Lcy03g001150 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy03g001150
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Retrotransposon protein
Location	Chr03: 3754492 .. 3759504 (+)
RNA-Seq Expression	Lcy03g001150
Synteny	Lcy03g001150

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGCCTTCCATTCTTTGGACTTTGGATTTGCGTGGTAGGAGACGACTGGAGTCCATTCGAGCCTGGTGGGGGGTTCTTCGAGGTTTGTTTTCTATCCTTAATGGCCGGCCGATGATGAATGCCTTCGTGCTCTGTGTCTGATCTAATTTTTTTTTTCATTCGTGGTCTCTTTGGTATCTGATTTAAGAATGTATTCTATGTTTGTTTTTTTTTTCCCCACAATTGTTGTCTGATTCAGTCTTTTCTGTGTTGTTCGAGATTTTGTTCTTCCATTTTTTTTTCCATTCTCACTTTCTCTGGTATCTGATTTAATATTATGTTACATGGTTTGTTTTTCCTATTTTTTGTTCATAACCCTTGTCTGAAACCTTATATGTGCTGTTCGAGAATGTGTTCTTCTGTTTTCTCTCCTTTTTTTTTCCATTCTCGCTCTTTTTGTTATCTGATTAAATGATGTGTTCGAAGGTTTGATTTATCCTTTTTTTTTCTGTAATCACTGTCTGATTCAACATTGTCTATGTTGTTAGAGAATGTGTTCTTACTTTTCTGTGTCATTGGAGTCGATAATAGGTTATATTTCTTTTATTTTTTGCATAATGGTTCTCTGATTCATGAGCAATAAAATTAGATCTTCTTGTTGCTTATGTATGTTCACCATGACTTTGTGATACAAATGTCCTCTTTTGCACATCTAAGTCGAAGTCCCTGCCCTCCCTGTCTGCATACAACTGTTCTGTTTTCTTTTCCTCTTGTCCATATTTTTTCTCTGATTCACAGTCTGTGCTGTTCGAGAATGTGTTCTTACTTTTCTGTTCATTGTAGTCGATGATAGGTTATATTTCTTTTCTTTTTTGCATAATGGTTCTCTGATTCATGAGCAATAAAATTAGATCTTCTTGCTGCTTATGTATGTTGACCATGATTTTGTGATACAAATGTCCTCTTTTGCACATCTAAGTGGAAGTCCCTGCCCTCCCTGTCTGCATACAATTGTTCTATTTTATTTTCCTCTTCTCCATATTTTTCTCTGATTCACAGTCATACTTGTGATCTCTGTTTCTGTGTTCAAACATTCTACATGAAATTCAATACACATGAATGAATTTCAAATACCTGAGGTCGGCCACCTTTTCCACTCTATGCATTAACATAATATTTTCCCCATCTGCACTTCATAAATGCGTTTGTTGAGTTGACATTGGCTTATTGGTAATAAATGTATATCTAATACACTATTGAGTTGACATTTGATTTTTAAAAAATGATGATTGCTTAACACAAATTCATGGTTTATTCAATGGGGATTTGACATTATTCAACACCCCTTTACCCACTATTGGAATATTGGAATGTTGGTTGGGTGCAATAAGTGCACAAACCAACATTGAAACCTACACTAGCATTCTTCTTTGTATATATATACATGTGCCATACTTTGTTCTTCAGGCAGCCCCATCTCATTCTTCTCTTCCTCTATTCACAATTGGGTTAGTCTCCTCTCTCTACCTCCATTTTTCTCAACTACTTCATACACAGTCTTTTGCTTAATACTAATGAACTATTCTCTTGCAATAGGGGTGGACTCCTTCGTGGAAGGAAACTTGTTTTCTTCACATACTCTATTTCCACATCTCCTCCTAGTAAGGTTAGTCTCGTTGTTCTTTTTGTATTGGGTAGTTGATAACAAGGTTGTAATATTCATCGTTTATTGTTTTTAGGTTTTGGAAAACATATATTCATCGACCTTACTTTGAGGTTCGTTTTATTAAAGATCGAATGTTGCTTATGTAATTAATTTATTTTACACAATTTCTTTGTTCATGTATATTCATAATTTATTTTACACAACTTTTTTTGTTAGTGTATATTGATTGTATGTGAATTTTTATTCGTATTCTGTGTAGGACATTGTATATTAAACTTGTTGAACGTGTGCGAAATCATAACATGAGATGGTGTTTTTATTATATTTGGACATCGTTTTTAATGTTTGTTTCATGGATGTTTTTTTTTTTTTTTTTTTTTTTGTTTAGAAGATTGTTTCAAAAAGACTTCATTCTGAACATTGCTTGAAAACTATGTAAATTTTAAAAACATAATATTTTTTAAAAAATAAAATTGGTTAAAAATAAAATTTTTTATAGAACAAACAATACGTTAAAAATAGAATATGTTTTAGGAAAAACAATTCATTAAAAATAGAATCTGTTTTAGAAAATACAGTCGGTTAAAATTAGAATCATATAAAAAACAGTTCGTTAAAAAAAGAATCTGTCTTAGAAATAAAATTTAAACCGAATAAGTTTTAGAAAAAACAAAGCTTGTTAAAAATAAAATCTATTTAAAAAAAAAAAAACAATTTCTTAAAAAACAGACTATTTTAGGAAAAACAATTAGTTAGGAAGAGAATCTATTTTAAGAAAAACAATTTGTTAAAAAGAGAATCCGTTTTAGAAAAAACAAATCTTTAAAAATATAATGTTTTATAAAAAATAGTTTGTGCAAAATAGTAAGTAAATACATTGTTAGAATTTGAGATGTCTTTGATAAAAATGAAAACCATAGTAAGTAAATAAAGAAAAAAAATCAGATGGTTATCCAATTTGACCTTATTTTTTCATTGTTAAAAAAAATTCATAAATGTTGAACACAATTTAAAAATGATTTTATATACGGTTTTAAAATGGGTTACAAAATTAAGAATGTATGAACATGATTTGCAGGAAAAAAAAAATTGTTATGGTTTTCGCCTTAAAATATTTATTATCAACCTACACGAATTATATTTCATTGCAATGATTTCAATATACTAATCCTTTCTTAATTTTTATTTTATGAGTAAAATAGTCCATTCGAACGTAATTTAACCGGTTAAAGTATTATACTATCCAAAAAAGAAAAAAAAAACAAATTCACACCCTATGATATTGAACTTAAAAAAAAATCAAACATAAGTTTGGGAGGAGTTTTTTTTTTTCCTCACTTTTGTGTTATTTAAAGAGGAATAGAACCAAACAAAAAATAAAAGGTGTTAATAAAAGTGTGTCAATTAAAAAAACTCACTTCCACAATCAGTTTCTTGAAACGCATGTTTTGTGTTATTTCGATATATTTTATCTCTAAAATCAAAAGTTTGAAACAAAAAAAGGTCTCAATTTTCCTTAACAAATTAATATCCTTTTAAGCCGCATTTGAATCTTGATTTATTTAATTAAACAATACCTTCGTCCATGATGATTTTTTTTCTCCTATGTAGAACTCCTAGTGTAATTATGGATCCTGATGAACTAGATCCCGATGAACTAGTGGCCATATTGACAGCCTTCACCGCAGCTCAAACTACAATTCTCCTACTATTAGATCTATATATGAACGACCATAGGAGAATAGAACACCAATCACCCTACATCCGACACCACATTAGGCAACTAGCATTCTTCAGGCTTATACACGAGTCTGACTTACGTTGTCGGGAGAGTACAAGGATGGACAGAAGATGTTTTGCCGAACTTTGCACCTTATTAAAAACAGTTGCCGGTTTATCCAGTACGGAGGTCGTAGATGTAGAAGAGATGGTTGCCATGTTCTTGCACATTGTAGCCCACGACGTTAAGAACCGAGTAGTTTGTACGCAGTTCGCTAGGTCTGGTGAGACAATTTCTAGGCATTTCAACACCGTCCTTCATGCGGTGTTACGATTGCATGATGTTCTCTTAAAAAAACCTGAGCCAGTCACAGCCTCTTGTACGGATCCAAGGTGGAAATGGTTTCAGGTATAGATAATTAATCATCCAACTTTAGTTAAGCCTAGACTCACTTCTTAGGGTTAGAACCGTGAACCAAATTTGCCTCTATTATGTGGACGCAGAATTGCCTCGGTGCGTTAGATGGAACATACATCAAGGTGAATGTTGCTGTTGTCGATCGCCCGAGGTATAGAACAAGGAAAGGTGAAATTGCAACGAACGTGCTTGTTGTCTGTGATACAAAAGGAGACTTCACATTCGTCTTACCAGGGTGGGAAGGGTCTGCCGCTGATTCCCGAGTTCTTAGAGATGCAATATCAAGACCAAACGGACTCACAGTTCCGAAGGGTAAATAATCAGATCTTTTTTCCTTTCACCGTAGAACCCTTAGGAAGGTGTATTGAGCCAATATCACATTCCACAGGCTATTATTATCTGTGCGATGCTGGGTACCCTAACGCAGAGGGTTTCCTGGCACCGTATAGAGGGGAACGTTACCACCTCTCTGAATGGCGTGGTGCGGGGAATGCACCAACTACTCCAAAAGAATTCTTTAACATGAAGCATTCATCTGCGAGGAACGTGATTGAGAGGGCATTTGGTTTGTTGAAAGGAAGGTGGGCTATCCTCCGAGGAAAATCCTACTATCCAATTCGAATTCAAGGGCGGACCATCGCAGCATGCTGCTTACTTCACAATCTTATTAATAGAGAGATGGGTGACCGTGAAATTCCTGATGAGATGGATGAGGTGGATTCTGCTTCTATTACAACTGATGGTGAGAATATCAATTTCATTGAGACTTCCGACGAATGGAGCCGGTGGAGGGATGAGTTGGCAACACAGATGTTTTCGAATTGGGAGTTACGTAATAGCTAATGGATTCATGTTGCTTTATAGAATTTAGGAATTGCTTCTTCTAGTTCAAGTATTATTCGCTGGTTGTATTAACTGTTTAGATTCTAATTGTTAATGTACTCGTGTATCTTAGTTAATGAGATTTTCATTCATGGTCTTCGTGTACATGATTTTTATTACGTTATAGTTTAGTTTAACATTTTCACACTATGCGTATTCACATAACAGAATGGCCAGTTCGTCAAGAGCTCCAAAACACATTTGGACAAAGAACGAGGACGCGAAGCTGGTGGAGTCCCTCGTGTCCTTAGTTCATGCAGGCGGTTGGAGGTCCGATAATGGGACATTCAAAGCTGGGTATTTGGGGCAGTTGGAGAATTTGATGAGGGAGAAACTGCCTGGATAG

