Lcy03g000400 (gene) Sponge gourd (P93075) v1

Overview
NameLcy03g000400
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionMuDRA-like transposase
LocationChr03: 1204047 .. 1205137 (+)
RNA-Seq ExpressionLcy03g000400
SyntenyLcy03g000400
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGACAAAATATTTGGAGGTTGGTCGTTCTTATAGACCGAAGGACATCATAAGTAATGTGAGGCAAAAGTTCGGTGTGAATCTGAGTTATGACAAGCCATGGAGGGCTAGAGAACATGCCTTGGTTCTTGCCAGAGGCTCGCCTGAAGAGTCCTACAAACAGTTACCACGGTTTGGAGAAGCGTTGAAAATTGAAAATCCTGGTTCATTTTTTTACTTGGAAGTGGACGAGGACCGTTACTTCAAGCATGTGTTCATGGCAATTGGGTCCATGATTAAAGGGTTCTTGAACTCTATTCCTTCGATTTTGGTAGTAGATGAGACCTACATGAGGGGTAAGTTCAGTGGAAAGCTCCTAACTGCAGTAGGCATCGATGGCAATAACCAAATATACCCCGTAGGGTTTGGCATTGGGAGTGGAGAAACTGATGAATCGTGGACCTACTTTTTCCGGCAAATCGAGAGTGTTATTGGTAAACTTCATCCCCTAGTGATTGTATCTGATAGACACAAAAGCATATGCAAGGCAGTATACGGACTGTGTTTCCTAATGCAGCCCACTGCTACTGTATCCACCATTTACAAGAGAACTTGAAAACAAAGTTCAAGGATCACGGCTTTATTCCACTCTACCTTAAAGCAGCGAAGGCATTTCATGATACATAGTTTCAGGAATATTGGATCAAAGTTCCAATACGTGCCCAAAAATACTTGGAAGAAGTCGGACTTGAACATTGGTCGCGTGTTTATCAGTGTGGAATGAGATACAATCAAATGACCACGAACATTGCGGAATCTTTTAACTCCCTCTTGAAAGATGCGAGAGAGTTACCAATAACGGGTCTTCTTGATCACATTAGGGGATGGTTGAAAGCCACTTACTACGACCATCGTCCCGGTGCAGCAAAATGGGATGCACCAATATCAAAATATGGTGAAGAAATTGTTCTAGCAGCGGAGAAGTATGCGAGAAGGCATGTGGTTAGGCCAATTGACCGGTACGAATTCCAAGTCGACGATGGACACTTGGGTGGTCGTATCAACATCCACACGAGGACGTGTACTTGTCGTGAATTCGTCTGCCTCTAA

mRNA sequence

ATGAAGACAAAATATTTGGAGGTTGGTCGTTCTTATAGACCGAAGGACATCATAAGTAATGTGAGGCAAAAGTTCGGTGTGAATCTGAGTTATGACAAGCCATGGAGGGCTAGAGAACATGCCTTGGTTCTTGCCAGAGGCTCGCCTGAAGAGTCCTACAAACAGTTACCACGGTTTGGAGAAGCGTTGAAAATTGAAAATCCTGGTTCATTTTTTTACTTGGAAGTGGACGAGGACCGTTACTTCAAGCATGTGTTCATGGCAATTGGGTCCATGATTAAAGGGTTCTTGAACTCTATTCCTTCGATTTTGGTAGTAGATGAGACCTACATGAGGGGTAAGTTCAGTGGAAAGCTCCTAACTGCAGTAGGCATCGATGGCAATAACCAAATATACCCCGTAGGGTTTGGCATTGGGAGTGGAGAAACTGATGAATCGTGGACCTACTTTTTCCGGCAAATCGAGAGTGTTATTGGTAAACTTCATCCCCTAGTGATTGTATCTGATAGACACAAAAGCATATGCAAGGCAGTATACGGACTGTGTTTCCTAATGCAGCCCACTGCTACTTGTGGAATGAGATACAATCAAATGACCACGAACATTGCGGAATCTTTTAACTCCCTCTTGAAAGATGCGAGAGAGTTACCAATAACGGGTCTTCTTGATCACATTAGGGGATGGTTGAAAGCCACTTACTACGACCATCGTCCCGGTGCAGCAAAATGGGATGCACCAATATCAAAATATGGTGAAGAAATTGTTCTAGCAGCGGAGAAGTATGCGAGAAGGCATGTGGTTAGGCCAATTGACCGGTACGAATTCCAAGTCGACGATGGACACTTGGGTGGTCGTATCAACATCCACACGAGGACGTGTACTTGTCGTGAATTCGTCTGCCTCTAA

Coding sequence (CDS)

