Lcy02g018560 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy02g018560
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	calmodulin-like
Location	Chr02: 45726815 .. 45728709 (+)
RNA-Seq Expression	Lcy02g018560
Synteny	Lcy02g018560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATAGGTAAAATAACTTAATTGCAACGGTCAGGCAAAGACAGCTGCCCGGGCAATTGTTTGAGTTCCTTCTCTATCGGAAGATCCCGTGTAACTCCAATCGAAACATATTTAGATGAAATTTCTGCAACTTTAAGATTGTTTAATGAACTTAACAGGTCCGATTTGGTTGACCCCAAGAAATGGAGTCTGAAATTGCCCATTATCTCAATCGCATGCGGTTGATTTTGAATTTTTATTTTGTGGGGGGTCCAAGAAAGCCTGTCTATCTAGAAATTTTCTCATTCAAAGCGGCGAAAATTTTCTGGGAAGATCGTGGTTCTCTTCTCTTTTAGCGCGTTTGACTATTCCAATTTTCATTGAACAATCAACAATATTATTCTCTTTTTTGGGTCACCTACTGATTGCAACATGTATATAAGAATAAATTTTGGAGTCCCATTGCACCACAACTCCTTGGTTTTCTTCTTCTCGTTTTCATTTCTGTCGATCGTTCATAACAGCGACCCAACTTATTATGGCTGCTGAAGCTCTTACGGAGGATCAGATCGCTGATTTTCGTGAAGCCTTCTGTTTAATCGACAAGGATGCGGATGGTGGGTTCTTCTTTCTCTTCCTTTTTGTTATTGCCCACCACCTGTTTGTTGTTTTTCCTGAATGAAACATGAGGCTGAAATTTGTAGTTTATTCATTAGTCTTCAAAATCGGTTCTGTGATAACATACTTGAGCATGGTATGATCTGTTTTCATAACATTGGTAGAGATTTAAACCCTTTGACTCTTAAGTTGAGAGTATATACCTTAACCACTTGGTTGGCAATCACTGAGTTGTTATTCATCTTAGGGTTATGATAGTCTGAACTTTTACAAGTCAAAATTAGTTTCTTTTTTGAGTTTAAAAAAGGGGGAAGGATTGGAATGATTGTTAAATGAAACTTGTGGGGATGTTTGTAGGATTCATCTCTGTGGAAGAGCTAGCTGCAGTGATTCAGTCATTGGATGGACATCCTACCAAGAATGAAGTTAGAGACATGATAAGCGAAGTCGATGTCGACGCCAACGGGACGTTAGATTTTGATGAGTTTCTAAATGTCATGGCAAGGAAAATGAAGGTAAAAGAGCAAAATAAAGGGTAGAAATGAATTGTCATAGCCATTTTCGTGTACATGGTGGCTGAGAAGGGGTTGGCTTTTGCAGGACAATGTTACTGAGGAGCTAAAAGAAGCCTTCAAAGTGTTTGATAGGGACCAAGACGGTTATATCTCAGCTTTTGAGGTAAAATTTCAATCTCTCTCTCTTCCATTTCTCCCTGAATTGGGTCTGATGATATACACAAACACTTTTCAAACACAGAGATTTTCATTTTGCCTAAAGGTCTCTTAGAGATCTCTCTCTGCTGTTATGATTGTTGTTATTTGCCTGCCTCTTGAACTCATTTGAAGGCCATTGCCATTGGTCAAAGAAAACCAAAAGGCAGGGCAATCTACTTTAAAACCTGAAAGTCAACAAACAATTCATAAAAACCTCCATTATATTATTGTCTGAAATTAGCTTAATTGATAAGCCAAACGTCTTACCGACAAAGTGCTTTCCACGATTTGAATCTGCAGCTGAGAAATGTTATGATAAATTTGGGAGAGAGATTGACAGATGACGAGGCTGAACAAATGATTCGAGAGGCCGATTTGGATGGCGATGGCAGAGTGAGTTATGAAGAGTTTGCTAGGATTATGACAATCAGTTGATCTCATTTCAACATGTAATGTACATTAGATGAAACTTTACAATCCTAGGAACAATCTTTCATTTATGTTTATTGATACCATTTTCCCTCACTGTAAATCAGGATATTAAAAGTTGAGATTTATTAATGAAGAGCAAGAAATGTGATTTCCCC

mRNA sequence

CATAGGTAAAATAACTTAATTGCAACGGTCAGGCAAAGACAGCTGCCCGGGCAATTGTTTGAGTTCCTTCTCTATCGGAAGATCCCGTGTAACTCCAATCGAAACATATTTAGATGAAATTTCTGCAACTTTAAGATTGTTTAATGAACTTAACAGGTCCGATTTGGTTGACCCCAAGAAATGGAGTCTGAAATTGCCCATTATCTCAATCGCATGCGGTTGATTTTGAATTTTTATTTTGTGGGGGGTCCAAGAAAGCCTGTCTATCTAGAAATTTTCTCATTCAAAGCGGCGAAAATTTTCTGGGAAGATCGTGGTTCTCTTCTCTTTTAGCGCGTTTGACTATTCCAATTTTCATTGAACAATCAACAATATTATTCTCTTTTTTGGGTCACCTACTGATTGCAACATGTATATAAGAATAAATTTTGGAGTCCCATTGCACCACAACTCCTTGGTTTTCTTCTTCTCGTTTTCATTTCTGTCGATCGTTCATAACAGCGACCCAACTTATTATGGCTGCTGAAGCTCTTACGGAGGATCAGATCGCTGATTTTCGTGAAGCCTTCTGTTTAATCGACAAGGATGCGGATGGATTCATCTCTGTGGAAGAGCTAGCTGCAGTGATTCAGTCATTGGATGGACATCCTACCAAGAATGAAGTTAGAGACATGATAAGCGAAGTCGATGTCGACGCCAACGGGACGTTAGATTTTGATGAGTTTCTAAATGTCATGGCAAGGAAAATGAAGGACAATGTTACTGAGGAGCTAAAAGAAGCCTTCAAAGTGTTTGATAGGGACCAAGACGGTTATATCTCAGCTTTTGAGCTGAGAAATGTTATGATAAATTTGGGAGAGAGATTGACAGATGACGAGGCTGAACAAATGATTCGAGAGGCCGATTTGGATGGCGATGGCAGAGTGAGTTATGAAGAGTTTGCTAGGATTATGACAATCAGTTGATCTCATTTCAACATGTAATGTACATTAGATGAAACTTTACAATCCTAGGAACAATCTTTCATTTATGTTTATTGATACCATTTTCCCTCACTGTAAATCAGGATATTAAAAGTTGAGATTTATTAATGAAGAGCAAGAAATGTGATTTCCCC

Coding sequence (CDS)

ATGGCTGCTGAAGCTCTTACGGAGGATCAGATCGCTGATTTTCGTGAAGCCTTCTGTTTAATCGACAAGGATGCGGATGGATTCATCTCTGTGGAAGAGCTAGCTGCAGTGATTCAGTCATTGGATGGACATCCTACCAAGAATGAAGTTAGAGACATGATAAGCGAAGTCGATGTCGACGCCAACGGGACGTTAGATTTTGATGAGTTTCTAAATGTCATGGCAAGGAAAATGAAGGACAATGTTACTGAGGAGCTAAAAGAAGCCTTCAAAGTGTTTGATAGGGACCAAGACGGTTATATCTCAGCTTTTGAGCTGAGAAATGTTATGATAAATTTGGGAGAGAGATTGACAGATGACGAGGCTGAACAAATGATTCGAGAGGCCGATTTGGATGGCGATGGCAGAGTGAGTTATGAAGAGTTTGCTAGGATTATGACAATCAGTTGA

Protein sequence

MAAEALTEDQIADFREAFCLIDKDADGFISVEELAAVIQSLDGHPTKNEVRDMISEVDVDANGTLDFDEFLNVMARKMKDNVTEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDDEAEQMIREADLDGDGRVSYEEFARIMTIS

Homology

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BLAST of Lcy02g018560 vs. ExPASy Swiss-Prot
Match: O23320 (Calmodulin-like protein 8 OS=Arabidopsis thaliana OX=3702 GN=CML8 PE=1 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 1.7e-49
Identity = 96/147 (65.31%), Postives = 127/147 (86.39%), Query Frame = 0


Query: 1   MAAEALTEDQIADFREAFCLIDKDADGFISVEELAAVIQSLDGHPTKNEVRDMISEVDVD 60
           M   ALT+DQI +F+EAFCL DKD DG I+VEELA VI+SLD +PT+ E+ D+I+E+D D
Sbjct: 1   MEETALTKDQITEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEQELHDIITEIDSD 60

Query: 61  ANGTLDFDEFLNVMARKMKD-NVTEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTD 120
           +NGT++F EFLN+MA+K+++ +  EELKEAFKVFD+DQ+GYISA EL +VMINLGE+LTD
Sbjct: 61  SNGTIEFAEFLNLMAKKLQESDAEEELKEAFKVFDKDQNGYISASELSHVMINLGEKLTD 120

Query: 121 DEAEQMIREADLDGDGRVSYEEFARIM 147
           +E EQMI+EADLDGDG+V+Y+EF ++M
Sbjct: 121 EEVEQMIKEADLDGDGQVNYDEFVKMM 147