mRNA sequence

ATGTTGCCTTCCATTCTTTGGACTTTGGATTTGCGTGGTAGGAGACGACTGGAGTCCATTCGAGCCTGGTGGGGGGTTCTTCGAGGGGTGGACTCCTTCGTGGAAGGAAACTTGTTTTCTTCACATACTCTATTTCCACATCTCCTCCTAGTAAGAACTCCTAGTGTAATTATGGATCCTGATGAACTAGATCCCGATGAACTAGTGGCCATATTGACAGCCTTCACCGCAGCTCAAACTACAATTCTCCTACTATTAGATCTATATATGAACGACCATAGGAGAATAGAACACCAATCACCCTACATCCGACACCACATTAGGCAACTAGCATTCTTCAGGCTTATACACGAGTCTGACTTACGTTGTCGGGAGAGTACAAGGATGGACAGAAGATGTTTTGCCGAACTTTGCACCTTATTAAAAACAGTTGCCGGTTTATCCAGTACGGAGGTCGTAGATGTAGAAGAGATGGTTGCCATGTTCTTGCACATTGTAGCCCACGACGTTAAGAACCGAGTAGTTTGTACGCAGTTCGCTAGGTCTGGTGAGACAATTTCTAGGCATTTCAACACCGTCCTTCATGCGGTGTTACGATTGCATGATGTTCTCTTAAAAAAACCTGAGCCAGTCACAGCCTCTTGTACGGATCCAAGGTGGAAATGGTTTCAGAATTGCCTCGGTGCGTTAGATGGAACATACATCAAGGTGAATGTTGCTGTTGTCGATCGCCCGAGGTATAGAACAAGGAAAGGTGAAATTGCAACGAACGTGCTTGTTGTCTGTGATACAAAAGGAGACTTCACATTCGTCTTACCAGGGTGGGAAGGGTCTGCCGCTGATTCCCGAGTTCTTAGAGATGCAATATCAAGACCAAACGGACTCACAGTTCCGAAGGGCTATTATTATCTGTGCGATGCTGGGTACCCTAACGCAGAGGGTTTCCTGGCACCGTATAGAGGGGAACGTTACCACCTCTCTGAATGGCGTGGTGCGGGGAATGCACCAACTACTCCAAAAGAATTCTTTAACATGAAGCATTCATCTGCGAGGAACGTGATTGAGAGGGCATTTGGTTTGTTGAAAGGAAGGTGGGCTATCCTCCGAGGAAAATCCTACTATCCAATTCGAATTCAAGGGCGGACCATCGCAGCATGCTGCTTACTTCACAATCTTATTAATAGAGAGATGGGTGACCGTGAAATTCCTGATGAGATGGATGAGGTGGATTCTGCTTCTATTACAACTGATGGTGAGAATATCAATTTCATTGAGACTTCCGACGAATGGAGCCGGTGGAGGGATGAGTTGGCAACACAGATAATGGCCAGTTCGTCAAGAGCTCCAAAACACATTTGGACAAAGAACGAGGACGCGAAGCTGGTGGAGTCCCTCGTGTCCTTAGTTCATGCAGGCGGTTGGAGGTCCGATAATGGGACATTCAAAGCTGGGTATTTGGGGCAGTTGGAGAATTTGATGAGGGAGAAACTGCCTGGATAG

Coding sequence (CDS)

