Lcy03g000400 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGACAAAATATTTGGAGGTTGGTCGTTCTTATAGACCGAAGGACATCATAAGTAATGTGAGGCAAAAGTTCGGTGTGAATCTGAGTTATGACAAGCCATGGAGGGCTAGAGAACATGCCTTGGTTCTTGCCAGAGGCTCGCCTGAAGAGTCCTACAAACAGTTACCACGGTTTGGAGAAGCGTTGAAAATTGAAAATCCTGGTTCATTTTTTTACTTGGAAGTGGACGAGGACCGTTACTTCAAGCATGTGTTCATGGCAATTGGGTCCATGATTAAAGGGTTCTTGAACTCTATTCCTTCGATTTTGGTAGTAGATGAGACCTACATGAGGGGTAAGTTCAGTGGAAAGCTCCTAACTGCAGTAGGCATCGATGGCAATAACCAAATATACCCCGTAGGGTTTGGCATTGGGAGTGGAGAAACTGATGAATCGTGGACCTACTTTTTCCGGCAAATCGAGAGTGTTATTGGTAAACTTCATCCCCTAGTGATTGTATCTGATAGACACAAAAGCATATGCAAGGCAGTATACGGACTGTGTTTCCTAATGCAGCCCACTGCTACTGTATCCACCATTTACAAGAGAACTTGAAAACAAAGTTCAAGGATCACGGCTTTATTCCACTCTACCTTAAAGCAGCGAAGGCATTTCATGATACATAGTTTCAGGAATATTGGATCAAAGTTCCAATACGTGCCCAAAAATACTTGGAAGAAGTCGGACTTGAACATTGGTCGCGTGTTTATCAGTGTGGAATGAGATACAATCAAATGACCACGAACATTGCGGAATCTTTTAACTCCCTCTTGAAAGATGCGAGAGAGTTACCAATAACGGGTCTTCTTGATCACATTAGGGGATGGTTGAAAGCCACTTACTACGACCATCGTCCCGGTGCAGCAAAATGGGATGCACCAATATCAAAATATGGTGAAGAAATTGTTCTAGCAGCGGAGAAGTATGCGAGAAGGCATGTGGTTAGGCCAATTGACCGGTACGAATTCCAAGTCGACGATGGACACTTGGGTGGTCGTATCAACATCCACACGAGGACGTGTACTTGTCGTGAATTCGTCTGCCTCTAA ATGAAGACAAAATATTTGGAGGTTGGTCGTTCTTATAGACCGAAGGACATCATAAGTAATGTGAGGCAAAAGTTCGGTGTGAATCTGAGTTATGACAAGCCATGGAGGGCTAGAGAACATGCCTTGGTTCTTGCCAGAGGCTCGCCTGAAGAGTCCTACAAACAGTTACCACGGTTTGGAGAAGCGTTGAAAATTGAAAATCCTGGTTCATTTTTTTACTTGGAAGTGGACGAGGACCGTTACTTCAAGCATGTGTTCATGGCAATTGGGTCCATGATTAAAGGGTTCTTGAACTCTATTCCTTCGATTTTGGTAGTAGATGAGACCTACATGAGGGGTAAGTTCAGTGGAAAGCTCCTAACTGCAGTAGGCATCGATGGCAATAACCAAATATACCCCGTAGGGTTTGGCATTGGGAGTGGAGAAACTGATGAATCGTGGACCTACTTTTTCCGGCAAATCGAGAGTGTTATTGGTAAACTTCATCCCCTAGTGATTGTATCTGATAGACACAAAAGCATATGCAAGGCAGTATACGGACTGTGTTTCCTAATGCAGCCCACTGCTACTTGTGGAATGAGATACAATCAAATGACCACGAACATTGCGGAATCTTTTAACTCCCTCTTGAAAGATGCGAGAGAGTTACCAATAACGGGTCTTCTTGATCACATTAGGGGATGGTTGAAAGCCACTTACTACGACCATCGTCCCGGTGCAGCAAAATGGGATGCACCAATATCAAAATATGGTGAAGAAATTGTTCTAGCAGCGGAGAAGTATGCGAGAAGGCATGTGGTTAGGCCAATTGACCGGTACGAATTCCAAGTCGACGATGGACACTTGGGTGGTCGTATCAACATCCACACGAGGACGTGTACTTGTCGTGAATTCGTCTGCCTCTAA