Lcy03g001750 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy03g001750
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	RNA helicase
Location	Chr03: 6155900 .. 6157869 (+)
RNA-Seq Expression	Lcy03g001750
Synteny	Lcy03g001750

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAAGAAGGAGAAGAAGATGAAGAACAAAGCTCTTGTGGAGGCCCTAGGTTCTGAGGAAGCTTTTGAGCAGAAGAGTGACGAGTTGGTTCTTTCGGACAAGAAGAAGAAGAAGAAGAGTAAGAGTGATAAAGAAAGCATGAAGCGGAAAGCTGTAGAAGTGGCTGACGACGAGGATAGGAGCGAGACGAGCTCGGAGTTAGGCGAGCCTGTGAATTCGAGGTTGAAGAGCGGAAAGGAAAAGAAGAGCTCGAAGAAGGCAAGGTGGTTGAGTCTGACGAGGACGATGTGGAGCAGGAGCCCGAGGATCCGAATGCTGTTTCTAGGTTTCTGATTTCGGAACCGCTGAAGGCGAGGCTAAAGGAGAAGGGAATTACCGCGTTGTTTCCGATTCAGGCTATGACGTTTGACACCGTATATGACGGGTCTGATTTGGTTAGACAGGCCAGAACGGGACAGGTATAATTCGTTTGGTTGATTTTTTATTTGTTTTTCTGAGACTGTTAATTAAATGTTACGCTTTCCTCTTTAATATGAAACATAGAATTGGTATTATTTGGATTCAGACCAGCCGCTGAAAAACTGCAATAGAATCGAAGGTCGAGAATTTTTCTATTAGAAACTTGATTTGAAGCTCTTTTTTTCATGAGAAAATTCTTTTTTTCCACCTGAATGGTAGACTACCAGGCTCGCACGTTAGATGTTATGTTTTAGTTGTTTCCTGTCATGCAACTAAAACATTGCACGGTTAACTTTGTCTTGTCAAAACTTCTGTTATGTATAATCTTCATGTCTTTTGTGCAGGGTAAAACATTAGCTTTTGTTTTGCCCATCTTGGAGTCTTTAGTAAATGGGCCTTCTAAATCTTCGCGAGTGATTGGATATGGAAGGTCTCCTAGTGTTATAGTACTTTTACCCACTAGGGAGTTGGCTGACCAGGTATGGTTTGAAGATTTTTTTAATTTACATTTGTAATCTGATTTCAATATTTTGAAAAGTTGTGTTTTGACTAGGTGTTCGAGGACTTCAAATTTTATGGTCTAGCATTAGAGTCTTGTTGTTTATGTGGAGGAATGCTTTATGGGCCCCAAGAAACTAAATGAAGAAGGGGGGTTGACATAGTTGTTGGAACACCTGGTCGTGTAAAGGTAGAAATTTACAGTGAATTATGGAAAGCTTTGTTAAATGATGGGAAAACTTTAGTTCTTGCTTACTGACTTTGGTGTAGGATCACATTAACAGAAATAATATTGATATACGGTCTCTAAAGTTTAGGGTCCTTGATGAAGCTGATGAAATGTTGAGGATGGGTTTTGTTGAAGATGTTGAATTTATTCTTGGTATAGTATTTGGAATCTTAATTAATTGTTACACTGCGAGAGTGAAATCTATTTGCCTTTATTTCTTGATATTATGTCATTTATATTTACCTGACGTGGGCAAATCTATTTTGGTGGATTTTTAGGCAAGGTGGAGGATGTAAACAAAGTTCAAACACTTCTTTTCAGTGCCACTTTACCAGACTGGGTGAAAGATGTCAGTATTTGAACATAATATACAGTTACCGGGCTTCTTAATTTTAAACCTGCAATATAAATTAGCTGAAAAATTTGCTACAAAATGTACTTTTCTTTTGAAACTGTTATTGACAATTTGTTTTGCATTATTAGATTGCCTCTAGGTTCCTTAAAGCAAACAAGAAAACTGCAGATCTTGTTGGTAATGGAAAATGAAGGCCAGTAAGGATGTTAGGCATATTGTTATTCCTTGCTCTGATTTAGAAAGGTCTCGTCTTATTCCTGATATCATTCTATAGCAGGTTAGTGGTCTGATTTAGAAAGGTCTCGTCTTATTCCTGATATACAACAGTCTCAACGTTCGGTAATTTTCTAATTATCTTTTTATGTGTTTTTTTCAGGATTGATTGTGTGGCCATTTCTTGCGCAGGCTAGTCTTATTTATGGTTGA

mRNA sequence

ATGGAAAAGAAGGAGAAGAAGATGAAGAACAAAGCTCTTGTGGAGGCCCTAGGTTCTGAGGAAGCTTTTGAGCAGAAGAGTGACGAGTTGGTTCTTTCGGACAAGAAGAAGAAGAAGAAGAGTAAGAGTGATAAAGAAAGCATGAAGCGGAAAGCTGTAGAAGTGGCTGACGACGAGGATAGGAGCGAGACGAGCTCGGAGTTAGGCGAGCCTGTGAATTCGAGGTTGAAGAGCGGAAAGGAAAAGAAGAGCTCGAAGAAGGCAAGGTTTCTGATTTCGGAACCGCTGAAGGCGAGGCTAAAGGAGAAGGGAATTACCGCGTTGTTTCCGATTCAGGCTATGACGTTTGACACCGTATATGACGGGTCTGATTTGGTTAGACAGGCCAGAACGGGACAGGGTAAAACATTAGCTTTTGTTTTGCCCATCTTGGAGTCTTTAGTAAATGGGCCTTCTAAATCTTCGCGAGTGATTGGATATGGAAGGTCTCCTAGTGTTATAGTACTTTTACCCACTAGGGAGTTGGCTGACCAGGATCACATTAACAGAAATAATATTGATATACGGTCTCTAAAGTTTAGGGTCCTTGATGAAGCTGATGAAATGTTGAGGATGGGTTTTGTTGAAGATGTTGAATTTATTCTTGGCAAGGTGGAGGATGTAAACAAAGTTCAAACACTTCTTTTCAGTGCCACTTTACCAGACTGGGTGAAAGATATTGCCTCTAGGTTCCTTAAAGCAAACAAGAAAACTGCAGATCTTGTTGGATTGATTGTGTGGCCATTTCTTGCGCAGGCTAGTCTTATTTATGGTTGA

Coding sequence (CDS)