ATGAAGACAAAATATTTGGAGGTTGGTCGTTCTTATAGACCGAAGGACATCATAAGTAATGTGAGGCAAAAGTTCGGTGTGAATCTGAGTTATGACAAGCCATGGAGGGCTAGAGAACATGCCTTGGTTCTTGCCAGAGGCTCGCCTGAAGAGTCCTACAAACAGTTACCACGGTTTGGAGAAGCGTTGAAAATTGAAAATCCTGGTTCATTTTTTTACTTGGAAGTGGACGAGGACCGTTACTTCAAGCATGTGTTCATGGCAATTGGGTCCATGATTAAAGGGTTCTTGAACTCTATTCCTTCGATTTTGGTAGTAGATGAGACCTACATGAGGGGTAAGTTCAGTGGAAAGCTCCTAACTGCAGTAGGCATCGATGGCAATAACCAAATATACCCCGTAGGGTTTGGCATTGGGAGTGGAGAAACTGATGAATCGTGGACCTACTTTTTCCGGCAAATCGAGAGTGTTATTGGTAAACTTCATCCCCTAGTGATTGTATCTGATAGACACAAAAGCATATGCAAGGCAGTATACGGACTGTGTTTCCTAATGCAGCCCACTGCTACTTGTGGAATGAGATACAATCAAATGACCACGAACATTGCGGAATCTTTTAACTCCCTCTTGAAAGATGCGAGAGAGTTACCAATAACGGGTCTTCTTGATCACATTAGGGGATGGTTGAAAGCCACTTACTACGACCATCGTCCCGGTGCAGCAAAATGGGATGCACCAATATCAAAATATGGTGAAGAAATTGTTCTAGCAGCGGAGAAGTATGCGAGAAGGCATGTGGTTAGGCCAATTGACCGGTACGAATTCCAAGTCGACGATGGACACTTGGGTGGTCGTATCAACATCCACACGAGGACGTGTACTTGTCGTGAATTCGTCTGCCTCTAA

Protein sequence

MKTKYLEVGRSYRPKDIISNVRQKFGVNLSYDKPWRAREHALVLARGSPEESYKQLPRFGEALKIENPGSFFYLEVDEDRYFKHVFMAIGSMIKGFLNSIPSILVVDETYMRGKFSGKLLTAVGIDGNNQIYPVGFGIGSGETDESWTYFFRQIESVIGKLHPLVIVSDRHKSICKAVYGLCFLMQPTATCGMRYNQMTTNIAESFNSLLKDARELPITGLLDHIRGWLKATYYDHRPGAAKWDAPISKYGEEIVLAAEKYARRHVVRPIDRYEFQVDDGHLGGRINIHTRTCTCREFVCL
Homology
BLAST of Lcy03g000400 vs. ExPASy Swiss-Prot
Match: Q9ZVC9 (Protein FAR1-RELATED SEQUENCE 3 OS=Arabidopsis thaliana OX=3702 GN=FRS3 PE=1 SV=2)

HSP 1 Score: 46.6 bits (109), Expect = 5.8e-04
Identity = 27/119 (22.69%), Postives = 56/119 (47.06%), Query Frame = 0

Query: 56  LPRFGEALKIENPGSFFYLEVDEDRYFKHVFMAIGSMIKGFLNSIPSILVVDETYMRGKF 115
           L  + + ++ ENPG F+ +++DED    +VF A  S  +         + +D  Y   +F
Sbjct: 200 LLEYFKRMQAENPGFFYAVQLDEDNQMSNVFWA-DSRSRVAYTHFGDTVTLDTRYRCNQF 259

Query: 116 SGKLLTAVGIDGNNQIYPVGFGIGSGETDESWTYFFRQIESVIGKLHPLVIVSDRHKSI 175
                   G++ + Q    G  +   E+D S+ + F+   + +    P+ +V+D+ ++I
Sbjct: 260 RVPFAPFTGVNHHGQAILFGCALILDESDTSFIWLFKTFLTAMRDQPPVSLVTDQDRAI 317

BLAST of Lcy03g000400 vs. ExPASy TrEMBL
Match: A0A6J1BRM2 (protein FAR1-RELATED SEQUENCE 4-like OS=Momordica charantia OX=3673 GN=LOC111004779 PE=4 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 4.5e-76
Identity = 149/361 (41.27%), Postives = 216/361 (59.83%), Query Frame = 0

Query: 1   MKTKYLEVGRSYRPKDIISNVRQKFGVNLSYDKPWRAREHALVLARGSPEESYKQLPRFG 60
           +++K+ +V R+YRPKDI+ ++R+++GVN+SYDK WR+ E AL L RG P  SY  LP +G
Sbjct: 165 VQSKFTDVSRTYRPKDIMQDIREEYGVNMSYDKAWRSSEEALRLIRGDPASSYXLLPAYG 224

Query: 61  EALKIENPGSFFYLEVDEDRYFKHVFMAIGSMIKGFLNSIPSILVVDETYMRGKFSGKLL 120
           EA+KI NPG+ F LE+D+ +YFK+VFMA+G  I+GF+  I  +LV+D  +++GK+ G LL
Sbjct: 225 EAMKIMNPGTIFELELDDSKYFKYVFMAMGQSIRGFMCCIRPVLVIDGAHLKGKYGGVLL 284

Query: 121 TAVGIDGNNQIYPVGFGIGSGETDESWTYFFRQIESVIGKLHPLVIVSDRHKSICKAVYG 180
           TA  +D NNQIYPV F +   E+  SW +F  Q++SV+  +  LV +SDRH +ICKA+  
Sbjct: 285 TASAVDANNQIYPVAFAMVGSESVASWVWFMTQLKSVVDTVQNLVFISDRHAAICKAIDE 344

Query: 181 L------CFLM------------------------------------------------- 240
           +      CF +                                                 
Sbjct: 345 VFPTAFHCFCIHHLKMNLLAKFKTSALEALFFKAAKAFRESYFNENWVQLCAHPGVREYL 404

Query: 241 -----QPTATC---GMRYNQMTTNIAESFNSLLKDARELPITGLLDHIRGWLKATYYDHR 299
                +  A C    +RY+QMTTNIAES N+L + AR+L IT LLDHIRG L+  +Y+HR
Sbjct: 405 EAIGKERWARCFQTKLRYSQMTTNIAESVNALFRHARKLSITALLDHIRGVLQRWFYEHR 464

BLAST of Lcy03g000400 vs. ExPASy TrEMBL
Match: A0A6J1CVL4 (uncharacterized protein LOC111015181 OS=Momordica charantia OX=3673 GN=LOC111015181 PE=4 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 3.6e-73
Identity = 150/354 (42.37%), Postives = 201/354 (56.78%), Query Frame = 0

Query: 1   MKTKYLEVGRSYRPKDIISNVRQKFGVNLSYDKPWRAREHALVLARGSPEESYKQLPRFG 60
           ++ K+ +V R+YRPK+II ++R+++GVNLSYD+  R+ E AL L RG P  SY  LP +G
Sbjct: 73  VQEKFTDVSRTYRPKNIIQDMRKEYGVNLSYDRAXRSSEEALRLIRGDPASSYGLLPAYG 132

Query: 61  EALKIENPGSFFYLEVDEDRYFKHVFMAIGSMIKGFLNSIPSILVVDETYMRGKFSGKLL 120
           EALKI NPG+ F LE++  +YFK+VFM +G  I+GFL  I  +LVVD  +++GKF G LL
Sbjct: 133 EALKIMNPGTIFELELEGGKYFKYVFMTLGQSIRGFLGCIRPVLVVDGAHLKGKFRGVLL 192

Query: 121 TAVGIDGNNQIYPVGFGIGSGETDESWTYFFRQIESVIGKLHPLVIVSDRHKSICKAV-- 180
           +A G+D NNQIYPV F I  GET  SW +F  QI+  +  +  LV VSDRH++ICKA+  
Sbjct: 193 SASGVDANNQIYPVAFAIVDGETVXSWVWFMTQIKRALAXVDNLVFVSDRHQTICKAIDK 252

Query: 181 ------------------------------------------------------YGLCFL 240
                                                                 +  CF 
Sbjct: 253 VNLIAKFKNDAKAVXELFLKAAKAYRESYFNSIWAQLRAYPGVREYLDDIGKERWARCFQ 312

Query: 241 MQPTATCGMRYNQMTTNIAESFNSLLKDARELPITGLLDHIRGWLKATYYDHRPGAAKWD 299
            Q      +RY QMTTNIAES N+L + AR+LP+T LLDHIRG L+  +YD R  AA   
Sbjct: 313 TQ------LRYTQMTTNIAESVNTLFRHARKLPVTALLDHIRGKLQNWFYDRRTLAASRS 372

BLAST of Lcy03g000400 vs. ExPASy TrEMBL
Match: A0A6J1DJT1 (uncharacterized protein LOC111020715 OS=Momordica charantia OX=3673 GN=LOC111020715 PE=4 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 3.9e-72
Identity = 154/363 (42.42%), Postives = 204/363 (56.20%), Query Frame = 0

Query: 1   MKTKYLEVGRSYRPKDIISNVRQKFGVNLSYDKPWRAREHALVLARGSPEESYKQLPRFG 60
           ++ K+ +V R+YRPKDII ++R+++GVNLSYDK WR+ E AL L RG P  SY  LP +G
Sbjct: 164 VQAKFTDVSRTYRPKDIIQDMRKEYGVNLSYDKAWRSSEEALRLIRGDPASSYGLLPTYG 223