ATGTTGCCTTCCATTCTTTGGACTTTGGATTTGCGTGGTAGGAGACGACTGGAGTCCATTCGAGCCTGGTGGGGGGTTCTTCGAGGGGTGGACTCCTTCGTGGAAGGAAACTTGTTTTCTTCACATACTCTATTTCCACATCTCCTCCTAGTAAGAACTCCTAGTGTAATTATGGATCCTGATGAACTAGATCCCGATGAACTAGTGGCCATATTGACAGCCTTCACCGCAGCTCAAACTACAATTCTCCTACTATTAGATCTATATATGAACGACCATAGGAGAATAGAACACCAATCACCCTACATCCGACACCACATTAGGCAACTAGCATTCTTCAGGCTTATACACGAGTCTGACTTACGTTGTCGGGAGAGTACAAGGATGGACAGAAGATGTTTTGCCGAACTTTGCACCTTATTAAAAACAGTTGCCGGTTTATCCAGTACGGAGGTCGTAGATGTAGAAGAGATGGTTGCCATGTTCTTGCACATTGTAGCCCACGACGTTAAGAACCGAGTAGTTTGTACGCAGTTCGCTAGGTCTGGTGAGACAATTTCTAGGCATTTCAACACCGTCCTTCATGCGGTGTTACGATTGCATGATGTTCTCTTAAAAAAACCTGAGCCAGTCACAGCCTCTTGTACGGATCCAAGGTGGAAATGGTTTCAGAATTGCCTCGGTGCGTTAGATGGAACATACATCAAGGTGAATGTTGCTGTTGTCGATCGCCCGAGGTATAGAACAAGGAAAGGTGAAATTGCAACGAACGTGCTTGTTGTCTGTGATACAAAAGGAGACTTCACATTCGTCTTACCAGGGTGGGAAGGGTCTGCCGCTGATTCCCGAGTTCTTAGAGATGCAATATCAAGACCAAACGGACTCACAGTTCCGAAGGGCTATTATTATCTGTGCGATGCTGGGTACCCTAACGCAGAGGGTTTCCTGGCACCGTATAGAGGGGAACGTTACCACCTCTCTGAATGGCGTGGTGCGGGGAATGCACCAACTACTCCAAAAGAATTCTTTAACATGAAGCATTCATCTGCGAGGAACGTGATTGAGAGGGCATTTGGTTTGTTGAAAGGAAGGTGGGCTATCCTCCGAGGAAAATCCTACTATCCAATTCGAATTCAAGGGCGGACCATCGCAGCATGCTGCTTACTTCACAATCTTATTAATAGAGAGATGGGTGACCGTGAAATTCCTGATGAGATGGATGAGGTGGATTCTGCTTCTATTACAACTGATGGTGAGAATATCAATTTCATTGAGACTTCCGACGAATGGAGCCGGTGGAGGGATGAGTTGGCAACACAGATAATGGCCAGTTCGTCAAGAGCTCCAAAACACATTTGGACAAAGAACGAGGACGCGAAGCTGGTGGAGTCCCTCGTGTCCTTAGTTCATGCAGGCGGTTGGAGGTCCGATAATGGGACATTCAAAGCTGGGTATTTGGGGCAGTTGGAGAATTTGATGAGGGAGAAACTGCCTGGATAG

Protein sequence

MLPSILWTLDLRGRRRLESIRAWWGVLRGVDSFVEGNLFSSHTLFPHLLLVRTPSVIMDPDELDPDELVAILTAFTAAQTTILLLLDLYMNDHRRIEHQSPYIRHHIRQLAFFRLIHESDLRCRESTRMDRRCFAELCTLLKTVAGLSSTEVVDVEEMVAMFLHIVAHDVKNRVVCTQFARSGETISRHFNTVLHAVLRLHDVLLKKPEPVTASCTDPRWKWFQNCLGALDGTYIKVNVAVVDRPRYRTRKGEIATNVLVVCDTKGDFTFVLPGWEGSAADSRVLRDAISRPNGLTVPKGYYYLCDAGYPNAEGFLAPYRGERYHLSEWRGAGNAPTTPKEFFNMKHSSARNVIERAFGLLKGRWAILRGKSYYPIRIQGRTIAACCLLHNLINREMGDREIPDEMDEVDSASITTDGENINFIETSDEWSRWRDELATQIMASSSRAPKHIWTKNEDAKLVESLVSLVHAGGWRSDNGTFKAGYLGQLENLMREKLPG

Homology

[Close]

BLAST of Lcy03g001150 vs. ExPASy TrEMBL
Match: E5GCB5 (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 610.5 bits (1573), Expect = 6.1e-171
Identity = 297/437 (67.96%), Postives = 342/437 (78.26%), Query Frame = 0


Query: 63  LDPDELVAILTAFTAAQTTILLLLDLYMNDHRRIEHQSPYIRHHIRQLAFFRLIHESDLR 122
           +D  EL +I+ AF A+Q  +LL+L+L  ND +RI H     RH IRQLA+FR+IH     
Sbjct: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIH----- 60

Query: 123 CRESTRMDRRCFAELCTLLKTVAGLSSTEVVDVEEMVAMFLHIVAHDVKNRVVCTQFARS 182
                               T+AGL+STEVVDVEEMVAMFLHI+AHDVK+RV+  +F RS
Sbjct: 61  -------------------GTIAGLTSTEVVDVEEMVAMFLHILAHDVKSRVIKREFMRS 120

Query: 183 GETISRHFNTVLHAVLRLHDVLLKKPEPVTASCTDPRWKWFQNCLGALDGTYIKVNVAVV 242
           GETISRHFN VL AV+RLH+ LLKKP+PV   CTD RW+WF+NCLGALDGTYIKVNV   
Sbjct: 121 GETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPAS 180

Query: 243 DRPRYRTRKGEIATNVLVVCDTKGDFTFVLPGWEGSAADSRVLRDAISRPNGLTVPKGYY 302
           DR RYRTRKGE+ATNVL VCDTKGDF +VL GWEGSAADSR+LRDA+SRPN L VPKGYY
Sbjct: 181 DRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKVPKGYY 240

Query: 303 YLCDAGYPNAEGFLAPYRGERYHLSEWRGAGNAPTTPKEFFNMKHSSARNVIERAFGLLK 362
           YL D GYPNAEGFLAPYRG+RYHL EWRG  NAP+T KEFFNMKH SARNVIERAFG+LK
Sbjct: 241 YLVDVGYPNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHYSARNVIERAFGVLK 300

Query: 363 GRWAILRGKSYYPIRIQGRTIAACCLLHNLINREMGDREIPDEMDEVDSASITTDGENIN 422
           GRWAILRGKSYYP+ +Q RTI ACCLLHNLINREM + +I D +DEVDS   TT  ++I+
Sbjct: 301 GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIH 360

Query: 423 FIETSDEWSRWRDELATQIMASSSRAPKHIWTKNEDAKLVESLVSLVHAGGWRSDNGTFK 482
           +IETS+EWS+WRD LA +IM SSSR PKH WTK E+A LVE LV LV+AGGWRSDNGTF+
Sbjct: 361 YIETSNEWSQWRDNLAEEIMTSSSRLPKHTWTKEEEAGLVECLVELVNAGGWRSDNGTFR 413

Query: 483 AGYLGQLENLMREKLPG 500
            GYL QL  +M  K+PG
Sbjct: 421 PGYLNQLARMMAFKIPG 413

[Close]

BLAST of Lcy03g001150 vs. ExPASy TrEMBL
Match: A0A5A7SWD8 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold515G00010 PE=3 SV=1)

HSP 1 Score: 590.5 bits (1521), Expect = 6.6e-165
Identity = 295/437 (67.51%), Postives = 334/437 (76.43%), Query Frame = 0


Query: 63  LDPDELVAILTAFTAAQTTILLLLDLYMNDHRRIEHQSPYIRHHIRQLAFFRLIHESDLR 122
           +D  EL +I+ AF A+Q  +LL+L+L  ND +RI H     RH IRQLA+FR+IH SDL 
Sbjct: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV 60

