVGHNR 381
P+GN A+W + EN I PP KR A RP+K RI S E K +C C R GHNR
Sbjct: 649 PVGNHANWKSIGIEN----NILPPTFKRRAGRPRKQRILSIGEKKIHSRCSHCHRAGHNR 684
Query: 382 KTCKF 385
+ CKF
Sbjct: 709 RNCKF 684
BLAST of Lcy03g001890 vs. ExPASy TrEMBL
Match:
A0A5A7UZ18 (Protein FAR1-RELATED SEQUENCE 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold108G001920 PE=4 SV=1)
HSP 1 Score: 332.4 bits (851), Expect = 2.5e-87
Identity = 170/365 (46.58%), Postives = 230/365 (63.01%), Query Frame = 0
Query: 22 VDGTHLKNKYSGTLLAACTLDANSQIFPLGCAVVDSENDSSWQWFFLQLKFAIGDRNDFL 81
VDGT LK+KY GTLL A T+D N+QIFPL ++VDSEND+SW+WFF +K ++GDR D +
Sbjct: 349 VDGTFLKSKYGGTLLTASTIDGNNQIFPLAFSIVDSENDASWRWFFENIKNSLGDREDLV 408
Query: 82 IVSDRHRSILKVVPKVFPNAFHGICIYHLLQNLKQTYKGDLVDALYYSTAKAFNVVDFEH 141
++SDRH SI K V VFPNA + +C+ HLL++LK YK ++D L++ KA+ VVDFE
Sbjct: 409 VISDRHLSIPKSVHNVFPNAEYCVCLQHLLKSLKLIYKDPIIDKLFFRCGKAYTVVDFET 468
Query: 142 NMQELESEAPGIRDGLNKIGFAKWSRAFCPRRRYTVMTINISKSFNSVVLEARELPITSM 201
NM+ +ES P IRD L+K+ F KW+RA+C R+RY +MT NIS+S N+V+ E+R+LP+ ++
Sbjct: 469 NMRWMESMYPSIRDYLSKVSFEKWARAYCTRKRYQMMTTNISESLNAVLKESRDLPVAAL 528
Query: 202 LEVIRMLLQRWFYERKNDADYQVTYLTKSAELKLRELIEEGRQMQVNPVNNHLYQVVSGS 261
L+ IR +LQ WFY+R+ A T LT AE +LR + R VN +N+ +QV+ G
Sbjct: 529 LDSIRQILQNWFYDRRKVACCMRTVLTSWAEGELRIQHQNSRSFTVNAINDVEFQVIDGR 588
Query: 262 DQFDVDLINRTCSCRIWDQLEIPCPHAYVVLSRKPLSTKDYVSAYYTNDSLRSTYSGIVH 321
QF V L ++C+CR+WD EIPC HA VL +
Sbjct: 589 KQFIVRLDCKSCTCRVWDLDEIPCAHALAVLRG-------------------------LR 648
Query: 322 PIGNEASW--VIPENLKTVKIFPPNVKRAAERPKKVRIPSTMEFKRRVKCGRCGRVGHNR 381
P+GN A+W + EN I PP KR A RP+K RI S E K +C C R GHNR
Sbjct: 649 PVGNHANWKSIGIEN----NILPPTFKRRAGRPRKQRILSIGEKKIHSRCSHCHRAGHNR 684
Query: 382 KTCKF 385
+ CKF
Sbjct: 709 RNCKF 684
BLAST of Lcy03g001890 vs. ExPASy TrEMBL
Match:
A0A5A7VG38 (Protein FAR1-RELATED SEQUENCE 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1023G00100 PE=4 SV=1)
HSP 1 Score: 331.3 bits (848), Expect = 5.6e-87
Identity = 170/365 (46.58%), Postives = 229/365 (62.74%), Query Frame = 0
Query: 22 VDGTHLKNKYSGTLLAACTLDANSQIFPLGCAVVDSENDSSWQWFFLQLKFAIGDRNDFL 81
VDGT LK+KY GTLL A T+D N+QIFPL ++VDSEND+SW+WFF +K ++GDR D +
Sbjct: 349 VDGTFLKSKYGGTLLTASTIDGNNQIFPLAFSIVDSENDASWRWFFENIKNSLGDREDLV 408
Query: 82 IVSDRHRSILKVVPKVFPNAFHGICIYHLLQNLKQTYKGDLVDALYYSTAKAFNVVDFEH 141
++SDRH SI K V VFPNA + +C+ HLL++LK YK ++D L++ KA+ VVDFE
Sbjct: 409 VISDRHLSIPKSVHNVFPNAEYCVCLQHLLKSLKLIYKDPIIDKLFFRCGKAYTVVDFET 468
Query: 142 NMQELESEAPGIRDGLNKIGFAKWSRAFCPRRRYTVMTINISKSFNSVVLEARELPITSM 201
NM+ +ES P IRD L+K+ F KW+RA+C R+RY +MT NIS+S N+V+ E+R+LP+ ++
Sbjct: 469 NMRWMESMYPSIRDYLSKVSFEKWARAYCTRKRYQMMTTNISESLNAVLKESRDLPVAAL 528
Query: 202 LEVIRMLLQRWFYERKNDADYQVTYLTKSAELKLRELIEEGRQMQVNPVNNHLYQVVSGS 261
L+ IR +LQ WFY+R+ A T LT AE +LR + R VN +N+ +QV+ G
Sbjct: 529 LDSIRQILQNWFYDRRKVACCMRTVLTSWAEGELRIQHQNSRSFTVNAINDVEFQVIDGR 588
Query: 262 DQFDVDLINRTCSCRIWDQLEIPCPHAYVVLSRKPLSTKDYVSAYYTNDSLRSTYSGIVH 321
QF V L ++C+C +WD EIPC HA VL R
Sbjct: 589 KQFIVRLDCKSCTCCVWDLDEIPCAHALAVLLR--------------------------- 648
Query: 322 PIGNEASW--VIPENLKTVKIFPPNVKRAAERPKKVRIPSTMEFKRRVKCGRCGRVGHNR 381
P+GN A+W + EN I PP KR A RP+K RI S E K +C C R GHNR
Sbjct: 649 PVGNHANWKSIGIEN----NILPPTFKRQAGRPRKQRILSIGEKKSHSRCSHCHRAGHNR 682
Query: 382 KTCKF 385
+ CKF
Sbjct: 709 RNCKF 682
BLAST of Lcy03g001890 vs. NCBI nr
Match:
XP_022134813.1 (uncharacterized protein LOC111006994 [Momordica charantia])
HSP 1 Score: 361.7 bits (927), Expect = 8.0e-96
Identity = 187/336 (55.65%), Postives = 229/336 (68.15%), Query Frame = 0
Query: 22 VDGTHLKNKYSGTLLAACTLDANSQIFPLGCAVVDSENDSSWQWFFLQLKFAIGDRNDFL 81
VDGT +KNKY+GTL++ACTLDAN QIFPL +V DSEND+SW FF QLK IG R D +
Sbjct: 312 VDGTSMKNKYAGTLISACTLDANHQIFPLAFSVXDSENDASWVXFFEQLKRCIGVRQDLV 371
Query: 82 IVSDRHRSILKVVPKVFPNAFHGICIYHLLQNLKQTYKGDLVDALYYSTAKAFNVVDFEH 141
IVSDRH+SI K KVF A H IC YHL +NLK YK + D L++ AKA+NV DFE
Sbjct: 372 IVSDRHKSIGKSAEKVFTTACHCICAYHLFKNLKLKYKDKVSDNLFFPCAKAYNVEDFED 431
Query: 142 NMQELESEAPGIRDGLNKIGFAKWSRAFCPRRRYTVMTINISKSFNSVVLEARELPITSM 201
NM+ L+S GIR+ L+ IGF+KWS AF RY MT NIS+S N+ + +ARELPITSM
Sbjct: 432 NMRLLDSTVRGIREELSVIGFSKWSCAFSSSSRYNFMTTNISESLNAAMKDARELPITSM 491
Query: 202 LEVIRMLLQRWFYERKNDADYQVTYLTKSAELKLRELIEEGRQMQVNPVNNHLYQVVSGS 261
LEV+RM+LQRWFYERKN AD+Q+T TKS E KLRE I +GR M V VNN +YQV+
Sbjct: 492 LEVVRMMLQRWFYERKNHADFQITEFTKSVEKKLREQISDGRTMHVYAVNNDIYQVIDNH 551
Query: 262 DQFDVDLINRTCSCRIWDQLEIPCPHAYVVLSRKPLSTKDYVSAYYTNDSLRSTYSGIVH 321
Q + K L TK YVS YY+N+ LRSTYSG +H
Sbjct: 552 RQVE-----------------------------KHLPTKGYVSLYYSNNYLRSTYSGSIH 611