ATGAAGACAAAATATTTGGAGGTTGGTCGTTCTTATAGACCGAAGGACATCATAAGTAATGTGAGGCAAAAGTTCGGTGTGAATCTGAGTTATGACAAGCCATGGAGGGCTAGAGAACATGCCTTGGTTCTTGCCAGAGGCTCGCCTGAAGAGTCCTACAAACAGTTACCACGGTTTGGAGAAGCGTTGAAAATTGAAAATCCTGGTTCATTTTTTTACTTGGAAGTGGACGAGGACCGTTACTTCAAGCATGTGTTCATGGCAATTGGGTCCATGATTAAAGGGTTCTTGAACTCTATTCCTTCGATTTTGGTAGTAGATGAGACCTACATGAGGGGTAAGTTCAGTGGAAAGCTCCTAACTGCAGTAGGCATCGATGGCAATAACCAAATATACCCCGTAGGGTTTGGCATTGGGAGTGGAGAAACTGATGAATCGTGGACCTACTTTTTCCGGCAAATCGAGAGTGTTATTGGTAAACTTCATCCCCTAGTGATTGTATCTGATAGACACAAAAGCATATGCAAGGCAGTATACGGACTGTGTTTCCTAATGCAGCCCACTGCTACTTGTGGAATGAGATACAATCAAATGACCACGAACATTGCGGAATCTTTTAACTCCCTCTTGAAAGATGCGAGAGAGTTACCAATAACGGGTCTTCTTGATCACATTAGGGGATGGTTGAAAGCCACTTACTACGACCATCGTCCCGGTGCAGCAAAATGGGATGCACCAATATCAAAATATGGTGAAGAAATTGTTCTAGCAGCGGAGAAGTATGCGAGAAGGCATGTGGTTAGGCCAATTGACCGGTACGAATTCCAAGTCGACGATGGACACTTGGGTGGTCGTATCAACATCCACACGAGGACGTGTACTTGTCGTGAATTCGTCTGCCTCTAA MKTKYLEVGRSYRPKDIISNVRQKFGVNLSYDKPWRAREHALVLARGSPEESYKQLPRFGEALKIENPGSFFYLEVDEDRYFKHVFMAIGSMIKGFLNSIPSILVVDETYMRGKFSGKLLTAVGIDGNNQIYPVGFGIGSGETDESWTYFFRQIESVIGKLHPLVIVSDRHKSICKAVYGLCFLMQPTATCGMRYNQMTTNIAESFNSLLKDARELPITGLLDHIRGWLKATYYDHRPGAAKWDAPISKYGEEIVLAAEKYARRHVVRPIDRYEFQVDDGHLGGRINIHTRTCTCREFVCL Homology
BLAST of Lcy03g000400 vs. ExPASy Swiss-Prot
Match: Q9ZVC9 (Protein FAR1-RELATED SEQUENCE 3 OS=Arabidopsis thaliana OX=3702 GN=FRS3 PE=1 SV=2) HSP 1 Score: 46.6 bits (109), Expect = 5.8e-04 Identity = 27/119 (22.69%), Postives = 56/119 (47.06%), Query Frame = 0
BLAST of Lcy03g000400 vs. ExPASy TrEMBL
Match: A0A6J1BRM2 (protein FAR1-RELATED SEQUENCE 4-like OS=Momordica charantia OX=3673 GN=LOC111004779 PE=4 SV=1) HSP 1 Score: 294.7 bits (753), Expect = 4.5e-76 Identity = 149/361 (41.27%), Postives = 216/361 (59.83%), Query Frame = 0
BLAST of Lcy03g000400 vs. ExPASy TrEMBL
Match: A0A6J1CVL4 (uncharacterized protein LOC111015181 OS=Momordica charantia OX=3673 GN=LOC111015181 PE=4 SV=1) HSP 1 Score: 285.0 bits (728), Expect = 3.6e-73 Identity = 150/354 (42.37%), Postives = 201/354 (56.78%), Query Frame = 0
BLAST of Lcy03g000400 vs. ExPASy TrEMBL
Match: A0A6J1DJT1 (uncharacterized protein LOC111020715 OS=Momordica charantia OX=3673 GN=LOC111020715 PE=4 SV=1) HSP 1 Score: 281.6 bits (719), Expect = 3.9e-72 Identity = 154/363 (42.42%), Postives = 204/363 (56.20%), Query Frame = 0
BLAST of Lcy03g000400 vs. ExPASy TrEMBL
Match: A0A6J1DLB0 (uncharacterized protein LOC111021969 OS=Momordica charantia OX=3673 GN=LOC111021969 PE=4 SV=1) HSP 1 Score: 276.6 bits (706), Expect = 1.3e-70 Identity = 143/362 (39.50%), Postives = 206/362 (56.91%), Query Frame = 0
BLAST of Lcy03g000400 vs. ExPASy TrEMBL
Match: A0A6J1D278 (uncharacterized protein LOC111016623 OS=Momordica charantia OX=3673 GN=LOC111016623 PE=4 SV=1) HSP 1 Score: 273.9 bits (699), Expect = 8.2e-70 Identity = 139/361 (38.50%), Postives = 212/361 (58.73%), Query Frame = 0
BLAST of Lcy03g000400 vs. NCBI nr
Match: XP_022131652.1 (protein FAR1-RELATED SEQUENCE 4-like [Momordica charantia]) HSP 1 Score: 294.7 bits (753), Expect = 9.3e-76 Identity = 149/361 (41.27%), Postives = 216/361 (59.83%), Query Frame = 0
BLAST of Lcy03g000400 vs. NCBI nr
Match: XP_038887209.1 (uncharacterized protein LOC120077397 [Benincasa hispida]) HSP 1 Score: 285.4 bits (729), Expect = 5.6e-73 Identity = 153/330 (46.36%), Postives = 206/330 (62.42%), Query Frame = 0
BLAST of Lcy03g000400 vs. NCBI nr
Match: XP_022145820.1 (uncharacterized protein LOC111015181 [Momordica charantia]) HSP 1 Score: 285.0 bits (728), Expect = 7.4e-73 Identity = 150/354 (42.37%), Postives = 201/354 (56.78%), Query Frame = 0
BLAST of Lcy03g000400 vs. NCBI nr
Match: XP_022153146.1 (uncharacterized protein LOC111020715 [Momordica charantia]) HSP 1 Score: 281.6 bits (719), Expect = 8.1e-72 Identity = 154/363 (42.42%), Postives = 204/363 (56.20%), Query Frame = 0
BLAST of Lcy03g000400 vs. NCBI nr
Match: XP_022154803.1 (uncharacterized protein LOC111021969 [Momordica charantia]) HSP 1 Score: 276.6 bits (706), Expect = 2.6e-70 Identity = 143/362 (39.50%), Postives = 206/362 (56.91%), Query Frame = 0
BLAST of Lcy03g000400 vs. TAIR 10
Match: AT2G27110.1 (FAR1-related sequence 3 ) HSP 1 Score: 46.6 bits (109), Expect = 4.1e-05 Identity = 27/119 (22.69%), Postives = 56/119 (47.06%), Query Frame = 0
BLAST of Lcy03g000400 vs. TAIR 10
Match: AT2G27110.2 (FAR1-related sequence 3 ) HSP 1 Score: 46.6 bits (109), Expect = 4.1e-05 Identity = 27/119 (22.69%), Postives = 56/119 (47.06%), Query Frame = 0
BLAST of Lcy03g000400 vs. TAIR 10
Match: AT2G27110.3 (FAR1-related sequence 3 ) HSP 1 Score: 46.6 bits (109), Expect = 4.1e-05 Identity = 27/119 (22.69%), Postives = 56/119 (47.06%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
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