Lcy03g001770 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy03g001770
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	leucine-rich repeat extensin-like protein 4
Location	Chr03: 6209100 .. 6209853 (+)
RNA-Seq Expression	Lcy03g001770
Synteny	Lcy03g001770

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTCCATTTTTCCTCTCTCCTCCTTCTCATTTGCTTGCTTCTCGACCGCTTGACCTTAAGCTCCTCATCCTCGATTCCCCTTCCCCTACTGAAATACCTACTGAAATCATCACTCATCTTCATAAAATACCTACTGAAATCCCACTCCCTTCTTCACTCCAACAAAACAAAACATAACCCACTTTCTTTTCCCTTTCAGATGCCTCATTCCAAATGAATCCCAACTCCAATTTCATCTTATTTTTCAACCTCTCCCTCCTCCTCCTCCTCCGCCTCGCCGCCGCCCTCCCCACCGTCGGCCATGGTGCCCTCTCCGACACCGAAGCTCTCTACATCTGCCACCGCCAGCTTCTCTACTACAGAGACGAGTTCGGCGACCGTGGAGAGCATGTCACCGTCGACCCATCTCTCGTCTTCGAAAATGAAAGGACCAGAAACGCCTACATTGCGCTTCAGGCTTGGAAACTCGCCACTTTGTCTGACCCTCTGAATCAAACCGTCAATTGGCTCGGATCTGATGTCTGCAGCTACACCGGCGTCTACTGTGCTCCTACATTGGACAATCCCAAGATCCGCACCGTCGCCGGAATCGATCTCAACCACGGCGACATTGTCGGATACCTCCCCAAAGAGCTCGGTTCATCTTCCAAATCGAGCCCACCCCCTTCTCACTGCCGCCGCCTTCTGATTACAGGGTGTTGAATGAACCAAAACCCAGTTCATAAATCGCTCAATCCCAGTGCCTTTAGTGGAT

mRNA sequence

GCTCCATTTTTCCTCTCTCCTCCTTCTCATTTGCTTGCTTCTCGACCGCTTGACCTTAAGCTCCTCATCCTCGATTCCCCTTCCCCTACTGAAATACCTACTGAAATCATCACTCATCTTCATAAAATACCTACTGAAATCCCACTCCCTTCTTCACTCCAACAAAACAAAACATAACCCACTTTCTTTTCCCTTTCAGATGCCTCATTCCAAATGAATCCCAACTCCAATTTCATCTTATTTTTCAACCTCTCCCTCCTCCTCCTCCTCCGCCTCGCCGCCGCCCTCCCCACCGTCGGCCATGGTGCCCTCTCCGACACCGAAGCTCTCTACATCTGCCACCGCCAGCTTCTCTACTACAGAGACGAGTTCGGCGACCGTGGAGAGCATGTCACCGTCGACCCATCTCTCGTCTTCGAAAATGAAAGGACCAGAAACGCCTACATTGCGCTTCAGGCTTGGAAACTCGCCACTTTGTCTGACCCTCTGAATCAAACCGTCAATTGGCTCGGATCTGATGTCTGCAGCTACACCGGCGTCTACTGTGCTCCTACATTGGACAATCCCAAGATCCGCACCGTCGCCGGAATCGATCTCAACCACGGCGACATTGTCGGATACCTCCCCAAAGAGCTCGGTTCATCTTCCAAATCGAGCCCACCCCCTTCTCACTGCCGCCGCCTTCTGATTACAGGGTGTTGAATGAACCAAAACCCAGTTCATAAATCGCTCAATCCCAGTGCCTTTAGTGGAT

Coding sequence (CDS)

ATGAATCCCAACTCCAATTTCATCTTATTTTTCAACCTCTCCCTCCTCCTCCTCCTCCGCCTCGCCGCCGCCCTCCCCACCGTCGGCCATGGTGCCCTCTCCGACACCGAAGCTCTCTACATCTGCCACCGCCAGCTTCTCTACTACAGAGACGAGTTCGGCGACCGTGGAGAGCATGTCACCGTCGACCCATCTCTCGTCTTCGAAAATGAAAGGACCAGAAACGCCTACATTGCGCTTCAGGCTTGGAAACTCGCCACTTTGTCTGACCCTCTGAATCAAACCGTCAATTGGCTCGGATCTGATGTCTGCAGCTACACCGGCGTCTACTGTGCTCCTACATTGGACAATCCCAAGATCCGCACCGTCGCCGGAATCGATCTCAACCACGGCGACATTGTCGGATACCTCCCCAAAGAGCTCGGTTCATCTTCCAAATCGAGCCCACCCCCTTCTCACTGCCGCCGCCTTCTGATTACAGGGTGTTGA