Query: 123 CRESTRMDRRCFAELCTLLKTVAGLSSTEVVDVEEMVAMFLHIVAHDVKNRVVCTQFARS 182
           CR+STRMDRRCFA LC LL+T+AGL+STEVVDVEEMVAMFLHI+AHDVKNRV+  +F RS
Sbjct: 61  CRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRS 120

Query: 183 GETISRHFNTVLHAVLRLHDVLLKKPEPVTASCTDPRWKWFQNCLGALDGTYIKVNVAVV 242
           GETISRHFN VL AV+RLHD LLKKP+PV   CTD RW+WF+NCLGALDGTYIKVNV   
Sbjct: 121 GETISRHFNMVLLAVIRLHDELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPAS 180

Query: 243 DRPRYRTRKGEIATNVLVVCDTKGDFTFVLPGWEGSAADSRVLRDAISRPNGLTVPKGYY 302
           DR RYRTRKGE+ATNVL V DTKGDF +VL GWEGSAADSR+LRDA+SRPN L VPKGYY
Sbjct: 181 DRARYRTRKGEVATNVLGVYDTKGDFVYVLTGWEGSAADSRILRDALSRPNRLKVPKGYY 240

Query: 303 YLCDAGYPNAEGFLAPYRGERYHLSEWRGAGNAPTTPKEFFNMKHSSARNVIERAFGLLK 362
           YL DAGYPNAEGFLAPYRG+RYHL EWRG  NAP+T KEFFNMKHSSARNVIERAFG+LK
Sbjct: 241 YLVDAGYPNAEGFLAPYRGQRYHLQEWRGPKNAPSTSKEFFNMKHSSARNVIERAFGVLK 300

Query: 363 GRWAILRGKSYYPIRIQGRTIAACCLLHNLINREMGDREIPDEMDEVDSASITTDGENIN 422
           GRWAILRGKSY+P+ +Q  TI ACCLLHNLINREM + +I D                 N
Sbjct: 301 GRWAILRGKSYHPVEVQCHTILACCLLHNLINREMTNFDIED-----------------N 360

Query: 423 FIETSDEWSRWRDELATQIMASSSRAPKHIWTKNEDAKLVESLVSLVHAGGWRSDNGTFK 482
            +                 M SSSR PKH WTK E+A LVE    LV+AGGWRSDNGTF+
Sbjct: 361 IVS----------------MTSSSRLPKHTWTKEEEAGLVE----LVNAGGWRSDNGTFR 400

Query: 483 AGYLGQLENLMREKLPG 500
            GYL QL  +M  K+PG
Sbjct: 421 PGYLNQLARMMAFKIPG 400

[Close]

BLAST of Lcy03g001150 vs. ExPASy TrEMBL
Match: A0A5A7TXW1 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G00370 PE=3 SV=1)

HSP 1 Score: 583.6 bits (1503), Expect = 8.0e-163
Identity = 279/379 (73.61%), Postives = 320/379 (84.43%), Query Frame = 0


Query: 63  LDPDELVAILTAFTAAQTTILLLLDLYMNDHRRIEHQSPYIRHHIRQLAFFRLIHESDLR 122
           +D  EL +I+ AF A+Q  +LL+L+L  ND +RI H     RH IRQLA+FR+IH SDL 
Sbjct: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV 60

Query: 123 CRESTRMDRRCFAELCTLLKTVAGLSSTEVVDVEEMVAMFLHIVAHDVKNRVVCTQFARS 182
           CR+STRMDRRCFA LC LL+T+AGL+STEVVDVEEMVAMFLHI+AHDVKNRV+  +F RS
Sbjct: 61  CRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRS 120

Query: 183 GETISRHFNTVLHAVLRLHDVLLKKPEPVTASCTDPRWKWFQNCLGALDGTYIKVNVAVV 242
           GETISRHFN VL AV+RLHD LLKKP+PV   CTD RW+WF+NCLGALDGTYIKVNV   
Sbjct: 121 GETISRHFNMVLLAVIRLHDELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPAS 180

Query: 243 DRPRYRTRKGEIATNVLVVCDTKGDFTFVLPGWEGSAADSRVLRDAISRPNGLTVPKGYY 302
           DR RYRTRKGE+ATNVL VCDTKGDF +VL GWEGSAADSR+LRDA+SRPN L VPKGYY
Sbjct: 181 DRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKVPKGYY 240

Query: 303 YLCDAGYPNAEGFLAPYRGERYHLSEWRGAGNAPTTPKEFFNMKHSSARNVIERAFGLLK 362
           YL DAGYPNAEGFLAPYRG+RYHL EWRG  NAP+T KEFFNMKHSSARNVIERAFG+LK
Sbjct: 241 YLVDAGYPNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLK 300

Query: 363 GRWAILRGKSYYPIRIQGRTIAACCLLHNLINREMGDREIPDEMDEVDSASITTDGENIN 422
           GRWAILRGKSYYP+ +Q RTI ACCLLHNLINREM + +I D +DEVDS   TT  ++I+
Sbjct: 301 GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIH 360

Query: 423 FIETSDEWSRWRDELATQI 442
           +IETS+EWS+WRD LA ++
Sbjct: 361 YIETSNEWSQWRDNLAEEM 379

[Close]

BLAST of Lcy03g001150 vs. ExPASy TrEMBL
Match: A0A5D3BDX0 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1112G00360 PE=3 SV=1)

HSP 1 Score: 582.0 bits (1499), Expect = 2.3e-162
Identity = 278/379 (73.35%), Postives = 320/379 (84.43%), Query Frame = 0


Query: 63  LDPDELVAILTAFTAAQTTILLLLDLYMNDHRRIEHQSPYIRHHIRQLAFFRLIHESDLR 122
           +D  EL +I+ AF A+Q  +LL+L+L  ND +RI H     RH IRQLA+FR+IH SDL 
Sbjct: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV 60

Query: 123 CRESTRMDRRCFAELCTLLKTVAGLSSTEVVDVEEMVAMFLHIVAHDVKNRVVCTQFARS 182
           CR+STRMDRRCFA LC LL+T+AGL+STEVVDVEEMVAMFLHI+AHDVKNRV+  +F RS
Sbjct: 61  CRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRS 120

Query: 183 GETISRHFNTVLHAVLRLHDVLLKKPEPVTASCTDPRWKWFQNCLGALDGTYIKVNVAVV 242
           GETISRHFN VL AV+RLH+ LLKKP+PV   CTD RW+WF+NCLGALDGTYIKVNV   
Sbjct: 121 GETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPAS 180

Query: 243 DRPRYRTRKGEIATNVLVVCDTKGDFTFVLPGWEGSAADSRVLRDAISRPNGLTVPKGYY 302
           DR RYRTRKGE+ATNVL VCDTKGDF +VL GWEGSAADSR+LRDA+SRPN L VPKGYY
Sbjct: 181 DRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKVPKGYY 240

Query: 303 YLCDAGYPNAEGFLAPYRGERYHLSEWRGAGNAPTTPKEFFNMKHSSARNVIERAFGLLK 362
           YL DAGYPNAEGFLAPYRG+RYHL EWRG  NAP+T KEFFNMKHSSARNVIERAFG+LK
Sbjct: 241 YLVDAGYPNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLK 300