Query: 61  EALKIENPGSFFYLEVDEDRYFKHVFMAIGSMIKGFLNSIPSILVVDETYMRGKFSGKLL 120
           EALKI NPG+ F LE+   +YFK+VFMA+G  I+GFL  I  +LVVD  +++GKF G LL
Sbjct: 224 EALKIMNPGTIFELELKGGKYFKYVFMALGKSIRGFLACIRPVLVVDGAHLKGKFIGVLL 283

Query: 121 TAVGIDGNNQIYPVGFGIGSGETDESWTYFFRQIESVIGKLHPLVIVSDRHKSICKAVYG 180
            A G D NNQIYPV F I  GET  SW +F  Q++   G ++ LV VS+RH +ICKA+  
Sbjct: 284 IASGADANNQIYPVAFAIVDGETVASWVWFMTQLKGTPGVVNNLVFVSNRHHTICKAIDK 343

Query: 181 L------CFLMQPT---------------------------------------------- 240
           +      CF +Q                                                
Sbjct: 344 VFPTAFHCFCIQHIKMNLLAKFKVDAKALEELFLKAAKAYRESYFNSIWAQLGAYPGVRE 403

Query: 241 ----------ATC---GMRYNQMTTNIAESFNSLLKDARELPITGLLDHIRGWLKATYYD 299
                     A C    +RY QMT+N AES N+L + AR+LP+T LLDHIRG L+  +YD
Sbjct: 404 YLDDIGKERWARCFQTELRYTQMTSNNAESVNALFRHARKLPVTALLDHIRGLLQTWFYD 463

BLAST of Lcy03g000400 vs. ExPASy TrEMBL
Match: A0A6J1DLB0 (uncharacterized protein LOC111021969 OS=Momordica charantia OX=3673 GN=LOC111021969 PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 1.3e-70
Identity = 143/362 (39.50%), Postives = 206/362 (56.91%), Query Frame = 0

Query: 1   MKTKYLEVGRSYRPKDIISNVRQKFGVNLSYDKPWRAREHALVLARGSPEESYKQLPRFG 60
           +KT   ++ R YRP+DII+++R+ +GVN  Y+K WRARE AL L  GSP+ESY  L ++G
Sbjct: 370 IKTNLEDISRRYRPRDIITDMRRNYGVNTRYEKTWRAREVALSLLMGSPKESYTTLHKYG 429

Query: 61  EALKIENPGSFFYLEVDEDRYFKHVFMAIGSMIKGFLNSIPSILVVDETYMRGKFSGKLL 120
            ALK  N G+ F +++++D YFK+ FMA+G  I+GF + I  +LVVD  +++GK+ G LL
Sbjct: 430 AALKAANVGTVFQIKLEDDTYFKYAFMALGCSIRGFGSCIRQVLVVDGAHLKGKYRGVLL 489

Query: 121 TAVGIDGNNQIYPVGFGIGSGETDESWTYFFRQIESVIGKLHPLVIVSDRHKSICKAVYG 180
           TA  +DGNNQIYP+ FG+   E+DESWT+F  +++  IG +  LV VSDRH++I  +V  
Sbjct: 490 TASSVDGNNQIYPLAFGVVDKESDESWTWFLERVKICIGNVDGLVFVSDRHQTITNSV-A 549

Query: 181 LCFLMQPTATC------------------------------------------------- 240
             FL     TC                                                 
Sbjct: 550 TMFLDAAHVTCMHHVAMKLTEKFRNGGMRRIFYKAAKAFKVSKFRYYWGQLAGFPGVHKY 609

Query: 241 ---------------GMRYNQMTTNIAESFNSLLKDARELPITGLLDHIRGWLKATYYDH 299
                          GMRYNQMT+N+AES N++L  AR+LPIT L ++ R  L+  +YD 
Sbjct: 610 LEDIGLDKWARTYQPGMRYNQMTSNLAESMNAVLVHARDLPITALFENCRSLLQQWFYDR 669

BLAST of Lcy03g000400 vs. ExPASy TrEMBL
Match: A0A6J1D278 (uncharacterized protein LOC111016623 OS=Momordica charantia OX=3673 GN=LOC111016623 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 8.2e-70
Identity = 139/361 (38.50%), Postives = 212/361 (58.73%), Query Frame = 0

Query: 1   MKTKYLEVGRSYRPKDIISNVRQKFGVNLSYDKPWRAREHALVLARGSPEESYKQLPRFG 60
           +KT + +    YRPKDI++++R+ + +N+ Y+K WRA+E AL L  GSP++SY  L ++G
Sbjct: 17  IKTNFEDPNCRYRPKDIVNDMRKNYDINIQYEKAWRAKEVALDLLMGSPKKSYTLLRKYG 76

Query: 61  EALKIENPGSFFYLEVDEDRYFKHVFMAIGSMIKGFLNSIPSILVVDETYMRGKFSGKLL 120
           EALK  NPG+ F L++++D+YF++ FMA+G  I+GF + I S+LV+D  +++GK+ G +L
Sbjct: 77  EALKFVNPGTIFNLKLEDDKYFQYAFMALGCSIRGFRSCIRSVLVIDGAHLKGKYKGVIL 136