Protein sequence

MNPNSNFILFFNLSLLLLLRLAAALPTVGHGALSDTEALYICHRQLLYYRDEFGDRGEHVTVDPSLVFENERTRNAYIALQAWKLATLSDPLNQTVNWLGSDVCSYTGVYCAPTLDNPKIRTVAGIDLNHGDIVGYLPKELGSSSKSSPPPSHCRRLLITGC

Homology

[Close]

BLAST of Lcy03g001770 vs. ExPASy Swiss-Prot
Match: Q9SN46 (Leucine-rich repeat extensin-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=LRX5 PE=2 SV=2)

HSP 1 Score: 188.0 bits (476), Expect = 8.6e-47
Identity = 92/142 (64.79%), Postives = 103/142 (72.54%), Query Frame = 0


Query: 1   MNPNSNFILFFNLSLLLLLRLAAALPTVGHGALSDTEALYICHRQLLYYRDEFGDRGEHV 60
           M  N++ I            ++ +L    +G LSD E   I  RQLLY+RDEFGDRGE+V
Sbjct: 6   MMKNTSLIFVLLFITFFFTSISYSLSLTFNGDLSDNEVRLITQRQLLYFRDEFGDRGENV 65

Query: 61  TVDPSLVFENERTRNAYIALQAWKLATLSDPLNQTVNWLGSDVCSYTGVYCAPTLDNPKI 120
            VDPSLVFEN R RNAYIALQAWK A LSDP N T NW+GSDVCSYTGVYCAP LDN +I
Sbjct: 66  DVDPSLVFENPRLRNAYIALQAWKQAILSDPNNFTTNWIGSDVCSYTGVYCAPALDNRRI 125

Query: 121 RTVAGIDLNHGDIVGYLPKELG 143
           RTVAGIDLNH DI GYLP+ELG
Sbjct: 126 RTVAGIDLNHADIAGYLPQELG 147

[Close]

BLAST of Lcy03g001770 vs. ExPASy Swiss-Prot
Match: Q9LHF1 (Leucine-rich repeat extensin-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=LRX4 PE=1 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 3.3e-46
Identity = 89/141 (63.12%), Postives = 105/141 (74.47%), Query Frame = 0


Query: 2   NPNSNFILFFNLSLLLLLRLAAALPTVGHGALSDTEALYICHRQLLYYRDEFGDRGEHVT 61
           N  +  +L   L       ++ +L    +  LSDTE  +I  RQLLYYRDEFGDRGE+VT
Sbjct: 3   NNTTQSLLLLLLFFFFFFEISHSLSISSNAPLSDTEVRFIQRRQLLYYRDEFGDRGENVT 62

Query: 62  VDPSLVFENERTRNAYIALQAWKLATLSDPLNQTVNWLGSDVCSYTGVYCAPTLDNPKIR 121
           VDPSL+FEN R R+AYIALQAWK A LSDP N TVNW+GS+VC+YTGV+C+  LDN KIR
Sbjct: 63  VDPSLIFENPRLRSAYIALQAWKQAILSDPNNITVNWIGSNVCNYTGVFCSKALDNRKIR 122

Query: 122 TVAGIDLNHGDIVGYLPKELG 143
           TVAGIDLNH DI GYLP+ELG
Sbjct: 123 TVAGIDLNHADIAGYLPEELG 143

[Close]

BLAST of Lcy03g001770 vs. ExPASy Swiss-Prot
Match: Q9T0K5 (Leucine-rich repeat extensin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=LRX3 PE=1 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 4.3e-38
Identity = 85/142 (59.86%), Postives = 99/142 (69.72%), Query Frame = 0


Query: 1   MNPNSNFILFFNLSLLLLLRLAAALPTVGHGALSDTEALYICHRQLLYYRDEFGDRGEHV 60
           M      +LFF    L+ L  A ++ + G G LSD E  +I  RQLL    EF +R   +
Sbjct: 1   MKKTIQILLFF--FFLINLTNALSISSDG-GVLSDNEVRHIQRRQLL----EFAERSVKI 60

Query: 61  TVDPSLVFENERTRNAYIALQAWKLATLSDPLNQTVNWLGSDVCSYTGVYCAPTLDNPKI 120
           TVDPSL FEN R RNAYIALQAWK A LSDP N T NW+GS+VC+YTGV+C+P LDN KI
Sbjct: 61  TVDPSLNFENPRLRNAYIALQAWKQAILSDPNNFTSNWIGSNVCNYTGVFCSPALDNRKI 120

Query: 121 RTVAGIDLNHGDIVGYLPKELG 143
           RTVAGIDLNH DI GYLP+ELG
Sbjct: 121 RTVAGIDLNHADIAGYLPEELG 135

[Close]

BLAST of Lcy03g001770 vs. ExPASy Swiss-Prot
Match: Q9LJ64 (Pollen-specific leucine-rich repeat extensin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=PEX1 PE=1 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 2.1e-29
Identity = 71/142 (50.00%), Postives = 85/142 (59.86%), Query Frame = 0


Query: 3   PNSNFILFFNLSLLLLLRLAAALPTVGHGALSDTEALYICHRQLLYYRDEFGDRGEHV-- 62
           P   F+L F  ++ +    AA        AL+D EA ++  RQLL    E GD  + +  
Sbjct: 9   PFGCFLLLFCFTISIFFYSAA--------ALTDEEASFLTRRQLLAL-SENGDLPDDIEY 68

Query: 63  TVDPSLVFENERTRNAYIALQAWKLATLSDPLNQTVNWLGSDVCSYTGVYCAPTLDNPKI 122
            VD  L F N R + AYIALQAWK A  SDP N   NW+G DVCSY GV+CAP LD+P +
Sbjct: 69  EVDLDLKFANNRLKRAYIALQAWKKAFYSDPFNTAANWVGPDVCSYKGVFCAPALDDPSV 128

Query: 123 RTVAGIDLNHGDIVGYLPKELG 143
             VAGIDLNH DI GYLP ELG
Sbjct: 129 LVVAGIDLNHADIAGYLPPELG 141

[Close]

BLAST of Lcy03g001770 vs. ExPASy Swiss-Prot
Match: O48809 (Leucine-rich repeat extensin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=LRX2 PE=1 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 6.2e-29
Identity = 58/101 (57.43%), Postives = 70/101 (69.31%), Query Frame = 0


Query: 42  CHRQLLYYRDEFGDRGEHVTVDPSLVFENERTRNAYIALQAWKLATLSDPLNQTVNWLGS 101
           C  Q+    D+     +++ VDPSL FEN   R AYIALQ+WK A  SDP N T NW GS
Sbjct: 22  CFLQIRGDDDDDDISDDNIKVDPSLKFENPSLRQAYIALQSWKQAIFSDPFNFTANWNGS 81

Query: 102 DVCSYTGVYCAPTLDNPKIRTVAGIDLNHGDIVGYLPKELG 143
           DVCSY G++CAP+  +PK R VAGIDLNH D+ GYLP+ELG
Sbjct: 82  DVCSYNGIFCAPSPSSPKTRVVAGIDLNHADMAGYLPRELG 122

[Close]

BLAST of Lcy03g001770 vs. ExPASy TrEMBL
Match: A0A6J1JHC7 (leucine-rich repeat extensin-like protein 4 OS=Cucurbita maxima OX=3661 GN=LOC111485114 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 6.6e-58
Identity = 116/145 (80.00%), Postives = 122/145 (84.14%), Query Frame = 0


Query: 1   MNPNSNFILFFNLSLLLL---LRLAAALPTVGHGALSDTEALYICHRQLLYYRDEFGDRG 60
           MNPNS+F +   L LL L   LRLAAALP V HG+LSD EALYI HRQLLYYRDEFGDRG
Sbjct: 1   MNPNSHFNISPLLLLLFLPAFLRLAAALPAVSHGSLSDAEALYIRHRQLLYYRDEFGDRG 60

Query: 61  EHVTVDPSLVFENERTRNAYIALQAWKLATLSDPLNQTVNWLGSDVCSYTGVYCAPTLDN 120
           E VTVDPSLVFEN R RNAYIALQAWKLA LSDP NQT NW+GSDVCSY GVYCAP LD+
Sbjct: 61  EEVTVDPSLVFENGRIRNAYIALQAWKLAILSDPFNQTANWVGSDVCSYFGVYCAPALDD 120

Query: 121 PKIRTVAGIDLNHGDIVGYLPKELG 143
           P IRTVAGIDLNHGDI GYLP+ELG
Sbjct: 121 PNIRTVAGIDLNHGDIAGYLPEELG 145

[Close]

BLAST of Lcy03g001770 vs. ExPASy TrEMBL
Match: A0A6J1F4V8 (leucine-rich repeat extensin-like protein 4 OS=Cucurbita moschata OX=3662 GN=LOC111440888 PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 5.6e-57
Identity = 116/138 (84.06%), Postives = 120/138 (86.96%), Query Frame = 0


Query: 6   NFILFFNLS-LLLLLRLAAALPTVGHGALSDTEALYICHRQLLYYRDEFGDRGEHVTVDP 65
           NF    NLS LLLLLRLAAA  TVGHG+LSD EALYI  RQLLYYRDEFGDRGE VTVDP
Sbjct: 2   NFNSILNLSLLLLLLRLAAA--TVGHGSLSDAEALYIRQRQLLYYRDEFGDRGEEVTVDP 61

Query: 66  SLVFENERTRNAYIALQAWKLATLSDPLNQTVNWLGSDVCSYTGVYCAPTLDNPKIRTVA 125
           SLVFENER RNAYIALQAWKLA LSDPL QT NW+GSDVC+YTGVYCAP LDNP IRTVA
Sbjct: 62  SLVFENERIRNAYIALQAWKLAILSDPLKQTANWVGSDVCTYTGVYCAPALDNPNIRTVA 121

Query: 126 GIDLNHGDIVGYLPKELG 143
           GIDLNHGDI GYLP+ELG
Sbjct: 122 GIDLNHGDIAGYLPEELG 137

[Close]

BLAST of Lcy03g001770 vs. ExPASy TrEMBL
Match: A0A6J1HAF9 (leucine-rich repeat extensin-like protein 4 OS=Cucurbita moschata OX=3662 GN=LOC111461571 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 7.3e-57
Identity = 114/145 (78.62%), Postives = 120/145 (82.76%), Query Frame = 0


Query: 1   MNPNSNFILFFNLSLLLL---LRLAAALPTVGHGALSDTEALYICHRQLLYYRDEFGDRG 60
           MNPNS+F +   L LL L   LRL  ALP V HG+LSD EALYI HRQLLYYRDEFGDRG
Sbjct: 1   MNPNSHFNISPLLLLLFLPAFLRLPTALPAVSHGSLSDAEALYIRHRQLLYYRDEFGDRG 60

Query: 61  EHVTVDPSLVFENERTRNAYIALQAWKLATLSDPLNQTVNWLGSDVCSYTGVYCAPTLDN 120
           E VTVDPSLVFEN R RNAYIALQAWKLA LSDP NQT NW+GSDVCSY GVYCAP LD+
Sbjct: 61  EEVTVDPSLVFENGRIRNAYIALQAWKLAILSDPFNQTANWVGSDVCSYFGVYCAPALDD 120

Query: 121 PKIRTVAGIDLNHGDIVGYLPKELG 143
           P IRTVAGIDLNHGDI GYLP+ELG
Sbjct: 121 PNIRTVAGIDLNHGDIAGYLPEELG 145

[Close]

BLAST of Lcy03g001770 vs. ExPASy TrEMBL
Match: A0A6J1KXW2 (leucine-rich repeat extensin-like protein 4 OS=Cucurbita maxima OX=3661 GN=LOC111499732 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 2.8e-56
Identity = 114/140 (81.43%), Postives = 117/140 (83.57%), Query Frame = 0


Query: 6   NFILFFNLS---LLLLLRLAAALPTVGHGALSDTEALYICHRQLLYYRDEFGDRGEHVTV 65
           NF   FNLS   LLLLLRL  A  TV HG LSD EALYI  RQLLYYRDEFGDRGE VTV
Sbjct: 2   NFNSIFNLSLLLLLLLLRLRLAAATVAHGTLSDAEALYIRQRQLLYYRDEFGDRGEEVTV 61

Query: 66  DPSLVFENERTRNAYIALQAWKLATLSDPLNQTVNWLGSDVCSYTGVYCAPTLDNPKIRT 125
           DPSLVFENER RNAYIALQAWKLA LSDPLNQT NW+GSDVC+YTGVYCA  LDNP IRT
Sbjct: 62  DPSLVFENERIRNAYIALQAWKLAILSDPLNQTANWVGSDVCTYTGVYCASALDNPTIRT 121

Query: 126 VAGIDLNHGDIVGYLPKELG 143
           VAGIDLNHGDI GYLP+ELG
Sbjct: 122 VAGIDLNHGDIAGYLPEELG 141

[Close]

BLAST of Lcy03g001770 vs. ExPASy TrEMBL
Match: A0A0A0LWK1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G383520 PE=4 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 2.9e-53
Identity = 108/142 (76.06%), Postives = 118/142 (83.10%), Query Frame = 0


Query: 1   MNPNSNFILFFNLSLLLLLRLAAALPTVGHGALSDTEALYICHRQLLYYRDEFGDRGEHV 60
           MNP S+F   F  SLLL L  A       HG+LSD EAL+I HRQLLYYRDEFGDRGE V
Sbjct: 1   MNPKSHFNSLFLFSLLLHLFAA-------HGSLSDAEALFIRHRQLLYYRDEFGDRGELV 60

Query: 61  TVDPSLVFENERTRNAYIALQAWKLATLSDPLNQTVNWLGSDVCSYTGVYCAPTLDNPKI 120
           TVDPSLVFEN+R RNAYIALQAWKLA LSDPLNQT NW+GS+VC+Y GV+CAP+LDNPKI
Sbjct: 61  TVDPSLVFENDRIRNAYIALQAWKLAILSDPLNQTANWVGSNVCNYFGVFCAPSLDNPKI 120

Query: 121 RTVAGIDLNHGDIVGYLPKELG 143
           RTVAGIDLNHGDI GYLP+ELG
Sbjct: 121 RTVAGIDLNHGDIAGYLPEELG 135

[Close]

BLAST of Lcy03g001770 vs. NCBI nr
Match: XP_022987605.1 (leucine-rich repeat extensin-like protein 4 [Cucurbita maxima])

HSP 1 Score: 233.4 bits (594), Expect = 1.4e-57
Identity = 116/145 (80.00%), Postives = 122/145 (84.14%), Query Frame = 0


Query: 1   MNPNSNFILFFNLSLLLL---LRLAAALPTVGHGALSDTEALYICHRQLLYYRDEFGDRG 60
           MNPNS+F +   L LL L   LRLAAALP V HG+LSD EALYI HRQLLYYRDEFGDRG
Sbjct: 1   MNPNSHFNISPLLLLLFLPAFLRLAAALPAVSHGSLSDAEALYIRHRQLLYYRDEFGDRG 60

Query: 61  EHVTVDPSLVFENERTRNAYIALQAWKLATLSDPLNQTVNWLGSDVCSYTGVYCAPTLDN 120
           E VTVDPSLVFEN R RNAYIALQAWKLA LSDP NQT NW+GSDVCSY GVYCAP LD+
Sbjct: 61  EEVTVDPSLVFENGRIRNAYIALQAWKLAILSDPFNQTANWVGSDVCSYFGVYCAPALDD 120

Query: 121 PKIRTVAGIDLNHGDIVGYLPKELG 143
           P IRTVAGIDLNHGDI GYLP+ELG
Sbjct: 121 PNIRTVAGIDLNHGDIAGYLPEELG 145

[Close]

BLAST of Lcy03g001770 vs. NCBI nr
Match: XP_023531535.1 (leucine-rich repeat extensin-like protein 4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 232.3 bits (591), Expect = 3.0e-57
Identity = 117/138 (84.78%), Postives = 120/138 (86.96%), Query Frame = 0


Query: 6   NFILFFNLS-LLLLLRLAAALPTVGHGALSDTEALYICHRQLLYYRDEFGDRGEHVTVDP 65
           NF    NLS LLLLLRLAAA  TVGHG LSD EALYI  RQLLYYRDEFGDRGE VTVDP
Sbjct: 2   NFNSILNLSLLLLLLRLAAA--TVGHGTLSDAEALYIRQRQLLYYRDEFGDRGEEVTVDP 61

Query: 66  SLVFENERTRNAYIALQAWKLATLSDPLNQTVNWLGSDVCSYTGVYCAPTLDNPKIRTVA 125
           SLVFENER RNAYIALQAWKLA LSDPLNQT NW+GSDVC+YTGVYCAP LDNP IRTVA
Sbjct: 62  SLVFENERIRNAYIALQAWKLAILSDPLNQTANWVGSDVCTYTGVYCAPALDNPNIRTVA 121

Query: 126 GIDLNHGDIVGYLPKELG 143
           GIDLNHGDI GYLP+ELG
Sbjct: 122 GIDLNHGDIAGYLPEELG 137

[Close]

BLAST of Lcy03g001770 vs. NCBI nr
Match: KAG6587943.1 (Leucine-rich repeat extensin-like protein 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 231.9 bits (590), Expect = 4.0e-57
Identity = 117/138 (84.78%), Postives = 121/138 (87.68%), Query Frame = 0


Query: 6   NFILFFNLS-LLLLLRLAAALPTVGHGALSDTEALYICHRQLLYYRDEFGDRGEHVTVDP 65
           NF    NLS LLLLLRLAAA  TVGHG+LSD EALYI  RQLLYYRDEFGDRGE VTVDP
Sbjct: 2   NFNSISNLSLLLLLLRLAAA--TVGHGSLSDAEALYIRQRQLLYYRDEFGDRGEEVTVDP 61

Query: 66  SLVFENERTRNAYIALQAWKLATLSDPLNQTVNWLGSDVCSYTGVYCAPTLDNPKIRTVA 125
           SLVFENER RNAYIALQAWKLA LSDPLNQT NW+GSDVC+YTGVYCAP LDNP IRTVA
Sbjct: 62  SLVFENERIRNAYIALQAWKLAILSDPLNQTANWVGSDVCTYTGVYCAPALDNPNIRTVA 121

Query: 126 GIDLNHGDIVGYLPKELG 143
           GIDLNHGDI GYLP+ELG
Sbjct: 122 GIDLNHGDIAGYLPEELG 137

[Close]

BLAST of Lcy03g001770 vs. NCBI nr
Match: XP_023515643.1 (leucine-rich repeat extensin-like protein 4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 230.3 bits (586), Expect = 1.2e-56
Identity = 115/145 (79.31%), Postives = 121/145 (83.45%), Query Frame = 0


Query: 1   MNPNSNFILFFNLSLLLL---LRLAAALPTVGHGALSDTEALYICHRQLLYYRDEFGDRG 60
           MNPNS+F +   L LL L   LRLAAALP V HG+LSD EALYI  RQLLYYRDEFGDRG
Sbjct: 1   MNPNSHFNISPLLLLLFLPTFLRLAAALPAVSHGSLSDAEALYIRRRQLLYYRDEFGDRG 60

Query: 61  EHVTVDPSLVFENERTRNAYIALQAWKLATLSDPLNQTVNWLGSDVCSYTGVYCAPTLDN 120
           E VTVDPSLVFEN R RNAYIALQAWKLA LSDP NQT NW+GSDVCSY GVYCAP LD+
Sbjct: 61  EEVTVDPSLVFENGRIRNAYIALQAWKLAILSDPFNQTANWVGSDVCSYFGVYCAPALDD 120

Query: 121 PKIRTVAGIDLNHGDIVGYLPKELG 143
           P IRTVAGIDLNHGDI GYLP+ELG
Sbjct: 121 PNIRTVAGIDLNHGDIAGYLPEELG 145

[Close]

BLAST of Lcy03g001770 vs. NCBI nr
Match: XP_022933483.1 (leucine-rich repeat extensin-like protein 4 [Cucurbita moschata])

HSP 1 Score: 230.3 bits (586), Expect = 1.2e-56
Identity = 116/138 (84.06%), Postives = 120/138 (86.96%), Query Frame = 0


Query: 6   NFILFFNLS-LLLLLRLAAALPTVGHGALSDTEALYICHRQLLYYRDEFGDRGEHVTVDP 65
           NF    NLS LLLLLRLAAA  TVGHG+LSD EALYI  RQLLYYRDEFGDRGE VTVDP
Sbjct: 2   NFNSILNLSLLLLLLRLAAA--TVGHGSLSDAEALYIRQRQLLYYRDEFGDRGEEVTVDP 61

Query: 66  SLVFENERTRNAYIALQAWKLATLSDPLNQTVNWLGSDVCSYTGVYCAPTLDNPKIRTVA 125
           SLVFENER RNAYIALQAWKLA LSDPL QT NW+GSDVC+YTGVYCAP LDNP IRTVA
Sbjct: 62  SLVFENERIRNAYIALQAWKLAILSDPLKQTANWVGSDVCTYTGVYCAPALDNPNIRTVA 121

Query: 126 GIDLNHGDIVGYLPKELG 143
           GIDLNHGDI GYLP+ELG
Sbjct: 122 GIDLNHGDIAGYLPEELG 137

[Close]

BLAST of Lcy03g001770 vs. TAIR 10
Match: AT4G18670.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 188.0 bits (476), Expect = 6.1e-48
Identity = 92/142 (64.79%), Postives = 103/142 (72.54%), Query Frame = 0


Query: 1   MNPNSNFILFFNLSLLLLLRLAAALPTVGHGALSDTEALYICHRQLLYYRDEFGDRGEHV 60
           M  N++ I            ++ +L    +G LSD E   I  RQLLY+RDEFGDRGE+V
Sbjct: 6   MMKNTSLIFVLLFITFFFTSISYSLSLTFNGDLSDNEVRLITQRQLLYFRDEFGDRGENV 65

Query: 61  TVDPSLVFENERTRNAYIALQAWKLATLSDPLNQTVNWLGSDVCSYTGVYCAPTLDNPKI 120
            VDPSLVFEN R RNAYIALQAWK A LSDP N T NW+GSDVCSYTGVYCAP LDN +I
Sbjct: 66  DVDPSLVFENPRLRNAYIALQAWKQAILSDPNNFTTNWIGSDVCSYTGVYCAPALDNRRI 125

Query: 121 RTVAGIDLNHGDIVGYLPKELG 143
           RTVAGIDLNH DI GYLP+ELG
Sbjct: 126 RTVAGIDLNHADIAGYLPQELG 147

[Close]

BLAST of Lcy03g001770 vs. TAIR 10
Match: AT3G24480.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 186.0 bits (471), Expect = 2.3e-47
Identity = 89/141 (63.12%), Postives = 105/141 (74.47%), Query Frame = 0


Query: 2   NPNSNFILFFNLSLLLLLRLAAALPTVGHGALSDTEALYICHRQLLYYRDEFGDRGEHVT 61
           N  +  +L   L       ++ +L    +  LSDTE  +I  RQLLYYRDEFGDRGE+VT
Sbjct: 3   NNTTQSLLLLLLFFFFFFEISHSLSISSNAPLSDTEVRFIQRRQLLYYRDEFGDRGENVT 62

Query: 62  VDPSLVFENERTRNAYIALQAWKLATLSDPLNQTVNWLGSDVCSYTGVYCAPTLDNPKIR 121
           VDPSL+FEN R R+AYIALQAWK A LSDP N TVNW+GS+VC+YTGV+C+  LDN KIR
Sbjct: 63  VDPSLIFENPRLRSAYIALQAWKQAILSDPNNITVNWIGSNVCNYTGVFCSKALDNRKIR 122

Query: 122 TVAGIDLNHGDIVGYLPKELG 143
           TVAGIDLNH DI GYLP+ELG
Sbjct: 123 TVAGIDLNHADIAGYLPEELG 143

[Close]

BLAST of Lcy03g001770 vs. TAIR 10
Match: AT4G13340.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 159.1 bits (401), Expect = 3.1e-39
Identity = 85/142 (59.86%), Postives = 99/142 (69.72%), Query Frame = 0


Query: 1   MNPNSNFILFFNLSLLLLLRLAAALPTVGHGALSDTEALYICHRQLLYYRDEFGDRGEHV 60
           M      +LFF    L+ L  A ++ + G G LSD E  +I  RQLL    EF +R   +
Sbjct: 1   MKKTIQILLFF--FFLINLTNALSISSDG-GVLSDNEVRHIQRRQLL----EFAERSVKI 60

Query: 61  TVDPSLVFENERTRNAYIALQAWKLATLSDPLNQTVNWLGSDVCSYTGVYCAPTLDNPKI 120
           TVDPSL FEN R RNAYIALQAWK A LSDP N T NW+GS+VC+YTGV+C+P LDN KI
Sbjct: 61  TVDPSLNFENPRLRNAYIALQAWKQAILSDPNNFTSNWIGSNVCNYTGVFCSPALDNRKI 120

Query: 121 RTVAGIDLNHGDIVGYLPKELG 143
           RTVAGIDLNH DI GYLP+ELG
Sbjct: 121 RTVAGIDLNHADIAGYLPEELG 135

[Close]

BLAST of Lcy03g001770 vs. TAIR 10
Match: AT3G19020.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 130.2 bits (326), Expect = 1.5e-30
Identity = 71/142 (50.00%), Postives = 85/142 (59.86%), Query Frame = 0


Query: 3   PNSNFILFFNLSLLLLLRLAAALPTVGHGALSDTEALYICHRQLLYYRDEFGDRGEHV-- 62
           P   F+L F  ++ +    AA        AL+D EA ++  RQLL    E GD  + +  
Sbjct: 9   PFGCFLLLFCFTISIFFYSAA--------ALTDEEASFLTRRQLLAL-SENGDLPDDIEY 68

Query: 63  TVDPSLVFENERTRNAYIALQAWKLATLSDPLNQTVNWLGSDVCSYTGVYCAPTLDNPKI 122
            VD  L F N R + AYIALQAWK A  SDP N   NW+G DVCSY GV+CAP LD+P +
Sbjct: 69  EVDLDLKFANNRLKRAYIALQAWKKAFYSDPFNTAANWVGPDVCSYKGVFCAPALDDPSV 128

Query: 123 RTVAGIDLNHGDIVGYLPKELG 143
             VAGIDLNH DI GYLP ELG
Sbjct: 129 LVVAGIDLNHADIAGYLPPELG 141

[Close]

BLAST of Lcy03g001770 vs. TAIR 10
Match: AT1G12040.1 (leucine-rich repeat/extensin 1 )

HSP 1 Score: 128.3 bits (321), Expect = 5.8e-30
Identity = 58/102 (56.86%), Postives = 67/102 (65.69%), Query Frame = 0


Query: 41  ICHRQLLYYRDEFGDRGEHVTVDPSLVFENERTRNAYIALQAWKLATLSDPLNQTVNWLG 100
           +C  Q+    D+  D G  + VD  L FEN + R AYIALQ+WK A  SDP N T NW G
Sbjct: 19  VCFLQIKADHDDESDLGSDIKVDKRLKFENPKLRQAYIALQSWKKAIFSDPFNFTANWNG 78

Query: 101 SDVCSYTGVYCAPTLDNPKIRTVAGIDLNHGDIVGYLPKELG 143
           SDVCSY G+YCAP+   PK R VAGIDLNH D+ GYL  ELG
Sbjct: 79  SDVCSYNGIYCAPSPSYPKTRVVAGIDLNHADMAGYLASELG 120

The following BLAST results are available for this feature:

BLAST of Lcy03g001770 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SN46	8.6e-47	64.79	Leucine-rich repeat extensin-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=L...	[more]
Q9LHF1	3.3e-46	63.12	Leucine-rich repeat extensin-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=L...	[more]
Q9T0K5	4.3e-38	59.86	Leucine-rich repeat extensin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=L...	[more]
Q9LJ64	2.1e-29	50.00	Pollen-specific leucine-rich repeat extensin-like protein 1 OS=Arabidopsis thali...	[more]
O48809	6.2e-29	57.43	Leucine-rich repeat extensin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=L...	[more]

BLAST of Lcy03g001770 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JHC7	6.6e-58	80.00	leucine-rich repeat extensin-like protein 4 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1F4V8	5.6e-57	84.06	leucine-rich repeat extensin-like protein 4 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1HAF9	7.3e-57	78.62	leucine-rich repeat extensin-like protein 4 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1KXW2	2.8e-56	81.43	leucine-rich repeat extensin-like protein 4 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A0A0LWK1	2.9e-53	76.06	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G383520 PE=4 SV=1	[more]

BLAST of Lcy03g001770 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022987605.1	1.4e-57	80.00	leucine-rich repeat extensin-like protein 4 [Cucurbita maxima]	[more]
XP_023531535.1	3.0e-57	84.78	leucine-rich repeat extensin-like protein 4 [Cucurbita pepo subsp. pepo]	[more]
KAG6587943.1	4.0e-57	84.78	Leucine-rich repeat extensin-like protein 4, partial [Cucurbita argyrosperma sub...	[more]
XP_023515643.1	1.2e-56	79.31	leucine-rich repeat extensin-like protein 4 [Cucurbita pepo subsp. pepo]	[more]
XP_022933483.1	1.2e-56	84.06	leucine-rich repeat extensin-like protein 4 [Cucurbita moschata]	[more]

BLAST of Lcy03g001770 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G18670.1	6.1e-48	64.79	Leucine-rich repeat (LRR) family protein	[more]
AT3G24480.1	2.3e-47	63.12	Leucine-rich repeat (LRR) family protein	[more]
AT4G13340.1	3.1e-39	59.86	Leucine-rich repeat (LRR) family protein	[more]
AT3G19020.1	1.5e-30	50.00	Leucine-rich repeat (LRR) family protein	[more]
AT1G12040.1	5.8e-30	56.86	leucine-rich repeat/extensin 1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR32093:SF111	LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 5	coord: 7..142
None	No IPR available	PANTHER	PTHR32093	LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED	coord: 7..142

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy03g001770.1	Lcy03g001770.1	mRNA