Query: 363 GRWAILRGKSYYPIRIQGRTIAACCLLHNLINREMGDREIPDEMDEVDSASITTDGENIN 422
           GRWAILRGKSYYP+ +Q RTI ACCLLHNLINREM + +I D +DEVDS   TT  ++I+
Sbjct: 301 GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIH 360

Query: 423 FIETSDEWSRWRDELATQI 442
           +IETS+EWS+WRD LA ++
Sbjct: 361 YIETSNEWSQWRDNLAEEM 379

[Close]

BLAST of Lcy03g001150 vs. ExPASy TrEMBL
Match: A0A5A7U476 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G00800 PE=3 SV=1)

HSP 1 Score: 577.8 bits (1488), Expect = 4.4e-161
Identity = 277/379 (73.09%), Postives = 318/379 (83.91%), Query Frame = 0


Query: 63  LDPDELVAILTAFTAAQTTILLLLDLYMNDHRRIEHQSPYIRHHIRQLAFFRLIHESDLR 122
           +D  EL +I+ AF A+Q  +LL+L+L  ND +RI H     RH IRQLA+FR+IH SDL 
Sbjct: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV 60

Query: 123 CRESTRMDRRCFAELCTLLKTVAGLSSTEVVDVEEMVAMFLHIVAHDVKNRVVCTQFARS 182
           CR+STRMDRRCFA LC LL+T+AGL+STEVVDVEEMVAMFLHI+AHDVKNRV+  +F RS
Sbjct: 61  CRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRS 120

Query: 183 GETISRHFNTVLHAVLRLHDVLLKKPEPVTASCTDPRWKWFQNCLGALDGTYIKVNVAVV 242
           GETISRHFN VL AV+RLH+ LLKKP+PV   CTD RWKWF+NCLGALDGTYIKVNV   
Sbjct: 121 GETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWKWFENCLGALDGTYIKVNVPAS 180

Query: 243 DRPRYRTRKGEIATNVLVVCDTKGDFTFVLPGWEGSAADSRVLRDAISRPNGLTVPKGYY 302
           DR RYRTRKGE+ATNVL VCDTKGDF +VL GWEG AADSR+LRDA+SRPN L VPKGYY
Sbjct: 181 DRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEGLAADSRILRDALSRPNRLKVPKGYY 240

Query: 303 YLCDAGYPNAEGFLAPYRGERYHLSEWRGAGNAPTTPKEFFNMKHSSARNVIERAFGLLK 362
           YL DAGY NAEGFLAPYRG+RYHL EWRG  NAP+T KEFFNMKHSSARNVIERAFG+LK
Sbjct: 241 YLVDAGYQNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLK 300

Query: 363 GRWAILRGKSYYPIRIQGRTIAACCLLHNLINREMGDREIPDEMDEVDSASITTDGENIN 422
           GRWAILRGKSYYP+ +Q RTI ACCLLHNLINREM + +I D +DEVDS   TT  ++I+
Sbjct: 301 GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIH 360

Query: 423 FIETSDEWSRWRDELATQI 442
           +IETS+EWS+WRD LA ++
Sbjct: 361 YIETSNEWSQWRDNLAEEM 379

[Close]

BLAST of Lcy03g001150 vs. NCBI nr
Match: ADN34114.1 (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 610.5 bits (1573), Expect = 1.3e-170
Identity = 297/437 (67.96%), Postives = 342/437 (78.26%), Query Frame = 0


Query: 63  LDPDELVAILTAFTAAQTTILLLLDLYMNDHRRIEHQSPYIRHHIRQLAFFRLIHESDLR 122
           +D  EL +I+ AF A+Q  +LL+L+L  ND +RI H     RH IRQLA+FR+IH     
Sbjct: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIH----- 60

Query: 123 CRESTRMDRRCFAELCTLLKTVAGLSSTEVVDVEEMVAMFLHIVAHDVKNRVVCTQFARS 182
                               T+AGL+STEVVDVEEMVAMFLHI+AHDVK+RV+  +F RS
Sbjct: 61  -------------------GTIAGLTSTEVVDVEEMVAMFLHILAHDVKSRVIKREFMRS 120

Query: 183 GETISRHFNTVLHAVLRLHDVLLKKPEPVTASCTDPRWKWFQNCLGALDGTYIKVNVAVV 242
           GETISRHFN VL AV+RLH+ LLKKP+PV   CTD RW+WF+NCLGALDGTYIKVNV   
Sbjct: 121 GETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPAS 180

Query: 243 DRPRYRTRKGEIATNVLVVCDTKGDFTFVLPGWEGSAADSRVLRDAISRPNGLTVPKGYY 302
           DR RYRTRKGE+ATNVL VCDTKGDF +VL GWEGSAADSR+LRDA+SRPN L VPKGYY
Sbjct: 181 DRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKVPKGYY 240

Query: 303 YLCDAGYPNAEGFLAPYRGERYHLSEWRGAGNAPTTPKEFFNMKHSSARNVIERAFGLLK 362
           YL D GYPNAEGFLAPYRG+RYHL EWRG  NAP+T KEFFNMKH SARNVIERAFG+LK
Sbjct: 241 YLVDVGYPNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHYSARNVIERAFGVLK 300

Query: 363 GRWAILRGKSYYPIRIQGRTIAACCLLHNLINREMGDREIPDEMDEVDSASITTDGENIN 422
           GRWAILRGKSYYP+ +Q RTI ACCLLHNLINREM + +I D +DEVDS   TT  ++I+
Sbjct: 301 GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIH 360

Query: 423 FIETSDEWSRWRDELATQIMASSSRAPKHIWTKNEDAKLVESLVSLVHAGGWRSDNGTFK 482
           +IETS+EWS+WRD LA +IM SSSR PKH WTK E+A LVE LV LV+AGGWRSDNGTF+
Sbjct: 361 YIETSNEWSQWRDNLAEEIMTSSSRLPKHTWTKEEEAGLVECLVELVNAGGWRSDNGTFR 413

Query: 483 AGYLGQLENLMREKLPG 500
            GYL QL  +M  K+PG
Sbjct: 421 PGYLNQLARMMAFKIPG 413

[Close]

BLAST of Lcy03g001150 vs. NCBI nr
Match: KAA0034843.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 590.5 bits (1521), Expect = 1.4e-164
Identity = 295/437 (67.51%), Postives = 334/437 (76.43%), Query Frame = 0


Query: 63  LDPDELVAILTAFTAAQTTILLLLDLYMNDHRRIEHQSPYIRHHIRQLAFFRLIHESDLR 122
           +D  EL +I+ AF A+Q  +LL+L+L  ND +RI H     RH IRQLA+FR+IH SDL 
Sbjct: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV 60

Query: 123 CRESTRMDRRCFAELCTLLKTVAGLSSTEVVDVEEMVAMFLHIVAHDVKNRVVCTQFARS 182
           CR+STRMDRRCFA LC LL+T+AGL+STEVVDVEEMVAMFLHI+AHDVKNRV+  +F RS
Sbjct: 61  CRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRS 120

Query: 183 GETISRHFNTVLHAVLRLHDVLLKKPEPVTASCTDPRWKWFQNCLGALDGTYIKVNVAVV 242
           GETISRHFN VL AV+RLHD LLKKP+PV   CTD RW+WF+NCLGALDGTYIKVNV   
Sbjct: 121 GETISRHFNMVLLAVIRLHDELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPAS 180