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BLAST of Lcy02g018560 vs. ExPASy Swiss-Prot
Match: P27161 (Calmodulin OS=Solanum lycopersicum OX=4081 GN=CALM1 PE=2 SV=2)

HSP 1 Score: 195.7 bits (496), Expect = 3.8e-49
Identity = 98/145 (67.59%), Postives = 124/145 (85.52%), Query Frame = 0


Query: 3   AEALTEDQIADFREAFCLIDKDADGFISVEELAAVIQSLDGHPTKNEVRDMISEVDVDAN 62
           AE LTE+QIA+F+EAF L DKD DG I+ +EL  V++SL  +PT+ E++DMISEVD D N
Sbjct: 2   AEQLTEEQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMISEVDADQN 61

Query: 63  GTLDFDEFLNVMARKMKD-NVTEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDDE 122
           GT+DF EFLN+MARKMKD +  EELKEAFKVFD+DQ+G+ISA ELR+VM NLGE+LTD+E
Sbjct: 62  GTIDFPEFLNLMARKMKDTDSEEELKEAFKVFDKDQNGFISAAELRHVMTNLGEKLTDEE 121

Query: 123 AEQMIREADLDGDGRVSYEEFARIM 147
            ++MIREAD+DGDG+V+YEEF R+M
Sbjct: 122 VDEMIREADIDGDGQVNYEEFVRMM 146

[Close]

BLAST of Lcy02g018560 vs. ExPASy Swiss-Prot
Match: Q9LIK5 (Calmodulin-like protein 11 OS=Arabidopsis thaliana OX=3702 GN=CML11 PE=2 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 5.0e-49
Identity = 93/147 (63.27%), Postives = 127/147 (86.39%), Query Frame = 0


Query: 4   EALTEDQIADFREAFCLIDKDADGFISVEELAAVIQSLDGHPTKNEVRDMISEVDVDANG 63
           + LT++QI +F+EAFCL DKD DG I+ +ELA VI+SLD +PT+ E++DMI+E+D D NG
Sbjct: 26  QELTQEQIMEFKEAFCLFDKDGDGCITADELATVIRSLDQNPTEQELQDMITEIDSDGNG 85

Query: 64  TLDFDEFLNVMARKMKD-NVTEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDDEA 123
           T++F EFLN+MA ++++ +  EELKEAFKVFD+DQ+GYISA ELR+VMINLGE+LTD+E 
Sbjct: 86  TIEFSEFLNLMANQLQETDADEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEV 145

Query: 124 EQMIREADLDGDGRVSYEEFARIMTIS 150
           +QMI+EADLDGDG+V+Y+EF R+M I+
Sbjct: 146 DQMIKEADLDGDGQVNYDEFVRMMMIN 172

[Close]

BLAST of Lcy02g018560 vs. ExPASy Swiss-Prot
Match: P27163 (Calmodulin-2 OS=Petunia hybrida OX=4102 GN=CAM72 PE=2 SV=2)

HSP 1 Score: 194.9 bits (494), Expect = 6.5e-49
Identity = 97/145 (66.90%), Postives = 124/145 (85.52%), Query Frame = 0


Query: 3   AEALTEDQIADFREAFCLIDKDADGFISVEELAAVIQSLDGHPTKNEVRDMISEVDVDAN 62
           AE LTE+QIA+F+EAF L DKD DG I+ +EL  V++SL  +PT+ E++DMISEVD D N
Sbjct: 2   AEQLTEEQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMISEVDADQN 61

Query: 63  GTLDFDEFLNVMARKMKD-NVTEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDDE 122
           GT+DF EFLN+MARKMKD +  EELKEAFKVFD+DQ+GYISA ++R+VM NLGE+LTD+E
Sbjct: 62  GTIDFPEFLNLMARKMKDTDSEEELKEAFKVFDKDQNGYISAADVRHVMTNLGEKLTDEE 121

Query: 123 AEQMIREADLDGDGRVSYEEFARIM 147
            ++MIREAD+DGDG+V+YEEF R+M
Sbjct: 122 VDEMIREADMDGDGQVNYEEFVRMM 146

[Close]

BLAST of Lcy02g018560 vs. ExPASy Swiss-Prot
Match: P13868 (Calmodulin-1 OS=Solanum tuberosum OX=4113 GN=PCM1 PE=1 SV=2)

HSP 1 Score: 194.1 bits (492), Expect = 1.1e-48
Identity = 97/145 (66.90%), Postives = 123/145 (84.83%), Query Frame = 0


Query: 3   AEALTEDQIADFREAFCLIDKDADGFISVEELAAVIQSLDGHPTKNEVRDMISEVDVDAN 62
           AE LTE+QIA+F+EAF L DKD DG I+ +EL  V++SL  +PT+ E++DMISE D D N
Sbjct: 2   AEQLTEEQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMISEADADQN 61

Query: 63  GTLDFDEFLNVMARKMKD-NVTEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDDE 122
           GT+DF EFLN+MARKMKD +  EELKEAFKVFD+DQ+G+ISA ELR+VM NLGE+LTD+E
Sbjct: 62  GTIDFPEFLNLMARKMKDTDSEEELKEAFKVFDKDQNGFISAAELRHVMTNLGEKLTDEE 121

Query: 123 AEQMIREADLDGDGRVSYEEFARIM 147
            ++MIREAD+DGDG+V+YEEF R+M
Sbjct: 122 VDEMIREADIDGDGQVNYEEFVRMM 146

[Close]

BLAST of Lcy02g018560 vs. ExPASy TrEMBL
Match: A0A1S3BL89 (calmodulin-like OS=Cucumis melo OX=3656 GN=LOC103491266 PE=4 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 5.7e-72
Identity = 143/149 (95.97%), Postives = 146/149 (97.99%), Query Frame = 0


Query: 1   MAAEALTEDQIADFREAFCLIDKDADGFISVEELAAVIQSLDGHPTKNEVRDMISEVDVD 60
           MAAEALTEDQIADFREAFCLIDKDADGFI+VEEL AVIQSLD HPTKNE+RDMISEVDVD
Sbjct: 1   MAAEALTEDQIADFREAFCLIDKDADGFITVEELGAVIQSLDVHPTKNEIRDMISEVDVD 60

Query: 61  ANGTLDFDEFLNVMARKMKDNVTEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDD 120
            NGT+DFDEFLNVMARKMKDNVTEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDD
Sbjct: 61  NNGTIDFDEFLNVMARKMKDNVTEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDD 120

Query: 121 EAEQMIREADLDGDGRVSYEEFARIMTIS 150
           EAEQMIREADLDGDGRVSYEEFARIMTIS
Sbjct: 121 EAEQMIREADLDGDGRVSYEEFARIMTIS 149

[Close]

BLAST of Lcy02g018560 vs. ExPASy TrEMBL
Match: A0A6J1HLH5 (calmodulin-like OS=Cucurbita moschata OX=3662 GN=LOC111464061 PE=4 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 9.7e-72
Identity = 141/149 (94.63%), Postives = 147/149 (98.66%), Query Frame = 0


Query: 1   MAAEALTEDQIADFREAFCLIDKDADGFISVEELAAVIQSLDGHPTKNEVRDMISEVDVD 60
           MAAEALTEDQIADFREAFCLIDKDADGFI+VEEL A IQ+LDGHPTKNEVRDMISEVDVD
Sbjct: 1   MAAEALTEDQIADFREAFCLIDKDADGFITVEELGAAIQTLDGHPTKNEVRDMISEVDVD 60

Query: 61  ANGTLDFDEFLNVMARKMKDNVTEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDD 120
           +NGT+DF+EFLNVMARKMKDNV+EELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDD
Sbjct: 61  SNGTIDFEEFLNVMARKMKDNVSEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDD 120

Query: 121 EAEQMIREADLDGDGRVSYEEFARIMTIS 150
           EAEQMIREADLDGDGRVSYEEFARIMTIS
Sbjct: 121 EAEQMIREADLDGDGRVSYEEFARIMTIS 149

[Close]

BLAST of Lcy02g018560 vs. ExPASy TrEMBL
Match: A0A5A7UTD2 (Calmodulin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G00850 PE=4 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 1.3e-71
Identity = 142/149 (95.30%), Postives = 146/149 (97.99%), Query Frame = 0


Query: 1   MAAEALTEDQIADFREAFCLIDKDADGFISVEELAAVIQSLDGHPTKNEVRDMISEVDVD 60
           MAAEALTEDQIADFREAFCLIDKDADGFI+VEEL AVIQSLD HPTKNE+RDMISEVDVD
Sbjct: 1   MAAEALTEDQIADFREAFCLIDKDADGFITVEELGAVIQSLDVHPTKNEIRDMISEVDVD 60

Query: 61  ANGTLDFDEFLNVMARKMKDNVTEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDD 120
            NGT+DFDEFLNVMARKMKDNVTEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDD
Sbjct: 61  NNGTIDFDEFLNVMARKMKDNVTEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDD 120

Query: 121 EAEQMIREADLDGDGRVSYEEFARIMTIS 150
           EAEQMIREADLDGDGRVSYEEFARIMTI+
Sbjct: 121 EAEQMIREADLDGDGRVSYEEFARIMTIN 149

[Close]

BLAST of Lcy02g018560 vs. ExPASy TrEMBL
Match: A0A0A0LLR3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G228380 PE=4 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 1.3e-71
Identity = 142/149 (95.30%), Postives = 146/149 (97.99%), Query Frame = 0


Query: 1   MAAEALTEDQIADFREAFCLIDKDADGFISVEELAAVIQSLDGHPTKNEVRDMISEVDVD 60
           MAAEALTEDQIADFREAFCLIDKDADGFI++EEL AVIQSLD HPTKNE+RDMISEVDVD
Sbjct: 1   MAAEALTEDQIADFREAFCLIDKDADGFITMEELGAVIQSLDVHPTKNEIRDMISEVDVD 60

Query: 61  ANGTLDFDEFLNVMARKMKDNVTEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDD 120
            NGT+DFDEFLNVMARKMKDNVTEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDD
Sbjct: 61  NNGTIDFDEFLNVMARKMKDNVTEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDD 120

Query: 121 EAEQMIREADLDGDGRVSYEEFARIMTIS 150
           EAEQMIREADLDGDGRVSYEEFARIMTIS
Sbjct: 121 EAEQMIREADLDGDGRVSYEEFARIMTIS 149

[Close]

BLAST of Lcy02g018560 vs. ExPASy TrEMBL
Match: A0A6J1HUX6 (calmodulin-like OS=Cucurbita maxima OX=3661 GN=LOC111466922 PE=4 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 1.6e-71
Identity = 141/149 (94.63%), Postives = 146/149 (97.99%), Query Frame = 0


Query: 1   MAAEALTEDQIADFREAFCLIDKDADGFISVEELAAVIQSLDGHPTKNEVRDMISEVDVD 60
           MAAEALTEDQIADFREAFCLIDKDADGFI+VEEL A IQ+LDGHPTKNEVRDMISEVDVD
Sbjct: 1   MAAEALTEDQIADFREAFCLIDKDADGFITVEELGAAIQTLDGHPTKNEVRDMISEVDVD 60

Query: 61  ANGTLDFDEFLNVMARKMKDNVTEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDD 120
           +NG +DFDEFLNVMARKMKDNV+EELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDD
Sbjct: 61  SNGMIDFDEFLNVMARKMKDNVSEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDD 120

Query: 121 EAEQMIREADLDGDGRVSYEEFARIMTIS 150
           EAEQMIREADLDGDGRVSYEEFARIMTIS
Sbjct: 121 EAEQMIREADLDGDGRVSYEEFARIMTIS 149

[Close]

BLAST of Lcy02g018560 vs. NCBI nr
Match: XP_038888336.1 (calmodulin-like [Benincasa hispida])

HSP 1 Score: 284.6 bits (727), Expect = 4.8e-73
Identity = 144/149 (96.64%), Postives = 148/149 (99.33%), Query Frame = 0


Query: 1   MAAEALTEDQIADFREAFCLIDKDADGFISVEELAAVIQSLDGHPTKNEVRDMISEVDVD 60
           MAAEALTEDQ+ADFREAFCLIDKDADGFI+VEEL AVIQSLDGHPTKNEVRDMISEVDVD
Sbjct: 1   MAAEALTEDQVADFREAFCLIDKDADGFITVEELGAVIQSLDGHPTKNEVRDMISEVDVD 60

Query: 61  ANGTLDFDEFLNVMARKMKDNVTEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDD 120
           +NGT+DFDEFLNVMARKMKDNVTEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDD
Sbjct: 61  SNGTIDFDEFLNVMARKMKDNVTEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDD 120

Query: 121 EAEQMIREADLDGDGRVSYEEFARIMTIS 150
           EAEQMIREADLDGDGRVSYEEFARIMTIS
Sbjct: 121 EAEQMIREADLDGDGRVSYEEFARIMTIS 149

[Close]

BLAST of Lcy02g018560 vs. NCBI nr
Match: XP_008449367.1 (PREDICTED: calmodulin-like [Cucumis melo])

HSP 1 Score: 280.0 bits (715), Expect = 1.2e-71
Identity = 143/149 (95.97%), Postives = 146/149 (97.99%), Query Frame = 0


Query: 1   MAAEALTEDQIADFREAFCLIDKDADGFISVEELAAVIQSLDGHPTKNEVRDMISEVDVD 60
           MAAEALTEDQIADFREAFCLIDKDADGFI+VEEL AVIQSLD HPTKNE+RDMISEVDVD
Sbjct: 1   MAAEALTEDQIADFREAFCLIDKDADGFITVEELGAVIQSLDVHPTKNEIRDMISEVDVD 60

Query: 61  ANGTLDFDEFLNVMARKMKDNVTEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDD 120
            NGT+DFDEFLNVMARKMKDNVTEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDD
Sbjct: 61  NNGTIDFDEFLNVMARKMKDNVTEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDD 120

Query: 121 EAEQMIREADLDGDGRVSYEEFARIMTIS 150
           EAEQMIREADLDGDGRVSYEEFARIMTIS
Sbjct: 121 EAEQMIREADLDGDGRVSYEEFARIMTIS 149

[Close]

BLAST of Lcy02g018560 vs. NCBI nr
Match: XP_022963884.1 (calmodulin-like [Cucurbita moschata] >XP_022963885.1 calmodulin-like [Cucurbita moschata])

HSP 1 Score: 279.3 bits (713), Expect = 2.0e-71
Identity = 141/149 (94.63%), Postives = 147/149 (98.66%), Query Frame = 0


Query: 1   MAAEALTEDQIADFREAFCLIDKDADGFISVEELAAVIQSLDGHPTKNEVRDMISEVDVD 60
           MAAEALTEDQIADFREAFCLIDKDADGFI+VEEL A IQ+LDGHPTKNEVRDMISEVDVD
Sbjct: 1   MAAEALTEDQIADFREAFCLIDKDADGFITVEELGAAIQTLDGHPTKNEVRDMISEVDVD 60

Query: 61  ANGTLDFDEFLNVMARKMKDNVTEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDD 120
           +NGT+DF+EFLNVMARKMKDNV+EELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDD
Sbjct: 61  SNGTIDFEEFLNVMARKMKDNVSEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDD 120

Query: 121 EAEQMIREADLDGDGRVSYEEFARIMTIS 150
           EAEQMIREADLDGDGRVSYEEFARIMTIS
Sbjct: 121 EAEQMIREADLDGDGRVSYEEFARIMTIS 149

[Close]

BLAST of Lcy02g018560 vs. NCBI nr
Match: KAG6571450.1 (2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 279.3 bits (713), Expect = 2.0e-71
Identity = 141/149 (94.63%), Postives = 147/149 (98.66%), Query Frame = 0


Query: 1   MAAEALTEDQIADFREAFCLIDKDADGFISVEELAAVIQSLDGHPTKNEVRDMISEVDVD 60
           MAAEALTEDQIADFREAFCLIDKDADGFI+VEEL A IQ+LDGHPTKNEVRDMISEVDVD
Sbjct: 351 MAAEALTEDQIADFREAFCLIDKDADGFITVEELGAAIQTLDGHPTKNEVRDMISEVDVD 410

Query: 61  ANGTLDFDEFLNVMARKMKDNVTEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDD 120
           +NGT+DF+EFLNVMARKMKDNV+EELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDD
Sbjct: 411 SNGTIDFEEFLNVMARKMKDNVSEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDD 470

Query: 121 EAEQMIREADLDGDGRVSYEEFARIMTIS 150
           EAEQMIREADLDGDGRVSYEEFARIMTIS
Sbjct: 471 EAEQMIREADLDGDGRVSYEEFARIMTIS 499

[Close]

BLAST of Lcy02g018560 vs. NCBI nr
Match: XP_004145368.1 (calmodulin [Cucumis sativus] >KGN61702.1 hypothetical protein Csa_006028 [Cucumis sativus])

HSP 1 Score: 278.9 bits (712), Expect = 2.6e-71
Identity = 142/149 (95.30%), Postives = 146/149 (97.99%), Query Frame = 0


Query: 1   MAAEALTEDQIADFREAFCLIDKDADGFISVEELAAVIQSLDGHPTKNEVRDMISEVDVD 60
           MAAEALTEDQIADFREAFCLIDKDADGFI++EEL AVIQSLD HPTKNE+RDMISEVDVD
Sbjct: 1   MAAEALTEDQIADFREAFCLIDKDADGFITMEELGAVIQSLDVHPTKNEIRDMISEVDVD 60

Query: 61  ANGTLDFDEFLNVMARKMKDNVTEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDD 120
            NGT+DFDEFLNVMARKMKDNVTEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDD
Sbjct: 61  NNGTIDFDEFLNVMARKMKDNVTEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDD 120

Query: 121 EAEQMIREADLDGDGRVSYEEFARIMTIS 150
           EAEQMIREADLDGDGRVSYEEFARIMTIS
Sbjct: 121 EAEQMIREADLDGDGRVSYEEFARIMTIS 149

[Close]

BLAST of Lcy02g018560 vs. TAIR 10
Match: AT4G14640.1 (calmodulin 8 )

HSP 1 Score: 196.8 bits (499), Expect = 1.2e-50
Identity = 96/147 (65.31%), Postives = 127/147 (86.39%), Query Frame = 0


Query: 1   MAAEALTEDQIADFREAFCLIDKDADGFISVEELAAVIQSLDGHPTKNEVRDMISEVDVD 60
           M   ALT+DQI +F+EAFCL DKD DG I+VEELA VI+SLD +PT+ E+ D+I+E+D D
Sbjct: 1   MEETALTKDQITEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEQELHDIITEIDSD 60

Query: 61  ANGTLDFDEFLNVMARKMKD-NVTEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTD 120
           +NGT++F EFLN+MA+K+++ +  EELKEAFKVFD+DQ+GYISA EL +VMINLGE+LTD
Sbjct: 61  SNGTIEFAEFLNLMAKKLQESDAEEELKEAFKVFDKDQNGYISASELSHVMINLGEKLTD 120

Query: 121 DEAEQMIREADLDGDGRVSYEEFARIM 147
           +E EQMI+EADLDGDG+V+Y+EF ++M
Sbjct: 121 EEVEQMIKEADLDGDGQVNYDEFVKMM 147

[Close]

BLAST of Lcy02g018560 vs. TAIR 10
Match: AT3G22930.1 (calmodulin-like 11 )

HSP 1 Score: 195.3 bits (495), Expect = 3.5e-50
Identity = 93/147 (63.27%), Postives = 127/147 (86.39%), Query Frame = 0


Query: 4   EALTEDQIADFREAFCLIDKDADGFISVEELAAVIQSLDGHPTKNEVRDMISEVDVDANG 63
           + LT++QI +F+EAFCL DKD DG I+ +ELA VI+SLD +PT+ E++DMI+E+D D NG
Sbjct: 26  QELTQEQIMEFKEAFCLFDKDGDGCITADELATVIRSLDQNPTEQELQDMITEIDSDGNG 85

Query: 64  TLDFDEFLNVMARKMKD-NVTEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDDEA 123
           T++F EFLN+MA ++++ +  EELKEAFKVFD+DQ+GYISA ELR+VMINLGE+LTD+E 
Sbjct: 86  TIEFSEFLNLMANQLQETDADEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEV 145

Query: 124 EQMIREADLDGDGRVSYEEFARIMTIS 150
           +QMI+EADLDGDG+V+Y+EF R+M I+
Sbjct: 146 DQMIKEADLDGDGQVNYDEFVRMMMIN 172

[Close]

BLAST of Lcy02g018560 vs. TAIR 10
Match: AT3G43810.1 (calmodulin 7 )

HSP 1 Score: 190.7 bits (483), Expect = 8.7e-49
Identity = 92/145 (63.45%), Postives = 124/145 (85.52%), Query Frame = 0


Query: 3   AEALTEDQIADFREAFCLIDKDADGFISVEELAAVIQSLDGHPTKNEVRDMISEVDVDAN 62
           A+ LT+DQI++F+EAF L DKD DG I+ +EL  V++SL  +PT+ E++DMI+EVD D N
Sbjct: 2   ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61

Query: 63  GTLDFDEFLNVMARKMKD-NVTEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDDE 122
           GT+DF EFLN+MARKMKD +  EELKEAF+VFD+DQ+G+ISA ELR+VM NLGE+LTD+E
Sbjct: 62  GTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEE 121

Query: 123 AEQMIREADLDGDGRVSYEEFARIM 147
            ++MIREAD+DGDG+++YEEF ++M
Sbjct: 122 VDEMIREADVDGDGQINYEEFVKVM 146

[Close]

BLAST of Lcy02g018560 vs. TAIR 10
Match: AT1G66410.1 (calmodulin 4 )

HSP 1 Score: 189.5 bits (480), Expect = 1.9e-48
Identity = 92/145 (63.45%), Postives = 124/145 (85.52%), Query Frame = 0


Query: 3   AEALTEDQIADFREAFCLIDKDADGFISVEELAAVIQSLDGHPTKNEVRDMISEVDVDAN 62
           A+ LT++QI++F+EAF L DKD DG I+ +EL  V++SL  +PT+ E++DMI+EVD D N
Sbjct: 2   ADQLTDEQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61

Query: 63  GTLDFDEFLNVMARKMKD-NVTEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDDE 122
           GT+DF EFLN+MA+KMKD +  EELKEAF+VFD+DQ+G+ISA ELR+VM NLGE+LTD+E
Sbjct: 62  GTIDFPEFLNLMAKKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEE 121

Query: 123 AEQMIREADLDGDGRVSYEEFARIM 147
            E+MIREAD+DGDG+++YEEF +IM
Sbjct: 122 VEEMIREADVDGDGQINYEEFVKIM 146

[Close]

BLAST of Lcy02g018560 vs. TAIR 10
Match: AT2G41110.1 (calmodulin 2 )

HSP 1 Score: 189.5 bits (480), Expect = 1.9e-48
Identity = 91/145 (62.76%), Postives = 124/145 (85.52%), Query Frame = 0


Query: 3   AEALTEDQIADFREAFCLIDKDADGFISVEELAAVIQSLDGHPTKNEVRDMISEVDVDAN 62
           A+ LT+DQI++F+EAF L DKD DG I+ +EL  V++SL  +PT+ E++DMI+EVD D N
Sbjct: 2   ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61

Query: 63  GTLDFDEFLNVMARKMKD-NVTEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDDE 122
           GT+DF EFLN+MARKMKD +  EELKEAF+VFD+DQ+G+ISA ELR+VM NLGE+LTD+E
Sbjct: 62  GTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEE 121

Query: 123 AEQMIREADLDGDGRVSYEEFARIM 147
            ++MI+EAD+DGDG+++YEEF ++M
Sbjct: 122 VDEMIKEADVDGDGQINYEEFVKVM 146

The following BLAST results are available for this feature:

BLAST of Lcy02g018560 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23320	1.7e-49	65.31	Calmodulin-like protein 8 OS=Arabidopsis thaliana OX=3702 GN=CML8 PE=1 SV=1	[more]
P27161	3.8e-49	67.59	Calmodulin OS=Solanum lycopersicum OX=4081 GN=CALM1 PE=2 SV=2	[more]
Q9LIK5	5.0e-49	63.27	Calmodulin-like protein 11 OS=Arabidopsis thaliana OX=3702 GN=CML11 PE=2 SV=1	[more]
P27163	6.5e-49	66.90	Calmodulin-2 OS=Petunia hybrida OX=4102 GN=CAM72 PE=2 SV=2	[more]
P13868	1.1e-48	66.90	Calmodulin-1 OS=Solanum tuberosum OX=4113 GN=PCM1 PE=1 SV=2	[more]

BLAST of Lcy02g018560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BL89	5.7e-72	95.97	calmodulin-like OS=Cucumis melo OX=3656 GN=LOC103491266 PE=4 SV=1	[more]
A0A6J1HLH5	9.7e-72	94.63	calmodulin-like OS=Cucurbita moschata OX=3662 GN=LOC111464061 PE=4 SV=1	[more]
A0A5A7UTD2	1.3e-71	95.30	Calmodulin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G0085...	[more]
A0A0A0LLR3	1.3e-71	95.30	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G228380 PE=4 SV=1	[more]
A0A6J1HUX6	1.6e-71	94.63	calmodulin-like OS=Cucurbita maxima OX=3661 GN=LOC111466922 PE=4 SV=1	[more]

BLAST of Lcy02g018560 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888336.1	4.8e-73	96.64	calmodulin-like [Benincasa hispida]	[more]
XP_008449367.1	1.2e-71	95.97	PREDICTED: calmodulin-like [Cucumis melo]	[more]
XP_022963884.1	2.0e-71	94.63	calmodulin-like [Cucurbita moschata] >XP_022963885.1 calmodulin-like [Cucurbita ...	[more]
KAG6571450.1	2.0e-71	94.63	2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic, partial [Cu...	[more]
XP_004145368.1	2.6e-71	95.30	calmodulin [Cucumis sativus] >KGN61702.1 hypothetical protein Csa_006028 [Cucumi...	[more]

BLAST of Lcy02g018560 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G14640.1	1.2e-50	65.31	calmodulin 8	[more]
AT3G22930.1	3.5e-50	63.27	calmodulin-like 11	[more]
AT3G43810.1	8.7e-49	63.45	calmodulin 7	[more]
AT1G66410.1	1.9e-48	63.45	calmodulin 4	[more]
AT2G41110.1	1.9e-48	62.76	calmodulin 2	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00450	RECOVERIN	coord: 99..117 score: 21.86 coord: 77..96 score: 29.23 coord: 53..74 score: 30.77
None	No IPR available	GENE3D	1.10.238.10		coord: 80..149 e-value: 9.9E-27 score: 95.1
None	No IPR available	GENE3D	1.10.238.10		coord: 1..79 e-value: 4.9E-27 score: 96.2
None	No IPR available	PANTHER	PTHR23050:SF211	CALMODULIN-LIKE PROTEIN 9	coord: 3..147
None	No IPR available	PANTHER	PTHR23050	CALCIUM BINDING PROTEIN	coord: 3..147
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 49..77 e-value: 1.9E-6 score: 37.4 coord: 121..149 e-value: 3.3E-6 score: 36.6 coord: 13..41 e-value: 3.8E-6 score: 36.4 coord: 85..113 e-value: 4.3E-7 score: 39.6
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 14..74 e-value: 8.9E-14 score: 51.7 coord: 84..146 e-value: 7.2E-17 score: 61.6
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 9..44 score: 14.90394
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 81..116 score: 15.601326
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 117..149 score: 14.708673
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 45..80 score: 13.258112
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 58..70
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 94..106
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 130..142
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 22..34
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 3..147

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy02g018560.1	Lcy02g018560.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0032440	2-alkenal reductase [NAD(P)+] activity
molecular_function	GO:0005509	calcium ion binding