Query: 322 PIGNEASWVIPENLKTVKIFPPNVKRAAERPKKVRI 358
P+G+++SW IPE++K +K+ PPNVKR A RPKK+RI
Sbjct: 612 PLGHQSSWNIPEDVKIIKMLPPNVKRPAGRPKKLRI 618
BLAST of Lcy03g001890 vs. NCBI nr
Match:
XP_024030312.1 (uncharacterized protein LOC112094204 [Morus notabilis])
HSP 1 Score: 348.6 bits (893), Expect = 7.0e-92
Identity = 176/362 (48.62%), Postives = 239/362 (66.02%), Query Frame = 0
Query: 22 VDGTHLKNKYSGTLLAACTLDANSQIFPLGCAVVDSENDSSWQWFFLQLKFAIGDRNDFL 81
VDGT LKN++SGTLL + LDA++ IF LG A+VDSENDSSW+WFF +LK AIG R +
Sbjct: 196 VDGTFLKNEFSGTLLLSAVLDADNHIFLLGFAIVDSENDSSWEWFFERLKEAIGTREVLV 255
Query: 82 IVSDRHRSILKVVPKVFPNAFHGICIYHLLQNLKQTYKGDLVDALYYSTAKAFNVVDFEH 141
IVSDR SI K V KVFP+A HG C+ HLL+NL +KG VDA++Y AKA+ DF +
Sbjct: 256 IVSDRKSSIPKAVEKVFPDASHGFCMQHLLRNLNSNFKGVHVDAIFYRCAKAYRKEDFGY 315
Query: 142 NMQELESEAPGIRDGLNKIGFAKWSRAFCPRRRYTVMTINISKSFNSVVLEARELPITSM 201
M++LE+ P I++ L ++G KW+ A R+RY VMT NIS+S N+V++ ARE + ++
Sbjct: 316 FMRQLEAVRPAIQNYLLQVGVEKWACAHFERKRYDVMTTNISESLNNVLMNAREYLVEAL 375
Query: 202 LEVIRMLLQRWFYERKNDADYQVTYLTKSAELKLRELIEEGRQMQVNPVNNHLYQVVSGS 261
+E R LLQRWFYER+N AD TYL+K A +LR+ + R + V P++ + Y VV G
Sbjct: 376 IEHFRSLLQRWFYERRNKADKTFTYLSKHATKRLRDREKIARCLSVQPIDINKYYVVDGL 435
Query: 262 DQFDVDLINRTCSCRIWDQLEIPCPHAYVVLSRKPLSTKDYVSAYYTNDSLRSTYSGIVH 321
VDL+ RTCSC +W E PCPHA + ++ L + S YYTN++ ++TY ++
Sbjct: 436 VGEMVDLVARTCSCLVWQADEFPCPHAIASIWKRNLDPTHFTSYYYTNNAFKATYDAAIY 495
Query: 322 PIGNEASWVIPENLKTVKIFPPNVKRAAERPKKVRIPSTME-FKRRVKCGRCGRVGHNRK 381
I N + W E + + PP KR A RP+K RI S+ E K+ VKC RC +VGHNR+
Sbjct: 496 LITNRSKWQFSEGSEVEVVLPPKFKRGAGRPRKQRIISSGEREKQSVKCSRCKQVGHNRR 555
Query: 382 TC 383
TC
Sbjct: 556 TC 557
BLAST of Lcy03g001890 vs. NCBI nr
Match:
XP_024026050.1 (uncharacterized protein LOC112092942 [Morus notabilis])
HSP 1 Score: 346.3 bits (887), Expect = 3.5e-91
Identity = 176/362 (48.62%), Postives = 237/362 (65.47%), Query Frame = 0
Query: 22 VDGTHLKNKYSGTLLAACTLDANSQIFPLGCAVVDSENDSSWQWFFLQLKFAIGDRNDFL 81
VDGT LKN++SGTLL + LDAN+ IFPLG A+VD ENDSSW+W F +LK AIG R +
Sbjct: 288 VDGTFLKNEFSGTLLLSAVLDANNHIFPLGFAIVDLENDSSWEWLFERLKEAIGTREVLV 347
Query: 82 IVSDRHRSILKVVPKVFPNAFHGICIYHLLQNLKQTYKGDLVDALYYSTAKAFNVVDFEH 141
IVSDR SI K V KVFP+A HG C++HLL+NL +KG VDA++Y AKA+ F +
Sbjct: 348 IVSDRKSSIPKAVEKVFPDASHGFCMHHLLRNLNSNFKGVHVDAIFYCCAKAYPKEVFGY 407
Query: 142 NMQELESEAPGIRDGLNKIGFAKWSRAFCPRRRYTVMTINISKSFNSVVLEARELPITSM 201
M++LE+ P I++ L ++G KW+RA R+RY VMT NIS+S N+V++ ARE P+ ++
Sbjct: 408 FMRQLEAIRPAIQNYLLQVGVEKWARAHFERKRYDVMTTNISESLNNVLVNAREYPVKAL 467
Query: 202 LEVIRMLLQRWFYERKNDADYQVTYLTKSAELKLRELIEEGRQMQVNPVNNHLYQVVSGS 261
+E R LQRWFYER+N AD TYL+K A LR+ + R + V P++ + Y VV G
Sbjct: 468 IEHFRSFLQRWFYERRNKADQTFTYLSKHATKCLRDREKIARCLSVQPIDINKYYVVDGL 527
Query: 262 DQFDVDLINRTCSCRIWDQLEIPCPHAYVVLSRKPLSTKDYVSAYYTNDSLRSTYSGIVH 321
VDL+ RTCSC +W E CPHA + ++ L + S YTN++ ++TY ++
Sbjct: 528 VGEMVDLVARTCSCLVWKADEFSCPHAIASIWKRNLDPAHFTSYDYTNNAFKATYDAAIY 587
Query: 322 PIGNEASWVIPENLKTVKIFPPNVKRAAERPKKVRIPSTME-FKRRVKCGRCGRVGHNRK 381
PI N + W I E + + P KR A RP+K RI S+ E K+ VKC RC +VGHNRK
Sbjct: 588 PITNRSKWQISEGSEVEVVLPHKFKRGARRPRKQRILSSGEREKQSVKCSRCKQVGHNRK 647
Query: 382 TC 383
TC
Sbjct: 648 TC 649
BLAST of Lcy03g001890 vs. NCBI nr
Match:
TYK09469.1 (protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa] >TYK14307.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa] >TYK15164.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa] >TYK16240.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa] >TYK20570.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa])
HSP 1 Score: 333.2 bits (853), Expect = 3.0e-87
Identity = 170/365 (46.58%), Postives = 230/365 (63.01%), Query Frame = 0
Query: 22 VDGTHLKNKYSGTLLAACTLDANSQIFPLGCAVVDSENDSSWQWFFLQLKFAIGDRNDFL 81
VDGT LK+KY GTLL A T+D N+QIFPL ++VDSEND+SW+WFF +K ++GDR D +
Sbjct: 349 VDGTFLKSKYGGTLLTASTIDGNNQIFPLAFSIVDSENDASWRWFFENIKNSLGDREDLV 408
Query: 82 IVSDRHRSILKVVPKVFPNAFHGICIYHLLQNLKQTYKGDLVDALYYSTAKAFNVVDFEH 141
++SDRH SI K V VFPNA + +C+ HLL++LK YK ++D L++ KA+ VVDFE
Sbjct: 409 VISDRHLSIPKSVHNVFPNAEYCVCLQHLLKSLKLIYKDPIIDKLFFRCGKAYTVVDFET 468
Query: 142 NMQELESEAPGIRDGLNKIGFAKWSRAFCPRRRYTVMTINISKSFNSVVLEARELPITSM 201
NM+ +ES P IRD L+K+ F KW+RA+C R+RY +MT NIS+S N+V+ E+R+LP+ ++
Sbjct: 469 NMRWMESMYPSIRDYLSKVSFEKWARAYCTRKRYQMMTTNISESLNAVLKESRDLPVAAL 528
Query: 202 LEVIRMLLQRWFYERKNDADYQVTYLTKSAELKLRELIEEGRQMQVNPVNNHLYQVVSGS 261
L+ IR +LQ WFY+R+ A T LT AE +LR + R VN +N+ +QV+ G
Sbjct: 529 LDSIRQILQNWFYDRRKVACCMRTVLTSWAEGELRIQHQNSRSFTVNAINDVEFQVIDGR 588
Query: 262 DQFDVDLINRTCSCRIWDQLEIPCPHAYVVLSRKPLSTKDYVSAYYTNDSLRSTYSGIVH 321
QF V L ++C+CR+WD EIPC HA VL +
Sbjct: 589 KQFIVRLDCKSCTCRVWDLDEIPCAHALAVLRG-------------------------LR 648
Query: 322 PIGNEASW--VIPENLKTVKIFPPNVKRAAERPKKVRIPSTMEFKRRVKCGRCGRVGHNR 381
P+GN A+W + EN I PP KR A RP+K RI S E K +C C R GHNR
Sbjct: 649 PVGNHANWKSIGIEN----NILPPTFKRRAGRPRKQRILSIGEKKSHSRCSHCHRAGHNR 684
Query: 382 KTCKF 385
+ CKF
Sbjct: 709 RNCKF 684
BLAST of Lcy03g001890 vs. NCBI nr
Match:
KAA0059897.1 (protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa])
HSP 1 Score: 332.4 bits (851), Expect = 5.2e-87
Identity = 170/365 (46.58%), Postives = 230/365 (63.01%), Query Frame = 0
Query: 22 VDGTHLKNKYSGTLLAACTLDANSQIFPLGCAVVDSENDSSWQWFFLQLKFAIGDRNDFL 81
VDGT LK+KY GTLL A T+D N+QIFPL ++VDSEND+SW+WFF +K ++GDR D +
Sbjct: 349 VDGTFLKSKYGGTLLTASTIDGNNQIFPLAFSIVDSENDASWRWFFENIKNSLGDREDLV 408
Query: 82 IVSDRHRSILKVVPKVFPNAFHGICIYHLLQNLKQTYKGDLVDALYYSTAKAFNVVDFEH 141
++SDRH SI K V VFPNA + +C+ HLL++LK YK ++D L++ KA+ VVDFE
Sbjct: 409 VISDRHLSIPKSVHNVFPNAEYCVCLQHLLKSLKLIYKDPIIDKLFFRCGKAYTVVDFET 468
Query: 142 NMQELESEAPGIRDGLNKIGFAKWSRAFCPRRRYTVMTINISKSFNSVVLEARELPITSM 201
NM+ +ES P IRD L+K+ F KW+RA+C R+RY +MT NIS+S N+V+ E+R+LP+ ++
Sbjct: 469 NMRWMESMYPSIRDYLSKVSFEKWARAYCTRKRYQMMTTNISESLNAVLKESRDLPVAAL 528
Query: 202 LEVIRMLLQRWFYERKNDADYQVTYLTKSAELKLRELIEEGRQMQVNPVNNHLYQVVSGS 261
L+ IR +LQ WFY+R+ A T LT AE +LR + R VN +N+ +QV+ G
Sbjct: 529 LDSIRQILQNWFYDRRKVACCMRTVLTSWAEGELRIQHQNSRSFTVNAINDVEFQVIDGR 588
Query: 262 DQFDVDLINRTCSCRIWDQLEIPCPHAYVVLSRKPLSTKDYVSAYYTNDSLRSTYSGIVH 321
QF V L ++C+CR+WD EIPC HA VL +
Sbjct: 589 KQFIVRLDCKSCTCRVWDLDEIPCAHALAVLRG-------------------------LR 648
Query: 322 PIGNEASW--VIPENLKTVKIFPPNVKRAAERPKKVRIPSTMEFKRRVKCGRCGRVGHNR 381
P+GN A+W + EN I PP KR A RP+K RI S E K +C C R GHNR
Sbjct: 649 PVGNHANWKSIGIEN----NILPPTFKRRAGRPRKQRILSIGEKKIHSRCSHCHRAGHNR 684
Query: 382 KTCKF 385
+ CKF
Sbjct: 709 RNCKF 684
BLAST of Lcy03g001890 vs. TAIR 10
Match:
AT1G64260.1 (MuDR family transposase )
HSP 1 Score: 114.0 bits (284), Expect = 2.7e-25
Identity = 82/341 (24.05%), Postives = 148/341 (43.40%), Query Frame = 0
Query: 21 IVDGTHLKNKYSGTLLAACTLDANSQIFPLGCAVVDSENDSSWQWFFLQLKFAIGDRNDF 80
+VD L KY L+ A +DA ++ FPL AV + SW+WFF +++ + R D
Sbjct: 380 VVDTKSLNGKYQLKLMIASGVDAANKFFPLAFAVTKEVSTDSWRWFFTKIREKVTQRKDL 439
Query: 81 LIVSDRHRSILKVVPK-----VFPNAFHGICIYHLLQNLKQTYKGDLVDALYYSTAKAFN 140
++S R I+ VV + P A H C+ HL ++ +++L
Sbjct: 440 CLISSPLRDIVAVVNEPGSLWQEPWAHHKFCLNHLRSQFLGVFRDYNLESLVEQAGSTNQ 499
Query: 141 VVDFEHNMQELESEAPGIRDGLNKIGFAKWSRAFCPRRRYTVMTINISKSFNSVVLEARE 200
+F+ M +++ + P L++I KW+ A RY ++ I+ F R
Sbjct: 500 KEEFDSYMNDIKEKNPEAWKWLDQIPRHKWALAHDSGLRYGIIEIDREALF----AVCRG 559
Query: 201 LPITSMLEVIRMLLQRWFYERKNDADYQVTYLTKSAEL----------KLRELIEEGRQM 260
P ++ ++L F E ++ D ++ + S KL E + +
Sbjct: 560 FPYCTVAMTGGVMLM--FDELRSSFDKSLSSIYSSLNRGVVYTEPFMDKLEEFMTDSIPY 619
Query: 261 QVNPVNNHLYQVVSGS--DQFDVDLINRTCSCRIWDQLEIPCPHAYVVLSRKPLSTKDYV 320
+ + ++V S +++ V L TC+CR + + PC HA V + ++ YV
Sbjct: 620 VITQLERDSFKVSESSEKEEWIVQLNVSTCTCRKFQSYKFPCLHALAVFEKLKINPLQYV 679
Query: 321 SAYYTNDSLRSTYSGIVHPIGNEASWVIPENLKTVKIFPPN 345
YT + TY+ P+ + A+W PE+ + +FPP+
Sbjct: 680 DECYTVEQYCKTYAATFSPVPDVAAW--PEDCRVPTLFPPS 712
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1C328 | 3.9e-96 | 55.65 | uncharacterized protein LOC111006994 OS=Momordica charantia OX=3673 GN=LOC111006... | [more] |
A0A5D3DAW8 | 1.5e-87 | 46.58 | Protein FAR1-RELATED SEQUENCE 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E... | [more] |
A0A5A7T3G5 | 2.5e-87 | 46.58 | Protein FAR1-RELATED SEQUENCE 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E... | [more] |
A0A5A7UZ18 | 2.5e-87 | 46.58 | Protein FAR1-RELATED SEQUENCE 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E... | [more] |
A0A5A7VG38 | 5.6e-87 | 46.58 | Protein FAR1-RELATED SEQUENCE 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E... | [more] |
Match Name | E-value | Identity | Description | |
XP_022134813.1 | 8.0e-96 | 55.65 | uncharacterized protein LOC111006994 [Momordica charantia] | [more] |
XP_024030312.1 | 7.0e-92 | 48.62 | uncharacterized protein LOC112094204 [Morus notabilis] | [more] |
XP_024026050.1 | 3.5e-91 | 48.62 | uncharacterized protein LOC112092942 [Morus notabilis] | [more] |
TYK09469.1 | 3.0e-87 | 46.58 | protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa] >TYK14307.1 prot... | [more] |
KAA0059897.1 | 5.2e-87 | 46.58 | protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
AT1G64260.1 | 2.7e-25 | 24.05 | MuDR family transposase | [more] |