Query: 121 TAVGIDGNNQIYPVGFGIGSGETDESWTYFFRQIESVIGKLHPLVIVSDRHKSICKAV-- 180
            A  +DGNNQIYPV FGI   E+D SWT+F  Q++S IG++  LV VSDRH++I  +V  
Sbjct: 137 IASSVDGNNQIYPVAFGIVDKESDNSWTWFLDQVKSAIGEVDGLVFVSDRHQAINNSVAN 196

Query: 181 ------------------------YGLCFLMQPTATC----------------------- 240
                                    G+  L    A                         
Sbjct: 197 VFPNAEHVSCMHHIKMNLNDKFKNEGMQMLYLQAAQAFKKSTFRYYWNQLAGFPEVQRYL 256

Query: 241 --------------GMRYNQMTTNIAESFNSLLKDARELPITGLLDHIRGWLKATYYDHR 299
                          +RYNQMTTNIAES N++L  AR LP+T LL++ R  L+  +Y+ R
Sbjct: 257 QEVGFDKWSRAYQPELRYNQMTTNIAESMNAVLVHARALPVTALLENCRVLLQRWFYERR 316

BLAST of Lcy03g000400 vs. NCBI nr
Match: XP_022131652.1 (protein FAR1-RELATED SEQUENCE 4-like [Momordica charantia])

HSP 1 Score: 294.7 bits (753), Expect = 9.3e-76
Identity = 149/361 (41.27%), Postives = 216/361 (59.83%), Query Frame = 0

Query: 1   MKTKYLEVGRSYRPKDIISNVRQKFGVNLSYDKPWRAREHALVLARGSPEESYKQLPRFG 60
           +++K+ +V R+YRPKDI+ ++R+++GVN+SYDK WR+ E AL L RG P  SY  LP +G
Sbjct: 165 VQSKFTDVSRTYRPKDIMQDIREEYGVNMSYDKAWRSSEEALRLIRGDPASSYXLLPAYG 224

Query: 61  EALKIENPGSFFYLEVDEDRYFKHVFMAIGSMIKGFLNSIPSILVVDETYMRGKFSGKLL 120
           EA+KI NPG+ F LE+D+ +YFK+VFMA+G  I+GF+  I  +LV+D  +++GK+ G LL
Sbjct: 225 EAMKIMNPGTIFELELDDSKYFKYVFMAMGQSIRGFMCCIRPVLVIDGAHLKGKYGGVLL 284

Query: 121 TAVGIDGNNQIYPVGFGIGSGETDESWTYFFRQIESVIGKLHPLVIVSDRHKSICKAVYG 180
           TA  +D NNQIYPV F +   E+  SW +F  Q++SV+  +  LV +SDRH +ICKA+  
Sbjct: 285 TASAVDANNQIYPVAFAMVGSESVASWVWFMTQLKSVVDTVQNLVFISDRHAAICKAIDE 344

Query: 181 L------CFLM------------------------------------------------- 240
           +      CF +                                                 
Sbjct: 345 VFPTAFHCFCIHHLKMNLLAKFKTSALEALFFKAAKAFRESYFNENWVQLCAHPGVREYL 404

Query: 241 -----QPTATC---GMRYNQMTTNIAESFNSLLKDARELPITGLLDHIRGWLKATYYDHR 299
                +  A C    +RY+QMTTNIAES N+L + AR+L IT LLDHIRG L+  +Y+HR
Sbjct: 405 EAIGKERWARCFQTKLRYSQMTTNIAESVNALFRHARKLSITALLDHIRGVLQRWFYEHR 464

BLAST of Lcy03g000400 vs. NCBI nr
Match: XP_038887209.1 (uncharacterized protein LOC120077397 [Benincasa hispida])

HSP 1 Score: 285.4 bits (729), Expect = 5.6e-73
Identity = 153/330 (46.36%), Postives = 206/330 (62.42%), Query Frame = 0

Query: 1   MKTKYLEVGRSYRPKDIISNVRQKFGVNLSYDKPWRAREHALVLARGSPEESYKQLPRFG 60
           + +K+ +V  SYRPKDI+ +++Q++ V+LSYDK WRARE  LVL  GS EESYK+LP+FG
Sbjct: 240 ISSKFEDVSHSYRPKDIVKDIKQEYSVSLSYDKAWRAREEVLVLVWGSLEESYKKLPKFG 299

Query: 61  EALKIENPGSFFYLEVDEDRYFKHVFMAIGSMIKGFLNSIPSILVVDETYMRGKFSGKLL 120
           EAL+IENPGS F  ++ ED+YFK+VFMA+G+ I+ FLN I  +L+VD T +R K+SGKLL
Sbjct: 300 EALQIENPGSAFKYDLQEDKYFKYVFMALGASIRVFLNCIQPVLIVDGTRLRDKYSGKLL 359

Query: 121 TAVGIDGNNQIYPVGFGIGSGETDESWTYFFRQIESVIGKLHPLVIVSDRHKSICKAVYG 180
            A+ +D NNQIY V FGI   ETDESW +F +Q+  VIG+++ LVIVSDRH SI K +  
Sbjct: 360 LAIEVDENNQIYSVAFGIFGRETDESWVWFLQQLRCVIGQVYNLVIVSDRHPSIKKEI-- 419

Query: 181 LCFLMQPTATCGMRYNQMTTNI------AESFNSLLKDARE------------------- 240
               + P A  G+  + +  N+       + F+   K  RE                   
Sbjct: 420 --ITVFPKAFNGICIHHLKANLLVNFKNKDIFDKAAKANRESVFKYHWSQFAGYPGAHKY 479

Query: 241 LPITGL-------LDHIRGWLKATYYDHRPGAAKWDAPISKYGEEIVLAAEKYARRHVVR 299
           L   GL         HIRGWL+  Y+  R  A+   + +S Y   I+  A   A R+ VR
Sbjct: 480 LEDIGLERGARMYQYHIRGWLQDLYHRRRMEASNNTSRLSNYAMTIIRDAADKASRYEVR 539

BLAST of Lcy03g000400 vs. NCBI nr
Match: XP_022145820.1 (uncharacterized protein LOC111015181 [Momordica charantia])

HSP 1 Score: 285.0 bits (728), Expect = 7.4e-73
Identity = 150/354 (42.37%), Postives = 201/354 (56.78%), Query Frame = 0

Query: 1   MKTKYLEVGRSYRPKDIISNVRQKFGVNLSYDKPWRAREHALVLARGSPEESYKQLPRFG 60
           ++ K+ +V R+YRPK+II ++R+++GVNLSYD+  R+ E AL L RG P  SY  LP +G
Sbjct: 73  VQEKFTDVSRTYRPKNIIQDMRKEYGVNLSYDRAXRSSEEALRLIRGDPASSYGLLPAYG 132

Query: 61  EALKIENPGSFFYLEVDEDRYFKHVFMAIGSMIKGFLNSIPSILVVDETYMRGKFSGKLL 120
           EALKI NPG+ F LE++  +YFK+VFM +G  I+GFL  I  +LVVD  +++GKF G LL
Sbjct: 133 EALKIMNPGTIFELELEGGKYFKYVFMTLGQSIRGFLGCIRPVLVVDGAHLKGKFRGVLL 192

Query: 121 TAVGIDGNNQIYPVGFGIGSGETDESWTYFFRQIESVIGKLHPLVIVSDRHKSICKAV-- 180
           +A G+D NNQIYPV F I  GET  SW +F  QI+  +  +  LV VSDRH++ICKA+  
Sbjct: 193 SASGVDANNQIYPVAFAIVDGETVXSWVWFMTQIKRALAXVDNLVFVSDRHQTICKAIDK 252

Query: 181 ------------------------------------------------------YGLCFL 240
                                                                 +  CF 
Sbjct: 253 VNLIAKFKNDAKAVXELFLKAAKAYRESYFNSIWAQLRAYPGVREYLDDIGKERWARCFQ 312

Query: 241 MQPTATCGMRYNQMTTNIAESFNSLLKDARELPITGLLDHIRGWLKATYYDHRPGAAKWD 299
            Q      +RY QMTTNIAES N+L + AR+LP+T LLDHIRG L+  +YD R  AA   
Sbjct: 313 TQ------LRYTQMTTNIAESVNTLFRHARKLPVTALLDHIRGKLQNWFYDRRTLAASRS 372

BLAST of Lcy03g000400 vs. NCBI nr
Match: XP_022153146.1 (uncharacterized protein LOC111020715 [Momordica charantia])

HSP 1 Score: 281.6 bits (719), Expect = 8.1e-72
Identity = 154/363 (42.42%), Postives = 204/363 (56.20%), Query Frame = 0

Query: 1   MKTKYLEVGRSYRPKDIISNVRQKFGVNLSYDKPWRAREHALVLARGSPEESYKQLPRFG 60
           ++ K+ +V R+YRPKDII ++R+++GVNLSYDK WR+ E AL L RG P  SY  LP +G
Sbjct: 164 VQAKFTDVSRTYRPKDIIQDMRKEYGVNLSYDKAWRSSEEALRLIRGDPASSYGLLPTYG 223

Query: 61  EALKIENPGSFFYLEVDEDRYFKHVFMAIGSMIKGFLNSIPSILVVDETYMRGKFSGKLL 120
           EALKI NPG+ F LE+   +YFK+VFMA+G  I+GFL  I  +LVVD  +++GKF G LL
Sbjct: 224 EALKIMNPGTIFELELKGGKYFKYVFMALGKSIRGFLACIRPVLVVDGAHLKGKFIGVLL 283

Query: 121 TAVGIDGNNQIYPVGFGIGSGETDESWTYFFRQIESVIGKLHPLVIVSDRHKSICKAVYG 180
            A G D NNQIYPV F I  GET  SW +F  Q++   G ++ LV VS+RH +ICKA+  
Sbjct: 284 IASGADANNQIYPVAFAIVDGETVASWVWFMTQLKGTPGVVNNLVFVSNRHHTICKAIDK 343

Query: 181 L------CFLMQPT---------------------------------------------- 240
           +      CF +Q                                                
Sbjct: 344 VFPTAFHCFCIQHIKMNLLAKFKVDAKALEELFLKAAKAYRESYFNSIWAQLGAYPGVRE 403

Query: 241 ----------ATC---GMRYNQMTTNIAESFNSLLKDARELPITGLLDHIRGWLKATYYD 299
                     A C    +RY QMT+N AES N+L + AR+LP+T LLDHIRG L+  +YD
Sbjct: 404 YLDDIGKERWARCFQTELRYTQMTSNNAESVNALFRHARKLPVTALLDHIRGLLQTWFYD 463

BLAST of Lcy03g000400 vs. NCBI nr
Match: XP_022154803.1 (uncharacterized protein LOC111021969 [Momordica charantia])

HSP 1 Score: 276.6 bits (706), Expect = 2.6e-70
Identity = 143/362 (39.50%), Postives = 206/362 (56.91%), Query Frame = 0

Query: 1   MKTKYLEVGRSYRPKDIISNVRQKFGVNLSYDKPWRAREHALVLARGSPEESYKQLPRFG 60
           +KT   ++ R YRP+DII+++R+ +GVN  Y+K WRARE AL L  GSP+ESY  L ++G
Sbjct: 370 IKTNLEDISRRYRPRDIITDMRRNYGVNTRYEKTWRAREVALSLLMGSPKESYTTLHKYG 429

Query: 61  EALKIENPGSFFYLEVDEDRYFKHVFMAIGSMIKGFLNSIPSILVVDETYMRGKFSGKLL 120
            ALK  N G+ F +++++D YFK+ FMA+G  I+GF + I  +LVVD  +++GK+ G LL
Sbjct: 430 AALKAANVGTVFQIKLEDDTYFKYAFMALGCSIRGFGSCIRQVLVVDGAHLKGKYRGVLL 489

Query: 121 TAVGIDGNNQIYPVGFGIGSGETDESWTYFFRQIESVIGKLHPLVIVSDRHKSICKAVYG 180
           TA  +DGNNQIYP+ FG+   E+DESWT+F  +++  IG +  LV VSDRH++I  +V  
Sbjct: 490 TASSVDGNNQIYPLAFGVVDKESDESWTWFLERVKICIGNVDGLVFVSDRHQTITNSV-A 549

Query: 181 LCFLMQPTATC------------------------------------------------- 240
             FL     TC                                                 
Sbjct: 550 TMFLDAAHVTCMHHVAMKLTEKFRNGGMRRIFYKAAKAFKVSKFRYYWGQLAGFPGVHKY 609

Query: 241 ---------------GMRYNQMTTNIAESFNSLLKDARELPITGLLDHIRGWLKATYYDH 299
                          GMRYNQMT+N+AES N++L  AR+LPIT L ++ R  L+  +YD 
Sbjct: 610 LEDIGLDKWARTYQPGMRYNQMTSNLAESMNAVLVHARDLPITALFENCRSLLQQWFYDR 669

BLAST of Lcy03g000400 vs. TAIR 10
Match: AT2G27110.1 (FAR1-related sequence 3 )

HSP 1 Score: 46.6 bits (109), Expect = 4.1e-05
Identity = 27/119 (22.69%), Postives = 56/119 (47.06%), Query Frame = 0

Query: 56  LPRFGEALKIENPGSFFYLEVDEDRYFKHVFMAIGSMIKGFLNSIPSILVVDETYMRGKF 115
           L  + + ++ ENPG F+ +++DED    +VF A  S  +         + +D  Y   +F
Sbjct: 200 LLEYFKRMQAENPGFFYAVQLDEDNQMSNVFWA-DSRSRVAYTHFGDTVTLDTRYRCNQF 259

Query: 116 SGKLLTAVGIDGNNQIYPVGFGIGSGETDESWTYFFRQIESVIGKLHPLVIVSDRHKSI 175
                   G++ + Q    G  +   E+D S+ + F+   + +    P+ +V+D+ ++I
Sbjct: 260 RVPFAPFTGVNHHGQAILFGCALILDESDTSFIWLFKTFLTAMRDQPPVSLVTDQDRAI 317

BLAST of Lcy03g000400 vs. TAIR 10
Match: AT2G27110.2 (FAR1-related sequence 3 )

HSP 1 Score: 46.6 bits (109), Expect = 4.1e-05
Identity = 27/119 (22.69%), Postives = 56/119 (47.06%), Query Frame = 0

Query: 56  LPRFGEALKIENPGSFFYLEVDEDRYFKHVFMAIGSMIKGFLNSIPSILVVDETYMRGKF 115
           L  + + ++ ENPG F+ +++DED    +VF A  S  +         + +D  Y   +F
Sbjct: 200 LLEYFKRMQAENPGFFYAVQLDEDNQMSNVFWA-DSRSRVAYTHFGDTVTLDTRYRCNQF 259

Query: 116 SGKLLTAVGIDGNNQIYPVGFGIGSGETDESWTYFFRQIESVIGKLHPLVIVSDRHKSI 175
                   G++ + Q    G  +   E+D S+ + F+   + +    P+ +V+D+ ++I
Sbjct: 260 RVPFAPFTGVNHHGQAILFGCALILDESDTSFIWLFKTFLTAMRDQPPVSLVTDQDRAI 317

BLAST of Lcy03g000400 vs. TAIR 10
Match: AT2G27110.3 (FAR1-related sequence 3 )

HSP 1 Score: 46.6 bits (109), Expect = 4.1e-05
Identity = 27/119 (22.69%), Postives = 56/119 (47.06%), Query Frame = 0

Query: 56  LPRFGEALKIENPGSFFYLEVDEDRYFKHVFMAIGSMIKGFLNSIPSILVVDETYMRGKF 115
           L  + + ++ ENPG F+ +++DED    +VF A  S  +         + +D  Y   +F
Sbjct: 55  LLEYFKRMQAENPGFFYAVQLDEDNQMSNVFWA-DSRSRVAYTHFGDTVTLDTRYRCNQF 114

Query: 116 SGKLLTAVGIDGNNQIYPVGFGIGSGETDESWTYFFRQIESVIGKLHPLVIVSDRHKSI 175
                   G++ + Q    G  +   E+D S+ + F+   + +    P+ +V+D+ ++I
Sbjct: 115 RVPFAPFTGVNHHGQAILFGCALILDESDTSFIWLFKTFLTAMRDQPPVSLVTDQDRAI 172

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9ZVC95.8e-0422.69Protein FAR1-RELATED SEQUENCE 3 OS=Arabidopsis thaliana OX=3702 GN=FRS3 PE=1 SV=... [more]
Match NameE-valueIdentityDescription
A0A6J1BRM24.5e-7641.27protein FAR1-RELATED SEQUENCE 4-like OS=Momordica charantia OX=3673 GN=LOC111004... [more]
A0A6J1CVL43.6e-7342.37uncharacterized protein LOC111015181 OS=Momordica charantia OX=3673 GN=LOC111015... [more]
A0A6J1DJT13.9e-7242.42uncharacterized protein LOC111020715 OS=Momordica charantia OX=3673 GN=LOC111020... [more]
A0A6J1DLB01.3e-7039.50uncharacterized protein LOC111021969 OS=Momordica charantia OX=3673 GN=LOC111021... [more]
A0A6J1D2788.2e-7038.50uncharacterized protein LOC111016623 OS=Momordica charantia OX=3673 GN=LOC111016... [more]
Match NameE-valueIdentityDescription
XP_022131652.19.3e-7641.27protein FAR1-RELATED SEQUENCE 4-like [Momordica charantia][more]
XP_038887209.15.6e-7346.36uncharacterized protein LOC120077397 [Benincasa hispida][more]
XP_022145820.17.4e-7342.37uncharacterized protein LOC111015181 [Momordica charantia][more]
XP_022153146.18.1e-7242.42uncharacterized protein LOC111020715 [Momordica charantia][more]
XP_022154803.12.6e-7039.50uncharacterized protein LOC111021969 [Momordica charantia][more]
Match NameE-valueIdentityDescription
AT2G27110.14.1e-0522.69FAR1-related sequence 3 [more]
AT2G27110.24.1e-0522.69FAR1-related sequence 3 [more]
AT2G27110.34.1e-0522.69FAR1-related sequence 3 [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018289MULE transposase domainPFAMPF10551MULEcoord: 103..182
e-value: 1.9E-15
score: 57.1
NoneNo IPR availablePANTHERPTHR31973POLYPROTEIN, PUTATIVE-RELATEDcoord: 191..298
coord: 8..178
NoneNo IPR availablePANTHERPTHR31973:SF106OS09G0268600 PROTEINcoord: 191..298
coord: 8..178

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy03g000400.1Lcy03g000400.1mRNA