Lcy02g018440 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy02g018440
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	PRA1 family protein
Location	Chr02: 45590494 .. 45591897 (+)
RNA-Seq Expression	Lcy02g018440
Synteny	Lcy02g018440

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGCCTGGCTCGACCCTCCCATTTCTCTCTCTCTCTCTCTCTCTCTAAAACCCATTTCCTTTCTCTCTCTAAAACCCTCTTGAATTCTCTCCTTGCCGACGCTCGATCGCTGTTGGGATTTTACTGCATCTGCAATGTCCTCTGTTCCGCCATCTTCATATGGCTTCACTGAAACTTCCTCCATTAGAGCCGCCGGAGGTTCGGTTTACGCCACTACACGCCCATGGCGGGAGCTTCTCCAGCCGCTCTCGTCCTTCACTCGCCCTTCATCCGCTGGCGAAGCGACCATTCGCTGTAAGCGCAATCTCAAATACTTTCGTGTTAATTACACTCTCATCGTCCTGCTCGTTGTCTTTCTCAGCCTCCTCTGGCACCCTGTTTCCTTGATTGTGTTCTTGATCGTGTTCGTTGCGTGGTTCTTCCTTTATTTTTACCGGGATGGGCCGTTGGAGGTGTTTAATCGTGTTGTTGATGATCGTGTTGTGCTGGCTGTGCTTGGGTTGGTCACGATTGTCGCCTTGGTGTTGACGGATGTAACGTTGAATGTATTGGTTTCGGTTTTGATTGGGGTTTTTGTTGTTTTGATACACGCCGCCTTTAGGGTTACGGACGATTTGTATATCGACGAGCAAGAAGTCGCCGATGGAGGATTGCTTTCCGTTGTCGGCAGTCCGACTCGTGCAGGATACAGCCGAGTCTAGAGATTTCACTGGTTCATTTTGGCTAGGTTACGAATGATCATCTCGCCTCGTCCGATCCAAGTTCTTCGTGATTTTCCATTGACCGCTTCCTTATTGATCGTGCTGCACAATTCAAAATTCGAATGAGCATAAGAAACCGATCTCTCTCTCGTCGAAACTTGGAAATCCGGTTTGATACATCACTGATTGATTTATCGACGATTTTTTTATGCCCCTTGAATCTCAGGGCTCTGCTTTTTAGTTCTCTCTTATTTGTTCAAAATGTTTGTACATGTAGTTTTAGTTGACGGTAGCGATATACAGAGTTTTGCTAGGTTGAATCCTAGATTTTATCCCGACAATGCTTCTATTTGGGTGTGATTTTCAAGGAAGGGGGTTGCAATGTTTTGGGTTTGGTGTGTTATTTATTTTTGGAAGGAAGAAATGGCCAATACTGGATCTCAATTTTGGTTTTCAGTGTCTTGTTGATGTATACTATCTCTGCCATTTCATGTGGTTTCTGTGGCGTTCTTTCTCTTCATCATGTTGGAAATTTTCTAGGTATACTTCTTGATTCATATAAACTATAATGTCATATAATGTTGACTCTAAATTTAATCCCATCATTGCTCTGAATTGTATGTTGTGGATTTTGATGATTCAAATTGATTGTGAAGAGTAGATACTAGATAGCATTAGATGAGCATTCTCAAATTTTCAGGGA

mRNA sequence

AAGCCTGGCTCGACCCTCCCATTTCTCTCTCTCTCTCTCTCTCTCTAAAACCCATTTCCTTTCTCTCTCTAAAACCCTCTTGAATTCTCTCCTTGCCGACGCTCGATCGCTGTTGGGATTTTACTGCATCTGCAATGTCCTCTGTTCCGCCATCTTCATATGGCTTCACTGAAACTTCCTCCATTAGAGCCGCCGGAGGTTCGGTTTACGCCACTACACGCCCATGGCGGGAGCTTCTCCAGCCGCTCTCGTCCTTCACTCGCCCTTCATCCGCTGGCGAAGCGACCATTCGCTGTAAGCGCAATCTCAAATACTTTCGTGTTAATTACACTCTCATCGTCCTGCTCGTTGTCTTTCTCAGCCTCCTCTGGCACCCTGTTTCCTTGATTGTGTTCTTGATCGTGTTCGTTGCGTGGTTCTTCCTTTATTTTTACCGGGATGGGCCGTTGGAGGTGTTTAATCGTGTTGTTGATGATCGTGTTGTGCTGGCTGTGCTTGGGTTGGTCACGATTGTCGCCTTGGTGTTGACGGATGTAACGTTGAATGTATTGGTTTCGGTTTTGATTGGGGTTTTTGTTGTTTTGATACACGCCGCCTTTAGGGTTACGGACGATTTGTATATCGACGAGCAAGAAGTCGCCGATGGAGGATTGCTTTCCGTTGTCGGCAGTCCGACTCGTGCAGGATACAGCCGAGTCTAGAGATTTCACTGGTTCATTTTGGCTAGGTTACGAATGATCATCTCGCCTCGTCCGATCCAAGTTCTTCGTGATTTTCCATTGACCGCTTCCTTATTGATCGTGCTGCACAATTCAAAATTCGAATGAGCATAAGAAACCGATCTCTCTCTCGTCGAAACTTGGAAATCCGGTTTGATACATCACTGATTGATTTATCGACGATTTTTTTATGCCCCTTGAATCTCAGGGCTCTGCTTTTTAGTTCTCTCTTATTTGTTCAAAATGTTTGTACATGTAGTTTTAGTTGACGGTAGCGATATACAGAGTTTTGCTAGGTTGAATCCTAGATTTTATCCCGACAATGCTTCTATTTGGGTGTGATTTTCAAGGAAGGGGGTTGCAATGTTTTGGGTTTGGTGTGTTATTTATTTTTGGAAGGAAGAAATGGCCAATACTGGATCTCAATTTTGGTTTTCAGTGTCTTGTTGATGTATACTATCTCTGCCATTTCATGTGGTTTCTGTGGCGTTCTTTCTCTTCATCATGTTGGAAATTTTCTAGGTATACTTCTTGATTCATATAAACTATAATGTCATATAATGTTGACTCTAAATTTAATCCCATCATTGCTCTGAATTGTATGTTGTGGATTTTGATGATTCAAATTGATTGTGAAGAGTAGATACTAGATAGCATTAGATGAGCATTCTCAAATTTTCAGGGA