Query: 243 DRPRYRTRKGEIATNVLVVCDTKGDFTFVLPGWEGSAADSRVLRDAISRPNGLTVPKGYY 302
           DR RYRTRKGE+ATNVL V DTKGDF +VL GWEGSAADSR+LRDA+SRPN L VPKGYY
Sbjct: 181 DRARYRTRKGEVATNVLGVYDTKGDFVYVLTGWEGSAADSRILRDALSRPNRLKVPKGYY 240

Query: 303 YLCDAGYPNAEGFLAPYRGERYHLSEWRGAGNAPTTPKEFFNMKHSSARNVIERAFGLLK 362
           YL DAGYPNAEGFLAPYRG+RYHL EWRG  NAP+T KEFFNMKHSSARNVIERAFG+LK
Sbjct: 241 YLVDAGYPNAEGFLAPYRGQRYHLQEWRGPKNAPSTSKEFFNMKHSSARNVIERAFGVLK 300

Query: 363 GRWAILRGKSYYPIRIQGRTIAACCLLHNLINREMGDREIPDEMDEVDSASITTDGENIN 422
           GRWAILRGKSY+P+ +Q  TI ACCLLHNLINREM + +I D                 N
Sbjct: 301 GRWAILRGKSYHPVEVQCHTILACCLLHNLINREMTNFDIED-----------------N 360

Query: 423 FIETSDEWSRWRDELATQIMASSSRAPKHIWTKNEDAKLVESLVSLVHAGGWRSDNGTFK 482
            +                 M SSSR PKH WTK E+A LVE    LV+AGGWRSDNGTF+
Sbjct: 361 IVS----------------MTSSSRLPKHTWTKEEEAGLVE----LVNAGGWRSDNGTFR 400

Query: 483 AGYLGQLENLMREKLPG 500
            GYL QL  +M  K+PG
Sbjct: 421 PGYLNQLARMMAFKIPG 400

[Close]

BLAST of Lcy03g001150 vs. NCBI nr
Match: KAA0046727.1 (retrotransposon protein [Cucumis melo var. makuwa] >KAA0052100.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0056032.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0059561.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0065497.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 583.6 bits (1503), Expect = 1.7e-162
Identity = 279/379 (73.61%), Postives = 320/379 (84.43%), Query Frame = 0


Query: 63  LDPDELVAILTAFTAAQTTILLLLDLYMNDHRRIEHQSPYIRHHIRQLAFFRLIHESDLR 122
           +D  EL +I+ AF A+Q  +LL+L+L  ND +RI H     RH IRQLA+FR+IH SDL 
Sbjct: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV 60

Query: 123 CRESTRMDRRCFAELCTLLKTVAGLSSTEVVDVEEMVAMFLHIVAHDVKNRVVCTQFARS 182
           CR+STRMDRRCFA LC LL+T+AGL+STEVVDVEEMVAMFLHI+AHDVKNRV+  +F RS
Sbjct: 61  CRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRS 120

Query: 183 GETISRHFNTVLHAVLRLHDVLLKKPEPVTASCTDPRWKWFQNCLGALDGTYIKVNVAVV 242
           GETISRHFN VL AV+RLHD LLKKP+PV   CTD RW+WF+NCLGALDGTYIKVNV   
Sbjct: 121 GETISRHFNMVLLAVIRLHDELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPAS 180

Query: 243 DRPRYRTRKGEIATNVLVVCDTKGDFTFVLPGWEGSAADSRVLRDAISRPNGLTVPKGYY 302
           DR RYRTRKGE+ATNVL VCDTKGDF +VL GWEGSAADSR+LRDA+SRPN L VPKGYY
Sbjct: 181 DRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKVPKGYY 240

Query: 303 YLCDAGYPNAEGFLAPYRGERYHLSEWRGAGNAPTTPKEFFNMKHSSARNVIERAFGLLK 362
           YL DAGYPNAEGFLAPYRG+RYHL EWRG  NAP+T KEFFNMKHSSARNVIERAFG+LK
Sbjct: 241 YLVDAGYPNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLK 300

Query: 363 GRWAILRGKSYYPIRIQGRTIAACCLLHNLINREMGDREIPDEMDEVDSASITTDGENIN 422
           GRWAILRGKSYYP+ +Q RTI ACCLLHNLINREM + +I D +DEVDS   TT  ++I+
Sbjct: 301 GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIH 360

Query: 423 FIETSDEWSRWRDELATQI 442
           +IETS+EWS+WRD LA ++
Sbjct: 361 YIETSNEWSQWRDNLAEEM 379

[Close]

BLAST of Lcy03g001150 vs. NCBI nr
Match: KAA0035620.1 (retrotransposon protein [Cucumis melo var. makuwa] >KAA0038121.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0041646.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0047363.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0048378.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 582.0 bits (1499), Expect = 4.8e-162
Identity = 278/379 (73.35%), Postives = 320/379 (84.43%), Query Frame = 0


Query: 63  LDPDELVAILTAFTAAQTTILLLLDLYMNDHRRIEHQSPYIRHHIRQLAFFRLIHESDLR 122
           +D  EL +I+ AF A+Q  +LL+L+L  ND +RI H     RH IRQLA+FR+IH SDL 
Sbjct: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV 60

Query: 123 CRESTRMDRRCFAELCTLLKTVAGLSSTEVVDVEEMVAMFLHIVAHDVKNRVVCTQFARS 182
           CR+STRMDRRCFA LC LL+T+AGL+STEVVDVEEMVAMFLHI+AHDVKNRV+  +F RS
Sbjct: 61  CRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRS 120

Query: 183 GETISRHFNTVLHAVLRLHDVLLKKPEPVTASCTDPRWKWFQNCLGALDGTYIKVNVAVV 242
           GETISRHFN VL AV+RLH+ LLKKP+PV   CTD RW+WF+NCLGALDGTYIKVNV   
Sbjct: 121 GETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPAS 180

Query: 243 DRPRYRTRKGEIATNVLVVCDTKGDFTFVLPGWEGSAADSRVLRDAISRPNGLTVPKGYY 302
           DR RYRTRKGE+ATNVL VCDTKGDF +VL GWEGSAADSR+LRDA+SRPN L VPKGYY
Sbjct: 181 DRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKVPKGYY 240

Query: 303 YLCDAGYPNAEGFLAPYRGERYHLSEWRGAGNAPTTPKEFFNMKHSSARNVIERAFGLLK 362
           YL DAGYPNAEGFLAPYRG+RYHL EWRG  NAP+T KEFFNMKHSSARNVIERAFG+LK
Sbjct: 241 YLVDAGYPNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLK 300

Query: 363 GRWAILRGKSYYPIRIQGRTIAACCLLHNLINREMGDREIPDEMDEVDSASITTDGENIN 422
           GRWAILRGKSYYP+ +Q RTI ACCLLHNLINREM + +I D +DEVDS   TT  ++I+
Sbjct: 301 GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIH 360

Query: 423 FIETSDEWSRWRDELATQI 442
           +IETS+EWS+WRD LA ++
Sbjct: 361 YIETSNEWSQWRDNLAEEM 379

[Close]

BLAST of Lcy03g001150 vs. NCBI nr
Match: KAA0048361.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 577.8 bits (1488), Expect = 9.1e-161
Identity = 277/379 (73.09%), Postives = 318/379 (83.91%), Query Frame = 0


Query: 63  LDPDELVAILTAFTAAQTTILLLLDLYMNDHRRIEHQSPYIRHHIRQLAFFRLIHESDLR 122
           +D  EL +I+ AF A+Q  +LL+L+L  ND +RI H     RH IRQLA+FR+IH SDL 
Sbjct: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV 60

Query: 123 CRESTRMDRRCFAELCTLLKTVAGLSSTEVVDVEEMVAMFLHIVAHDVKNRVVCTQFARS 182
           CR+STRMDRRCFA LC LL+T+AGL+STEVVDVEEMVAMFLHI+AHDVKNRV+  +F RS
Sbjct: 61  CRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRS 120

Query: 183 GETISRHFNTVLHAVLRLHDVLLKKPEPVTASCTDPRWKWFQNCLGALDGTYIKVNVAVV 242
           GETISRHFN VL AV+RLH+ LLKKP+PV   CTD RWKWF+NCLGALDGTYIKVNV   
Sbjct: 121 GETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWKWFENCLGALDGTYIKVNVPAS 180

Query: 243 DRPRYRTRKGEIATNVLVVCDTKGDFTFVLPGWEGSAADSRVLRDAISRPNGLTVPKGYY 302
           DR RYRTRKGE+ATNVL VCDTKGDF +VL GWEG AADSR+LRDA+SRPN L VPKGYY
Sbjct: 181 DRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEGLAADSRILRDALSRPNRLKVPKGYY 240

Query: 303 YLCDAGYPNAEGFLAPYRGERYHLSEWRGAGNAPTTPKEFFNMKHSSARNVIERAFGLLK 362
           YL DAGY NAEGFLAPYRG+RYHL EWRG  NAP+T KEFFNMKHSSARNVIERAFG+LK
Sbjct: 241 YLVDAGYQNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLK 300

Query: 363 GRWAILRGKSYYPIRIQGRTIAACCLLHNLINREMGDREIPDEMDEVDSASITTDGENIN 422
           GRWAILRGKSYYP+ +Q RTI ACCLLHNLINREM + +I D +DEVDS   TT  ++I+
Sbjct: 301 GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIH 360

Query: 423 FIETSDEWSRWRDELATQI 442
           +IETS+EWS+WRD LA ++
Sbjct: 361 YIETSNEWSQWRDNLAEEM 379

[Close]

BLAST of Lcy03g001150 vs. TAIR 10
Match: AT5G41980.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 199.5 bits (506), Expect = 6.3e-51
Identity = 118/344 (34.30%), Postives = 180/344 (52.33%), Query Frame = 0


Query: 113 FRLIHESDLRCRESTRMDRRCFAELCTLLKTVAGLSSTEVVDVEEMVAMFLHIVAHDVKN 172
           +++++  + +C E+ RMD+  F +LC LL+T   L  T  + +E  +A+FL I+ H+++ 
Sbjct: 32  YQILNGPNEQCFENFRMDKPVFYKLCDLLQTRGLLRHTNRIKIEAQLAIFLFIIGHNLRT 91

Query: 173 RVVCTQFARSGETISRHFNTVLHAVLRL-HDVLLKKPEPVTASCTDPRWKWFQNCLGALD 232
           R V   F  SGETISRHFN VL+AV+ +  D         T    DP   +F++C+G +D
Sbjct: 92  RAVQELFCYSGETISRHFNNVLNAVIAISKDFFQPNSNSDTLENDDP---YFKDCVGVVD 151

Query: 233 GTYIKVNVAVVDRPRYRTRKGEIATNVLVVCDTKGDFTFVLPGWEGSAADSRVLRDAISR 292
             +I V V V ++  +R   G +  NVL        F +VL GWEGSA+D +VL  A++R
Sbjct: 152 SFHIPVMVGVDEQGPFRNGNGLLTQNVLAASSFDLRFNYVLAGWEGSASDQQVLNAALTR 211

Query: 293 PNGLTVPKGYYYLCDAGYPNAEGFLAPYRGERYHLSEWRGAGNAPTTPKEFFNMKHSSAR 352
            N L VP+G YY+ D  YPN  GF+APY G          + N+    KE FN +H    
Sbjct: 212 RNKLQVPQGKYYIVDNKYPNLPGFIAPYHGV---------STNSREEAKEMFNERHKLLH 271

Query: 353 NVIERAFGLLKGRWAILRGKSYYPIRIQGRTIAACCLLHNLINREMGD----REIPDE-- 412
             I R FG LK R+ IL     YP++ Q + + A C LHN +  E  D    R   +E  
Sbjct: 272 RAIHRTFGALKERFPILLSAPPYPLQTQVKLVIAACALHNYVRLEKPDDLVFRMFEEETL 331

Query: 413 MDEVDSASITTDGENINFI--------ETSDEWSRWRDELATQI 442
            +  +   +  + E +  +        E  ++  R RDE+A+++
Sbjct: 332 AEAGEDREVALEEEQVEIVGQEHGFRPEEVEDSLRLRDEIASEL 363

[Close]

BLAST of Lcy03g001150 vs. TAIR 10
Match: AT1G43722.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28730.1); Has 924 Blast hits to 912 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 222; Fungi - 31; Plants - 661; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 151.8 bits (382), Expect = 1.5e-36
Identity = 92/265 (34.72%), Postives = 131/265 (49.43%), Query Frame = 0


Query: 113 FRLIHESDLRCRESTRMDRRCFAELCTLLKTVAGLSSTEVVDVEEMVAMFLHIVAHDVKN 172
           +R + +    C +  RM   CF  LC +L+T   L  T  + +EE VAMFL I  H+   
Sbjct: 56  WRRLQQDAAACLQLLRMSLPCFTTLCNMLQTNYDLQPTLNISIEESVAMFLRICGHNEVY 115

Query: 173 RVVCTQFARSGETISRHFNTVLHAVLRLHDVLLKKPE-------PVTASCTDPRWKWFQN 232
           R V  +F R+ ET+ R F  VL A   L    ++ P        P         W +F  
Sbjct: 116 RDVGLRFGRNQETVQRKFREVLTATELLACDYIRTPTRQELYRIPERLQVDQRYWPYFSG 175

Query: 233 CLGALDGTYIKVNVAVVDRPRYRTRKGEIATNVLVVCDTKGDFTFVLPGWEGSAADSRVL 292
            +GA+DGT++ V V    +  Y  R    + N++ +CD K  FT++  G  GS  D+ VL
Sbjct: 176 FVGAMDGTHVCVKVKPDLQGMYWNRHDNASLNIMAICDLKMLFTYIWNGAPGSCYDTAVL 235

Query: 293 RDAISRPNGLTVPKG-YYYLCDAGYPNAEGFLAPYRGE-----RYHLSEWRGAGNAPTTP 352
           + A    +   +P    YYL D+GYPN +G LAPYR       RYH+S++   G  P   
Sbjct: 236 QIAQQSDSEFPLPPSEKYYLVDSGYPNKQGLLAPYRSSRNRVVRYHMSQFY-YGPRPRNK 295

Query: 353 KEFFNMKHSSARNVIERAFGLLKGR 365
            E FN  H+S R+VIER F + K +
Sbjct: 296 HELFNQCHTSLRSVIERTFRIWKNK 319

[Close]

BLAST of Lcy03g001150 vs. TAIR 10
Match: AT5G35695.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41980.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 127.1 bits (318), Expect = 4.0e-29
Identity = 66/164 (40.24%), Postives = 91/164 (55.49%), Query Frame = 0


