Lcy02g018400 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy02g018400
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	histone H1
Location	Chr02: 45558053 .. 45560145 (-)
RNA-Seq Expression	Lcy02g018400
Synteny	Lcy02g018400

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCGAAATCTAGCCCTATTAGCCGTCGATGACGTTTGATCGAACGGCCGTAATTTAAACTTGGAAAAGTTGGCGATCCGCGTGATAGGCTTATCTACCAATCAGATTTCAGCTTCCCTGTGTTGAACATGACATGCCGACTATTTAAGCCTAAACATTTTAGTCATTTACTCGCAACGAAATTACCAGTAAGATTTCGAATAGCTGCCCTCTCTTCTCTCTAGATCCCAATTTCATTCCGATAATCTTCGCTTTTCAATTCAATTCTTCTGTTCATAAACCCTAATTCTGCTTTTGGGTTGTGGAATTTTATCTCCTTTCTGCTCCAATGGCTACTGAGGAACCGGTCGTGCCGGTGGAGTCTGCTGCAGAGCCGACTAACGCCGAGCCAGCAGAGGAAAATCCGGCGAACAAGGCCGCGAAGTCGAAGAAGGCTAAGGAGCCTAAAGAGAAGAAGCCAGCTGCTGCTAGAAAACCTAGGAATCCTCCGACTCATCCTCCTTATGAAGAGGTGTGTTGATGATTCAAATTCGGATTTTAGAATTGGATTTTCTTTCGGATTGGTGTTTGGTTTATTTGATCTATTGTGTTGATTTGGTTTGGTGTTTTGGTTTCAGATGATTAAGGATGCGATTGTTACGTTGAAGGAGAGGACTGGTTCGAGTCAGTATGCGATTACTAAATTTATCGAGGAGAAGCAAAAACAACTTCCTTCGAACTTTAAGAAGCTTTTGTTATTCCATTTGAAGAAACTTGTGGCCTCCGGGAAGTTGGTGAAGGTTAAGAGTTCGTTCAAGCTTAAGCCGGCGAAGTCGGCTGTTGTGAAACCTGCTTCTCCTGCGAAGAAGAAGCCAGCACCTGCCAAGCCGAAGCCTAAAGCGGCGGCTAAGACTAAGGCTGTGGCTAAATCTCCTGCGAAGCCGAAAGCAGCTGCAAAGCCGAAGCCGAAGACGGCTGCCAAGCCCAAGGCTGCTCCTAAACCTAAGCCTGCACCCGCTAAGTCAAAGAGCAGTGCTGTTGCGAAGCCTAAAGCTGCTACGAAGACAAAAGCCGCTCCCAAGCCGAAAGCCAAGGAGAAGCCTGCCAAGGCTGCAAGGACATCGACGAGAACCTCACCAGGAAGGAAGGCACCGGCTCCCAAACCGGCGGCAAAGAAAGCACCGGCGGCCAAGAAGGCTCCGGCCAAAAGTGTCAAGGCCAAGAAAGTGAAATCGCCGGCGAAAAAGGCTCCGGCCAAAAGAGGAAAGAAGTAAAGGCAATAGAAGGAAGCTAGCATTCGTAGCGGCGGTCCTGTAAATCCGTTATCCTTGTGGGTGTATAGACCCTTACATGCCGTGCTATAGAGGAGTTTACTTGAGACTTTTTCGAATTTTTCTTTTATTTGTTTATTTGTAGAACTTTTCCCCAAGTTGATGTATCACTCAGCTTAGTTTTTAATGGAAATTCTGTGATCAATTAGGAGCGTTGATTTCGGTTCTCAACCTATGATTTCTACGGGCAATCCAACTGCGTCAATTACCTGTGGAAACGTTTCGTTTCTCTTACGCTAGAAATGGATATGGATTGCGTAACCGAAGTCTGAAGCGTTGTTGCTAAGCTGGGTAAATCTCAATCTTTCTTGTACATCTCGCCCCAACTTTCTGTTTGCACGCTTCCAATTTCGCCTAATTTCTGTCTGAACAATGAATTCTTAGCGATGATGTTTGATTAATTAGCTAGCTTCTTTTGATCGTTTCTTTAGGCTTTGTAGATCATACGAGTTCATTGTTTGAGCAGATGATTTGCATCTTTCTCATAATGTATGGTATAACCTATACAGATGTTTGCTCTGGTTCTCCATTGTAGATTGTTGGCTTTTCTGTGCGTGGATTGATTGCCAAGGAATTTCTATCACAAGGGATGGATTGGATTTTGTATAACTGGGTTAAGAAGTTGTTTGAATTGAAAGAATTTTTAAAGGATAATTGTAGCCACCGTTTCAAAAACATTAAGGTTAAGGAAGCTATTGCTTTAAAATGAAATTTGGGTTTGTGTAAGTTGTAGGTTTGTGATGTTCTGTAGAAGTTGATTTATAGTAAATTGTCCGATGTGTGAG

mRNA sequence

CCGAAATCTAGCCCTATTAGCCGTCGATGACGTTTGATCGAACGGCCGTAATTTAAACTTGGAAAAGTTGGCGATCCGCGTGATAGGCTTATCTACCAATCAGATTTCAGCTTCCCTGTGTTGAACATGACATGCCGACTATTTAAGCCTAAACATTTTAGTCATTTACTCGCAACGAAATTACCAGTAAGATTTCGAATAGCTGCCCTCTCTTCTCTCTAGATCCCAATTTCATTCCGATAATCTTCGCTTTTCAATTCAATTCTTCTGTTCATAAACCCTAATTCTGCTTTTGGGTTGTGGAATTTTATCTCCTTTCTGCTCCAATGGCTACTGAGGAACCGGTCGTGCCGGTGGAGTCTGCTGCAGAGCCGACTAACGCCGAGCCAGCAGAGGAAAATCCGGCGAACAAGGCCGCGAAGTCGAAGAAGGCTAAGGAGCCTAAAGAGAAGAAGCCAGCTGCTGCTAGAAAACCTAGGAATCCTCCGACTCATCCTCCTTATGAAGAGATGATTAAGGATGCGATTGTTACGTTGAAGGAGAGGACTGGTTCGAGTCAGTATGCGATTACTAAATTTATCGAGGAGAAGCAAAAACAACTTCCTTCGAACTTTAAGAAGCTTTTGTTATTCCATTTGAAGAAACTTGTGGCCTCCGGGAAGTTGGTGAAGGTTAAGAGTTCGTTCAAGCTTAAGCCGGCGAAGTCGGCTGTTGTGAAACCTGCTTCTCCTGCGAAGAAGAAGCCAGCACCTGCCAAGCCGAAGCCTAAAGCGGCGGCTAAGACTAAGGCTGTGGCTAAATCTCCTGCGAAGCCGAAAGCAGCTGCAAAGCCGAAGCCGAAGACGGCTGCCAAGCCCAAGGCTGCTCCTAAACCTAAGCCTGCACCCGCTAAGTCAAAGAGCAGTGCTGTTGCGAAGCCTAAAGCTGCTACGAAGACAAAAGCCGCTCCCAAGCCGAAAGCCAAGGAGAAGCCTGCCAAGGCTGCAAGGACATCGACGAGAACCTCACCAGGAAGGAAGGCACCGGCTCCCAAACCGGCGGCAAAGAAAGCACCGGCGGCCAAGAAGGCTCCGGCCAAAAGTGTCAAGGCCAAGAAAGTGAAATCGCCGGCGAAAAAGGCTCCGGCCAAAAGAGGAAAGAAGTAAAGGCAATAGAAGGAAGCTAGCATTCGTAGCGGCGGTCCTGTAAATCCGTTATCCTTGTGGGTGTATAGACCCTTACATGCCGTGCTATAGAGGAGTTTACTTGAGACTTTTTCGAATTTTTCTTTTATTTGTTTATTTGTAGAACTTTTCCCCAAGTTGATGTATCACTCAGCTTAGTTTTTAATGGAAATTCTGTGATCAATTAGGAGCGTTGATTTCGGTTCTCAACCTATGATTTCTACGGGCAATCCAACTGCGTCAATTACCTGTGGAAACGTTTCGTTTCTCTTACGCTAGAAATGGATATGGATTGCGTAACCGAAGTCTGAAGCGTTGTTGCTAAGCTGGATTGTTGGCTTTTCTGTGCGTGGATTGATTGCCAAGGAATTTCTATCACAAGGGATGGATTGGATTTTGTATAACTGGGTTAAGAAGTTGTTTGAATTGAAAGAATTTTTAAAGGATAATTGTAGCCACCGTTTCAAAAACATTAAGGTTAAGGAAGCTATTGCTTTAAAATGAAATTTGGGTTTGTGTAAGTTGTAGGTTTGTGATGTTCTGTAGAAGTTGATTTATAGTAAATTGTCCGATGTGTGAG

Coding sequence (CDS)

ATGGCTACTGAGGAACCGGTCGTGCCGGTGGAGTCTGCTGCAGAGCCGACTAACGCCGAGCCAGCAGAGGAAAATCCGGCGAACAAGGCCGCGAAGTCGAAGAAGGCTAAGGAGCCTAAAGAGAAGAAGCCAGCTGCTGCTAGAAAACCTAGGAATCCTCCGACTCATCCTCCTTATGAAGAGATGATTAAGGATGCGATTGTTACGTTGAAGGAGAGGACTGGTTCGAGTCAGTATGCGATTACTAAATTTATCGAGGAGAAGCAAAAACAACTTCCTTCGAACTTTAAGAAGCTTTTGTTATTCCATTTGAAGAAACTTGTGGCCTCCGGGAAGTTGGTGAAGGTTAAGAGTTCGTTCAAGCTTAAGCCGGCGAAGTCGGCTGTTGTGAAACCTGCTTCTCCTGCGAAGAAGAAGCCAGCACCTGCCAAGCCGAAGCCTAAAGCGGCGGCTAAGACTAAGGCTGTGGCTAAATCTCCTGCGAAGCCGAAAGCAGCTGCAAAGCCGAAGCCGAAGACGGCTGCCAAGCCCAAGGCTGCTCCTAAACCTAAGCCTGCACCCGCTAAGTCAAAGAGCAGTGCTGTTGCGAAGCCTAAAGCTGCTACGAAGACAAAAGCCGCTCCCAAGCCGAAAGCCAAGGAGAAGCCTGCCAAGGCTGCAAGGACATCGACGAGAACCTCACCAGGAAGGAAGGCACCGGCTCCCAAACCGGCGGCAAAGAAAGCACCGGCGGCCAAGAAGGCTCCGGCCAAAAGTGTCAAGGCCAAGAAAGTGAAATCGCCGGCGAAAAAGGCTCCGGCCAAAAGAGGAAAGAAGTAA

Protein sequence

MATEEPVVPVESAAEPTNAEPAEENPANKAAKSKKAKEPKEKKPAAARKPRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASGKLVKVKSSFKLKPAKSAVVKPASPAKKKPAPAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAAPKPKPAPAKSKSSAVAKPKAATKTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKPAAKKAPAAKKAPAKSVKAKKVKSPAKKAPAKRGKK

Homology

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BLAST of Lcy02g018400 vs. ExPASy Swiss-Prot
Match: P08283 (Histone H1 OS=Pisum sativum OX=3888 PE=2 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 2.6e-48
Identity = 167/281 (59.43%), Postives = 186/281 (66.19%), Query Frame = 0


Query: 1   MATEEPVVPVESAAEPTNAEPA---------EENPANKAAKSKKAKEPKEKKPAAARKPR 60
           MATEEP+V VE+  EP   EP          +E P  +  K+KKAK  K KK   A KPR
Sbjct: 1   MATEEPIVAVETVPEPIVTEPTTITEPEVPEKEEPKAEVEKTKKAKGSKPKK---ASKPR 60

Query: 61  NPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASG 120
           NP +HP YEEMIKDAIV+LKE+ GSSQYAI KFIEEKQKQLP+NFKKLLL +LKK VASG
Sbjct: 61  NPASHPTYEEMIKDAIVSLKEKNGSSQYAIAKFIEEKQKQLPANFKKLLLQNLKKNVASG 120

Query: 121 KLVKVKSSFKLKPAKSAVVKPASPAKKKPAPAKPKPKAAAKTKAV-AKSPAKPKAAAKPK 180
           KL+KVK SFKL           S A KKPA AKPK K AAK K+V AK  AKPKA A  K
Sbjct: 121 KLIKVKGSFKL-----------SAAAKKPAVAKPKAKTAAKAKSVKAKPAAKPKAKAVVK 180

Query: 181 PKTAAKPKA-APKPKPAPAKSKSSAVAKPKAATKTKAAPKPKAKEKPAKAARTSTRTSPG 240
           PK A+K KA A KPK A AK K+ A      A K KA  KPK+K KPAK A+TS +T+PG
Sbjct: 181 PKVASKAKAVAAKPKKAAAKPKTVAAKTKPTAAKPKAVVKPKSKVKPAKVAKTSVKTTPG 240

Query: 241 RKAPAPKPAAKKAPAAKKAPAKSVKAKKVKSPAKKAPAKRG 271
           +K      AA K  AAKK P KSVKAK VKSP KK   KRG
Sbjct: 241 KKV-----AAVKKVAAKKVPVKSVKAKSVKSPVKKVSVKRG 262

[Close]

BLAST of Lcy02g018400 vs. ExPASy Swiss-Prot
Match: P37218 (Histone H1 OS=Solanum lycopersicum OX=4081 PE=3 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 3.2e-46
Identity = 178/295 (60.34%), Postives = 192/295 (65.08%), Query Frame = 0


Query: 1   MATEEPVVPVESAAEPTNAEPAEENPANKAAKSKKA-KEPKEKKPAAARKPRNPPTHPPY 60
           MATEEPV+ V    E   A    ++ AN  AKS KA KE K KKPAA RK    PTHPPY
Sbjct: 1   MATEEPVI-VNEVVEEQAAPETVKDEANPPAKSGKAKKETKAKKPAAPRKRSATPTHPPY 60

Query: 61  EEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASGKLVKVKSS 120
            EMIKDAIVTLKERTGSSQ+AITKFIEEKQK LPSNFKKLLL  LKK VAS KLVKVK+S
Sbjct: 61  FEMIKDAIVTLKERTGSSQHAITKFIEEKQKSLPSNFKKLLLTQLKKFVASEKLVKVKNS 120

Query: 121 FKLKPAKSAVVKPASPAKKKPAPAK----PKPKAAAKTKAVAKSPAKPKAAAKP------ 180
           +KL P+ S     A PAKKKPA AK     KPKAA K KA   + AKP A AKP      
Sbjct: 121 YKL-PSGSKPAAAAVPAKKKPAAAKSKPAAKPKAAVKPKAKPAAKAKPAAKAKPAAKAKP 180

Query: 181 --KPKTAAKPKAAPKPKP-APAKSKSSAVAKPKAATKTKAAP-------KP--KAKEKPA 240
             K K AAK K A K KP A AK K++A AKPKAA K KAAP       KP  KAK   A
Sbjct: 181 AAKAKPAAKAKPAAKAKPVAKAKPKAAAAAKPKAAVKPKAAPAKTKAAVKPNLKAKTTTA 240

Query: 241 KAARTSTRTSPGRKAPAPKPAAKKAPAAKKAPAKSVKAKKVKSPAKKAPAKRGKK 273
           K A+T+TRT+P RK      AA KA  AKK P K   AK VKSPAKKA  KRG+K
Sbjct: 241 KVAKTATRTTPSRK------AAPKATPAKKEPVKKAPAKNVKSPAKKATPKRGRK 287

[Close]

BLAST of Lcy02g018400 vs. ExPASy Swiss-Prot
Match: P26569 (Histone H1.2 OS=Arabidopsis thaliana OX=3702 GN=At2g30620 PE=1 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 1.8e-41
Identity = 166/286 (58.04%), Postives = 187/286 (65.38%), Query Frame = 0


Query: 1   MATEEPVVP--VESAAEPTNAEPAEENPANKAAKSKKAKEPK-EKKP---AAARKPRNPP 60
           M+ EE  VP  V+S A  T  +  E+ PA K  KSKK    K  KKP   AA  K +   
Sbjct: 1   MSIEEENVPTTVDSGAADTTVKSPEKKPAAKGGKSKKTTTAKATKKPVKAAAPTKKKTTS 60

Query: 61  THPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASGKLV 120
           +HP YEEMIKDAIVTLKERTGSSQYAI KFIEEK K LP  F+KLLL +LK+LVAS KLV
Sbjct: 61  SHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKHKSLPPTFRKLLLVNLKRLVASEKLV 120

Query: 121 KVKSSFKLKPAKSAVV-KPASPAKKK-PAPAKPKPKAA-----AKTKAVAKSPAKPKAAA 180
           KVK+SFK+  A+SA   KPA+P KKK    AKPK K A     AK KA AK   KP A  
Sbjct: 121 KVKASFKIPSARSAATPKPAAPVKKKATVVAKPKGKVAAAVAPAKAKAAAKGTKKPAAKV 180

Query: 181 KPKPKTAAKPKAAPKPKPAPAKSKSSAVAKPKAATKTKA-APKPKAKEKPAKAARTSTRT 240
             K K  AKPKA    K   AK KS +VA   A +KTKA A KPKAKE+PAKA+RTSTRT
Sbjct: 181 VAKAKVTAKPKA----KVTAAKPKSKSVA---AVSKTKAVAAKPKAKERPAKASRTSTRT 240

Query: 241 SPGRKAPAPKPAAKKAPAAKKAPAKSVKAKKVKSPAKKAPAKRGKK 273
           SPG+K  AP   AKK    KKAPAKSV   KVKSPAK+A  ++ KK
Sbjct: 241 SPGKKVAAP---AKKVAVTKKAPAKSV---KVKSPAKRASTRKAKK 273

[Close]

BLAST of Lcy02g018400 vs. ExPASy Swiss-Prot
Match: P26568 (Histone H1.1 OS=Arabidopsis thaliana OX=3702 GN=At1g06760 PE=1 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 7.0e-33
Identity = 142/264 (53.79%), Postives = 162/264 (61.36%), Query Frame = 0


Query: 12  SAAEPTNAEPAEENPANKAAKSKKAKEPKEKKP-AAARKPRNPPTHPPYEEMIKDAIVTL 71
           +A  P      E+ PA K  K+K  KE KEKK  AAA K R   +HP YEEMIKDAIVTL
Sbjct: 17  AADAPVTDAAVEKKPAAKGRKTKNVKEVKEKKTVAAAPKKRTVSSHPTYEEMIKDAIVTL 76

Query: 72  KERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASGKLVKVKSSFKLKPAKSAVV 131
           KERTGSSQYAI KFIEEK+K+LP  F+KLLL +LK+LVASGKLVKVK+SFKL P+ SA  
Sbjct: 77  KERTGSSQYAIQKFIEEKRKELPPTFRKLLLLNLKRLVASGKLVKVKASFKL-PSASAKA 136

Query: 132 KPASPAKKKPAPAKPKPKAAAKTKA----VAKSPAKPKAAAKPKPKTAAKPKAAPKPKPA 191
                A +K APAK KP   A TKA     A S AK   A KPK   A K  A  K KP 
Sbjct: 137 SSPKAAAEKSAPAKKKPATVAVTKAKRKVAAASKAKKTIAVKPKTAAAKKVTAKAKAKPV 196

Query: 192 PAKSKSSAVAKPKAATKTKAA-PKPKAKEKPAKAARTSTRTSPGRKAPAPKPAAKKAPAA 251
           P  +         AATK KA   KPKAK +PAKAA+T+  TSP +KA A           
Sbjct: 197 PRAT--------AAATKRKAVDAKPKAKARPAKAAKTAKVTSPAKKAVAATKKVATVATK 256

Query: 252 KKAPAKS-VKAKKVKSPAKKAPAK 269
           KK P K  VK K VKSPAK+A ++
Sbjct: 257 KKTPVKKVVKPKTVKSPAKRASSR 271

[Close]

BLAST of Lcy02g018400 vs. ExPASy Swiss-Prot
Match: P23444 (Histone H1 OS=Zea mays OX=4577 PE=2 SV=2)

HSP 1 Score: 131.3 bits (329), Expect = 1.6e-29
Identity = 137/258 (53.10%), Postives = 159/258 (61.63%), Query Frame = 0


Query: 3   TEEPVVPVESAAEPTNAEPAEENPANKAAKSKKAKEPKEKKPAAARKPRNPPTHPPYEEM 62
           TE P   V++A E     PA       AAK+KKA  PK+         R  PTH PY EM
Sbjct: 6   TETPAPLVDAAPEAPADAPAAPAADANAAKAKKATAPKK---------RASPTHLPYAEM 65

Query: 63  IKDAIVTLKERTGSSQYAITKFIEEKQK-QLPSNFKKLLLFHLKKLVASGKLVKVKSSFK 122
           + +AI +LKERTGSS YAI KF+E+K K +LP NF+KLL   LKKLVA GKL KVK+S+K
Sbjct: 66  VSEAITSLKERTGSSSYAIAKFVEDKHKAKLPPNFRKLLNVQLKKLVAGGKLTKVKNSYK 125

Query: 123 LKPAKSAVVKPASPAKKKPAPAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAAP 182
           L  A     KP + A KKP     KPKAAAK K  AK+PAK K A KPKP  AAKPKA  
Sbjct: 126 LSSATKPNPKPKA-APKKPKTGAKKPKAAAKPK--AKTPAKAKPATKPKP--AAKPKAVV 185

Query: 183 KPK-PAPAKSKSSAVAKPKAATKTKAAPKPKAKEK-PAKAARTSTRTSPGRKAPAPKPAA 242
           KPK PA  K+K +A AKPK A    A PKP AK+   AKAA+TS + +PG+KAPA K A 
Sbjct: 186 KPKTPAKPKAKPAAKAKPKTA---GAKPKPLAKKAGRAKAAKTSAKDTPGKKAPAKKAAP 245

Query: 243 KKAPAAKKAPAKSVKAKK 258
            K  A     A S KAKK
Sbjct: 246 SKKAATPVRKAPSRKAKK 246

[Close]

BLAST of Lcy02g018400 vs. ExPASy TrEMBL
Match: A0A6J1CWP2 (histone H1 OS=Momordica charantia OX=3673 GN=LOC111015272 PE=3 SV=1)

HSP 1 Score: 416.4 bits (1069), Expect = 9.3e-113
Identity = 260/272 (95.59%), Postives = 263/272 (96.69%), Query Frame = 0


Query: 1   MATEEPVVPVESAAEPTNAEPAEENPANKAAKSKKAKEPKEKKPAAARKPRNPPTHPPYE 60
           MATEEPVVPVESAAEPT+AE AEENP NKAAKSKK+KEPKEKKPAA RKPRNPPTHPPYE
Sbjct: 1   MATEEPVVPVESAAEPTSAEAAEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYE 60

Query: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASGKLVKVKSSF 120
           EMI DAIVTLKERTGSSQYAITKFIEEKQK LPSNFKKLLLFHLKKLVASGKLVKVKSSF
Sbjct: 61  EMINDAIVTLKERTGSSQYAITKFIEEKQKHLPSNFKKLLLFHLKKLVASGKLVKVKSSF 120

Query: 121 KLKPAKSAVVKPASPAKKKPAPAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAA 180
           KLKPAKSAVVKP SPAKKKPA AKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAA
Sbjct: 121 KLKPAKSAVVKPPSPAKKKPAAAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAA 180

Query: 181 PKPKPAPAKSKSSAVAKPKAATKTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKPAAK 240
           PKPKPAPAKSKSSAVAKPKAATKTKAAPKPKAKEKPAK ARTSTRTSPGR+APAPKPA K
Sbjct: 181 PKPKPAPAKSKSSAVAKPKAATKTKAAPKPKAKEKPAKVARTSTRTSPGRRAPAPKPAPK 240

Query: 241 KAPAAKKAPAKSVKAKKVKSPAKKAPAKRGKK 273
           KAPAAKKAPAKSVKAKKVKSPAKKAPAKRGKK
Sbjct: 241 KAPAAKKAPAKSVKAKKVKSPAKKAPAKRGKK 272

[Close]

BLAST of Lcy02g018400 vs. ExPASy TrEMBL
Match: A0A5A7UQL0 (Histone H1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G00660 PE=3 SV=1)

HSP 1 Score: 400.6 bits (1028), Expect = 5.3e-108
Identity = 253/272 (93.01%), Postives = 256/272 (94.12%), Query Frame = 0


Query: 1   MATEEPVVPVESAAEPTNAEPAEENPANKAAKSKKAKEPKEKKPAAARKPRNPPTHPPYE 60
           MATEEPVVPVESAAEPTNAE AEENP NKAAKSKK+KEPKEKKPAA RKPRNPPTHPPYE
Sbjct: 1   MATEEPVVPVESAAEPTNAEQAEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYE 60

Query: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASGKLVKVKSSF 120
           EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASGKLVKVKSSF
Sbjct: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASGKLVKVKSSF 120

Query: 121 KLKPAKSAVVKPASPAKKKPAPAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAA 180
           KLKPAKSAVVKPASPAKKKP  AKPK KA AK KAVAKSPAKPKAAAKPKPKT AKPKAA
Sbjct: 121 KLKPAKSAVVKPASPAKKKPVAAKPKSKAVAKPKAVAKSPAKPKAAAKPKPKTTAKPKAA 180

Query: 181 PKPKPAPAKSKSSAVAKPKAATKTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKPAAK 240
           PKPK AP KSKSSAVAKPKAA KTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKP  K
Sbjct: 181 PKPKAAPPKSKSSAVAKPKAAAKTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKPVVK 240

Query: 241 KAPAAKKAPAKSVKAKKVKSPAKKAPAKRGKK 273
           KAPAAKKAP+KSVKAKKVKS AKKAP+KRG K
Sbjct: 241 KAPAAKKAPSKSVKAKKVKSLAKKAPSKRGSK 272

[Close]

BLAST of Lcy02g018400 vs. ExPASy TrEMBL
Match: A0A1S3BL93 (histone H1 OS=Cucumis melo OX=3656 GN=LOC103491272 PE=3 SV=1)

HSP 1 Score: 400.6 bits (1028), Expect = 5.3e-108
Identity = 253/272 (93.01%), Postives = 256/272 (94.12%), Query Frame = 0


Query: 1   MATEEPVVPVESAAEPTNAEPAEENPANKAAKSKKAKEPKEKKPAAARKPRNPPTHPPYE 60
           MATEEPVVPVESAAEPTNAE AEENP NKAAKSKK+KEPKEKKPAA RKPRNPPTHPPYE
Sbjct: 1   MATEEPVVPVESAAEPTNAEQAEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYE 60

Query: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASGKLVKVKSSF 120
           EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASGKLVKVKSSF
Sbjct: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASGKLVKVKSSF 120

Query: 121 KLKPAKSAVVKPASPAKKKPAPAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAA 180
           KLKPAKSAVVKPASPAKKKP  AKPK KA AK KAVAKSPAKPKAAAKPKPKT AKPKAA
Sbjct: 121 KLKPAKSAVVKPASPAKKKPVAAKPKSKAVAKPKAVAKSPAKPKAAAKPKPKTTAKPKAA 180

Query: 181 PKPKPAPAKSKSSAVAKPKAATKTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKPAAK 240
           PKPK AP KSKSSAVAKPKAA KTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKP  K
Sbjct: 181 PKPKAAPPKSKSSAVAKPKAAAKTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKPVVK 240

Query: 241 KAPAAKKAPAKSVKAKKVKSPAKKAPAKRGKK 273
           KAPAAKKAP+KSVKAKKVKS AKKAP+KRG K
Sbjct: 241 KAPAAKKAPSKSVKAKKVKSLAKKAPSKRGSK 272

[Close]

BLAST of Lcy02g018400 vs. ExPASy TrEMBL
Match: A0A6J1ES19 (histone H1 OS=Cucurbita moschata OX=3662 GN=LOC111437275 PE=3 SV=1)

HSP 1 Score: 394.8 bits (1013), Expect = 2.9e-106
Identity = 250/272 (91.91%), Postives = 260/272 (95.59%), Query Frame = 0


Query: 1   MATEEPVVPVESAAEPTNAEPAEENPANKAAKSKKAKEPKEKKPAAARKPRNPPTHPPYE 60
           MATEEPVVPVESAAEPTNAEPAEENPANKAAKSKK+K+PKEKKPAAARK RNPPTHPPYE
Sbjct: 1   MATEEPVVPVESAAEPTNAEPAEENPANKAAKSKKSKQPKEKKPAAARKTRNPPTHPPYE 60

Query: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASGKLVKVKSSF 120
           EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASGKLVKVKSSF
Sbjct: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASGKLVKVKSSF 120

Query: 121 KLKPAKSAVVKPASPAKKKPAPAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAA 180
           KLK AKSA+VKPASPA K+PA AKPKPKAAAKTKAVAKS AKPKAAAKPKPKTAAKPKAA
Sbjct: 121 KLKSAKSAIVKPASPA-KRPAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAA 180

Query: 181 PKPKPAPAKSKSSAVAKPKAATKTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKPAAK 240
            KPKP  AKSKSS VAKPKAA+KTKAAPKPKAKEKPAKA+RTSTRTSPG+KAPAPKPA K
Sbjct: 181 AKPKPTAAKSKSSVVAKPKAASKTKAAPKPKAKEKPAKASRTSTRTSPGKKAPAPKPAVK 240

Query: 241 KAPAAKKAPAKSVKAKKVKSPAKKAPAKRGKK 273
           KAPA+KKAPAKSV AKKVKSPA+KAPA+R KK
Sbjct: 241 KAPASKKAPAKSVPAKKVKSPARKAPARRAKK 271

[Close]

BLAST of Lcy02g018400 vs. ExPASy TrEMBL
Match: A0A0A0KDR2 (H15 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G407650 PE=3 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 7.1e-105
Identity = 246/272 (90.44%), Postives = 252/272 (92.65%), Query Frame = 0


Query: 1   MATEEPVVPVESAAEPTNAEPAEENPANKAAKSKKAKEPKEKKPAAARKPRNPPTHPPYE 60
           MATEEPVVPVESAAEPTNAE AEENPANK+ +SKK+KEPK+KKPAA RKPRNPPTHPPYE
Sbjct: 1   MATEEPVVPVESAAEPTNAEQAEENPANKSGRSKKSKEPKDKKPAAPRKPRNPPTHPPYE 60

Query: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASGKLVKVKSSF 120
           EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLP NFKKLLLFHLKKLV SGKLVKVKSSF
Sbjct: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPPNFKKLLLFHLKKLVTSGKLVKVKSSF 120

Query: 121 KLKPAKSAVVKPASPAKKKPAPAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAA 180
           KLKPAKSAVVKPASPAKKKP  AKPK K  AK KAVAKSPAKPKAAAKPKPK   KPKAA
Sbjct: 121 KLKPAKSAVVKPASPAKKKPVAAKPKSKPVAKPKAVAKSPAKPKAAAKPKPKATPKPKAA 180

Query: 181 PKPKPAPAKSKSSAVAKPKAATKTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKPAAK 240
           PKPK APAKSKSSAVAKPKAA KTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKP  K
Sbjct: 181 PKPKAAPAKSKSSAVAKPKAAAKTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKPVVK 240

Query: 241 KAPAAKKAPAKSVKAKKVKSPAKKAPAKRGKK 273
           KAPAAKKAP+KSVKAKKVKS AKK+PAKRG K
Sbjct: 241 KAPAAKKAPSKSVKAKKVKSLAKKSPAKRGSK 272

[Close]

BLAST of Lcy02g018400 vs. NCBI nr
Match: XP_022145924.1 (histone H1 [Momordica charantia])

HSP 1 Score: 416.4 bits (1069), Expect = 1.9e-112
Identity = 260/272 (95.59%), Postives = 263/272 (96.69%), Query Frame = 0


Query: 1   MATEEPVVPVESAAEPTNAEPAEENPANKAAKSKKAKEPKEKKPAAARKPRNPPTHPPYE 60
           MATEEPVVPVESAAEPT+AE AEENP NKAAKSKK+KEPKEKKPAA RKPRNPPTHPPYE
Sbjct: 1   MATEEPVVPVESAAEPTSAEAAEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYE 60

Query: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASGKLVKVKSSF 120
           EMI DAIVTLKERTGSSQYAITKFIEEKQK LPSNFKKLLLFHLKKLVASGKLVKVKSSF
Sbjct: 61  EMINDAIVTLKERTGSSQYAITKFIEEKQKHLPSNFKKLLLFHLKKLVASGKLVKVKSSF 120

Query: 121 KLKPAKSAVVKPASPAKKKPAPAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAA 180
           KLKPAKSAVVKP SPAKKKPA AKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAA
Sbjct: 121 KLKPAKSAVVKPPSPAKKKPAAAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAA 180

Query: 181 PKPKPAPAKSKSSAVAKPKAATKTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKPAAK 240
           PKPKPAPAKSKSSAVAKPKAATKTKAAPKPKAKEKPAK ARTSTRTSPGR+APAPKPA K
Sbjct: 181 PKPKPAPAKSKSSAVAKPKAATKTKAAPKPKAKEKPAKVARTSTRTSPGRRAPAPKPAPK 240

Query: 241 KAPAAKKAPAKSVKAKKVKSPAKKAPAKRGKK 273
           KAPAAKKAPAKSVKAKKVKSPAKKAPAKRGKK
Sbjct: 241 KAPAAKKAPAKSVKAKKVKSPAKKAPAKRGKK 272

[Close]

BLAST of Lcy02g018400 vs. NCBI nr
Match: XP_008449373.1 (PREDICTED: histone H1 [Cucumis melo])

HSP 1 Score: 400.6 bits (1028), Expect = 1.1e-107
Identity = 253/272 (93.01%), Postives = 256/272 (94.12%), Query Frame = 0


Query: 1   MATEEPVVPVESAAEPTNAEPAEENPANKAAKSKKAKEPKEKKPAAARKPRNPPTHPPYE 60
           MATEEPVVPVESAAEPTNAE AEENP NKAAKSKK+KEPKEKKPAA RKPRNPPTHPPYE
Sbjct: 1   MATEEPVVPVESAAEPTNAEQAEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYE 60

Query: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASGKLVKVKSSF 120
           EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASGKLVKVKSSF
Sbjct: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASGKLVKVKSSF 120

Query: 121 KLKPAKSAVVKPASPAKKKPAPAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAA 180
           KLKPAKSAVVKPASPAKKKP  AKPK KA AK KAVAKSPAKPKAAAKPKPKT AKPKAA
Sbjct: 121 KLKPAKSAVVKPASPAKKKPVAAKPKSKAVAKPKAVAKSPAKPKAAAKPKPKTTAKPKAA 180

Query: 181 PKPKPAPAKSKSSAVAKPKAATKTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKPAAK 240
           PKPK AP KSKSSAVAKPKAA KTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKP  K
Sbjct: 181 PKPKAAPPKSKSSAVAKPKAAAKTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKPVVK 240

Query: 241 KAPAAKKAPAKSVKAKKVKSPAKKAPAKRGKK 273
           KAPAAKKAP+KSVKAKKVKS AKKAP+KRG K
Sbjct: 241 KAPAAKKAPSKSVKAKKVKSLAKKAPSKRGSK 272

[Close]

BLAST of Lcy02g018400 vs. NCBI nr
Match: KAA0057394.1 (histone H1 [Cucumis melo var. makuwa] >TYK30091.1 histone H1 [Cucumis melo var. makuwa])

HSP 1 Score: 400.6 bits (1028), Expect = 1.1e-107
Identity = 253/272 (93.01%), Postives = 256/272 (94.12%), Query Frame = 0


Query: 1   MATEEPVVPVESAAEPTNAEPAEENPANKAAKSKKAKEPKEKKPAAARKPRNPPTHPPYE 60
           MATEEPVVPVESAAEPTNAE AEENP NKAAKSKK+KEPKEKKPAA RKPRNPPTHPPYE
Sbjct: 1   MATEEPVVPVESAAEPTNAEQAEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYE 60

Query: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASGKLVKVKSSF 120
           EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASGKLVKVKSSF
Sbjct: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASGKLVKVKSSF 120

Query: 121 KLKPAKSAVVKPASPAKKKPAPAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAA 180
           KLKPAKSAVVKPASPAKKKP  AKPK KA AK KAVAKSPAKPKAAAKPKPKT AKPKAA
Sbjct: 121 KLKPAKSAVVKPASPAKKKPVAAKPKSKAVAKPKAVAKSPAKPKAAAKPKPKTTAKPKAA 180

Query: 181 PKPKPAPAKSKSSAVAKPKAATKTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKPAAK 240
           PKPK AP KSKSSAVAKPKAA KTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKP  K
Sbjct: 181 PKPKAAPPKSKSSAVAKPKAAAKTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKPVVK 240

Query: 241 KAPAAKKAPAKSVKAKKVKSPAKKAPAKRGKK 273
           KAPAAKKAP+KSVKAKKVKS AKKAP+KRG K
Sbjct: 241 KAPAAKKAPSKSVKAKKVKSLAKKAPSKRGSK 272

[Close]

BLAST of Lcy02g018400 vs. NCBI nr
Match: XP_022930932.1 (histone H1 [Cucurbita moschata])

HSP 1 Score: 394.8 bits (1013), Expect = 6.0e-106
Identity = 250/272 (91.91%), Postives = 260/272 (95.59%), Query Frame = 0


Query: 1   MATEEPVVPVESAAEPTNAEPAEENPANKAAKSKKAKEPKEKKPAAARKPRNPPTHPPYE 60
           MATEEPVVPVESAAEPTNAEPAEENPANKAAKSKK+K+PKEKKPAAARK RNPPTHPPYE
Sbjct: 1   MATEEPVVPVESAAEPTNAEPAEENPANKAAKSKKSKQPKEKKPAAARKTRNPPTHPPYE 60

Query: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASGKLVKVKSSF 120
           EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASGKLVKVKSSF
Sbjct: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASGKLVKVKSSF 120

Query: 121 KLKPAKSAVVKPASPAKKKPAPAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAA 180
           KLK AKSA+VKPASPA K+PA AKPKPKAAAKTKAVAKS AKPKAAAKPKPKTAAKPKAA
Sbjct: 121 KLKSAKSAIVKPASPA-KRPAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAA 180

Query: 181 PKPKPAPAKSKSSAVAKPKAATKTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKPAAK 240
            KPKP  AKSKSS VAKPKAA+KTKAAPKPKAKEKPAKA+RTSTRTSPG+KAPAPKPA K
Sbjct: 181 AKPKPTAAKSKSSVVAKPKAASKTKAAPKPKAKEKPAKASRTSTRTSPGKKAPAPKPAVK 240

Query: 241 KAPAAKKAPAKSVKAKKVKSPAKKAPAKRGKK 273
           KAPA+KKAPAKSV AKKVKSPA+KAPA+R KK
Sbjct: 241 KAPASKKAPAKSVPAKKVKSPARKAPARRAKK 271

[Close]

BLAST of Lcy02g018400 vs. NCBI nr
Match: XP_023533642.1 (histone H1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 392.1 bits (1006), Expect = 3.9e-105
Identity = 252/274 (91.97%), Postives = 260/274 (94.89%), Query Frame = 0


Query: 1   MATEEPVVPVESAAEPTNAEPAEENPANKAAKSKKAKEPKEKKP--AAARKPRNPPTHPP 60
           MATEEPVVPVESAAEPTNAEPAEENPANKAAKSKK+KEPKEKKP  AAARK RNPPTHPP
Sbjct: 1   MATEEPVVPVESAAEPTNAEPAEENPANKAAKSKKSKEPKEKKPAAAAARKTRNPPTHPP 60

Query: 61  YEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASGKLVKVKS 120
           YEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASGKLVKVKS
Sbjct: 61  YEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASGKLVKVKS 120

Query: 121 SFKLKPAKSAVVKPASPAKKKPAPAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPK 180
           SFKLK AKSA+VKPASPA KKPA AKPKPKAAAKTKAVAKS AKPKAAAKPKPKTAAKPK
Sbjct: 121 SFKLKSAKSAIVKPASPA-KKPAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPK 180

Query: 181 AAPKPKPAPAKSKSSAVAKPKAATKTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKPA 240
           AA KPKP  AKSKSS VAKPKAA+KTKAAPKPKAKEKPAKA+RTSTRTSPG+KAPAPKPA
Sbjct: 181 AAAKPKPTAAKSKSSVVAKPKAASKTKAAPKPKAKEKPAKASRTSTRTSPGKKAPAPKPA 240

Query: 241 AKKAPAAKKAPAKSVKAKKVKSPAKKAPAKRGKK 273
            KKAPA+KKAPAKSV AKKVKSPA+KAPA+R KK
Sbjct: 241 VKKAPASKKAPAKSVPAKKVKSPARKAPARRAKK 273

[Close]

BLAST of Lcy02g018400 vs. TAIR 10
Match: AT2G30620.1 (winged-helix DNA-binding transcription factor family protein )

HSP 1 Score: 171.0 bits (432), Expect = 1.3e-42
Identity = 166/286 (58.04%), Postives = 187/286 (65.38%), Query Frame = 0


Query: 1   MATEEPVVP--VESAAEPTNAEPAEENPANKAAKSKKAKEPK-EKKP---AAARKPRNPP 60
           M+ EE  VP  V+S A  T  +  E+ PA K  KSKK    K  KKP   AA  K +   
Sbjct: 1   MSIEEENVPTTVDSGAADTTVKSPEKKPAAKGGKSKKTTTAKATKKPVKAAAPTKKKTTS 60

Query: 61  THPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASGKLV 120
           +HP YEEMIKDAIVTLKERTGSSQYAI KFIEEK K LP  F+KLLL +LK+LVAS KLV
Sbjct: 61  SHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKHKSLPPTFRKLLLVNLKRLVASEKLV 120

Query: 121 KVKSSFKLKPAKSAVV-KPASPAKKK-PAPAKPKPKAA-----AKTKAVAKSPAKPKAAA 180
           KVK+SFK+  A+SA   KPA+P KKK    AKPK K A     AK KA AK   KP A  
Sbjct: 121 KVKASFKIPSARSAATPKPAAPVKKKATVVAKPKGKVAAAVAPAKAKAAAKGTKKPAAKV 180

Query: 181 KPKPKTAAKPKAAPKPKPAPAKSKSSAVAKPKAATKTKA-APKPKAKEKPAKAARTSTRT 240
             K K  AKPKA    K   AK KS +VA   A +KTKA A KPKAKE+PAKA+RTSTRT
Sbjct: 181 VAKAKVTAKPKA----KVTAAKPKSKSVA---AVSKTKAVAAKPKAKERPAKASRTSTRT 240

Query: 241 SPGRKAPAPKPAAKKAPAAKKAPAKSVKAKKVKSPAKKAPAKRGKK 273
           SPG+K  AP   AKK    KKAPAKSV   KVKSPAK+A  ++ KK
Sbjct: 241 SPGKKVAAP---AKKVAVTKKAPAKSV---KVKSPAKRASTRKAKK 273

[Close]

BLAST of Lcy02g018400 vs. TAIR 10
Match: AT1G06760.1 (winged-helix DNA-binding transcription factor family protein )

HSP 1 Score: 142.5 bits (358), Expect = 5.0e-34
Identity = 142/264 (53.79%), Postives = 162/264 (61.36%), Query Frame = 0


Query: 12  SAAEPTNAEPAEENPANKAAKSKKAKEPKEKKP-AAARKPRNPPTHPPYEEMIKDAIVTL 71
           +A  P      E+ PA K  K+K  KE KEKK  AAA K R   +HP YEEMIKDAIVTL
Sbjct: 17  AADAPVTDAAVEKKPAAKGRKTKNVKEVKEKKTVAAAPKKRTVSSHPTYEEMIKDAIVTL 76

Query: 72  KERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASGKLVKVKSSFKLKPAKSAVV 131
           KERTGSSQYAI KFIEEK+K+LP  F+KLLL +LK+LVASGKLVKVK+SFKL P+ SA  
Sbjct: 77  KERTGSSQYAIQKFIEEKRKELPPTFRKLLLLNLKRLVASGKLVKVKASFKL-PSASAKA 136

Query: 132 KPASPAKKKPAPAKPKPKAAAKTKA----VAKSPAKPKAAAKPKPKTAAKPKAAPKPKPA 191
                A +K APAK KP   A TKA     A S AK   A KPK   A K  A  K KP 
Sbjct: 137 SSPKAAAEKSAPAKKKPATVAVTKAKRKVAAASKAKKTIAVKPKTAAAKKVTAKAKAKPV 196

Query: 192 PAKSKSSAVAKPKAATKTKAA-PKPKAKEKPAKAARTSTRTSPGRKAPAPKPAAKKAPAA 251
           P  +         AATK KA   KPKAK +PAKAA+T+  TSP +KA A           
Sbjct: 197 PRAT--------AAATKRKAVDAKPKAKARPAKAAKTAKVTSPAKKAVAATKKVATVATK 256

Query: 252 KKAPAKS-VKAKKVKSPAKKAPAK 269
           KK P K  VK K VKSPAK+A ++
Sbjct: 257 KKTPVKKVVKPKTVKSPAKRASSR 271

[Close]

BLAST of Lcy02g018400 vs. TAIR 10
Match: AT2G30620.2 (winged-helix DNA-binding transcription factor family protein )

HSP 1 Score: 126.3 bits (316), Expect = 3.7e-29
Identity = 128/278 (46.04%), Postives = 147/278 (52.88%), Query Frame = 0


Query: 1   MATEEPVVP--VESAAEPTNAEPAEENPANKAAKSKKAKEPK-EKKP---AAARKPRNPP 60
           M+ EE  VP  V+S A  T  +  E+ PA K  KSKK    K  KKP   AA  K +   
Sbjct: 1   MSIEEENVPTTVDSGAADTTVKSPEKKPAAKGGKSKKTTTAKATKKPVKAAAPTKKKTTS 60

Query: 61  THPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASGKLV 120
           +HP YEEMIKDAIVTLKERTGSSQYAI KFIEEK K LP  F+KLLL +LK+LVAS KLV
Sbjct: 61  SHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKHKSLPPTFRKLLLVNLKRLVASEKLV 120

Query: 121 KVKSSFKLKPAKSAVVKPASPAKKKPAPAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTA 180
           KVK+SFK+  A+SA                                              
Sbjct: 121 KVKASFKIPSARSA---------------------------------------------- 180

Query: 181 AKPKAAPKPKPAPAKSKSSAVAKPKAATKTKAAPKPKAKEKPAKAARTSTRTSPGRKAPA 240
               A PKP  AP K K++ VAKP                   KA+RTSTRTSPG+K  A
Sbjct: 181 ----ATPKP-AAPVKKKATVVAKP-------------------KASRTSTRTSPGKKVAA 202

Query: 241 PKPAAKKAPAAKKAPAKSVKAKKVKSPAKKAPAKRGKK 273
           P   AKK    KKAPAKSV   KVKSPAK+A  ++ KK
Sbjct: 241 P---AKKVAVTKKAPAKSV---KVKSPAKRASTRKAKK 202

[Close]

BLAST of Lcy02g018400 vs. TAIR 10
Match: AT2G18050.1 (histone H1-3 )

HSP 1 Score: 63.2 bits (152), Expect = 3.8e-10
Identity = 67/168 (39.88%), Postives = 91/168 (54.17%), Query Frame = 0


Query: 42  KKPAAARKPRNP--PTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQ-LPSNFKK 101
           KK  AA+KPR P   THPPY +MIK+A++ LKE+ GSS YAI K IEEK K  LP +F+K
Sbjct: 8   KKTPAAKKPRKPKTTTHPPYFQMIKEALMVLKEKNGSSPYAIAKKIEEKHKSLLPESFRK 67

Query: 102 LLLFHLKKLVASGKLVKVKSSFKLKPAKSAVVKPASPAKKKPAPAKPKPKAAAKTKAVAK 161
            L   LK  VA GKLVK+++S+KL      + +      KK    + K +   +T++ + 
Sbjct: 68  TLSLQLKNSVAKGKLVKIRASYKLSDTTKMITRQQDKKNKKNMKQEDK-EITKRTRSSST 127

Query: 162 SPAKPKAAAKPKPKTAAKPKAAPKPKPAPAKSKSSAVAKPKAATKTKA 207
            P K  +  K + K   K    P       KS  S+V K KA   + A
Sbjct: 128 RPKKTVSVNKQEKKRKVKKARQP-------KSIKSSVGKKKAMKASAA 167

[Close]

BLAST of Lcy02g018400 vs. TAIR 10
Match: AT2G18050.2 (histone H1-3 )

HSP 1 Score: 45.1 bits (105), Expect = 1.1e-04
Identity = 54/146 (36.99%), Postives = 76/146 (52.05%), Query Frame = 0


Query: 62  MIKDAIVTLKERTGSSQYAITKFIEEKQKQ-LPSNFKKLLLFHLKKLVASGKLVKVKSSF 121
           MIK+A++ LKE+ GSS YAI K IEEK K  LP +F+K L   LK  VA GKLVK+++S+
Sbjct: 1   MIKEALMVLKEKNGSSPYAIAKKIEEKHKSLLPESFRKTLSLQLKNSVAKGKLVKIRASY 60

Query: 122 KLKPAKSAVVKPASPAKKKPAPAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAA 181
           KL      + +      KK    + K +   +T++ +  P K  +  K + K   K    
Sbjct: 61  KLSDTTKMITRQQDKKNKKNMKQEDK-EITKRTRSSSTRPKKTVSVNKQEKKRKVKKARQ 120

Query: 182 PKPKPAPAKSKSSAVAKPKAATKTKA 207
           P       KS  S+V K KA   + A
Sbjct: 121 P-------KSIKSSVGKKKAMKASAA 138

The following BLAST results are available for this feature:

BLAST of Lcy02g018400 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P08283	2.6e-48	59.43	Histone H1 OS=Pisum sativum OX=3888 PE=2 SV=1	[more]
P37218	3.2e-46	60.34	Histone H1 OS=Solanum lycopersicum OX=4081 PE=3 SV=1	[more]
P26569	1.8e-41	58.04	Histone H1.2 OS=Arabidopsis thaliana OX=3702 GN=At2g30620 PE=1 SV=1	[more]
P26568	7.0e-33	53.79	Histone H1.1 OS=Arabidopsis thaliana OX=3702 GN=At1g06760 PE=1 SV=1	[more]
P23444	1.6e-29	53.10	Histone H1 OS=Zea mays OX=4577 PE=2 SV=2	[more]

BLAST of Lcy02g018400 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CWP2	9.3e-113	95.59	histone H1 OS=Momordica charantia OX=3673 GN=LOC111015272 PE=3 SV=1	[more]
A0A5A7UQL0	5.3e-108	93.01	Histone H1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G00660 PE=...	[more]
A0A1S3BL93	5.3e-108	93.01	histone H1 OS=Cucumis melo OX=3656 GN=LOC103491272 PE=3 SV=1	[more]
A0A6J1ES19	2.9e-106	91.91	histone H1 OS=Cucurbita moschata OX=3662 GN=LOC111437275 PE=3 SV=1	[more]
A0A0A0KDR2	7.1e-105	90.44	H15 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G407650 PE=3 SV...	[more]

BLAST of Lcy02g018400 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022145924.1	1.9e-112	95.59	histone H1 [Momordica charantia]	[more]
XP_008449373.1	1.1e-107	93.01	PREDICTED: histone H1 [Cucumis melo]	[more]
KAA0057394.1	1.1e-107	93.01	histone H1 [Cucumis melo var. makuwa] >TYK30091.1 histone H1 [Cucumis melo var. ...	[more]
XP_022930932.1	6.0e-106	91.91	histone H1 [Cucurbita moschata]	[more]
XP_023533642.1	3.9e-105	91.97	histone H1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lcy02g018400 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G30620.1	1.3e-42	58.04	winged-helix DNA-binding transcription factor family protein	[more]
AT1G06760.1	5.0e-34	53.79	winged-helix DNA-binding transcription factor family protein	[more]
AT2G30620.2	3.7e-29	46.04	winged-helix DNA-binding transcription factor family protein	[more]
AT2G18050.1	3.8e-10	39.88	histone H1-3	[more]
AT2G18050.2	1.1e-04	36.99	histone H1-3	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005819	Linker histone H1/H5	PRINTS	PR00624	HISTONEH5	coord: 152..166 score: 40.74 coord: 204..223 score: 23.33 coord: 42..63 score: 39.9 coord: 182..199 score: 37.65 coord: 69..86 score: 43.21
IPR005818	Linker histone H1/H5, domain H15	SMART	SM00526	h15plus2	coord: 53..119 e-value: 2.7E-34 score: 129.9
IPR005818	Linker histone H1/H5, domain H15	PFAM	PF00538	Linker_histone	coord: 56..122 e-value: 2.5E-19 score: 69.4
IPR005818	Linker histone H1/H5, domain H15	PROSITE	PS51504	H15	coord: 55..124 score: 30.695316
IPR005818	Linker histone H1/H5, domain H15	CDD	cd00073	H15	coord: 53..129 e-value: 8.90236E-19 score: 76.8911
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 51..129 e-value: 1.9E-22 score: 81.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..48
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 250..272
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 121..272
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..62
None	No IPR available	PANTHER	PTHR11467	HISTONE H1	coord: 2..272
None	No IPR available	PANTHER	PTHR11467:SF131	HISTONE H1.1	coord: 2..272
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 52..128

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy02g018400.1	Lcy02g018400.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030261	chromosome condensation
biological_process	GO:0045910	negative regulation of DNA recombination
biological_process	GO:0006334	nucleosome assembly
biological_process	GO:0016584	nucleosome positioning
cellular_component	GO:0000786	nucleosome
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003690	double-stranded DNA binding
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0031492	nucleosomal DNA binding
molecular_function	GO:0003677	DNA binding