Coding sequence (CDS)

ATGTCCTCTGTTCCGCCATCTTCATATGGCTTCACTGAAACTTCCTCCATTAGAGCCGCCGGAGGTTCGGTTTACGCCACTACACGCCCATGGCGGGAGCTTCTCCAGCCGCTCTCGTCCTTCACTCGCCCTTCATCCGCTGGCGAAGCGACCATTCGCTGTAAGCGCAATCTCAAATACTTTCGTGTTAATTACACTCTCATCGTCCTGCTCGTTGTCTTTCTCAGCCTCCTCTGGCACCCTGTTTCCTTGATTGTGTTCTTGATCGTGTTCGTTGCGTGGTTCTTCCTTTATTTTTACCGGGATGGGCCGTTGGAGGTGTTTAATCGTGTTGTTGATGATCGTGTTGTGCTGGCTGTGCTTGGGTTGGTCACGATTGTCGCCTTGGTGTTGACGGATGTAACGTTGAATGTATTGGTTTCGGTTTTGATTGGGGTTTTTGTTGTTTTGATACACGCCGCCTTTAGGGTTACGGACGATTTGTATATCGACGAGCAAGAAGTCGCCGATGGAGGATTGCTTTCCGTTGTCGGCAGTCCGACTCGTGCAGGATACAGCCGAGTCTAG

Protein sequence

MSSVPPSSYGFTETSSIRAAGGSVYATTRPWRELLQPLSSFTRPSSAGEATIRCKRNLKYFRVNYTLIVLLVVFLSLLWHPVSLIVFLIVFVAWFFLYFYRDGPLEVFNRVVDDRVVLAVLGLVTIVALVLTDVTLNVLVSVLIGVFVVLIHAAFRVTDDLYIDEQEVADGGLLSVVGSPTRAGYSRV

Homology

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BLAST of Lcy02g018440 vs. ExPASy Swiss-Prot
Match: Q9FRR1 (PRA1 family protein E OS=Arabidopsis thaliana OX=3702 GN=PRA1E PE=1 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.0e-30
Identity = 80/162 (49.38%), Postives = 109/162 (67.28%), Query Frame = 0


Query: 23  SVYATTRPWRELLQPLSSFTRPSSAGEATIRCKRNLKYFRVNYTLIVLLVVFLSLLWHPV 82
           S+  T RPWRE+L  LS+ + P    EA    K N+ YFR NY L VL +VFL L++HP+
Sbjct: 42  SMITTLRPWREILD-LSALSLPRGYDEAMAHLKHNISYFRGNYALAVLAIVFLGLIYHPM 101

Query: 83  SLIVFLIVFVAWFFLYFYRDG--PLEVFNRVVDDRVVLAVLGLVTIVALVLTDVTLNVLV 142
           S+I F++VF+ W  LYF RD    + +  + VDD++VL +L LVT++ALV TDV  NVLV
Sbjct: 102 SMIAFIVVFIGWILLYFSRDANDSIVISGKEVDDKIVLVLLSLVTVLALVYTDVGENVLV 161

Query: 143 SVLIGVFVVLIHAAFRVTDDLYIDEQEVADGGLLSVVGSPTR 183
           S++IG+ +V  H AFR TDDL++DE+    GGL+S  GS  R
Sbjct: 162 SLIIGLLIVGAHGAFRNTDDLFLDEESARRGGLVS-AGSGNR 201

[Close]

BLAST of Lcy02g018440 vs. ExPASy Swiss-Prot
Match: Q9LIC6 (PRA1 family protein F3 OS=Arabidopsis thaliana OX=3702 GN=PRA1F3 PE=1 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 4.0e-27
Identity = 66/141 (46.81%), Postives = 96/141 (68.09%), Query Frame = 0


Query: 26  ATTRPWRELLQPLSSFTRPSSAGEATIRCKRNLKYFRVNYTLIVLLVVFLSLLWHPVSLI 85
           AT R WR +     S   P    +A  R K NL YFR+NY ++VL+V+F SL+WHP SLI
Sbjct: 34  ATRRAWRVMFD-FHSMGLPHGVSDAFTRIKTNLAYFRMNYAIVVLIVIFFSLIWHPTSLI 93

Query: 86  VFLIVFVAWFFLYFYRDGPLEVFNRVVDDRVVLAVLGLVTIVALVLTDVTLNVLVSVLIG 145
           VF ++ V W FLYF RD P+++F   +DDR VL VL ++T+V L+LT+ T N++ +++ G
Sbjct: 94  VFTVLVVVWIFLYFLRDEPIKLFRFQIDDRTVLIVLSVLTVVLLLLTNATFNIVGALVTG 153

Query: 146 VFVVLIHAAFRVTDDLYIDEQ 167
             +VLIH+  R T+DL++DE+
Sbjct: 154 AVLVLIHSVVRKTEDLFLDEE 173

[Close]

BLAST of Lcy02g018440 vs. ExPASy Swiss-Prot
Match: Q9FZ63 (PRA1 family protein F1 OS=Arabidopsis thaliana OX=3702 GN=PRA1F1 PE=1 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 9.8e-26
Identity = 69/156 (44.23%), Postives = 97/156 (62.18%), Query Frame = 0