Query: 268 FTFVLPGWEGSAADSRVLRDAISRPNGLTVPKGYYYLCDAGYPNAEGFLAPYRGERYHLS 327
           F +VL GWEGSA DSRVL DA+ +          +YL D G+ N   FLAP+RG RYHL 
Sbjct: 25  FIYVLSGWEGSAHDSRVLSDALRK----------FYLVDCGFANRLNFLAPFRGVRYHLQ 84

Query: 328 EWRGAGNAPTTPKEFFNMKHSSARNVIERAFGLLKGRWAILRGKSYYPIRIQGRTIAACC 387
           E+ G    P TP E FN++H S RNVIER FG+ K R+AI +    +  + Q   +  C 
Sbjct: 85  EFAGQRRDPETPHELFNLRHVSLRNVIERIFGIFKSRFAIFKSAPPFSYKKQAGLVLTCA 144

Query: 388 LLHNLINRE--MGDREIPDEMDEVDSASITTDGENINFIETSDE 430
            LHN + +E    + + PDE+   +   +  +G  +N  E  +E
Sbjct: 145 ALHNFLRKECRSDEADFPDEVGN-EGDVVNNEGNAMNTNEIDNE 177

[Close]

BLAST of Lcy03g001150 vs. TAIR 10
Match: AT5G28730.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 496 Blast hits to 496 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 23; Plants - 470; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 96.7 bits (239), Expect = 5.7e-20
Identity = 71/215 (33.02%), Postives = 100/215 (46.51%), Query Frame = 0


Query: 116 IHESDLRCRESTRMDRRCFAELCTLLKTVAGLSSTEVVDVEEMVAMFLHIVAHDVKNRVV 175
           I+ +++ C+   RM    F +LC +L    GL S+  + ++E VA+FL I A +   R +
Sbjct: 17  IYSNEVSCQTLIRMSSEAFTQLCEILHGKYGLQSSTNISLDESVAIFLIICASNDTQRDI 76

Query: 176 CTQFARSGETISRHFNTVLHAVLRL--HDVLLKKPEPVTASCT----DPR-WKWFQNCLG 235
             +F  + ETI R F+ VL A+ RL    +  +K E + A       D R W +  + LG
Sbjct: 77  ALRFGHAQETIWRKFHDVLKAMERLAVEYIRPRKVEELRAISNRLQDDTRYWPFLMDLLG 136

Query: 236 ALDGTYIKVNVAVVDRPRYRTRKGEIATNVLVVCDTKGDFTFVLPGWEGSAADSRVLRDA 295
                                     + NVL +CD    FT+   G  GS  D+RVL  A
Sbjct: 137 I------------------------ASFNVLAICDLDMLFTYCFVGMAGSTHDARVLSAA 196

Query: 296 IS-RPNGLTVPKGYYYLCDAGYPNAEGFLAPYRGE 323
           IS  P     P   YYL D+GY N  G+LAPYR E
Sbjct: 197 ISDDPLFHVPPDSKYYLVDSGYANKRGYLAPYRRE 207

[Close]

BLAST of Lcy03g001150 vs. TAIR 10
Match: AT5G12010.1 (unknown protein; INVOLVED IN: response to salt stress; LOCATED IN: chloroplast, plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G29780.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 93.6 bits (231), Expect = 4.9e-19
Identity = 80/302 (26.49%), Postives = 134/302 (44.37%), Query Frame = 0


Query: 124 RESTRMDRRCFAELCTLLKTVAGLSST---EVVDVEEMVAMFLHIVAHDVKNRVVCTQFA 183
           +++ RM +  F  +C  L +      T     + V + VA+ +  +A     R+V  +F 
Sbjct: 176 KKAFRMSKSTFELICDELNSAVAKEDTALRNAIPVRQRVAVCIWRLATGEPLRLVSKKF- 235

Query: 184 RSGETISRHFNTVLHAVLRLHDVLLKK----PEPVTASCTDPRWK---WFQNCLGALDGT 243
             G  IS     VL     + DVL+ K    P+  +      R++      N +G++  T
Sbjct: 236 --GLGISTCHKLVLEVCKAIKDVLMPKYLQWPDDESLRNIRERFESVSGIPNVVGSMYTT 295

Query: 244 YI-----KVNVAVVDRPRY--RTRKGEIATNVLVVCDTKGDFTFVLPGWEGSAADSRVLR 303
           +I     K++VA     R+  R +K   +  +  V + KG FT +  GW GS  D +VL 
Sbjct: 296 HIPIIAPKISVASYFNKRHTERNQKTSYSITIQAVVNPKGVFTDLCIGWPGSMPDDKVLE 355

Query: 304 DAI--SRPNGLTVPKGYYYLCDAGYPNAEGFLAPYRGERYHLSEWRGAGNAPTTPKEFFN 363
            ++   R N   + KG +     G+P  +  L PY  +              T  +  FN
Sbjct: 356 KSLLYQRANNGGLLKGMWVAGGPGHPLLDWVLVPYTQQNL------------TWTQHAFN 415

Query: 364 MKHSSARNVIERAFGLLKGRWAILRGKSYYPIRIQGRTIAACCLLHNLINREMGDREIPD 407
            K S  + V + AFG LKGRWA L+ ++   ++     + ACC+LHN+   EM + ++  
Sbjct: 416 EKMSEVQGVAKEAFGRLKGRWACLQKRTEVKLQDLPTVLGACCVLHNIC--EMREEKMEP 460

The following BLAST results are available for this feature:

BLAST of Lcy03g001150 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy03g001150 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
E5GCB5	6.1e-171	67.96	Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1	[more]
A0A5A7SWD8	6.6e-165	67.51	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7TXW1	8.0e-163	73.61	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3BDX0	2.3e-162	73.35	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7U476	4.4e-161	73.09	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of Lcy03g001150 vs. NCBI nr


Match Name	E-value	Identity	Description
ADN34114.1	1.3e-170	67.96	retrotransposon protein [Cucumis melo subsp. melo]	[more]
KAA0034843.1	1.4e-164	67.51	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0046727.1	1.7e-162	73.61	retrotransposon protein [Cucumis melo var. makuwa] >KAA0052100.1 retrotransposon...	[more]
KAA0035620.1	4.8e-162	73.35	retrotransposon protein [Cucumis melo var. makuwa] >KAA0038121.1 retrotransposon...	[more]
KAA0048361.1	9.1e-161	73.09	retrotransposon protein [Cucumis melo var. makuwa]	[more]

BLAST of Lcy03g001150 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G41980.1	6.3e-51	34.30	CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (Int...	[more]
AT1G43722.1	1.5e-36	34.72	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G35695.1	4.0e-29	40.24	CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (Int...	[more]
AT5G28730.1	5.7e-20	33.02	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G12010.1	4.9e-19	26.49	unknown protein; INVOLVED IN: response to salt stress; LOCATED IN: chloroplast, ...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027806	Harbinger transposase-derived nuclease domain	PFAM	PF13359	DDE_Tnp_4	coord: 230..391 e-value: 3.9E-25 score: 88.4
None	No IPR available	PANTHER	PTHR22930:SF201	NUCLEASE HARBI1-LIKE PROTEIN	coord: 56..463
None	No IPR available	PANTHER	PTHR22930	UNCHARACTERIZED	coord: 56..463

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy03g001150.1	Lcy03g001150.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding