Lcy02g018860 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy02g018860
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	DAR GTPase 3, chloroplastic
Location	Chr02: 45997188 .. 46000599 (+)
RNA-Seq Expression	Lcy02g018860
Synteny	Lcy02g018860

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTGTTCATATTCAGTTCTCAGGGCTCTGCCTGCCCACCCCTCGTGCCATCCGGCCGCACCTTTTCTACTGTCGTAGCGTACCATCCCCAGCATCTCTCACGCCTTCAGCTTCTGTTTCTTTGCCGCAGCCCACAATTCAGGTATGCCGCATTCAAATCGCAAAATGGGCTTCCTAGTTTTCATTTCACGAAGGAAAGCACTTGAGTGGAAAATTTATCTTTACAATTGAATTGAGGAGCTTAATTCTAGCATTGTAGTTTCAATATTCTATACCACTCACTACTTCCACAATTCGTTCTTGTTTTCATATGAGCTGTATTATTATCGTTCCTTTCTTTATGGGGAAAAAAACTTCTTGTCTTTTGGAGCTACCTACTAGACGTTCACAATTATTTCTATTAGCTTTTTGTTGAACTTATCTTAAGTAGTAATTGGATAAAGACATAAAGTTGGGAAATTGTGATATAAATGTTTCAGATTGTTGGTGGTAAAACATCTAATAGCGGGCTGGATGAGAGAAATTGGGTTGATTTTGAAGGTGATCTGTATTACTGGACAAAGGCATTGCGTCCCGTTCAGGTTTGGCAAAATAGTGCACCAAGTTTTCTTGATGAATAAATCTTTCAAGCTAAAGAATATATCCTTTCTTTTGCATTTTGTGCTGGCAACTCCGCAGTGGTATCCTGGCCATATAGCAAAAACAGAAAAAGAGCTGAAGAATCAACTAAAGTTGATGGATGTTGTGATAGAGGTTCGAGATGCTAGAATACCCTTGTCTACAAGTCACCCACAGGTTTTGCATCCAAGTTCTTATTTTGTTCATTCCATCATCCATTAGATTATCAACTCTCAAATTTTTTTTGTTTTATGTATTTATTTTATTAAAATGTTTAGGAGATTTGACTTGAATGATTCCAGTTCTTAATTGGATTAGTAGACATCCATAACTATTGATACCCCTAATATAGTGTCACAAAAGTGAATGAATGTTCGGAGGCTGTAATTCTTTTGGCTAAAATACAGACTGTTAGAGTTGCTTTTACTAAAGGATGAAGTGATTTTTTATTTCATAACTAAAAAACTATCTGACCATGATTTTTTCTTTTATTTACAATTTAATCACCATTTTCATGAATAGATGGATGCATGGCTTGGTAATCGGAGAAGAATATTGGTGTTGAATAGAGAAGATATGATATCATCAGAAGACCGGAATGCTTGGGCAGCTTATTTTACGAGACAGGGAATAAAAGTAGTATTTTCGAATGGGCAACTTGGAATGGTATCTAAAGAAGTGATATTCTTTCTGATTGTCTTGACTTTGACATAGTAATAGTCGATAATGTTCTCATGTGGCAACTGTAGGGGACAATGAAGCTAGGGCGGTTGGCAAAAACATTAGCAGAAGATGTAAATGTCAGACGTAGAGCAAAAGGACTACTTCCTCGCGCGGTTTGTTGCATGAAATGACTAAATAGTAAATTCTAATGATTAAGTTTGTTTTTTAAGGTTTTTATATATCTAGAATTCTTTCTATGCCAAGTGTATATCTTCACATCATAAATTATTTTCATTCTATTCTGACATAAACAGATATACAGAAGCACCACAAATACATTTGGCCTTAAGCCTGAGTGAAGCATATTATTAACTTGAAGAAAACTATTTGGATAACTGCTATTTGATATTTTTCTGTGCAATAGCAATAGCCAAGATACGAAGATTATGGGGGCTATATTGGGTTTATCCTTAATAGTAAATCAGAAATATTTTCAGAACATACCCTAACCGACCTTAGTGATTATTCTATAGGTTCGTGCTGGAATAGTTGGGTATCCTAATGTTGGGAAATCATCTCTGATCAACCGCTTGCTGAAACGACGAATGTGTCCAGCAGCTCCAAGACCAGGTGTTACCAGAGAATTGAAGTATGATTCCTTTTTTTGCATCTTAATATTATTGACTAAGATGTAAAAACTGGGAACGAGGGAGGGGAATCCTTTGTAAATCCATTTCCATTGCATTTCTGGGAGATTGCATTGAATTCTCTTCTAAGTAGAGTTCGATAAACTCTTTCAATATCCCTCTCCTGATTTCCATTTTCTTGTAAAAGGTGGGTTCGTTTTGGCAAAGATCTTGAGTTGCTTGATTCTCCTGGTATTATACCAATGCGGATTAGTGACCAGACGGCTGCAATAAAGCTTGCTATATGCGATGACATTGGAGAAAGGTCCTACAATGCTGCCGATGTTGCTGCCATCCTTGTACAGATTCTGACCAAGCTTCCATCAGTAGGTACTGTGGAAATATTTTGATCTCTTGAAAATTTCAAGAATACAAGTTCTCTTTTGGTGGGACAGAAAGATTTCCTCAGTTACGTGATAGTCGATCATTTATATTCACTGAGTTGATTGCTTGTTGAAAAACTGCAACGCCTAAACTGTAGCATATATTTACTTGCATGTTTCATGATGTTCACTTTCACCTGCTAAAACAGTCTGTTTCCTAATTGTTGATAAAGTGACAATTTTTTTTTTGCAAATCTCCAGGTGTAGAATCACTTCAAAAGCGGTACAAAGTTGATGCAGATGGTCAATGTGGTCACACGTATGTTATTATATGCTGATCAATAGTTTAATTTCTAGTTTAGTATTGTGTGCGTGAAGCATCCTGATTTCTTGATGAGAAAAGCTCTACCTTTCTTTACTCTCCTCCCACCTTGTATAACCTTGGGTTGACTATGAATTCTTTCTTTTACCCCGAGGGACAGAATCTTTGACTCAAGAATCTTTCTATGTTTAAAAAGAAAAGGAACTTATTTGCAGTCCAAAAATAATTTCTAGTAAATTGCTGGTGACAGATTTGTTCAAAAGCTAGCAGTTCAATTGTTCAATGGGGACAGTCATCAAGCAGCTTTCCGCATCTTATCAGATTTTCGCAAAGGAAAGTTTGGTTGGGTCGCTTTGGAGAGACCTCCCAGATAGTGTTGTTGGATGATGGTAGAATTTCAACTTCTCACTTTATACAATTCGTACAAATGCTAAAGGCCACTTAGTGTGGTATTAGAAACTCTCAACAGATAAAAAGCCTCACGATGTCTGTATCTCTAACTTCTGGAGTTGTGGAAAGCACAAAATTGGAGTCCTTGATCAAGAACGGCCAGGAGTCTCTCATTAATTTGTGAAGCCTTTGTTAACATGTAATATATGTTTTTATATTGCTCGTGTAATTACAACTCTCATTTTGGTTAACTTGCATAAGATTTATCGTACTTTATCATAAATGTCTTTATCAACTGGTTTGAAGTTGTACATTATTTAGGCGTTTCGAGTTCCATGTCAGAATATATTGTAAAAAAAAAAAACATCTTCAAAAAGGAAAATTTTAAATTACTACTTAGGATCGCAA

mRNA sequence

ATGAGTGTTCATATTCAGTTCTCAGGGCTCTGCCTGCCCACCCCTCGTGCCATCCGGCCGCACCTTTTCTACTGTCGTAGCGTACCATCCCCAGCATCTCTCACGCCTTCAGCTTCTGTTTCTTTGCCGCAGCCCACAATTCAGATTGTTGGTGGTAAAACATCTAATAGCGGGCTGGATGAGAGAAATTGGGTTGATTTTGAAGGTGATCTGTATTACTGGACAAAGGCATTGCGTCCCGTTCAGTGGTATCCTGGCCATATAGCAAAAACAGAAAAAGAGCTGAAGAATCAACTAAAGTTGATGGATGTTGTGATAGAGATGGATGCATGGCTTGGTAATCGGAGAAGAATATTGGTGTTGAATAGAGAAGATATGATATCATCAGAAGACCGGAATGCTTGGGCAGCTTATTTTACGAGACAGGGAATAAAAGTAGTATTTTCGAATGGGCAACTTGGAATGGGGACAATGAAGCTAGGGCGGTTGGCAAAAACATTAGCAGAAGATGTAAATGTCAGACGTAGAGCAAAAGGACTACTTCCTCGCGCGGTTCGTGCTGGAATAGTTGGGTATCCTAATGTTGGGAAATCATCTCTGATCAACCGCTTGCTGAAACGACGAATGTGTCCAGCAGCTCCAAGACCAGGTGTTACCAGAGAATTGAAGTGGGTTCGTTTTGGCAAAGATCTTGAGTTGCTTGATTCTCCTGGTATTATACCAATGCGGATTAGTGACCAGACGGCTGCAATAAAGCTTGCTATATGCGATGACATTGGAGAAAGGTCCTACAATGCTGCCGATGTTGCTGCCATCCTTGTACAGATTCTGACCAAGCTTCCATCAGTAGGTACTGTGGAAATATTTTGATCTCTTGAAAATTTCAAGAATACAAGTTCTCTTTTGGTGGGACAGAAAGATTTCCTCAGTTACGTGATAGTCGATCATTTATATTCACTGAGTTGATTGCTTGTTGAAAAACTGCAACGCCTAAACTGTAGCATATATTTACTTGCATGTTTCATGATGTTCACTTTCACCTGCTAAAACAGTCTGTTTCCTAATTGTTGATAAAGTGACAATTTTTTTTTTGCAAATCTCCAGGTGTAGAATCACTTCAAAAGCGGTACAAAGTTGATGCAGATGGTCAATGTGGTCACACATTTGTTCAAAAGCTAGCAGTTCAATTGTTCAATGGGGACAGTCATCAAGCAGCTTTCCGCATCTTATCAGATTTTCGCAAAGGAAAGTTTGGTTGGGTCGCTTTGGAGAGACCTCCCAGATAGTGTTGTTGGATGATGGTAGAATTTCAACTTCTCACTTTATACAATTCGTACAAATGCTAAAGGCCACTTAGTGTGGTATTAGAAACTCTCAACAGATAAAAAGCCTCACGATGTCTGTATCTCTAACTTCTGGAGTTGTGGAAAGCACAAAATTGGAGTCCTTGATCAAGAACGGCCAGGAGTCTCTCATTAATTTGTGAAGCCTTTGTTAACATGTAATATATGTTTTTATATTGCTCGTGTAATTACAACTCTCATTTTGGTTAACTTGCATAAGATTTATCGTACTTTATCATAAATGTCTTTATCAACTGGTTTGAAGTTGTACATTATTTAGGCGTTTCGAGTTCCATGTCAGAATATATTGTAAAAAAAAAAAACATCTTCAAAAAGGAAAATTTTAAATTACTACTTAGGATCGCAA

Coding sequence (CDS)

ATGAGTGTTCATATTCAGTTCTCAGGGCTCTGCCTGCCCACCCCTCGTGCCATCCGGCCGCACCTTTTCTACTGTCGTAGCGTACCATCCCCAGCATCTCTCACGCCTTCAGCTTCTGTTTCTTTGCCGCAGCCCACAATTCAGATTGTTGGTGGTAAAACATCTAATAGCGGGCTGGATGAGAGAAATTGGGTTGATTTTGAAGGTGATCTGTATTACTGGACAAAGGCATTGCGTCCCGTTCAGTGGTATCCTGGCCATATAGCAAAAACAGAAAAAGAGCTGAAGAATCAACTAAAGTTGATGGATGTTGTGATAGAGATGGATGCATGGCTTGGTAATCGGAGAAGAATATTGGTGTTGAATAGAGAAGATATGATATCATCAGAAGACCGGAATGCTTGGGCAGCTTATTTTACGAGACAGGGAATAAAAGTAGTATTTTCGAATGGGCAACTTGGAATGGGGACAATGAAGCTAGGGCGGTTGGCAAAAACATTAGCAGAAGATGTAAATGTCAGACGTAGAGCAAAAGGACTACTTCCTCGCGCGGTTCGTGCTGGAATAGTTGGGTATCCTAATGTTGGGAAATCATCTCTGATCAACCGCTTGCTGAAACGACGAATGTGTCCAGCAGCTCCAAGACCAGGTGTTACCAGAGAATTGAAGTGGGTTCGTTTTGGCAAAGATCTTGAGTTGCTTGATTCTCCTGGTATTATACCAATGCGGATTAGTGACCAGACGGCTGCAATAAAGCTTGCTATATGCGATGACATTGGAGAAAGGTCCTACAATGCTGCCGATGTTGCTGCCATCCTTGTACAGATTCTGACCAAGCTTCCATCAGTAGGTACTGTGGAAATATTTTGA

Protein sequence

MSVHIQFSGLCLPTPRAIRPHLFYCRSVPSPASLTPSASVSLPQPTIQIVGGKTSNSGLDERNWVDFEGDLYYWTKALRPVQWYPGHIAKTEKELKNQLKLMDVVIEMDAWLGNRRRILVLNREDMISSEDRNAWAAYFTRQGIKVVFSNGQLGMGTMKLGRLAKTLAEDVNVRRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRELKWVRFGKDLELLDSPGIIPMRISDQTAAIKLAICDDIGERSYNAADVAAILVQILTKLPSVGTVEIF

Homology

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BLAST of Lcy02g018860 vs. ExPASy Swiss-Prot
Match: Q8H1F6 (DAR GTPase 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DGP3 PE=2 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 1.4e-100
Identity = 185/283 (65.37%), Postives = 220/283 (77.74%), Query Frame = 0


Query: 36  PSASVSLPQPTIQIVGGKTSN---------------SGLDERNWVDFEGDLYYWTKALRP 95
           P+A+ S P P IQIVGGK  N               +  DE +W++ E D+  WT+ALRP
Sbjct: 37  PTANSSRP-PPIQIVGGKDLNLDVTRKDDSIGFKLEANEDEIDWMNLESDIRLWTRALRP 96

Query: 96  VQWYPGHIAKTEKELKNQLKLMDVVIE--------------MDAWLGNRRRILVLNREDM 155
           VQWYPGHI KTEKEL+ QLKLMDVVIE              MDAWLGNR+RILVLNREDM
Sbjct: 97  VQWYPGHIMKTEKELREQLKLMDVVIEVRDARIPLSTTHPKMDAWLGNRKRILVLNREDM 156

Query: 156 ISSEDRNAWAAYFTRQGIKVVFSNGQLGMGTMKLGRLAKTLAEDVNVRRRAKGLLPRAVR 215
           IS++DRN WA YF +QGIKV+F+NG+LGMG MKLGRLAK+LA DVN +RR KGLLPR+VR
Sbjct: 157 ISNDDRNDWARYFAKQGIKVIFTNGKLGMGAMKLGRLAKSLAGDVNGKRREKGLLPRSVR 216

Query: 216 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRELKWVRFGKDLELLDSPGIIPMRISD 275
           AGI+GYPNVGKSSLINRLLKR++C AAPRPGVTRE+KWV+ GKDL+LLDSPG++PMRI D
Sbjct: 217 AGIIGYPNVGKSSLINRLLKRKICAAAPRPGVTREMKWVKLGKDLDLLDSPGMLPMRIDD 276

Query: 276 QTAAIKLAICDDIGERSYNAADVAAILVQILTKLPSVGTVEIF 290
           Q AAIKLAICDDIGE++Y+  DVA ILVQ+L ++P VG   ++
Sbjct: 277 QAAAIKLAICDDIGEKAYDFTDVAGILVQMLARIPEVGAKALY 318

[Close]

BLAST of Lcy02g018860 vs. ExPASy Swiss-Prot
Match: Q819W8 (Ribosome biogenesis GTPase A OS=Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NRRL B-3711) OX=226900 GN=rbgA PE=3 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.7e-37
Identity = 80/213 (37.56%), Postives = 122/213 (57.28%), Query Frame = 0


Query: 81  VQWYPGHIAKTEKELKNQLKLMDVVIEM--------------DAWLGNRRRILVLNREDM 140
           +QW+PGH+AK  +++  +LKL+DVVIE+              D  + ++ R++VLN+ DM
Sbjct: 3   IQWFPGHMAKARRQVTEKLKLIDVVIELVDARLPLSSRNPMIDEIITHKPRLVVLNKADM 62

Query: 141 ISSEDRNAWAAYFTRQGIKVVFSNGQLGMGTMKLGRLAKTLAEDVNVRRRAKGLLPRAVR 200
                   W AYF  +G   +  N Q G G  ++    K L ++   +  AKG+ PRA+R
Sbjct: 63  ADDRLTKQWIAYFKEKGHMAISINAQAGQGMKEIAAACKVLVKEKFDKMVAKGIRPRAIR 122

Query: 201 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRELKWVRFGKDLELLDSPGIIPMRISD 260
           A IVG PNVGKS+LIN+L K+ +     RPGVT   +W++ GK++ELLD+PGI+  +  D
Sbjct: 123 ALIVGIPNVGKSTLINKLAKKNIAKTGDRPGVTTAQQWIKVGKEMELLDTPGILWPKFED 182

Query: 261 QTAAIKLAICDDIGERSYNAADVAAILVQILTK 280
           Q   ++LA    I +   N  DVA   ++ + K
Sbjct: 183 QLVGLRLATTGAIKDSILNLQDVAVYALRFMEK 215

[Close]

BLAST of Lcy02g018860 vs. ExPASy Swiss-Prot
Match: E0TTS5 (Ribosome biogenesis GTPase A OS=Bacillus subtilis subsp. spizizenii (strain ATCC 23059 / NRRL B-14472 / W23) OX=655816 GN=rbgA PE=3 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 2.5e-36
Identity = 79/211 (37.44%), Postives = 123/211 (58.29%), Query Frame = 0


Query: 81  VQWYPGHIAKTEKELKNQLKLMDVVIEM--------------DAWLGNRRRILVLNREDM 140
           +QW+PGH+AK  +E+  +LKL+D+V E+              +  L N+ RI++LN+ D 
Sbjct: 3   IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62

Query: 141 ISSEDRNAWAAYFTRQGIKVVFSNGQLGMGTMKLGRLAKTLAEDVNVRRRAKGLLPRAVR 200
             +     W  +F  QGI+ +  N   G G  ++   +K + ++   R RAKG+ PRA+R
Sbjct: 63  ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122

Query: 201 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRELKWVRFGKDLELLDSPGIIPMRISD 260
           A I+G PNVGKS+LINRL K+ +     RPG+T   +WV+ GK+LELLD+PGI+  +  D
Sbjct: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182

Query: 261 QTAAIKLAICDDIGERSYNAADVAAILVQIL 278
           +   ++LA+   I +   N  DVA   ++ L
Sbjct: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGLRFL 213

[Close]

BLAST of Lcy02g018860 vs. ExPASy Swiss-Prot
Match: O31743 (Ribosome biogenesis GTPase A OS=Bacillus subtilis (strain 168) OX=224308 GN=rbgA PE=1 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 2.5e-36
Identity = 79/211 (37.44%), Postives = 123/211 (58.29%), Query Frame = 0


Query: 81  VQWYPGHIAKTEKELKNQLKLMDVVIEM--------------DAWLGNRRRILVLNREDM 140
           +QW+PGH+AK  +E+  +LKL+D+V E+              +  L N+ RI++LN+ D 
Sbjct: 3   IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62

Query: 141 ISSEDRNAWAAYFTRQGIKVVFSNGQLGMGTMKLGRLAKTLAEDVNVRRRAKGLLPRAVR 200
             +     W  +F  QGI+ +  N   G G  ++   +K + ++   R RAKG+ PRA+R
Sbjct: 63  ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122

Query: 201 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRELKWVRFGKDLELLDSPGIIPMRISD 260
           A I+G PNVGKS+LINRL K+ +     RPG+T   +WV+ GK+LELLD+PGI+  +  D
Sbjct: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182

Query: 261 QTAAIKLAICDDIGERSYNAADVAAILVQIL 278
           +   ++LA+   I +   N  DVA   ++ L
Sbjct: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGLRFL 213

[Close]

BLAST of Lcy02g018860 vs. ExPASy Swiss-Prot
Match: C5D8U8 (Ribosome biogenesis GTPase A OS=Geobacillus sp. (strain WCH70) OX=471223 GN=rbgA PE=3 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 2.5e-36
Identity = 83/212 (39.15%), Postives = 124/212 (58.49%), Query Frame = 0


Query: 81  VQWYPGHIAKTEKELKNQLKLMDVVIE-MDA-------------WLGNRRRILVLNREDM 140
           +QW+PGH+AK ++E++ +LKL+D+V E +DA              LGN+ RI++LN+ DM
Sbjct: 5   IQWFPGHMAKAKREVQEKLKLIDIVFELLDARIPLSSRNPMIHEILGNKPRIVLLNKADM 64

Query: 141 ISSEDRNAWAAYFTRQGIKVVFSNGQLGMGTMKLGRLAKTLAEDVNVRRRAKGLL-PRAV 200
                   W AYF RQ +  +  + Q G G  ++   AK + +D   +  AKG+  PR +
Sbjct: 65  ADETVTEQWIAYFERQQLHALAIDAQTGTGIRQIVSAAKEMLKDKFAKMAAKGIKNPRPM 124

Query: 201 RAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRELKWVRFGKDLELLDSPGIIPMRIS 260
           RA IVG PNVGKS+LINRL  R +     +PGVT+  +W++ GK++ELLD+PGI+  +  
Sbjct: 125 RALIVGIPNVGKSTLINRLAGRNIAKTGDKPGVTKAQQWIKVGKEMELLDTPGILWPKFE 184

Query: 261 DQTAAIKLAICDDIGERSYNAADVAAILVQIL 278
           D+   +KLA    I +   N  DVA   +  L
Sbjct: 185 DEEVGLKLATTGAIKDTILNLQDVAVYALNFL 216

[Close]

BLAST of Lcy02g018860 vs. ExPASy TrEMBL
Match: A0A6J1HS12 (DAR GTPase 3, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111466972 PE=4 SV=1)

HSP 1 Score: 493.8 bits (1270), Expect = 4.8e-136
Identity = 253/310 (81.61%), Postives = 266/310 (85.81%), Query Frame = 0


Query: 1   MSVHIQFSGLCLPTPRAIRPHLFYCRSVPSPASLTPSASVSLPQPTIQIVGGKTS----- 60
           MS+H+Q SGLCLPT RAI    FYCRS PSPASLTPSAS SLP P IQIVGG+TS     
Sbjct: 1   MSLHVQLSGLCLPTTRAIPTRHFYCRSGPSPASLTPSASASLPHPAIQIVGGRTSNFLGD 60

Query: 61  -------NSGLDERNWVDFEGDLYYWTKALRPVQWYPGHIAKTEKELKNQLKLMDVVIE- 120
                  NS L E++WVDFE DLYYWT  LRPVQWYPGHIAKTEKELK+QL+LMDVVIE 
Sbjct: 61  LSTKGAPNSDLVEKDWVDFEADLYYWTNPLRPVQWYPGHIAKTEKELKDQLRLMDVVIEV 120

Query: 121 -------------MDAWLGNRRRILVLNREDMISSEDRNAWAAYFTRQGIKVVFSNGQLG 180
                        MDAWLGNRRRILVLNREDMISS DRNAWA YFTR+GIKVVFSNG+LG
Sbjct: 121 RDARIPMSTCHPQMDAWLGNRRRILVLNREDMISSADRNAWADYFTRRGIKVVFSNGKLG 180

Query: 181 MGTMKLGRLAKTLAEDVNVRRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAP 240
           MGTMKLGRLA+TLA DVNV+RRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAP
Sbjct: 181 MGTMKLGRLARTLAADVNVKRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAP 240

Query: 241 RPGVTRELKWVRFGKDLELLDSPGIIPMRISDQTAAIKLAICDDIGERSYNAADVAAILV 285
           RPGVTREL+WVRFGKDLELLDSPGIIPMRISDQTAAIKLAICDDIGE+SYNAADVAAILV
Sbjct: 241 RPGVTRELRWVRFGKDLELLDSPGIIPMRISDQTAAIKLAICDDIGEKSYNAADVAAILV 300

[Close]

BLAST of Lcy02g018860 vs. ExPASy TrEMBL
Match: A0A5D3CV40 (DAR GTPase 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold790G001140 PE=4 SV=1)

HSP 1 Score: 491.5 bits (1264), Expect = 2.4e-135
Identity = 256/310 (82.58%), Postives = 261/310 (84.19%), Query Frame = 0


Query: 1   MSVHIQFSGLCLPTPRAIRPHLFYCRSVPSPASLTPSASVSLPQPTIQIVGGKT------ 60
           MS+HI  SG  LP  R I PHL +CRS PSP SL PSASVS P PTIQIVGGKT      
Sbjct: 1   MSLHIHPSGFFLPNTRTISPHLSFCRSGPSPPSLAPSASVSSPHPTIQIVGGKTSNFLGD 60

Query: 61  ------SNSGLDERNWVDFEGDLYYWTKALRPVQWYPGHIAKTEKELKNQLKLMDVVIE- 120
                 SNS L E +WVDFE DLYYWT  LRPVQWYPGHIAKTEKELK+QLKLMDVVIE 
Sbjct: 61  STPKGASNSDLLEGDWVDFEADLYYWTNTLRPVQWYPGHIAKTEKELKDQLKLMDVVIEV 120

Query: 121 -------------MDAWLGNRRRILVLNREDMISSEDRNAWAAYFTRQGIKVVFSNGQLG 180
                        MDAWLGNRRRILVLNREDMISS DRNAWA YFTRQGIKVVFSNGQLG
Sbjct: 121 RDARIPMSTSHPQMDAWLGNRRRILVLNREDMISSADRNAWATYFTRQGIKVVFSNGQLG 180

Query: 181 MGTMKLGRLAKTLAEDVNVRRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAP 240
           MGTMKLGRLAKTLA DVNV+RRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAP
Sbjct: 181 MGTMKLGRLAKTLAADVNVKRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAP 240

Query: 241 RPGVTRELKWVRFGKDLELLDSPGIIPMRISDQTAAIKLAICDDIGERSYNAADVAAILV 285
           RPGVTRELKWVRFGKDLELLDSPGIIPMRISDQTAAIKLAICDDIGERSYNAADVAAILV
Sbjct: 241 RPGVTRELKWVRFGKDLELLDSPGIIPMRISDQTAAIKLAICDDIGERSYNAADVAAILV 300

[Close]

BLAST of Lcy02g018860 vs. ExPASy TrEMBL
Match: A0A0A0KMJ7 (G domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G308800 PE=4 SV=1)

HSP 1 Score: 491.5 bits (1264), Expect = 2.4e-135
Identity = 257/314 (81.85%), Postives = 264/314 (84.08%), Query Frame = 0


Query: 1   MSVHIQFSGLCLPTPRAIRPHLFYCRSVPSPASLTPSASVSLPQPTIQIVGGKT------ 60
           MS+HI  SG  LP  R I P LF+CRS PSP SL PSASVS P PTIQIVGGKT      
Sbjct: 1   MSLHIHPSGFFLPNTRTIYPQLFFCRSGPSPPSLAPSASVSSPHPTIQIVGGKTSNFLGD 60

Query: 61  ------SNSGLDERNWVDFEGDLYYWTKALRPVQWYPGHIAKTEKELKNQLKLMDVVIE- 120
                 SN+ L E +WVDFE DLYYWT ALRPVQWYPGHIAKTEKELK+QLKLMDVVIE 
Sbjct: 61  STPKGASNNELLEGDWVDFEADLYYWTNALRPVQWYPGHIAKTEKELKDQLKLMDVVIEV 120

Query: 121 -------------MDAWLGNRRRILVLNREDMISSEDRNAWAAYFTRQGIKVVFSNGQLG 180
                        MDAWLGNRRRILVLNREDMISS DRNAWA YFTRQGIKVVFSNGQ G
Sbjct: 121 RDARIPMSTSHPQMDAWLGNRRRILVLNREDMISSADRNAWATYFTRQGIKVVFSNGQHG 180

Query: 181 MGTMKLGRLAKTLAEDVNVRRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAP 240
           MGTMKLGRLAKTLA DVNV+RRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAP
Sbjct: 181 MGTMKLGRLAKTLAADVNVKRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAP 240

Query: 241 RPGVTRELKWVRFGKDLELLDSPGIIPMRISDQTAAIKLAICDDIGERSYNAADVAAILV 289
           RPGVTRELKWVRFG DLELLDSPGIIPMRISDQTAAIKLAICDDIGERSYNAADVAAILV
Sbjct: 241 RPGVTRELKWVRFGNDLELLDSPGIIPMRISDQTAAIKLAICDDIGERSYNAADVAAILV 300

[Close]

BLAST of Lcy02g018860 vs. ExPASy TrEMBL
Match: A0A1S3CIW2 (DAR GTPase 3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103501342 PE=4 SV=1)

HSP 1 Score: 491.5 bits (1264), Expect = 2.4e-135
Identity = 256/310 (82.58%), Postives = 261/310 (84.19%), Query Frame = 0


Query: 1   MSVHIQFSGLCLPTPRAIRPHLFYCRSVPSPASLTPSASVSLPQPTIQIVGGKT------ 60
           MS+HI  SG  LP  R I PHL +CRS PSP SL PSASVS P PTIQIVGGKT      
Sbjct: 1   MSLHIHPSGFFLPNTRTISPHLSFCRSGPSPPSLAPSASVSSPHPTIQIVGGKTSNFLGD 60

Query: 61  ------SNSGLDERNWVDFEGDLYYWTKALRPVQWYPGHIAKTEKELKNQLKLMDVVIE- 120
                 SNS L E +WVDFE DLYYWT  LRPVQWYPGHIAKTEKELK+QLKLMDVVIE 
Sbjct: 61  STPKGASNSDLLEGDWVDFEADLYYWTNTLRPVQWYPGHIAKTEKELKDQLKLMDVVIEV 120

Query: 121 -------------MDAWLGNRRRILVLNREDMISSEDRNAWAAYFTRQGIKVVFSNGQLG 180
                        MDAWLGNRRRILVLNREDMISS DRNAWA YFTRQGIKVVFSNGQLG
Sbjct: 121 RDARIPMSTSHPQMDAWLGNRRRILVLNREDMISSADRNAWATYFTRQGIKVVFSNGQLG 180

Query: 181 MGTMKLGRLAKTLAEDVNVRRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAP 240
           MGTMKLGRLAKTLA DVNV+RRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAP
Sbjct: 181 MGTMKLGRLAKTLAADVNVKRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAP 240

Query: 241 RPGVTRELKWVRFGKDLELLDSPGIIPMRISDQTAAIKLAICDDIGERSYNAADVAAILV 285
           RPGVTRELKWVRFGKDLELLDSPGIIPMRISDQTAAIKLAICDDIGERSYNAADVAAILV
Sbjct: 241 RPGVTRELKWVRFGKDLELLDSPGIIPMRISDQTAAIKLAICDDIGERSYNAADVAAILV 300

[Close]

BLAST of Lcy02g018860 vs. ExPASy TrEMBL
Match: A0A6J1HIQ5 (DAR GTPase 3, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111463946 PE=4 SV=1)

HSP 1 Score: 491.1 bits (1263), Expect = 3.1e-135
Identity = 252/310 (81.29%), Postives = 265/310 (85.48%), Query Frame = 0


Query: 1   MSVHIQFSGLCLPTPRAIRPHLFYCRSVPSPASLTPSASVSLPQPTIQIVGGKTS----- 60
           MS+H+Q SGLCLPT RAI    FYCRS PSPASLTPSAS SLP  TIQIVGG+TS     
Sbjct: 1   MSLHVQLSGLCLPTTRAIPTRHFYCRSGPSPASLTPSASASLPHSTIQIVGGRTSNFLGD 60

Query: 61  -------NSGLDERNWVDFEGDLYYWTKALRPVQWYPGHIAKTEKELKNQLKLMDVVIE- 120
                  NS + E++WVDFE DLYYWT  LRPVQWYPGHIAKTEKELK+QL+LMDVVIE 
Sbjct: 61  LGTKGAPNSDVVEKDWVDFEADLYYWTNPLRPVQWYPGHIAKTEKELKDQLRLMDVVIEV 120

Query: 121 -------------MDAWLGNRRRILVLNREDMISSEDRNAWAAYFTRQGIKVVFSNGQLG 180
                        MDAW+GNRRRILVLNREDMISS DRNAWA YFTRQGIKVVFSNG+LG
Sbjct: 121 RDARIPMSTSHPQMDAWVGNRRRILVLNREDMISSADRNAWADYFTRQGIKVVFSNGKLG 180

Query: 181 MGTMKLGRLAKTLAEDVNVRRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAP 240
           MG MKLGRLAKTLA DVNV+RRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAP
Sbjct: 181 MGAMKLGRLAKTLAADVNVKRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAP 240

Query: 241 RPGVTRELKWVRFGKDLELLDSPGIIPMRISDQTAAIKLAICDDIGERSYNAADVAAILV 285
           RPGVTREL+WVRFGKDLELLDSPGIIPMRISDQTAAIKLAICDDIGE+SYNAADVAAILV
Sbjct: 241 RPGVTRELRWVRFGKDLELLDSPGIIPMRISDQTAAIKLAICDDIGEKSYNAADVAAILV 300

[Close]

BLAST of Lcy02g018860 vs. NCBI nr
Match: XP_038887632.1 (DAR GTPase 3, chloroplastic isoform X2 [Benincasa hispida])

HSP 1 Score: 499.2 bits (1284), Expect = 2.4e-137
Identity = 258/308 (83.77%), Postives = 265/308 (86.04%), Query Frame = 0


Query: 3   VHIQFSGLCLPTPRAIRPHLFYCRSVPSPASLTPSASVSLPQPTIQIVGGK--------- 62
           +HIQ SGLCLPT  AI PHLFYCRS PSP+SL+PS S+S   PTIQIVGGK         
Sbjct: 4   LHIQLSGLCLPTAPAISPHLFYCRSGPSPSSLSPSTSLSSSHPTIQIVGGKTSNFFGDLS 63

Query: 63  ---TSNSGLDERNWVDFEGDLYYWTKALRPVQWYPGHIAKTEKELKNQLKLMDVVIE--- 122
              TSNS L E +WVDFE DLYYWT  LRPVQWYPGHIAKTEKELK+QLKLMDVVIE   
Sbjct: 64  PKGTSNSDLLEGDWVDFEADLYYWTNTLRPVQWYPGHIAKTEKELKHQLKLMDVVIEVRD 123

Query: 123 -----------MDAWLGNRRRILVLNREDMISSEDRNAWAAYFTRQGIKVVFSNGQLGMG 182
                      MDAWLGNRRRILVLNREDMISS DRNAWAAYFTRQGIKVVFSNGQLGMG
Sbjct: 124 ARIPLSTSHPQMDAWLGNRRRILVLNREDMISSADRNAWAAYFTRQGIKVVFSNGQLGMG 183

Query: 183 TMKLGRLAKTLAEDVNVRRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRP 242
           TMKLGRLAKTLA DVNV+RRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRP
Sbjct: 184 TMKLGRLAKTLAADVNVKRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRP 243

Query: 243 GVTRELKWVRFGKDLELLDSPGIIPMRISDQTAAIKLAICDDIGERSYNAADVAAILVQI 285
           GVTRELKWVRFGKDLELLDSPGIIPMRISDQTAAIKLAICDDIGERSYNAADVAAILVQI
Sbjct: 244 GVTRELKWVRFGKDLELLDSPGIIPMRISDQTAAIKLAICDDIGERSYNAADVAAILVQI 303

[Close]

BLAST of Lcy02g018860 vs. NCBI nr
Match: KAG6571470.1 (DAR GTPase 3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 496.5 bits (1277), Expect = 1.5e-136
Identity = 255/310 (82.26%), Postives = 266/310 (85.81%), Query Frame = 0


Query: 1   MSVHIQFSGLCLPTPRAIRPHLFYCRSVPSPASLTPSASVSLPQPTIQIVGGKTS----- 60
           MS+H+Q SGLCLPT RAI    FYCRS PSPASLTPSAS SLP PTIQIVGG+TS     
Sbjct: 1   MSLHVQLSGLCLPTTRAIPTRHFYCRSGPSPASLTPSASASLPHPTIQIVGGRTSNFLGN 60

Query: 61  -------NSGLDERNWVDFEGDLYYWTKALRPVQWYPGHIAKTEKELKNQLKLMDVVIE- 120
                  NS L E++WVDFE DLYYWT  LRPVQWYPGHIAKTEKELK+QL+LMDVVIE 
Sbjct: 61  LSTKGAPNSDLVEKDWVDFEADLYYWTNPLRPVQWYPGHIAKTEKELKDQLRLMDVVIEV 120

Query: 121 -------------MDAWLGNRRRILVLNREDMISSEDRNAWAAYFTRQGIKVVFSNGQLG 180
                        MDAWLGNRRRILVLNREDMISS DRNAWA YFTRQGIKVVFSNG+LG
Sbjct: 121 RDARIPMSTSHPQMDAWLGNRRRILVLNREDMISSADRNAWADYFTRQGIKVVFSNGKLG 180

Query: 181 MGTMKLGRLAKTLAEDVNVRRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAP 240
           MG MKLGRLAKTLA DVNV+RRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAP
Sbjct: 181 MGAMKLGRLAKTLAADVNVKRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAP 240

Query: 241 RPGVTRELKWVRFGKDLELLDSPGIIPMRISDQTAAIKLAICDDIGERSYNAADVAAILV 285
           RPGVTREL+WVRFGKDLELLDSPGIIPMRISDQTAAIKLAICDDIGE+SYNAADVAAILV
Sbjct: 241 RPGVTRELRWVRFGKDLELLDSPGIIPMRISDQTAAIKLAICDDIGEKSYNAADVAAILV 300

[Close]

BLAST of Lcy02g018860 vs. NCBI nr
Match: KAG7011232.1 (DAR GTPase 3, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 495.4 bits (1274), Expect = 3.4e-136
Identity = 254/310 (81.94%), Postives = 266/310 (85.81%), Query Frame = 0


Query: 1   MSVHIQFSGLCLPTPRAIRPHLFYCRSVPSPASLTPSASVSLPQPTIQIVGGKTS----- 60
           MS+H+Q SGLCLPT RAI    FYCRS PSPASLTPSAS SLP PTIQIVGG+TS     
Sbjct: 1   MSLHVQLSGLCLPTTRAIPTRHFYCRSGPSPASLTPSASASLPHPTIQIVGGRTSNFLGD 60

Query: 61  -------NSGLDERNWVDFEGDLYYWTKALRPVQWYPGHIAKTEKELKNQLKLMDVVIE- 120
                  NS + E++WVDFE DLYYWT  LRPVQWYPGHIAKTEKELK+QL+LMDVVIE 
Sbjct: 61  LSTKGAPNSDVVEKDWVDFEADLYYWTNPLRPVQWYPGHIAKTEKELKDQLRLMDVVIEV 120

Query: 121 -------------MDAWLGNRRRILVLNREDMISSEDRNAWAAYFTRQGIKVVFSNGQLG 180
                        MDAWLGNRRRILVLNREDMISS DRNAWA YFTRQGIKVVFSNG+LG
Sbjct: 121 RDARIPMSTSHPQMDAWLGNRRRILVLNREDMISSADRNAWADYFTRQGIKVVFSNGKLG 180

Query: 181 MGTMKLGRLAKTLAEDVNVRRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAP 240
           MG MKLGRLAKTLA DVNV+RRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAP
Sbjct: 181 MGAMKLGRLAKTLAADVNVKRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAP 240

Query: 241 RPGVTRELKWVRFGKDLELLDSPGIIPMRISDQTAAIKLAICDDIGERSYNAADVAAILV 285
           RPGVTREL+WVRFGKDLELLDSPGIIPMRISDQTAAIKLAICDDIGE+SYNAADVAAILV
Sbjct: 241 RPGVTRELRWVRFGKDLELLDSPGIIPMRISDQTAAIKLAICDDIGEKSYNAADVAAILV 300

[Close]

BLAST of Lcy02g018860 vs. NCBI nr
Match: XP_023554315.1 (DAR GTPase 3, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 495.4 bits (1274), Expect = 3.4e-136
Identity = 254/310 (81.94%), Postives = 266/310 (85.81%), Query Frame = 0


Query: 1   MSVHIQFSGLCLPTPRAIRPHLFYCRSVPSPASLTPSASVSLPQPTIQIVGGKTS----- 60
           MS+H+Q SGLCLPT RAI    FYCRS PSPASLTPSAS SLP PTIQIVGG+TS     
Sbjct: 1   MSLHVQLSGLCLPTTRAIPTRHFYCRSGPSPASLTPSASASLPHPTIQIVGGRTSNFLGD 60

Query: 61  -------NSGLDERNWVDFEGDLYYWTKALRPVQWYPGHIAKTEKELKNQLKLMDVVIE- 120
                  NS + E++WVDFE DLYYWT  LRPVQWYPGHIAKTEKELK+QL+LMDVVIE 
Sbjct: 61  LSTKGAPNSDVVEKDWVDFEADLYYWTNPLRPVQWYPGHIAKTEKELKDQLRLMDVVIEV 120

Query: 121 -------------MDAWLGNRRRILVLNREDMISSEDRNAWAAYFTRQGIKVVFSNGQLG 180
                        MDAWLGNRRRILVLNREDMISS DRNAWA YFTRQGIKVVFSNG+LG
Sbjct: 121 RDARIPMSTSHPQMDAWLGNRRRILVLNREDMISSADRNAWADYFTRQGIKVVFSNGKLG 180

Query: 181 MGTMKLGRLAKTLAEDVNVRRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAP 240
           MG MKLGRLAKTLA DVNV+RRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAP
Sbjct: 181 MGAMKLGRLAKTLAADVNVKRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAP 240

Query: 241 RPGVTRELKWVRFGKDLELLDSPGIIPMRISDQTAAIKLAICDDIGERSYNAADVAAILV 285
           RPGVTREL+WVRFGKDLELLDSPGIIPMRISDQTAAIKLAICDDIGE+SYNAADVAAILV
Sbjct: 241 RPGVTRELRWVRFGKDLELLDSPGIIPMRISDQTAAIKLAICDDIGEKSYNAADVAAILV 300

[Close]

BLAST of Lcy02g018860 vs. NCBI nr
Match: XP_038887634.1 (DAR GTPase 3, chloroplastic isoform X4 [Benincasa hispida])

HSP 1 Score: 495.0 bits (1273), Expect = 4.5e-136
Identity = 257/310 (82.90%), Postives = 265/310 (85.48%), Query Frame = 0


Query: 1   MSVHIQFSGLCLPTPRAIRPHLFYCRSVPSPASLTPSASVSLPQPTIQIVGGK------- 60
           +S  I+ SGLCLPT  AI PHLFYCRS PSP+SL+PS S+S   PTIQIVGGK       
Sbjct: 5   LSSLIKLSGLCLPTAPAISPHLFYCRSGPSPSSLSPSTSLSSSHPTIQIVGGKTSNFFGD 64

Query: 61  -----TSNSGLDERNWVDFEGDLYYWTKALRPVQWYPGHIAKTEKELKNQLKLMDVVIE- 120
                TSNS L E +WVDFE DLYYWT  LRPVQWYPGHIAKTEKELK+QLKLMDVVIE 
Sbjct: 65  LSPKGTSNSDLLEGDWVDFEADLYYWTNTLRPVQWYPGHIAKTEKELKHQLKLMDVVIEV 124

Query: 121 -------------MDAWLGNRRRILVLNREDMISSEDRNAWAAYFTRQGIKVVFSNGQLG 180
                        MDAWLGNRRRILVLNREDMISS DRNAWAAYFTRQGIKVVFSNGQLG
Sbjct: 125 RDARIPLSTSHPQMDAWLGNRRRILVLNREDMISSADRNAWAAYFTRQGIKVVFSNGQLG 184

Query: 181 MGTMKLGRLAKTLAEDVNVRRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAP 240
           MGTMKLGRLAKTLA DVNV+RRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAP
Sbjct: 185 MGTMKLGRLAKTLAADVNVKRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAP 244

Query: 241 RPGVTRELKWVRFGKDLELLDSPGIIPMRISDQTAAIKLAICDDIGERSYNAADVAAILV 285
           RPGVTRELKWVRFGKDLELLDSPGIIPMRISDQTAAIKLAICDDIGERSYNAADVAAILV
Sbjct: 245 RPGVTRELKWVRFGKDLELLDSPGIIPMRISDQTAAIKLAICDDIGERSYNAADVAAILV 304

[Close]

BLAST of Lcy02g018860 vs. TAIR 10
Match: AT4G02790.1 (GTP-binding family protein )

HSP 1 Score: 367.5 bits (942), Expect = 1.0e-101
Identity = 185/283 (65.37%), Postives = 220/283 (77.74%), Query Frame = 0


Query: 36  PSASVSLPQPTIQIVGGKTSN---------------SGLDERNWVDFEGDLYYWTKALRP 95
           P+A+ S P P IQIVGGK  N               +  DE +W++ E D+  WT+ALRP
Sbjct: 37  PTANSSRP-PPIQIVGGKDLNLDVTRKDDSIGFKLEANEDEIDWMNLESDIRLWTRALRP 96

Query: 96  VQWYPGHIAKTEKELKNQLKLMDVVIE--------------MDAWLGNRRRILVLNREDM 155
           VQWYPGHI KTEKEL+ QLKLMDVVIE              MDAWLGNR+RILVLNREDM
Sbjct: 97  VQWYPGHIMKTEKELREQLKLMDVVIEVRDARIPLSTTHPKMDAWLGNRKRILVLNREDM 156

Query: 156 ISSEDRNAWAAYFTRQGIKVVFSNGQLGMGTMKLGRLAKTLAEDVNVRRRAKGLLPRAVR 215
           IS++DRN WA YF +QGIKV+F+NG+LGMG MKLGRLAK+LA DVN +RR KGLLPR+VR
Sbjct: 157 ISNDDRNDWARYFAKQGIKVIFTNGKLGMGAMKLGRLAKSLAGDVNGKRREKGLLPRSVR 216

Query: 216 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRELKWVRFGKDLELLDSPGIIPMRISD 275
           AGI+GYPNVGKSSLINRLLKR++C AAPRPGVTRE+KWV+ GKDL+LLDSPG++PMRI D
Sbjct: 217 AGIIGYPNVGKSSLINRLLKRKICAAAPRPGVTREMKWVKLGKDLDLLDSPGMLPMRIDD 276

Query: 276 QTAAIKLAICDDIGERSYNAADVAAILVQILTKLPSVGTVEIF 290
           Q AAIKLAICDDIGE++Y+  DVA ILVQ+L ++P VG   ++
Sbjct: 277 QAAAIKLAICDDIGEKAYDFTDVAGILVQMLARIPEVGAKALY 318

[Close]

BLAST of Lcy02g018860 vs. TAIR 10
Match: AT2G41670.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 88.2 bits (217), Expect = 1.2e-17
Identity = 61/226 (26.99%), Postives = 102/226 (45.13%), Query Frame = 0


Query: 81  VQWYPGHIAKTEKELKNQLKLMDVVIE--------------MDAWLGNRRRILVLNREDM 140
           + W+PGH+A   + ++N+LKL D+VIE              + + +  +RRI+ LN++D+
Sbjct: 26  INWFPGHMAAATRAIRNRLKLSDLVIEVRDARIPLSSANEDLQSQMSAKRRIIALNKKDL 85

Query: 141 ISSEDRNAWAAYFTRQGIKVVFSNGQLGMGTMKLGRLAKTLAEDVNVRRRAKGLLPRAVR 200
            +    N W  +F       +  N       MKL  L +   ++V  R     ++     
Sbjct: 86  ANPNVLNKWTRHFESSKQDCIAINAHSRSSVMKLLDLVELKLKEVIAREPTLLVM----- 145

Query: 201 AGIVGYPNVGKSSLINRL-------------LKRRMCPAAPRPGVTRELKWVRFG--KDL 260
             +VG PNVGKS+LIN +             LKR      P PGVT+++   +      +
Sbjct: 146 --VVGVPNVGKSALINSIHQIAAARFPVQERLKR--ATVGPLPGVTQDIAGFKIAHRPSI 205

Query: 261 ELLDSPGIIPMRISDQTAAIKLAICDDIGERSYNAADVAAILVQIL 278
            +LDSPG++   I D    +KLA+   + +       +A   + IL
Sbjct: 206 YVLDSPGVLVPSIPDIETGLKLALSGSVKDSVVGEERIAQYFLAIL 242

[Close]

BLAST of Lcy02g018860 vs. TAIR 10
Match: AT3G07050.1 (GTP-binding family protein )

HSP 1 Score: 79.7 bits (195), Expect = 4.2e-15
Identity = 70/239 (29.29%), Postives = 108/239 (45.19%), Query Frame = 0


Query: 93  KELKNQLKLMDVVIE-MDAW--LG---------------NRRRILVLNREDMISSEDRNA 152
           KEL   ++L DV++E +DA   LG               N+  +L+LN+ D++  E    
Sbjct: 128 KELVKVIELSDVILEVLDARDPLGTRCTDMERMVMQAGPNKHLVLLLNKIDLVPREAAEK 187

Query: 153 WAAYFTRQGIKVVF------SNGQLGMGTMKLGRL-----------AKTLAEDVNVRRRA 212
           W  Y   +   V F          LG  + K  +            A TL + +    R+
Sbjct: 188 WLMYLREEFPAVAFKCSTQEQRSNLGWKSSKASKPSNMLQTSDCLGADTLIKLLKNYSRS 247

Query: 213 KGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRELKWVRFGKDLELLDSP 272
              L +++  GI+G PNVGKSSLIN L +  +      PG+TR L+ V   K+++LLD P
Sbjct: 248 HE-LKKSITVGIIGLPNVGKSSLINSLKRAHVVNVGATPGLTRSLQEVHLDKNVKLLDCP 307

Query: 273 GIIPMRISDQTAAIKLAICDDIGERSYNAADVAAIL-------VQILTKLPSVGTVEIF 290
           G++ ++ S   A+I L  C  I +     + V  IL       +  L K+PS   V+ F
Sbjct: 308 GVVMLKSSGNDASIALRNCKRIEKLDDPVSPVKEILKLCPKDMLVTLYKIPSFEAVDDF 365

[Close]

BLAST of Lcy02g018860 vs. TAIR 10
Match: AT1G52980.1 (GTP-binding family protein )

HSP 1 Score: 65.9 bits (159), Expect = 6.3e-11
Identity = 39/132 (29.55%), Postives = 68/132 (51.52%), Query Frame = 0


Query: 114 NRRRILVLNREDMISSEDRNAWAAYFTRQGIKVVFS---NGQLGMGTMKLGRLAKTLAED 173
           ++  IL+LN+ D++ +     W    +++   + F    N   G G++            
Sbjct: 246 HKHMILLLNKCDLVPAWATKGWLRVLSKEYPTLAFHASVNKSFGKGSL------------ 305

Query: 174 VNVRRRAKGLL--PRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRELKWVRFG 233
           ++V R+   L    +A+  G VGYPNVGKSS+IN L  + +C  AP PG T+  +++   
Sbjct: 306 LSVLRQFARLKSDKQAISVGFVGYPNVGKSSVINTLRTKNVCKVAPIPGETKVWQYITLT 365

Query: 234 KDLELLDSPGII 241
           K + L+D PG++
Sbjct: 366 KRIFLIDCPGVV 365

[Close]

BLAST of Lcy02g018860 vs. TAIR 10
Match: AT2G27200.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 65.1 bits (157), Expect = 1.1e-10
Identity = 45/164 (27.44%), Postives = 75/164 (45.73%), Query Frame = 0


Query: 114 NRRRILVLNREDMISSEDRNAWAAYFTRQGIKVVFSNGQLGMGTMK-------------- 173
           +++ +L++N+ D++ S  R  WA YF+R  I  VF + +    T++              
Sbjct: 198 HKKTMLLVNKADLLPSYVREKWAEYFSRNNILFVFWSAKAATATLEGKPLKEQWRAPDTT 257

Query: 174 ----------------LGRLAKTLAEDVNVRRRAKGLLPRA-------VRAGIVGYPNVG 233
                           L RL K  A ++   R+++G+   +       V  G VGYPNVG
Sbjct: 258 QKTDNPAVKVYGRDDLLDRL-KLEALEIVKMRKSRGVSATSTESHCEQVVVGFVGYPNVG 317

Query: 234 KSSLINRLLKRRMCPAAPRPGVTRELKWVRFGKDLELLDSPGII 241
           KSS IN L+ ++       PG T+  + +   +DL L D PG++
Sbjct: 318 KSSTINALVGQKRTGVTSTPGKTKHFQTLIISEDLMLCDCPGLV 360

The following BLAST results are available for this feature:

BLAST of Lcy02g018860 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8H1F6	1.4e-100	65.37	DAR GTPase 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DGP3 PE=2 SV=1	[more]
Q819W8	1.7e-37	37.56	Ribosome biogenesis GTPase A OS=Bacillus cereus (strain ATCC 14579 / DSM 31 / JC...	[more]
E0TTS5	2.5e-36	37.44	Ribosome biogenesis GTPase A OS=Bacillus subtilis subsp. spizizenii (strain ATCC...	[more]
O31743	2.5e-36	37.44	Ribosome biogenesis GTPase A OS=Bacillus subtilis (strain 168) OX=224308 GN=rbgA...	[more]
C5D8U8	2.5e-36	39.15	Ribosome biogenesis GTPase A OS=Geobacillus sp. (strain WCH70) OX=471223 GN=rbgA...	[more]

BLAST of Lcy02g018860 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HS12	4.8e-136	81.61	DAR GTPase 3, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111466972 PE=4 SV=...	[more]
A0A5D3CV40	2.4e-135	82.58	DAR GTPase 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold790G001140 ...	[more]
A0A0A0KMJ7	2.4e-135	81.85	G domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G308800 PE=4 SV=1	[more]
A0A1S3CIW2	2.4e-135	82.58	DAR GTPase 3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103501342 PE=4 SV=1	[more]
A0A6J1HIQ5	3.1e-135	81.29	DAR GTPase 3, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111463946 PE=4 S...	[more]

BLAST of Lcy02g018860 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038887632.1	2.4e-137	83.77	DAR GTPase 3, chloroplastic isoform X2 [Benincasa hispida]	[more]
KAG6571470.1	1.5e-136	82.26	DAR GTPase 3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7011232.1	3.4e-136	81.94	DAR GTPase 3, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma...	[more]
XP_023554315.1	3.4e-136	81.94	DAR GTPase 3, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
XP_038887634.1	4.5e-136	82.90	DAR GTPase 3, chloroplastic isoform X4 [Benincasa hispida]	[more]

BLAST of Lcy02g018860 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G02790.1	1.0e-101	65.37	GTP-binding family protein	[more]
AT2G41670.1	1.2e-17	26.99	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT3G07050.1	4.2e-15	29.29	GTP-binding family protein	[more]
AT1G52980.1	6.3e-11	29.55	GTP-binding family protein	[more]
AT2G27200.1	1.1e-10	27.44	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006073	GTP binding domain	PRINTS	PR00326	GTP1OBG	coord: 187..207 score: 49.84 coord: 233..248 score: 27.26
IPR006073	GTP binding domain	PFAM	PF01926	MMR_HSR1	coord: 187..274 e-value: 1.1E-15 score: 57.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 81..240 e-value: 2.7E-34 score: 120.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 87..254
None	No IPR available	PANTHER	PTHR45782	MITOCHONDRIAL RIBOSOME-ASSOCIATED GTPASE 1	coord: 56..285
None	No IPR available	PANTHER	PTHR45782:SF5	DAR GTPASE 3, CHLOROPLASTIC	coord: 56..285
None	No IPR available	CDD	cd01856	YlqF	coord: 83..239 e-value: 3.12187E-65 score: 200.062

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy02g018860.1	Lcy02g018860.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005525	GTP binding