ATGGAAAAGAAGGAGAAGAAGATGAAGAACAAAGCTCTTGTGGAGGCCCTAGGTTCTGAGGAAGCTTTTGAGCAGAAGAGTGACGAGTTGGTTCTTTCGGACAAGAAGAAGAAGAAGAAGAGTAAGAGTGATAAAGAAAGCATGAAGCGGAAAGCTGTAGAAGTGGCTGACGACGAGGATAGGAGCGAGACGAGCTCGGAGTTAGGCGAGCCTGTGAATTCGAGGTTGAAGAGCGGAAAGGAAAAGAAGAGCTCGAAGAAGGCAAGGTTTCTGATTTCGGAACCGCTGAAGGCGAGGCTAAAGGAGAAGGGAATTACCGCGTTGTTTCCGATTCAGGCTATGACGTTTGACACCGTATATGACGGGTCTGATTTGGTTAGACAGGCCAGAACGGGACAGGGTAAAACATTAGCTTTTGTTTTGCCCATCTTGGAGTCTTTAGTAAATGGGCCTTCTAAATCTTCGCGAGTGATTGGATATGGAAGGTCTCCTAGTGTTATAGTACTTTTACCCACTAGGGAGTTGGCTGACCAGGATCACATTAACAGAAATAATATTGATATACGGTCTCTAAAGTTTAGGGTCCTTGATGAAGCTGATGAAATGTTGAGGATGGGTTTTGTTGAAGATGTTGAATTTATTCTTGGCAAGGTGGAGGATGTAAACAAAGTTCAAACACTTCTTTTCAGTGCCACTTTACCAGACTGGGTGAAAGATATTGCCTCTAGGTTCCTTAAAGCAAACAAGAAAACTGCAGATCTTGTTGGATTGATTGTGTGGCCATTTCTTGCGCAGGCTAGTCTTATTTATGGTTGA

Protein sequence

MEKKEKKMKNKALVEALGSEEAFEQKSDELVLSDKKKKKKSKSDKESMKRKAVEVADDEDRSETSSELGEPVNSRLKSGKEKKSSKKARFLISEPLKARLKEKGITALFPIQAMTFDTVYDGSDLVRQARTGQGKTLAFVLPILESLVNGPSKSSRVIGYGRSPSVIVLLPTRELADQDHINRNNIDIRSLKFRVLDEADEMLRMGFVEDVEFILGKVEDVNKVQTLLFSATLPDWVKDIASRFLKANKKTADLVGLIVWPFLAQASLIYG

Homology

[Close]

BLAST of Lcy03g001750 vs. ExPASy Swiss-Prot
Match: Q39189 (DEAD-box ATP-dependent RNA helicase 7 OS=Arabidopsis thaliana OX=3702 GN=RH7 PE=1 SV=2)

HSP 1 Score: 245.0 bits (624), Expect = 1.0e-63
Identity = 159/308 (51.62%), Postives = 199/308 (64.61%), Query Frame = 0


Query: 2   EKKEKKMKNKALVEA--LGSEEAFEQKSDELVLSDKKKKKKSKSDKESMKRKAVEVADDE 61
           +K+EKKMK K  ++   L S++  +++  +L  SD+++ +K KS K+  KRKA E  +DE
Sbjct: 9   KKEEKKMKKKMALDTPELDSKKGKKEQKLKLSDSDEEESEKKKSKKKDKKRKASE-EEDE 68

Query: 62  DRSETSSELGEPVNSRLKSGKE----KKSSKKARFLISEPLKARLKEKGITALFPIQAMT 121
            +S++SSE  +  + ++K G E       +  ++F IS PL+ +LK  GI ALFPIQA T
Sbjct: 69  VKSDSSSE-KKKSSKKVKLGVEDVEVDNPNAVSKFRISAPLREKLKANGIEALFPIQAST 128

Query: 122 FDTVYDGSDLVRQARTGQGKTLAFVLPILESLVNGPSKSSRVIGYGRSPSVIVLLPTREL 181
           FD V DG+DLV +ARTGQGKTLAFVLPILESLVNGP+KS R +GYGRSPSV+VLLPTREL
Sbjct: 129 FDMVLDGADLVGRARTGQGKTLAFVLPILESLVNGPAKSKRKMGYGRSPSVLVLLPTREL 188

Query: 182 ADQ-----------------------------------------------DHINRNNIDI 241
           A Q                                               DHI R N+D 
Sbjct: 189 AKQVAADFDAYGGSLGLSSCCLYGGDSYPVQEGKLKRGVDIVVGTPGRIKDHIERQNLDF 248

Query: 242 RSLKFRVLDEADEMLRMGFVEDVEFILGKVEDVNKVQTLLFSATLPDWVKDIASRFLKAN 257
             L+FRVLDEADEMLRMGFVEDVE ILGKVED  KVQTLLFSATLP WVK+I++RFLK +
Sbjct: 249 SYLQFRVLDEADEMLRMGFVEDVELILGKVEDSTKVQTLLFSATLPSWVKNISNRFLKRD 308

[Close]

BLAST of Lcy03g001750 vs. ExPASy Swiss-Prot
Match: Q650T9 (DEAD-box ATP-dependent RNA helicase 7 OS=Oryza sativa subsp. japonica OX=39947 GN=Os09g0520700 PE=2 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 3.4e-56
Identity = 148/304 (48.68%), Postives = 172/304 (56.58%), Query Frame = 0


Query: 2   EKKEKKMKNKALVEALGSEEAFEQKSDELVLSDKKKKKKSKSDKESMKRKAVEVADDEDR 61
           EKKEKK K K    +  S    E++S     SD+      K+ KE  K K V   ++ED 
Sbjct: 41  EKKEKKRKAKEPSPSSSSSSEEEERSS--TSSDEPAPAAKKAKKEKTKEKVVVEEEEEDD 100

Query: 62  SETSSELGEPVNSRLKSGKEKKSSKK--ARFLISEPLKARLKEKGITALFPIQAMTFDTV 121
            E              SG E  +     A F ISE L+ +LK KGI ALFPIQA TFD V
Sbjct: 101 DE---------GELTASGDEDPADPNALANFRISESLREKLKSKGIKALFPIQATTFDLV 160

Query: 122 YDGSDLVRQARTGQGKTLAFVLPILESLVNGPSKSSRVIGYGRSPSVIVLLPTRELADQ- 181
            DG DLV +ARTGQGKTLAFVLPILESLVNG  K+SR   YGR P+V+VLLPTRELA Q 
Sbjct: 161 LDGHDLVGRARTGQGKTLAFVLPILESLVNGTHKASRRTDYGRPPTVLVLLPTRELAKQV 220

Query: 182 ----------------------------------------------DHINRNNIDIRSLK 241
                                                         D + +  ++ RSLK
Sbjct: 221 HTDFAFYGATFGLSACCVYGGSDYRSQEMAIRKGVDIVVGTPGRVKDFVEKGTLNFRSLK 280

Query: 242 FRVLDEADEMLRMGFVEDVEFILGKVEDVNKVQTLLFSATLPDWVKDIASRFLKANKKTA 257
           FRVLDEADEML MGFV+DVE ILGKVEDV KVQTLLFSAT+P+WVK ++ RFLK+ KKT 
Sbjct: 281 FRVLDEADEMLNMGFVDDVELILGKVEDVTKVQTLLFSATIPEWVKKLSLRFLKSGKKTV 333

[Close]

BLAST of Lcy03g001750 vs. ExPASy Swiss-Prot
Match: Q41382 (DEAD-box ATP-dependent RNA helicase 7 OS=Spinacia oleracea OX=3562 GN=RH7 PE=2 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 7.6e-56
Identity = 154/315 (48.89%), Postives = 186/315 (59.05%), Query Frame = 0


Query: 3   KKEKKMKNKALVEALGSEEAFEQKSDELVLSDKKKKKKS---KSDKE----SMKRKAVEV 62
           KKEKKMK+    E L S++   +K      S KKK+K S   K DKE      KRKAV++
Sbjct: 17  KKEKKMKS----ETLDSDDTVVKKEKS---SSKKKEKSSSSGKKDKEEKEKKKKRKAVDL 76

Query: 63  ADDEDRSETSSELGEPVNSRLKSGK--------EKKSSKKARFLISEPLKARLKEKGITA 122
            D  D+S+ SSEL +  + + K  K         +  +  + F IS+PLK  L  KGI A
Sbjct: 77  DDSSDKSDNSSELVQADDLKPKKAKVMEEAVVEAEDPNSLSNFRISKPLKDVLISKGIKA 136

Query: 123 LFPIQAMTFDTVYDGSDLVRQARTGQGKTLAFVLPILESLVNGPSKSSRVIGYGRSPSVI 182
           LFPIQAMTFD V DG DLV +ARTGQGKTLAFVLPI+ESLVNG +K  R  G+GR PSV+
Sbjct: 137 LFPIQAMTFDNVIDGCDLVGRARTGQGKTLAFVLPIVESLVNGRTKDLRRSGHGRLPSVL 196

Query: 183 VLLPTRELADQ-----------------------------------------------DH 242
           VLLPTRELA Q                                               D 
Sbjct: 197 VLLPTRELATQVLADFQVYGGAVGLTACSVYGGAPFHSQISSLTRGVDIVVGTPGRVKDL 256

Query: 243 INRNNIDIRSLKFRVLDEADEMLRMGFVEDVEFILGKVEDVNKVQTLLFSATLPDWVKDI 256
           + +  + + SL FRVLDEADEML+MGFV+DVE ILGKV+ V+KVQTLLFSATLP WVK I
Sbjct: 257 LEKGVLKLGSLLFRVLDEADEMLKMGFVDDVELILGKVDHVSKVQTLLFSATLPSWVKQI 316

[Close]

BLAST of Lcy03g001750 vs. ExPASy Swiss-Prot
Match: Q9BQ39 (ATP-dependent RNA helicase DDX50 OS=Homo sapiens OX=9606 GN=DDX50 PE=1 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 6.5e-31
Identity = 104/304 (34.21%), Postives = 145/304 (47.70%), Query Frame = 0


Query: 4   KEKKMKNKALVEALGSEEAFEQKSDELVLSDKKKKK---KSKSDKESMKRKAVEVADDED 63
           K+ KMK K   +   +EE F + SDE   S K ++K       D+   K K V   D   
Sbjct: 62  KKSKMKEKLNGD---TEEGFNRLSDEFSKSHKSRRKDLPNGDIDEYEKKSKRVSSLDTST 121

Query: 64  RSETSSELGEPVNSRLKSGKEKKSSKKARFLISEPLKARLKEKGITALFPIQAMTFDTVY 123
              + ++L E +       +E+K    + F ISE     LK +G+T LFPIQ  TF  VY
Sbjct: 122 HKSSDNKLEETLT------REQKEGAFSNFPISEETIKLLKGRGVTYLFPIQVKTFGPVY 181

Query: 124 DGSDLVRQARTGQGKTLAFVLPILESLVNGPSKSSRVIGYGRSPSVIVLLPTRELADQ-- 183
           +G DL+ QARTG GKT +F +P++E L     ++   I   RSP V+VL PTRELA+Q  
Sbjct: 182 EGKDLIAQARTGTGKTFSFAIPLIERL----QRNQETIKKSRSPKVLVLAPTRELANQVA 241

Query: 184 -------------------------------------------DHINRNNIDIRSLKFRV 243
                                                      DH+    +D+  L+  V
Sbjct: 242 KDFKDITRKLSVACFYGGTSYQSQINHIRNGIDILVGTPGRIKDHLQSGRLDLSKLRHVV 301

Query: 244 LDEADEMLRMGFVEDVEFILG---KVEDVNKVQTLLFSATLPDWVKDIASRFLKANKKTA 257
           LDE D+ML +GF E VE I+    K +  +  QTLLFSAT P WV  +A +++K+  +  
Sbjct: 302 LDEVDQMLDLGFAEQVEDIIHESYKTDSEDNPQTLLFSATCPQWVYKVAKKYMKSRYEQV 352

[Close]

BLAST of Lcy03g001750 vs. ExPASy Swiss-Prot
Match: Q99MJ9 (ATP-dependent RNA helicase DDX50 OS=Mus musculus OX=10090 GN=Ddx50 PE=2 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 3.2e-30
Identity = 94/279 (33.69%), Postives = 137/279 (49.10%), Query Frame = 0


Query: 27  SDELVLSDKKKKKK-SKSDKESMKRKAVEVADDEDRSETSSELGEPVNSRLKSGKEKKSS 86
           SDE   S K ++K     D +  ++++  V+  E+  ++S +  E +       +E+K  
Sbjct: 81  SDEFSPSHKSRRKDLPNGDVDEYEKRSKRVSSSENSHKSSDKAEETLT------REQKEG 140

Query: 87  KKARFLISEPLKARLKEKGITALFPIQAMTFDTVYDGSDLVRQARTGQGKTLAFVLPILE 146
             + F ISE     LK +G+T LFPIQ  TF  VY+G DL+ QARTG GKT +F +P++E
Sbjct: 141 AFSNFSISEETIKLLKGRGVTYLFPIQVKTFGPVYEGKDLIAQARTGTGKTFSFAIPLIE 200

Query: 147 SLVNGPSKSSRVIGYGRSPSVIVLLPTRELADQ--------------------------- 206
            L     ++   I   RSP V+VL PTRELA+Q                           
Sbjct: 201 RL----QRNQETIKKSRSPKVLVLAPTRELANQVAKDFKDITRKLSVACFYGGTSYQSQI 260

Query: 207 ------------------DHINRNNIDIRSLKFRVLDEADEMLRMGFVEDVEFILG---K 257
                             DH+    +D+  L+  VLDE D+ML +GF E VE I+    K
Sbjct: 261 NQIRNGIDILVGTPGRIKDHLQSGRLDLSKLRHVVLDEVDQMLDLGFAEQVEDIIHESYK 320

[Close]

BLAST of Lcy03g001750 vs. ExPASy TrEMBL
Match: A0A6J1JZR9 (RNA helicase OS=Cucurbita maxima OX=3661 GN=LOC111491171 PE=3 SV=1)

HSP 1 Score: 387.9 bits (995), Expect = 3.5e-104
Identity = 229/317 (72.24%), Postives = 238/317 (75.08%), Query Frame = 0


Query: 8   MKNKALVEALGSEEAFEQKSDELVLSDKKKKKKSKSDKESMKRKAVEVADDEDRSETSSE 67
           MKNKALVEALG+EEAFEQ+SD+LVLSD KKKKKSK DKES KRKAVEVADDEDRSETSSE
Sbjct: 1   MKNKALVEALGTEEAFEQRSDDLVLSD-KKKKKSKGDKESKKRKAVEVADDEDRSETSSE 60

Query: 68  LGEPVNSRLKSGKEKKSSKK---------------------ARFLISEPLKARLKEKGIT 127
           LGEPVNSRLKSGKEKKSSKK                     +RF ISEPLKARLKEKGI 
Sbjct: 61  LGEPVNSRLKSGKEKKSSKKTKVVESDEDDAEKEVEDPNAVSRFRISEPLKARLKEKGII 120

Query: 128 ALFPIQAMTFDTVYDGSDLVRQARTGQGKTLAFVLPILESLVNGPSKSSRVIGYGRSPSV 187
           ALFPIQAMTFDTVYDG DLV +ARTGQGKTLAFVLPILE L+NGPSKSSR  G+GRSPSV
Sbjct: 121 ALFPIQAMTFDTVYDGFDLVGRARTGQGKTLAFVLPILECLINGPSKSSRGTGFGRSPSV 180

Query: 188 IVLLPTRELADQ-----------------------------------------------D 247
           IVLLPTRELADQ                                               D
Sbjct: 181 IVLLPTRELADQVFEDFKFYGHALGLESCCLCGGMLYGPQETKLRRGVDIVIGTPGRVKD 240

Query: 248 HINRNNIDIRSLKFRVLDEADEMLRMGFVEDVEFILGKVEDVNKVQTLLFSATLPDWVKD 257
           HINRNNID+RSLKFRVLDEADEMLRMGFV+DVEFILGKVEDVNKVQTLLFSATLPDWVK 
Sbjct: 241 HINRNNIDLRSLKFRVLDEADEMLRMGFVDDVEFILGKVEDVNKVQTLLFSATLPDWVKT 300

[Close]

BLAST of Lcy03g001750 vs. ExPASy TrEMBL
Match: A0A6J1H389 (RNA helicase OS=Cucurbita moschata OX=3662 GN=LOC111459276 PE=3 SV=1)

HSP 1 Score: 387.9 bits (995), Expect = 3.5e-104
Identity = 229/317 (72.24%), Postives = 238/317 (75.08%), Query Frame = 0


Query: 8   MKNKALVEALGSEEAFEQKSDELVLSDKKKKKKSKSDKESMKRKAVEVADDEDRSETSSE 67
           MKNKALVEALG+EEAFEQ+SD+LVLSD KKKKKSK DKES KRKAVEVADDEDRSETSSE
Sbjct: 1   MKNKALVEALGTEEAFEQRSDDLVLSD-KKKKKSKGDKESKKRKAVEVADDEDRSETSSE 60

Query: 68  LGEPVNSRLKSGKEKKSSKK---------------------ARFLISEPLKARLKEKGIT 127
           LGEPVNSRLKSGKEKKSSKK                     +RF ISEPLKARLKEKGI 
Sbjct: 61  LGEPVNSRLKSGKEKKSSKKTKVIESDEDDAEKEVEDPNAVSRFRISEPLKARLKEKGII 120

Query: 128 ALFPIQAMTFDTVYDGSDLVRQARTGQGKTLAFVLPILESLVNGPSKSSRVIGYGRSPSV 187
           ALFPIQAMTFDTVYDG DLV +ARTGQGKTLAFVLPILE L+NGPSKSSR  G+GRSPSV
Sbjct: 121 ALFPIQAMTFDTVYDGFDLVGRARTGQGKTLAFVLPILECLINGPSKSSRGTGFGRSPSV 180

Query: 188 IVLLPTRELADQ-----------------------------------------------D 247
           IVLLPTRELADQ                                               D
Sbjct: 181 IVLLPTRELADQVFEDFKFYGQALGLESCCLCGGMLYGPQETKLRRGVDIVIGTPGRVKD 240

Query: 248 HINRNNIDIRSLKFRVLDEADEMLRMGFVEDVEFILGKVEDVNKVQTLLFSATLPDWVKD 257
           HINRNNID+RSLKFRVLDEADEMLRMGFV+DVEFILGKVEDVNKVQTLLFSATLPDWVK 
Sbjct: 241 HINRNNIDLRSLKFRVLDEADEMLRMGFVDDVEFILGKVEDVNKVQTLLFSATLPDWVKT 300

[Close]

BLAST of Lcy03g001750 vs. ExPASy TrEMBL
Match: A0A6J1ESS9 (RNA helicase OS=Cucurbita moschata OX=3662 GN=LOC111435671 PE=3 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 4.6e-104
Identity = 229/324 (70.68%), Postives = 243/324 (75.00%), Query Frame = 0


Query: 1   MEKKEKKMKNKALVEALGSEEAFEQKSDELVLSDKKKKKKSKSDKESMKRKAVEVADDED 60
           M+KKEKKMKNKALVEAL  E+AFEQKSDELVLSD KKKKKSK DKES KRKAVE ADD D
Sbjct: 1   MDKKEKKMKNKALVEALPLEDAFEQKSDELVLSD-KKKKKSKGDKESKKRKAVEEADDGD 60

Query: 61  RSETSSELGEPVNSRLKSGKEKKSSKK---------------------ARFLISEPLKAR 120
           RSETSSELGEPVNSRLK+GKEKKSSKK                     ++F ISEPL+AR
Sbjct: 61  RSETSSELGEPVNSRLKNGKEKKSSKKSKVVESDEDDVEKEADDQNAISKFRISEPLRAR 120

Query: 121 LKEKGITALFPIQAMTFDTVYDGSDLVRQARTGQGKTLAFVLPILESLVNGPSKSSRVIG 180
           LKEKGI++LFPIQAMTFDTVYDG DLV +ARTGQGKTLAFVLPILES+VNGPSKSS+V G
Sbjct: 121 LKEKGISSLFPIQAMTFDTVYDGFDLVGRARTGQGKTLAFVLPILESIVNGPSKSSKVTG 180

Query: 181 YGRSPSVIVLLPTRELADQ----------------------------------------- 240
           YGR+PSVIVLLPTRELADQ                                         
Sbjct: 181 YGRTPSVIVLLPTRELADQVFEDFKFYGHALGLESCCLCGGMLYGPQENKLRRGVDIVVG 240

Query: 241 ------DHINRNNIDIRSLKFRVLDEADEMLRMGFVEDVEFILGKVEDVNKVQTLLFSAT 257
                 DHINRNNID+RSLKFRVLDEADEMLRMGFV+DVEFILGKVEDVNKVQTLLFSAT
Sbjct: 241 TPGRVKDHINRNNIDLRSLKFRVLDEADEMLRMGFVDDVEFILGKVEDVNKVQTLLFSAT 300

[Close]

BLAST of Lcy03g001750 vs. ExPASy TrEMBL
Match: A0A6J1I4T2 (RNA helicase OS=Cucurbita maxima OX=3661 GN=LOC111469154 PE=3 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 1.0e-103
Identity = 228/324 (70.37%), Postives = 242/324 (74.69%), Query Frame = 0


Query: 1   MEKKEKKMKNKALVEALGSEEAFEQKSDELVLSDKKKKKKSKSDKESMKRKAVEVADDED 60
           M+KKEKKMKNKALVEAL SE+AFEQKSDELVLSD KKKKKSK DKES KRKAVE ADD D
Sbjct: 1   MDKKEKKMKNKALVEALPSEDAFEQKSDELVLSD-KKKKKSKGDKESKKRKAVEEADDGD 60

Query: 61  RSETSSELGEPVNSRLKSGKEKKSSKK---------------------ARFLISEPLKAR 120
           RSETSSELGEPVNSRLK+GKEKKSSKK                     ++F ISEPL+AR
Sbjct: 61  RSETSSELGEPVNSRLKNGKEKKSSKKSKVVESDEDDVEKEADDQNAVSKFRISEPLRAR 120

Query: 121 LKEKGITALFPIQAMTFDTVYDGSDLVRQARTGQGKTLAFVLPILESLVNGPSKSSRVIG 180
           LKEKGI +LFPIQA+TFDTVYDG DLV +ARTGQGKTLAFVLPILES+VNGPSKSS+V G
Sbjct: 121 LKEKGIISLFPIQALTFDTVYDGFDLVGRARTGQGKTLAFVLPILESIVNGPSKSSKVTG 180

Query: 181 YGRSPSVIVLLPTRELADQ----------------------------------------- 240
           YGR+PSVIVLLPTRELADQ                                         
Sbjct: 181 YGRTPSVIVLLPTRELADQVFEDFKFYGHALGLESCCLCGGMLYGPQENKLRRGVDIVVG 240

Query: 241 ------DHINRNNIDIRSLKFRVLDEADEMLRMGFVEDVEFILGKVEDVNKVQTLLFSAT 257
                 DHINRNNID+RSLKFRVLDEADEMLRMGFV+DVEFILGKVEDVNKVQTLLFSAT
Sbjct: 241 TPGRVKDHINRNNIDLRSLKFRVLDEADEMLRMGFVDDVEFILGKVEDVNKVQTLLFSAT 300

[Close]

BLAST of Lcy03g001750 vs. ExPASy TrEMBL
Match: A0A1S3CTB6 (RNA helicase OS=Cucumis melo OX=3656 GN=LOC103504655 PE=3 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 3.6e-101
Identity = 226/324 (69.75%), Postives = 237/324 (73.15%), Query Frame = 0


Query: 1   MEKKEKKMKNKALVEALGSEEAFEQKSDELVLSDKKKKKKSKSDKESMKRKAVEVADDED 60
           M+KKEKKMKNKALVEAL S + FEQ +D L LSD KKKKKSKSDKES KRKAVEVADD D
Sbjct: 1   MDKKEKKMKNKALVEALASNDVFEQNADGLDLSD-KKKKKSKSDKESKKRKAVEVADDGD 60

Query: 61  RSETSSELGEPVNSRLKSGKEKKSSKK---------------------ARFLISEPLKAR 120
           RSETSSELGEPVNSR KSGKEKKSSKK                      RF ISEPLKA+
Sbjct: 61  RSETSSELGEPVNSRSKSGKEKKSSKKVKVVDSEDDDVEKEAENPNAVTRFRISEPLKAK 120

Query: 121 LKEKGITALFPIQAMTFDTVYDGSDLVRQARTGQGKTLAFVLPILESLVNGPSKSSRVIG 180
           LKEKGI++LFPIQAMTFDTVYDGSDLV +ARTGQGKTLAFVLPILESLVNGP KSSRV G
Sbjct: 121 LKEKGISSLFPIQAMTFDTVYDGSDLVGRARTGQGKTLAFVLPILESLVNGPFKSSRVTG 180

Query: 181 YGRSPSVIVLLPTRELADQ----------------------------------------- 240
           YGRSPSVIVLLPTRELADQ                                         
Sbjct: 181 YGRSPSVIVLLPTRELADQVFEDFKFYGRALGLDSCCLCGGMQYGPQEIALKRGVDIVVG 240

Query: 241 ------DHINRNNIDIRSLKFRVLDEADEMLRMGFVEDVEFILGKVEDVNKVQTLLFSAT 257
                 DHINRNNID+RSLKFRVLDEADEML MGFV+DVEFILGKV DVNKVQTLLFSAT
Sbjct: 241 TPGRVKDHINRNNIDLRSLKFRVLDEADEMLNMGFVDDVEFILGKVADVNKVQTLLFSAT 300

[Close]

BLAST of Lcy03g001750 vs. NCBI nr
Match: XP_023551208.1 (DEAD-box ATP-dependent RNA helicase 7-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 389.8 bits (1000), Expect = 1.9e-104
Identity = 230/324 (70.99%), Postives = 244/324 (75.31%), Query Frame = 0


Query: 1   MEKKEKKMKNKALVEALGSEEAFEQKSDELVLSDKKKKKKSKSDKESMKRKAVEVADDED 60
           M+KKEKKMKNKALVEAL SE+AFEQKSDELVLSD KKKKKSK DKES KRKAVE ADD D
Sbjct: 1   MDKKEKKMKNKALVEALPSEDAFEQKSDELVLSD-KKKKKSKGDKESKKRKAVEEADDGD 60

Query: 61  RSETSSELGEPVNSRLKSGKEKKSSKK---------------------ARFLISEPLKAR 120
           RSETSSELGEPVNSRLK+GKEKKSSKK                     ++F ISEPL+AR
Sbjct: 61  RSETSSELGEPVNSRLKNGKEKKSSKKSKVVESDEDDVEKEADDPNAVSKFRISEPLRAR 120

Query: 121 LKEKGITALFPIQAMTFDTVYDGSDLVRQARTGQGKTLAFVLPILESLVNGPSKSSRVIG 180
           LKEKGI++LFPIQAMTFDTVYDG DLV +ARTGQGKTLAFVLPILES+VNGPSKSS+V G
Sbjct: 121 LKEKGISSLFPIQAMTFDTVYDGFDLVGRARTGQGKTLAFVLPILESIVNGPSKSSKVTG 180

Query: 181 YGRSPSVIVLLPTRELADQ----------------------------------------- 240
           YGR+PSVIVLLPTRELADQ                                         
Sbjct: 181 YGRTPSVIVLLPTRELADQVFEDFKFYGHALGLESCCLCGGMLYGPQENKLRRGVDIVVG 240

Query: 241 ------DHINRNNIDIRSLKFRVLDEADEMLRMGFVEDVEFILGKVEDVNKVQTLLFSAT 257
                 DHINRNNID+RSLKFRVLDEADEMLRMGFV+DVEFILGKVEDVNKVQTLLFSAT
Sbjct: 241 TPGRVKDHINRNNIDLRSLKFRVLDEADEMLRMGFVDDVEFILGKVEDVNKVQTLLFSAT 300

[Close]

BLAST of Lcy03g001750 vs. NCBI nr
Match: KAG6579664.1 (DEAD-box ATP-dependent RNA helicase 7, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 389.8 bits (1000), Expect = 1.9e-104
Identity = 230/324 (70.99%), Postives = 244/324 (75.31%), Query Frame = 0


Query: 1   MEKKEKKMKNKALVEALGSEEAFEQKSDELVLSDKKKKKKSKSDKESMKRKAVEVADDED 60
           M+KKEKKMKNKALVEAL SE+AFEQKSDELVLSD KKKKKSK DKES KRKAVE ADD D
Sbjct: 1   MDKKEKKMKNKALVEALPSEDAFEQKSDELVLSD-KKKKKSKGDKESKKRKAVEEADDGD 60

Query: 61  RSETSSELGEPVNSRLKSGKEKKSSKK---------------------ARFLISEPLKAR 120
           RSETSSELGEPVNSRLK+GKEKKSSKK                     ++F ISEPL+AR
Sbjct: 61  RSETSSELGEPVNSRLKNGKEKKSSKKSKVVESDEDDVEKEADDQNAVSKFRISEPLRAR 120

Query: 121 LKEKGITALFPIQAMTFDTVYDGSDLVRQARTGQGKTLAFVLPILESLVNGPSKSSRVIG 180
           LKEKGI++LFPIQAMTFDTVYDG DLV +ARTGQGKTLAFVLPILES+VNGPSKSS+V G
Sbjct: 121 LKEKGISSLFPIQAMTFDTVYDGFDLVGRARTGQGKTLAFVLPILESIVNGPSKSSKVTG 180

Query: 181 YGRSPSVIVLLPTRELADQ----------------------------------------- 240
           YGR+PSVIVLLPTRELADQ                                         
Sbjct: 181 YGRTPSVIVLLPTRELADQVFEDFKFYGHALGLESCCLCGGMLYGPQENKLRRGVDIVVG 240

Query: 241 ------DHINRNNIDIRSLKFRVLDEADEMLRMGFVEDVEFILGKVEDVNKVQTLLFSAT 257
                 DHINRNNID+RSLKFRVLDEADEMLRMGFV+DVEFILGKVEDVNKVQTLLFSAT
Sbjct: 241 TPGRVKDHINRNNIDLRSLKFRVLDEADEMLRMGFVDDVEFILGKVEDVNKVQTLLFSAT 300

[Close]

BLAST of Lcy03g001750 vs. NCBI nr
Match: XP_022957864.1 (DEAD-box ATP-dependent RNA helicase 7-like [Cucurbita moschata] >KAG6605682.1 DEAD-box ATP-dependent RNA helicase 7, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035590.1 DEAD-box ATP-dependent RNA helicase 7 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 387.9 bits (995), Expect = 7.3e-104
Identity = 229/317 (72.24%), Postives = 238/317 (75.08%), Query Frame = 0


Query: 8   MKNKALVEALGSEEAFEQKSDELVLSDKKKKKKSKSDKESMKRKAVEVADDEDRSETSSE 67
           MKNKALVEALG+EEAFEQ+SD+LVLSD KKKKKSK DKES KRKAVEVADDEDRSETSSE
Sbjct: 1   MKNKALVEALGTEEAFEQRSDDLVLSD-KKKKKSKGDKESKKRKAVEVADDEDRSETSSE 60

Query: 68  LGEPVNSRLKSGKEKKSSKK---------------------ARFLISEPLKARLKEKGIT 127
           LGEPVNSRLKSGKEKKSSKK                     +RF ISEPLKARLKEKGI 
Sbjct: 61  LGEPVNSRLKSGKEKKSSKKTKVIESDEDDAEKEVEDPNAVSRFRISEPLKARLKEKGII 120

Query: 128 ALFPIQAMTFDTVYDGSDLVRQARTGQGKTLAFVLPILESLVNGPSKSSRVIGYGRSPSV 187
           ALFPIQAMTFDTVYDG DLV +ARTGQGKTLAFVLPILE L+NGPSKSSR  G+GRSPSV
Sbjct: 121 ALFPIQAMTFDTVYDGFDLVGRARTGQGKTLAFVLPILECLINGPSKSSRGTGFGRSPSV 180

Query: 188 IVLLPTRELADQ-----------------------------------------------D 247
           IVLLPTRELADQ                                               D
Sbjct: 181 IVLLPTRELADQVFEDFKFYGQALGLESCCLCGGMLYGPQETKLRRGVDIVIGTPGRVKD 240

Query: 248 HINRNNIDIRSLKFRVLDEADEMLRMGFVEDVEFILGKVEDVNKVQTLLFSATLPDWVKD 257
           HINRNNID+RSLKFRVLDEADEMLRMGFV+DVEFILGKVEDVNKVQTLLFSATLPDWVK 
Sbjct: 241 HINRNNIDLRSLKFRVLDEADEMLRMGFVDDVEFILGKVEDVNKVQTLLFSATLPDWVKT 300

[Close]

BLAST of Lcy03g001750 vs. NCBI nr
Match: XP_022995722.1 (DEAD-box ATP-dependent RNA helicase 7-like [Cucurbita maxima])

HSP 1 Score: 387.9 bits (995), Expect = 7.3e-104
Identity = 229/317 (72.24%), Postives = 238/317 (75.08%), Query Frame = 0


Query: 8   MKNKALVEALGSEEAFEQKSDELVLSDKKKKKKSKSDKESMKRKAVEVADDEDRSETSSE 67
           MKNKALVEALG+EEAFEQ+SD+LVLSD KKKKKSK DKES KRKAVEVADDEDRSETSSE
Sbjct: 1   MKNKALVEALGTEEAFEQRSDDLVLSD-KKKKKSKGDKESKKRKAVEVADDEDRSETSSE 60

Query: 68  LGEPVNSRLKSGKEKKSSKK---------------------ARFLISEPLKARLKEKGIT 127
           LGEPVNSRLKSGKEKKSSKK                     +RF ISEPLKARLKEKGI 
Sbjct: 61  LGEPVNSRLKSGKEKKSSKKTKVVESDEDDAEKEVEDPNAVSRFRISEPLKARLKEKGII 120

Query: 128 ALFPIQAMTFDTVYDGSDLVRQARTGQGKTLAFVLPILESLVNGPSKSSRVIGYGRSPSV 187
           ALFPIQAMTFDTVYDG DLV +ARTGQGKTLAFVLPILE L+NGPSKSSR  G+GRSPSV
Sbjct: 121 ALFPIQAMTFDTVYDGFDLVGRARTGQGKTLAFVLPILECLINGPSKSSRGTGFGRSPSV 180

Query: 188 IVLLPTRELADQ-----------------------------------------------D 247
           IVLLPTRELADQ                                               D
Sbjct: 181 IVLLPTRELADQVFEDFKFYGHALGLESCCLCGGMLYGPQETKLRRGVDIVIGTPGRVKD 240

Query: 248 HINRNNIDIRSLKFRVLDEADEMLRMGFVEDVEFILGKVEDVNKVQTLLFSATLPDWVKD 257
           HINRNNID+RSLKFRVLDEADEMLRMGFV+DVEFILGKVEDVNKVQTLLFSATLPDWVK 
Sbjct: 241 HINRNNIDLRSLKFRVLDEADEMLRMGFVDDVEFILGKVEDVNKVQTLLFSATLPDWVKT 300

[Close]

BLAST of Lcy03g001750 vs. NCBI nr
Match: XP_022928900.1 (DEAD-box ATP-dependent RNA helicase 7-like [Cucurbita moschata])

HSP 1 Score: 387.5 bits (994), Expect = 9.5e-104
Identity = 229/324 (70.68%), Postives = 243/324 (75.00%), Query Frame = 0


Query: 1   MEKKEKKMKNKALVEALGSEEAFEQKSDELVLSDKKKKKKSKSDKESMKRKAVEVADDED 60
           M+KKEKKMKNKALVEAL  E+AFEQKSDELVLSD KKKKKSK DKES KRKAVE ADD D
Sbjct: 1   MDKKEKKMKNKALVEALPLEDAFEQKSDELVLSD-KKKKKSKGDKESKKRKAVEEADDGD 60

Query: 61  RSETSSELGEPVNSRLKSGKEKKSSKK---------------------ARFLISEPLKAR 120
           RSETSSELGEPVNSRLK+GKEKKSSKK                     ++F ISEPL+AR
Sbjct: 61  RSETSSELGEPVNSRLKNGKEKKSSKKSKVVESDEDDVEKEADDQNAISKFRISEPLRAR 120

Query: 121 LKEKGITALFPIQAMTFDTVYDGSDLVRQARTGQGKTLAFVLPILESLVNGPSKSSRVIG 180
           LKEKGI++LFPIQAMTFDTVYDG DLV +ARTGQGKTLAFVLPILES+VNGPSKSS+V G
Sbjct: 121 LKEKGISSLFPIQAMTFDTVYDGFDLVGRARTGQGKTLAFVLPILESIVNGPSKSSKVTG 180

Query: 181 YGRSPSVIVLLPTRELADQ----------------------------------------- 240
           YGR+PSVIVLLPTRELADQ                                         
Sbjct: 181 YGRTPSVIVLLPTRELADQVFEDFKFYGHALGLESCCLCGGMLYGPQENKLRRGVDIVVG 240

Query: 241 ------DHINRNNIDIRSLKFRVLDEADEMLRMGFVEDVEFILGKVEDVNKVQTLLFSAT 257
                 DHINRNNID+RSLKFRVLDEADEMLRMGFV+DVEFILGKVEDVNKVQTLLFSAT
Sbjct: 241 TPGRVKDHINRNNIDLRSLKFRVLDEADEMLRMGFVDDVEFILGKVEDVNKVQTLLFSAT 300

[Close]

BLAST of Lcy03g001750 vs. TAIR 10
Match: AT5G62190.1 (DEAD box RNA helicase (PRH75) )

HSP 1 Score: 245.0 bits (624), Expect = 7.1e-65
Identity = 159/308 (51.62%), Postives = 199/308 (64.61%), Query Frame = 0


Query: 2   EKKEKKMKNKALVEA--LGSEEAFEQKSDELVLSDKKKKKKSKSDKESMKRKAVEVADDE 61
           +K+EKKMK K  ++   L S++  +++  +L  SD+++ +K KS K+  KRKA E  +DE
Sbjct: 9   KKEEKKMKKKMALDTPELDSKKGKKEQKLKLSDSDEEESEKKKSKKKDKKRKASE-EEDE 68

Query: 62  DRSETSSELGEPVNSRLKSGKE----KKSSKKARFLISEPLKARLKEKGITALFPIQAMT 121
            +S++SSE  +  + ++K G E       +  ++F IS PL+ +LK  GI ALFPIQA T
Sbjct: 69  VKSDSSSE-KKKSSKKVKLGVEDVEVDNPNAVSKFRISAPLREKLKANGIEALFPIQAST 128

Query: 122 FDTVYDGSDLVRQARTGQGKTLAFVLPILESLVNGPSKSSRVIGYGRSPSVIVLLPTREL 181
           FD V DG+DLV +ARTGQGKTLAFVLPILESLVNGP+KS R +GYGRSPSV+VLLPTREL
Sbjct: 129 FDMVLDGADLVGRARTGQGKTLAFVLPILESLVNGPAKSKRKMGYGRSPSVLVLLPTREL 188

Query: 182 ADQ-----------------------------------------------DHINRNNIDI 241
           A Q                                               DHI R N+D 
Sbjct: 189 AKQVAADFDAYGGSLGLSSCCLYGGDSYPVQEGKLKRGVDIVVGTPGRIKDHIERQNLDF 248

Query: 242 RSLKFRVLDEADEMLRMGFVEDVEFILGKVEDVNKVQTLLFSATLPDWVKDIASRFLKAN 257
             L+FRVLDEADEMLRMGFVEDVE ILGKVED  KVQTLLFSATLP WVK+I++RFLK +
Sbjct: 249 SYLQFRVLDEADEMLRMGFVEDVELILGKVEDSTKVQTLLFSATLPSWVKNISNRFLKRD 308

[Close]

BLAST of Lcy03g001750 vs. TAIR 10
Match: AT3G22330.1 (putative mitochondrial RNA helicase 2 )

HSP 1 Score: 120.9 bits (302), Expect = 1.5e-27
Identity = 74/210 (35.24%), Postives = 108/210 (51.43%), Query Frame = 0


Query: 92  ISEPLKARLKEKGITALFPIQAMTFDTVYDGSDLVRQARTGQGKTLAFVLPILESLVNGP 151
           IS  +   L  KGI  LFPIQ    +   +G D++ +ARTG GKTLAF +PI++ ++   
Sbjct: 111 ISPEIVKALSSKGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKIIKYN 170

Query: 152 SKSSRVIGYGRSPSVIVLLPTRELADQ--------------------------------- 211
           +K  R    GR+P  +VL PTRELA Q                                 
Sbjct: 171 AKHGR----GRNPLCLVLAPTRELARQVEKEFRESAPSLDTICLYGGTPIGQQMRQLDYG 230

Query: 212 ------------DHINRNNIDIRSLKFRVLDEADEMLRMGFVEDVEFILGKVEDVNKVQT 257
                       D + R  +++  ++F VLDEAD+ML++GF EDVE IL K+ +  K Q+
Sbjct: 231 VDVAVGTPGRVIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILEKLPE--KRQS 290

[Close]

BLAST of Lcy03g001750 vs. TAIR 10
Match: AT3G22310.1 (putative mitochondrial RNA helicase 1 )

HSP 1 Score: 119.0 bits (297), Expect = 5.9e-27
Identity = 73/210 (34.76%), Postives = 108/210 (51.43%), Query Frame = 0


Query: 92  ISEPLKARLKEKGITALFPIQAMTFDTVYDGSDLVRQARTGQGKTLAFVLPILESLVNGP 151
           IS  +   LK +GI  LFPIQ    +   +G D++ +ARTG GKTLAF +PI++ ++   
Sbjct: 123 ISPEIVKALKGRGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKIIKFN 182

Query: 152 SKSSRVIGYGRSPSVIVLLPTRELADQ--------------------------------- 211
           +K  R    G++P  +VL PTRELA Q                                 
Sbjct: 183 AKHGR----GKNPQCLVLAPTRELARQVEKEFRESAPSLDTICLYGGTPIGQQMRELNYG 242

Query: 212 ------------DHINRNNIDIRSLKFRVLDEADEMLRMGFVEDVEFILGKVEDVNKVQT 257
                       D + R  +++  ++F VLDEAD+ML++GF EDVE IL K+    K Q+
Sbjct: 243 IDVAVGTPGRIIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILQKLP--AKRQS 302

[Close]

BLAST of Lcy03g001750 vs. TAIR 10
Match: AT5G26742.1 (DEAD box RNA helicase (RH3) )

HSP 1 Score: 95.1 bits (235), Expect = 9.1e-20
Identity = 84/275 (30.55%), Postives = 123/275 (44.73%), Query Frame = 0


Query: 27  SDELVLSDKKKKKKSKSDKESMKRKAVEVADDEDRSETSSELGEPVNSRLKSGKEKKSSK 86
           S  L++        S   +E+ K   +   D+ D        G+  N     G+E   SK
Sbjct: 53  SSSLLVPSAVATPNSVLSEEAFKSLGLSDHDEYDLD------GDNNNVEADDGEELAISK 112

Query: 87  KARFLISEPLKARLKEKGITALFPIQAMTFDTVYDGSDLVRQARTGQGKTLAFVLPILES 146
            +   + + L+  L+++GIT LFPIQ         G D++ +A+TG GKTLAF +PI++ 
Sbjct: 113 LS---LPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKR 172

Query: 147 LVNGPSKSSRVIGYGRSPSVIVLLPTRELADQ---------------------------- 206
           L       +     GR P  +VL PTRELA Q                            
Sbjct: 173 LTEEAGDYTAFRRSGRLPKFLVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVSYTIQQS 232

Query: 207 -----------------DHINRNNIDIRSLKFRVLDEADEMLRMGFVEDVEFILGKVEDV 257
                            D I   ++ +  +++ VLDEAD+ML +GF E VE IL  +   
Sbjct: 233 ALTRGVDVVVGTPGRIIDLIEGRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENLP-- 292

[Close]

BLAST of Lcy03g001750 vs. TAIR 10
Match: AT5G26742.2 (DEAD box RNA helicase (RH3) )

HSP 1 Score: 95.1 bits (235), Expect = 9.1e-20
Identity = 84/275 (30.55%), Postives = 123/275 (44.73%), Query Frame = 0


Query: 27  SDELVLSDKKKKKKSKSDKESMKRKAVEVADDEDRSETSSELGEPVNSRLKSGKEKKSSK 86
           S  L++        S   +E+ K   +   D+ D        G+  N     G+E   SK
Sbjct: 53  SSSLLVPSAVATPNSVLSEEAFKSLGLSDHDEYDLD------GDNNNVEADDGEELAISK 112

Query: 87  KARFLISEPLKARLKEKGITALFPIQAMTFDTVYDGSDLVRQARTGQGKTLAFVLPILES 146
            +   + + L+  L+++GIT LFPIQ         G D++ +A+TG GKTLAF +PI++ 
Sbjct: 113 LS---LPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKR 172

Query: 147 LVNGPSKSSRVIGYGRSPSVIVLLPTRELADQ---------------------------- 206
           L       +     GR P  +VL PTRELA Q                            
Sbjct: 173 LTEEAGDYTAFRRSGRLPKFLVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVSYTIQQS 232

Query: 207 -----------------DHINRNNIDIRSLKFRVLDEADEMLRMGFVEDVEFILGKVEDV 257
                            D I   ++ +  +++ VLDEAD+ML +GF E VE IL  +   
Sbjct: 233 ALTRGVDVVVGTPGRIIDLIEGRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENLP-- 292

The following BLAST results are available for this feature:

BLAST of Lcy03g001750 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39189	1.0e-63	51.62	DEAD-box ATP-dependent RNA helicase 7 OS=Arabidopsis thaliana OX=3702 GN=RH7 PE=...	[more]
Q650T9	3.4e-56	48.68	DEAD-box ATP-dependent RNA helicase 7 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
Q41382	7.6e-56	48.89	DEAD-box ATP-dependent RNA helicase 7 OS=Spinacia oleracea OX=3562 GN=RH7 PE=2 S...	[more]
Q9BQ39	6.5e-31	34.21	ATP-dependent RNA helicase DDX50 OS=Homo sapiens OX=9606 GN=DDX50 PE=1 SV=1	[more]
Q99MJ9	3.2e-30	33.69	ATP-dependent RNA helicase DDX50 OS=Mus musculus OX=10090 GN=Ddx50 PE=2 SV=1	[more]

BLAST of Lcy03g001750 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JZR9	3.5e-104	72.24	RNA helicase OS=Cucurbita maxima OX=3661 GN=LOC111491171 PE=3 SV=1	[more]
A0A6J1H389	3.5e-104	72.24	RNA helicase OS=Cucurbita moschata OX=3662 GN=LOC111459276 PE=3 SV=1	[more]
A0A6J1ESS9	4.6e-104	70.68	RNA helicase OS=Cucurbita moschata OX=3662 GN=LOC111435671 PE=3 SV=1	[more]
A0A6J1I4T2	1.0e-103	70.37	RNA helicase OS=Cucurbita maxima OX=3661 GN=LOC111469154 PE=3 SV=1	[more]
A0A1S3CTB6	3.6e-101	69.75	RNA helicase OS=Cucumis melo OX=3656 GN=LOC103504655 PE=3 SV=1	[more]

BLAST of Lcy03g001750 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023551208.1	1.9e-104	70.99	DEAD-box ATP-dependent RNA helicase 7-like [Cucurbita pepo subsp. pepo]	[more]
KAG6579664.1	1.9e-104	70.99	DEAD-box ATP-dependent RNA helicase 7, partial [Cucurbita argyrosperma subsp. so...	[more]
XP_022957864.1	7.3e-104	72.24	DEAD-box ATP-dependent RNA helicase 7-like [Cucurbita moschata] >KAG6605682.1 DE...	[more]
XP_022995722.1	7.3e-104	72.24	DEAD-box ATP-dependent RNA helicase 7-like [Cucurbita maxima]	[more]
XP_022928900.1	9.5e-104	70.68	DEAD-box ATP-dependent RNA helicase 7-like [Cucurbita moschata]	[more]

BLAST of Lcy03g001750 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G62190.1	7.1e-65	51.62	DEAD box RNA helicase (PRH75)	[more]
AT3G22330.1	1.5e-27	35.24	putative mitochondrial RNA helicase 2	[more]
AT3G22310.1	5.9e-27	34.76	putative mitochondrial RNA helicase 1	[more]
AT5G26742.1	9.1e-20	30.55	DEAD box RNA helicase (RH3)	[more]
AT5G26742.2	9.1e-20	30.55	DEAD box RNA helicase (RH3)	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 104..261 e-value: 2.2E-13 score: 60.5
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 162..251 score: 12.194107
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 179..253 e-value: 5.6E-18 score: 66.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 22..178 e-value: 3.9E-25 score: 90.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 89..246
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 109..178 e-value: 6.2E-13 score: 48.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..59
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..84
None	No IPR available	PANTHER	PTHR47958	ATP-DEPENDENT RNA HELICASE DBP3	coord: 12..178
None	No IPR available	PANTHER	PTHR47958:SF24	DEAD (ASP-GLU-ALA-ASP) BOX HELICASE 21	coord: 12..178 coord: 178..256
None	No IPR available	PANTHER	PTHR47958	ATP-DEPENDENT RNA HELICASE DBP3	coord: 178..256
None	No IPR available	CDD	cd00268	DEADc	coord: 96..246 e-value: 3.89818E-54 score: 171.856
IPR000629	ATP-dependent RNA helicase DEAD-box, conserved site	PROSITE	PS00039	DEAD_ATP_HELICASE	coord: 195..203

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy03g001750.1	Lcy03g001750.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005730	nucleolus
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003724	RNA helicase activity
molecular_function	GO:0003676	nucleic acid binding