Query: 14  TSSIRAAGGSVYATTRPWRELLQPLSSFTRPSSAGEATIRCKRNLKYFRVNYTLIVLLVV 73
           T  I     S  AT RPW+++L  L SF  P        R + N  YF+ NYT++VL  V
Sbjct: 22  TRGINQHKRSGLATRRPWKQMLD-LGSFNFPRKLATVITRIRANTVYFQTNYTIVVLFSV 81

Query: 74  FLSLLWHPVSLIVFLIVFVAWFFLYFYRDGPLEVFNRVVDDRVVLAVLGLVTIVALVLTD 133
           FLSL+W+P SL+V L +  AW FLYF RD PL VF+R +D R+VL ++ ++T+  L LTD
Sbjct: 82  FLSLIWNPFSLLVLLALLGAWLFLYFLRDEPLTVFDREIDHRIVLIIMSVITLSILFLTD 141

Query: 134 VTLNVLVSVLIGVFVVLIHAAFRVTDDLYIDEQEVA 170
             LN+ V+++ G   VL HAA R T+DL+  ++E +
Sbjct: 142 AKLNIAVAIVAGALAVLSHAAVRKTEDLFQTDEETS 176

[Close]

BLAST of Lcy02g018440 vs. ExPASy Swiss-Prot
Match: Q9LIC7 (PRA1 family protein F4 OS=Arabidopsis thaliana OX=3702 GN=PRA1F4 PE=2 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.3e-25
Identity = 68/141 (48.23%), Postives = 91/141 (64.54%), Query Frame = 0


Query: 26  ATTRPWRELLQPLSSFTRPSSAGEATIRCKRNLKYFRVNYTLIVLLVVFLSLLWHPVSLI 85
           AT R WR +   L S   P    +   R K NL YFR NY +++L V+F SL+WHP SLI
Sbjct: 34  ATRRSWRVMFD-LHSTGLPHGVSDVFSRIKTNLAYFRSNYAIVILNVIFFSLIWHPTSLI 93

Query: 86  VFLIVFVAWFFLYFYRDGPLEVFNRVVDDRVVLAVLGLVTIVALVLTDVTLNVLVSVLIG 145
           VF  +   W FLYF RD PL+VF   +DDR VL  L ++TIV L+LT+ T N++ +++ G
Sbjct: 94  VFTGLVFLWIFLYFLRDVPLKVFRFQIDDRAVLIGLSVITIVLLLLTNATFNIVAALMAG 153

Query: 146 VFVVLIHAAFRVTDDLYIDEQ 167
             +VLIHA  R TDDL++DE+
Sbjct: 154 AVLVLIHAVIRKTDDLFLDEE 173

[Close]

BLAST of Lcy02g018440 vs. ExPASy Swiss-Prot
Match: Q9C889 (PRA1 family protein F2 OS=Arabidopsis thaliana OX=3702 GN=PRA1F2 PE=1 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 2.2e-25
Identity = 76/157 (48.41%), Postives = 98/157 (62.42%), Query Frame = 0


Query: 26  ATTRPWRELLQPLSSFTRPSSAGEATIRCKRNLKYFRVNYTLIVLLVVFLSLLWHPVSLI 85
           AT RPW+ +     S T P    +A  R K NL YFR NY + VL ++FLSLL+HP SLI
Sbjct: 34  ATRRPWKSMFD-FESMTLPHGFFDAISRIKTNLGYFRANYAIGVLFILFLSLLYHPTSLI 93

Query: 86  VFLIVFVAWFFLYFYRDGPLEVFNRVVDDRVVLAVLGLVTIVALVLTDVTLNVLVSVLIG 145
           V  I+ V W FLYF RD PL VF   +DDR VL  L ++T+V L+LT  T N+L S+L  
Sbjct: 94  VLSILVVFWIFLYFLRDEPLVVFGYQIDDRTVLIGLSVLTVVMLLLTHATSNILGSLLTA 153

Query: 146 VFVVLIHAAFRVTDDLYIDEQEVA---DGGLLSVVGS 180
             +VLIHAA R +D+L++DE+  A     GL+S   S
Sbjct: 154 AVLVLIHAAVRRSDNLFLDEEAAAVTEASGLMSYPSS 189

[Close]

BLAST of Lcy02g018440 vs. ExPASy TrEMBL
Match: A0A0A0LKV0 (PRA1 family protein OS=Cucumis sativus OX=3659 GN=Csa_2G224290 PE=3 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 2.0e-74
Identity = 158/191 (82.72%), Postives = 171/191 (89.53%), Query Frame = 0


Query: 1   MSSVPPSSYGFTETSSI---RAAGGSVYATTRPWRELLQPLSSFTRPSSAGEATIRCKRN 60
           MSS  PS YGFTETS +   RAA  S+YAT RPWRELLQPLSSFTRPSS GEA IRCKRN
Sbjct: 1   MSSNQPSPYGFTETSILSRARAASDSLYATLRPWRELLQPLSSFTRPSSVGEAIIRCKRN 60

Query: 61  LKYFRVNYTLIVLLVVFLSLLWHPVSLIVFLIVFVAWFFLYFYRDGPLEVFNRVVDDRVV 120
           LKYFRVNYT IVLL++FLSLLWHPVSLIVFLIVFVAWFFLYF+RD PLEVF+RVVDDRVV
Sbjct: 61  LKYFRVNYTFIVLLILFLSLLWHPVSLIVFLIVFVAWFFLYFFRDEPLEVFHRVVDDRVV 120

Query: 121 LAVLGLVTIVALVLTDVTLNVLVSVLIGVFVVLIHAAFRVTDDLYIDEQEVADGGLLSVV 180
           L +LG+VTI ALVLTDV+LNVL+S+LIGVF+VLIHA  RVTDDLYIDEQEVADGGLLSVV
Sbjct: 121 LVLLGIVTIFALVLTDVSLNVLISILIGVFLVLIHAGSRVTDDLYIDEQEVADGGLLSVV 180

Query: 181 GSPTRAGYSRV 189
           GSPTR  YSR+
Sbjct: 181 GSPTRTEYSRI 191

[Close]

BLAST of Lcy02g018440 vs. ExPASy TrEMBL
Match: A0A5A7UNI5 (PRA1 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G001030 PE=3 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 4.5e-74
Identity = 157/191 (82.20%), Postives = 170/191 (89.01%), Query Frame = 0


Query: 1   MSSVPPSSYGFTETSSI---RAAGGSVYATTRPWRELLQPLSSFTRPSSAGEATIRCKRN 60
           MSS  P  YGFTETS +   RAA  SVYAT RPWRELLQPLSSFTRPSS GEA IRCKRN
Sbjct: 1   MSSNQPYPYGFTETSILSRARAASDSVYATLRPWRELLQPLSSFTRPSSVGEAIIRCKRN 60

Query: 61  LKYFRVNYTLIVLLVVFLSLLWHPVSLIVFLIVFVAWFFLYFYRDGPLEVFNRVVDDRVV 120
           LKYFRVNYT IVLL++FLSLLWHPVSLIVFL+VFVAWFFLYF+RD PLEVFNRVVDDRVV
Sbjct: 61  LKYFRVNYTFIVLLILFLSLLWHPVSLIVFLVVFVAWFFLYFFRDEPLEVFNRVVDDRVV 120

Query: 121 LAVLGLVTIVALVLTDVTLNVLVSVLIGVFVVLIHAAFRVTDDLYIDEQEVADGGLLSVV 180
           L +LG+VTI ALVLTDV+LNVLVS+LIGVF+VL+HA  RV+DDLYIDEQEVADGGLLSVV
Sbjct: 121 LVLLGIVTIFALVLTDVSLNVLVSILIGVFLVLVHAGSRVSDDLYIDEQEVADGGLLSVV 180

Query: 181 GSPTRAGYSRV 189
           GSPTR  YSR+
Sbjct: 181 GSPTRTEYSRI 191

[Close]

BLAST of Lcy02g018440 vs. ExPASy TrEMBL
Match: A0A6J1CVS9 (PRA1 family protein OS=Momordica charantia OX=3673 GN=LOC111015242 PE=3 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 4.5e-74
Identity = 157/191 (82.20%), Postives = 171/191 (89.53%), Query Frame = 0


Query: 1   MSSVPPSSYGFTETSSIRAAG---GSVYATTRPWRELLQPLSSFTRPSSAGEATIRCKRN 60
           MSS  P  YGFTETS +  AG   GSVY + RPWR+L QPLSSFTRP+S GEATIR KRN
Sbjct: 1   MSSASPPPYGFTETSFLSRAGAASGSVYGSLRPWRQLFQPLSSFTRPASVGEATIRSKRN 60

Query: 61  LKYFRVNYTLIVLLVVFLSLLWHPVSLIVFLIVFVAWFFLYFYRDGPLEVFNRVVDDRVV 120
           LKYFRVNYT IVLL++FLSLLWHPVSLIVFLIVFVAWFFLYF RD PLEVFNRV+DDRVV
Sbjct: 61  LKYFRVNYTFIVLLILFLSLLWHPVSLIVFLIVFVAWFFLYFSRDEPLEVFNRVLDDRVV 120

Query: 121 LAVLGLVTIVALVLTDVTLNVLVSVLIGVFVVLIHAAFRVTDDLYIDEQEVADGGLLSVV 180
           LAVLGLVTIVALVLTDV+LNV VS+LIGVF+V +HAAFRVT+DLY+DEQEVADGGL+SVV
Sbjct: 121 LAVLGLVTIVALVLTDVSLNVFVSILIGVFLVSLHAAFRVTEDLYMDEQEVADGGLISVV 180

Query: 181 GSPTRAGYSRV 189
           GSPTRAGYSRV
Sbjct: 181 GSPTRAGYSRV 191

[Close]

BLAST of Lcy02g018440 vs. ExPASy TrEMBL
Match: A0A1S3BMR2 (PRA1 family protein OS=Cucumis melo OX=3656 GN=LOC103491252 PE=3 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 4.5e-74
Identity = 157/191 (82.20%), Postives = 170/191 (89.01%), Query Frame = 0


Query: 1   MSSVPPSSYGFTETSSI---RAAGGSVYATTRPWRELLQPLSSFTRPSSAGEATIRCKRN 60
           MSS  P  YGFTETS +   RAA  SVYAT RPWRELLQPLSSFTRPSS GEA IRCKRN
Sbjct: 1   MSSNQPYPYGFTETSILSRARAASDSVYATLRPWRELLQPLSSFTRPSSVGEAIIRCKRN 60

Query: 61  LKYFRVNYTLIVLLVVFLSLLWHPVSLIVFLIVFVAWFFLYFYRDGPLEVFNRVVDDRVV 120
           LKYFRVNYT IVLL++FLSLLWHPVSLIVFL+VFVAWFFLYF+RD PLEVFNRVVDDRVV
Sbjct: 61  LKYFRVNYTFIVLLILFLSLLWHPVSLIVFLVVFVAWFFLYFFRDEPLEVFNRVVDDRVV 120

Query: 121 LAVLGLVTIVALVLTDVTLNVLVSVLIGVFVVLIHAAFRVTDDLYIDEQEVADGGLLSVV 180
           L +LG+VTI ALVLTDV+LNVLVS+LIGVF+VL+HA  RV+DDLYIDEQEVADGGLLSVV
Sbjct: 121 LVLLGIVTIFALVLTDVSLNVLVSILIGVFLVLVHAGSRVSDDLYIDEQEVADGGLLSVV 180

Query: 181 GSPTRAGYSRV 189
           GSPTR  YSR+
Sbjct: 181 GSPTRTEYSRI 191

[Close]

BLAST of Lcy02g018440 vs. ExPASy TrEMBL
Match: A0A6J1EWX4 (PRA1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111437276 PE=3 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 2.2e-73
Identity = 155/188 (82.45%), Postives = 169/188 (89.89%), Query Frame = 0


Query: 1   MSSVPPSSYGFTETSSIRAAGGSVYATTRPWRELLQPLSSFTRPSSAGEATIRCKRNLKY 60
           MS+V PS Y FTETS +     S YAT RPWRELLQPLSSFTRPSS GEA+IRCKRNLKY
Sbjct: 1   MSTVHPSPYAFTETSIL--TSDSAYATLRPWRELLQPLSSFTRPSSLGEASIRCKRNLKY 60

Query: 61  FRVNYTLIVLLVVFLSLLWHPVSLIVFLIVFVAWFFLYFYRDGPLEVFNRVVDDRVVLAV 120
           FR NYTL+VLL++F SLLWHPVSLIVFLIVFVAWFFLYF+RD PLE+F+RVVDDRVVLAV
Sbjct: 61  FRSNYTLVVLLILFFSLLWHPVSLIVFLIVFVAWFFLYFFRDQPLELFHRVVDDRVVLAV 120

Query: 121 LGLVTIVALVLTDVTLNVLVSVLIGVFVVLIHAAFRVTDDLYIDEQEVADGGLLSVVGSP 180
           LGLVTIV LVLTDV+ NVL+S+LIGVF+VL HAAFRVT+DLYIDEQEVADGGLLSVVGSP
Sbjct: 121 LGLVTIVVLVLTDVSFNVLLSILIGVFLVLTHAAFRVTEDLYIDEQEVADGGLLSVVGSP 180

Query: 181 TRAGYSRV 189
           TR GYSRV
Sbjct: 181 TRTGYSRV 186

[Close]

BLAST of Lcy02g018440 vs. NCBI nr
Match: XP_038887336.1 (PRA1 family protein E-like [Benincasa hispida])

HSP 1 Score: 306.2 bits (783), Expect = 1.9e-79
Identity = 168/191 (87.96%), Postives = 176/191 (92.15%), Query Frame = 0


Query: 1   MSSVPPSSYGFTETSSI---RAAGGSVYATTRPWRELLQPLSSFTRPSSAGEATIRCKRN 60
           MSSV PS YGFTETS +   RAA  SVYAT RPWRELLQPLSSFTRPSS GEATIRCKRN
Sbjct: 1   MSSVQPSPYGFTETSILSRARAASDSVYATLRPWRELLQPLSSFTRPSSIGEATIRCKRN 60

Query: 61  LKYFRVNYTLIVLLVVFLSLLWHPVSLIVFLIVFVAWFFLYFYRDGPLEVFNRVVDDRVV 120
           LKYFRVNYT IVLL++F SLLWHPVSLIVFLIVFVAWFFLYF+RD PLEVFNRVVDDRVV
Sbjct: 61  LKYFRVNYTFIVLLILFFSLLWHPVSLIVFLIVFVAWFFLYFFRDEPLEVFNRVVDDRVV 120

Query: 121 LAVLGLVTIVALVLTDVTLNVLVSVLIGVFVVLIHAAFRVTDDLYIDEQEVADGGLLSVV 180
           LA+LGLVTIVALVLTDV LNVLVS+LIGVF+VLIHAAFRVTDDLYIDEQEVADGGLLSVV
Sbjct: 121 LALLGLVTIVALVLTDVLLNVLVSILIGVFLVLIHAAFRVTDDLYIDEQEVADGGLLSVV 180

Query: 181 GSPTRAGYSRV 189
           GSPTR GYSR+
Sbjct: 181 GSPTRTGYSRI 191

[Close]

BLAST of Lcy02g018440 vs. NCBI nr
Match: XP_004145378.1 (PRA1 family protein E [Cucumis sativus] >KGN61689.1 hypothetical protein Csa_006382 [Cucumis sativus])

HSP 1 Score: 288.5 bits (737), Expect = 4.2e-74
Identity = 158/191 (82.72%), Postives = 171/191 (89.53%), Query Frame = 0


Query: 1   MSSVPPSSYGFTETSSI---RAAGGSVYATTRPWRELLQPLSSFTRPSSAGEATIRCKRN 60
           MSS  PS YGFTETS +   RAA  S+YAT RPWRELLQPLSSFTRPSS GEA IRCKRN
Sbjct: 1   MSSNQPSPYGFTETSILSRARAASDSLYATLRPWRELLQPLSSFTRPSSVGEAIIRCKRN 60

Query: 61  LKYFRVNYTLIVLLVVFLSLLWHPVSLIVFLIVFVAWFFLYFYRDGPLEVFNRVVDDRVV 120
           LKYFRVNYT IVLL++FLSLLWHPVSLIVFLIVFVAWFFLYF+RD PLEVF+RVVDDRVV
Sbjct: 61  LKYFRVNYTFIVLLILFLSLLWHPVSLIVFLIVFVAWFFLYFFRDEPLEVFHRVVDDRVV 120

Query: 121 LAVLGLVTIVALVLTDVTLNVLVSVLIGVFVVLIHAAFRVTDDLYIDEQEVADGGLLSVV 180
           L +LG+VTI ALVLTDV+LNVL+S+LIGVF+VLIHA  RVTDDLYIDEQEVADGGLLSVV
Sbjct: 121 LVLLGIVTIFALVLTDVSLNVLISILIGVFLVLIHAGSRVTDDLYIDEQEVADGGLLSVV 180

Query: 181 GSPTRAGYSRV 189
           GSPTR  YSR+
Sbjct: 181 GSPTRTEYSRI 191

[Close]

BLAST of Lcy02g018440 vs. NCBI nr
Match: XP_023533638.1 (PRA1 family protein E-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 287.7 bits (735), Expect = 7.1e-74
Identity = 156/188 (82.98%), Postives = 171/188 (90.96%), Query Frame = 0


Query: 1   MSSVPPSSYGFTETSSIRAAGGSVYATTRPWRELLQPLSSFTRPSSAGEATIRCKRNLKY 60
           MS+V PS Y FTETS +  A  S YAT RPWRELLQPLSSFTRPSS GEA+IRCKRNLKY
Sbjct: 1   MSTVHPSPYAFTETSIL--ASDSAYATLRPWRELLQPLSSFTRPSSLGEASIRCKRNLKY 60

Query: 61  FRVNYTLIVLLVVFLSLLWHPVSLIVFLIVFVAWFFLYFYRDGPLEVFNRVVDDRVVLAV 120
           FR NYTL++LL++F SLLWHPVSLIVFLIVFVAWFFLYF+RD PLE+F+RVVDDRVVLAV
Sbjct: 61  FRANYTLVLLLILFFSLLWHPVSLIVFLIVFVAWFFLYFFRDQPLELFHRVVDDRVVLAV 120

Query: 121 LGLVTIVALVLTDVTLNVLVSVLIGVFVVLIHAAFRVTDDLYIDEQEVADGGLLSVVGSP 180
           LGLVTIV LVLTDV+LNVL+S+LIGVF+VL HAAFRVT+DLYIDEQEVADGGLLSVVGSP
Sbjct: 121 LGLVTIVVLVLTDVSLNVLLSILIGVFLVLTHAAFRVTEDLYIDEQEVADGGLLSVVGSP 180

Query: 181 TRAGYSRV 189
           TR GYSRV
Sbjct: 181 TRTGYSRV 186

[Close]

BLAST of Lcy02g018440 vs. NCBI nr
Match: XP_022145895.1 (PRA1 family protein E-like [Momordica charantia])

HSP 1 Score: 287.3 bits (734), Expect = 9.3e-74
Identity = 157/191 (82.20%), Postives = 171/191 (89.53%), Query Frame = 0


Query: 1   MSSVPPSSYGFTETSSIRAAG---GSVYATTRPWRELLQPLSSFTRPSSAGEATIRCKRN 60
           MSS  P  YGFTETS +  AG   GSVY + RPWR+L QPLSSFTRP+S GEATIR KRN
Sbjct: 1   MSSASPPPYGFTETSFLSRAGAASGSVYGSLRPWRQLFQPLSSFTRPASVGEATIRSKRN 60

Query: 61  LKYFRVNYTLIVLLVVFLSLLWHPVSLIVFLIVFVAWFFLYFYRDGPLEVFNRVVDDRVV 120
           LKYFRVNYT IVLL++FLSLLWHPVSLIVFLIVFVAWFFLYF RD PLEVFNRV+DDRVV
Sbjct: 61  LKYFRVNYTFIVLLILFLSLLWHPVSLIVFLIVFVAWFFLYFSRDEPLEVFNRVLDDRVV 120

Query: 121 LAVLGLVTIVALVLTDVTLNVLVSVLIGVFVVLIHAAFRVTDDLYIDEQEVADGGLLSVV 180
           LAVLGLVTIVALVLTDV+LNV VS+LIGVF+V +HAAFRVT+DLY+DEQEVADGGL+SVV
Sbjct: 121 LAVLGLVTIVALVLTDVSLNVFVSILIGVFLVSLHAAFRVTEDLYMDEQEVADGGLISVV 180

Query: 181 GSPTRAGYSRV 189
           GSPTRAGYSRV
Sbjct: 181 GSPTRAGYSRV 191

[Close]

BLAST of Lcy02g018440 vs. NCBI nr
Match: XP_008449347.1 (PREDICTED: PRA1 family protein E-like [Cucumis melo] >KAA0057422.1 PRA1 family protein E-like [Cucumis melo var. makuwa] >TYK30121.1 PRA1 family protein E-like [Cucumis melo var. makuwa])

HSP 1 Score: 287.3 bits (734), Expect = 9.3e-74
Identity = 157/191 (82.20%), Postives = 170/191 (89.01%), Query Frame = 0


Query: 1   MSSVPPSSYGFTETSSI---RAAGGSVYATTRPWRELLQPLSSFTRPSSAGEATIRCKRN 60
           MSS  P  YGFTETS +   RAA  SVYAT RPWRELLQPLSSFTRPSS GEA IRCKRN
Sbjct: 1   MSSNQPYPYGFTETSILSRARAASDSVYATLRPWRELLQPLSSFTRPSSVGEAIIRCKRN 60

Query: 61  LKYFRVNYTLIVLLVVFLSLLWHPVSLIVFLIVFVAWFFLYFYRDGPLEVFNRVVDDRVV 120
           LKYFRVNYT IVLL++FLSLLWHPVSLIVFL+VFVAWFFLYF+RD PLEVFNRVVDDRVV
Sbjct: 61  LKYFRVNYTFIVLLILFLSLLWHPVSLIVFLVVFVAWFFLYFFRDEPLEVFNRVVDDRVV 120

Query: 121 LAVLGLVTIVALVLTDVTLNVLVSVLIGVFVVLIHAAFRVTDDLYIDEQEVADGGLLSVV 180
           L +LG+VTI ALVLTDV+LNVLVS+LIGVF+VL+HA  RV+DDLYIDEQEVADGGLLSVV
Sbjct: 121 LVLLGIVTIFALVLTDVSLNVLVSILIGVFLVLVHAGSRVSDDLYIDEQEVADGGLLSVV 180

Query: 181 GSPTRAGYSRV 189
           GSPTR  YSR+
Sbjct: 181 GSPTRTEYSRI 191

[Close]

BLAST of Lcy02g018440 vs. TAIR 10
Match: AT1G08770.1 (prenylated RAB acceptor 1.E )

HSP 1 Score: 134.8 bits (338), Expect = 7.2e-32
Identity = 80/162 (49.38%), Postives = 109/162 (67.28%), Query Frame = 0


Query: 23  SVYATTRPWRELLQPLSSFTRPSSAGEATIRCKRNLKYFRVNYTLIVLLVVFLSLLWHPV 82
           S+  T RPWRE+L  LS+ + P    EA    K N+ YFR NY L VL +VFL L++HP+
Sbjct: 42  SMITTLRPWREILD-LSALSLPRGYDEAMAHLKHNISYFRGNYALAVLAIVFLGLIYHPM 101

Query: 83  SLIVFLIVFVAWFFLYFYRDG--PLEVFNRVVDDRVVLAVLGLVTIVALVLTDVTLNVLV 142
           S+I F++VF+ W  LYF RD    + +  + VDD++VL +L LVT++ALV TDV  NVLV
Sbjct: 102 SMIAFIVVFIGWILLYFSRDANDSIVISGKEVDDKIVLVLLSLVTVLALVYTDVGENVLV 161

Query: 143 SVLIGVFVVLIHAAFRVTDDLYIDEQEVADGGLLSVVGSPTR 183
           S++IG+ +V  H AFR TDDL++DE+    GGL+S  GS  R
Sbjct: 162 SLIIGLLIVGAHGAFRNTDDLFLDEESARRGGLVS-AGSGNR 201

[Close]

BLAST of Lcy02g018440 vs. TAIR 10
Match: AT3G13720.1 (PRA1 (Prenylated rab acceptor) family protein )

HSP 1 Score: 122.9 bits (307), Expect = 2.8e-28
Identity = 66/141 (46.81%), Postives = 96/141 (68.09%), Query Frame = 0


Query: 26  ATTRPWRELLQPLSSFTRPSSAGEATIRCKRNLKYFRVNYTLIVLLVVFLSLLWHPVSLI 85
           AT R WR +     S   P    +A  R K NL YFR+NY ++VL+V+F SL+WHP SLI
Sbjct: 34  ATRRAWRVMFD-FHSMGLPHGVSDAFTRIKTNLAYFRMNYAIVVLIVIFFSLIWHPTSLI 93

Query: 86  VFLIVFVAWFFLYFYRDGPLEVFNRVVDDRVVLAVLGLVTIVALVLTDVTLNVLVSVLIG 145
           VF ++ V W FLYF RD P+++F   +DDR VL VL ++T+V L+LT+ T N++ +++ G
Sbjct: 94  VFTVLVVVWIFLYFLRDEPIKLFRFQIDDRTVLIVLSVLTVVLLLLTNATFNIVGALVTG 153

Query: 146 VFVVLIHAAFRVTDDLYIDEQ 167
             +VLIH+  R T+DL++DE+
Sbjct: 154 AVLVLIHSVVRKTEDLFLDEE 173

[Close]

BLAST of Lcy02g018440 vs. TAIR 10
Match: AT1G17700.1 (prenylated RAB acceptor 1.F1 )

HSP 1 Score: 118.2 bits (295), Expect = 6.9e-27
Identity = 69/156 (44.23%), Postives = 97/156 (62.18%), Query Frame = 0


Query: 14  TSSIRAAGGSVYATTRPWRELLQPLSSFTRPSSAGEATIRCKRNLKYFRVNYTLIVLLVV 73
           T  I     S  AT RPW+++L  L SF  P        R + N  YF+ NYT++VL  V
Sbjct: 22  TRGINQHKRSGLATRRPWKQMLD-LGSFNFPRKLATVITRIRANTVYFQTNYTIVVLFSV 81

Query: 74  FLSLLWHPVSLIVFLIVFVAWFFLYFYRDGPLEVFNRVVDDRVVLAVLGLVTIVALVLTD 133
           FLSL+W+P SL+V L +  AW FLYF RD PL VF+R +D R+VL ++ ++T+  L LTD
Sbjct: 82  FLSLIWNPFSLLVLLALLGAWLFLYFLRDEPLTVFDREIDHRIVLIIMSVITLSILFLTD 141

Query: 134 VTLNVLVSVLIGVFVVLIHAAFRVTDDLYIDEQEVA 170
             LN+ V+++ G   VL HAA R T+DL+  ++E +
Sbjct: 142 AKLNIAVAIVAGALAVLSHAAVRKTEDLFQTDEETS 176

[Close]

BLAST of Lcy02g018440 vs. TAIR 10
Match: AT3G13710.1 (prenylated RAB acceptor 1.F4 )

HSP 1 Score: 117.9 bits (294), Expect = 9.0e-27
Identity = 68/141 (48.23%), Postives = 91/141 (64.54%), Query Frame = 0


Query: 26  ATTRPWRELLQPLSSFTRPSSAGEATIRCKRNLKYFRVNYTLIVLLVVFLSLLWHPVSLI 85
           AT R WR +   L S   P    +   R K NL YFR NY +++L V+F SL+WHP SLI
Sbjct: 34  ATRRSWRVMFD-LHSTGLPHGVSDVFSRIKTNLAYFRSNYAIVILNVIFFSLIWHPTSLI 93

Query: 86  VFLIVFVAWFFLYFYRDGPLEVFNRVVDDRVVLAVLGLVTIVALVLTDVTLNVLVSVLIG 145
           VF  +   W FLYF RD PL+VF   +DDR VL  L ++TIV L+LT+ T N++ +++ G
Sbjct: 94  VFTGLVFLWIFLYFLRDVPLKVFRFQIDDRAVLIGLSVITIVLLLLTNATFNIVAALMAG 153

Query: 146 VFVVLIHAAFRVTDDLYIDEQ 167
             +VLIHA  R TDDL++DE+
Sbjct: 154 AVLVLIHAVIRKTDDLFLDEE 173

[Close]

BLAST of Lcy02g018440 vs. TAIR 10
Match: AT1G55190.1 (PRA1 (Prenylated rab acceptor) family protein )

HSP 1 Score: 117.1 bits (292), Expect = 1.5e-26
Identity = 76/157 (48.41%), Postives = 98/157 (62.42%), Query Frame = 0


Query: 26  ATTRPWRELLQPLSSFTRPSSAGEATIRCKRNLKYFRVNYTLIVLLVVFLSLLWHPVSLI 85
           AT RPW+ +     S T P    +A  R K NL YFR NY + VL ++FLSLL+HP SLI
Sbjct: 34  ATRRPWKSMFD-FESMTLPHGFFDAISRIKTNLGYFRANYAIGVLFILFLSLLYHPTSLI 93

Query: 86  VFLIVFVAWFFLYFYRDGPLEVFNRVVDDRVVLAVLGLVTIVALVLTDVTLNVLVSVLIG 145
           V  I+ V W FLYF RD PL VF   +DDR VL  L ++T+V L+LT  T N+L S+L  
Sbjct: 94  VLSILVVFWIFLYFLRDEPLVVFGYQIDDRTVLIGLSVLTVVMLLLTHATSNILGSLLTA 153

Query: 146 VFVVLIHAAFRVTDDLYIDEQEVA---DGGLLSVVGS 180
             +VLIHAA R +D+L++DE+  A     GL+S   S
Sbjct: 154 AVLVLIHAAVRRSDNLFLDEEAAAVTEASGLMSYPSS 189

The following BLAST results are available for this feature:

BLAST of Lcy02g018440 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FRR1	1.0e-30	49.38	PRA1 family protein E OS=Arabidopsis thaliana OX=3702 GN=PRA1E PE=1 SV=1	[more]
Q9LIC6	4.0e-27	46.81	PRA1 family protein F3 OS=Arabidopsis thaliana OX=3702 GN=PRA1F3 PE=1 SV=1	[more]
Q9FZ63	9.8e-26	44.23	PRA1 family protein F1 OS=Arabidopsis thaliana OX=3702 GN=PRA1F1 PE=1 SV=1	[more]
Q9LIC7	1.3e-25	48.23	PRA1 family protein F4 OS=Arabidopsis thaliana OX=3702 GN=PRA1F4 PE=2 SV=1	[more]
Q9C889	2.2e-25	48.41	PRA1 family protein F2 OS=Arabidopsis thaliana OX=3702 GN=PRA1F2 PE=1 SV=1	[more]

BLAST of Lcy02g018440 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LKV0	2.0e-74	82.72	PRA1 family protein OS=Cucumis sativus OX=3659 GN=Csa_2G224290 PE=3 SV=1	[more]
A0A5A7UNI5	4.5e-74	82.20	PRA1 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G...	[more]
A0A6J1CVS9	4.5e-74	82.20	PRA1 family protein OS=Momordica charantia OX=3673 GN=LOC111015242 PE=3 SV=1	[more]
A0A1S3BMR2	4.5e-74	82.20	PRA1 family protein OS=Cucumis melo OX=3656 GN=LOC103491252 PE=3 SV=1	[more]
A0A6J1EWX4	2.2e-73	82.45	PRA1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111437276 PE=3 SV=1	[more]

BLAST of Lcy02g018440 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038887336.1	1.9e-79	87.96	PRA1 family protein E-like [Benincasa hispida]	[more]
XP_004145378.1	4.2e-74	82.72	PRA1 family protein E [Cucumis sativus] >KGN61689.1 hypothetical protein Csa_006...	[more]
XP_023533638.1	7.1e-74	82.98	PRA1 family protein E-like [Cucurbita pepo subsp. pepo]	[more]
XP_022145895.1	9.3e-74	82.20	PRA1 family protein E-like [Momordica charantia]	[more]
XP_008449347.1	9.3e-74	82.20	PREDICTED: PRA1 family protein E-like [Cucumis melo] >KAA0057422.1 PRA1 family p...	[more]

BLAST of Lcy02g018440 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G08770.1	7.2e-32	49.38	prenylated RAB acceptor 1.E	[more]
AT3G13720.1	2.8e-28	46.81	PRA1 (Prenylated rab acceptor) family protein	[more]
AT1G17700.1	6.9e-27	44.23	prenylated RAB acceptor 1.F1	[more]
AT3G13710.1	9.0e-27	48.23	prenylated RAB acceptor 1.F4	[more]
AT1G55190.1	1.5e-26	48.41	PRA1 (Prenylated rab acceptor) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004895	Prenylated rab acceptor PRA1	PFAM	PF03208	PRA1	coord: 26..165 e-value: 7.6E-47 score: 158.5
IPR004895	Prenylated rab acceptor PRA1	PANTHER	PTHR19317	PRENYLATED RAB ACCEPTOR 1-RELATED	coord: 1..186
None	No IPR available	PANTHER	PTHR19317:SF13	PRA1 FAMILY PROTEIN	coord: 1..186

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy02g018440.1	Lcy02g018440.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane