Lcy02g018170 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy02g018170
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	RING-H2 finger protein ATL16-like
Location	Chr02: 45316181 .. 45317492 (+)
RNA-Seq Expression	Lcy02g018170
Synteny	Lcy02g018170

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGAAGAATTCTACCTCTCAGTCTTCCACATTTGCTTATGGAACCAACCCAGAAAAGTCTCCATAGCTTTGAGTCTCAAGTTCTTTTATCTTTCAAAAACCAACAGATTTCAACCTATCAGTCTCCATTTTCTACTGTTTCAGATTCTGCTTCTCCTATTTTAGCTGTTGCAGTTCTGAGTGTGATGGGCACAGTTTTCTTGCTGCTGGGCTACTACATTTTCATCAGCAAATGTTGCTCTAACTGGCACCAGTTTAGTCTGCTGAGGAGGTTTTCAAGTTTTCATACCCAACAGCATGAAGATCCTTTTATAGCTCTCTCTCCAACAATGTGGAATCGCGGCCTCGAAGAATCAATGATTCGCCAAATCCCAGCTTTTCAATTCGAAAGAGACGGTGAAGGTAGCGGTATCTATGGCTGCGTGGTTTGTCTGAGCGAGTTTCAAGAGAATGAAATGCTGAGAGTCCTACCAAAATGCAGCCACACATTTCACTTGGACTGCATTGATATCTGGCTGCAAAGCAACTCCAATTGCCCTCTTTGCAGAACAAGCATTTCAGGCACAACAAAGCCTCCACTTGATCATATTGTAGCTCCAAGCTCTTCTCCTCAAAACTCACAGCTGCTTACCAACAGCCTAATGGGCAGTGATGAAGATTTTGTAGTCATTGAATTGGGTGGTGAAGATGAAGTAGTTTCCTCAGCAGGGCAACAAGAGAGTACTGTTTCAAGAGAAGTACTGGTTCAGCAGCCCAGATGCCATTCTCCTAAAAAATTCGAGAACAAGGTTGCCAAACCGAAAACTCGAAAGTGTCACCATGTTTCAATCATGGGAGACGAGGGCATCGACATTAGAGTGAAGGATGATCAGTTCTTTATCCAACCCATCAGAAGATCCTTTTCCATGGATTCTGCAGCTAATCAACAGCTTTACTTAACCGTTCAAATGATAATACATCAAGGTAGGCAAATCACTGAGTCCAGTAGTAGTAGTAATGCAGAAAGTGACAGCAGAAACCGAAGATCGTTCTTCCCATTTCGATCGGGGCGAGGATTAAAAAATGCAATTCTTCCACTTGAGTCTGATATGTAAATATCCAAAGATTGATTGATTTCTTTCAGATTTAGTTTCTGTTTGCTTTTGATTTCAGAAGGTAGTAAAAAAGTTAATAGGTGAATGAGGTATTACACACAAAACAGATGGTGTTTATTTGTAAGTTTTTGATGAAATTTTACTCATTATGAAAAAGAGATGAAAAAATGGAACTTGTTGAAACTTGGCATGCTATTGGAAATCATTGCTTAAACCACT

mRNA sequence

TTGAAGAATTCTACCTCTCAGTCTTCCACATTTGCTTATGGAACCAACCCAGAAAAGTCTCCATAGCTTTGAGTCTCAAGTTCTTTTATCTTTCAAAAACCAACAGATTTCAACCTATCAGTCTCCATTTTCTACTGTTTCAGATTCTGCTTCTCCTATTTTAGCTGTTGCAGTTCTGAGTGTGATGGGCACAGTTTTCTTGCTGCTGGGCTACTACATTTTCATCAGCAAATGTTGCTCTAACTGGCACCAGTTTAGTCTGCTGAGGAGGTTTTCAAGTTTTCATACCCAACAGCATGAAGATCCTTTTATAGCTCTCTCTCCAACAATGTGGAATCGCGGCCTCGAAGAATCAATGATTCGCCAAATCCCAGCTTTTCAATTCGAAAGAGACGGTGAAGGTAGCGGTATCTATGGCTGCGTGGTTTGTCTGAGCGAGTTTCAAGAGAATGAAATGCTGAGAGTCCTACCAAAATGCAGCCACACATTTCACTTGGACTGCATTGATATCTGGCTGCAAAGCAACTCCAATTGCCCTCTTTGCAGAACAAGCATTTCAGGCACAACAAAGCCTCCACTTGATCATATTGTAGCTCCAAGCTCTTCTCCTCAAAACTCACAGCTGCTTACCAACAGCCTAATGGGCAGTGATGAAGATTTTGTAGTCATTGAATTGGGTGGTGAAGATGAAGTAGTTTCCTCAGCAGGGCAACAAGAGAGTACTGTTTCAAGAGAAGTACTGGTTCAGCAGCCCAGATGCCATTCTCCTAAAAAATTCGAGAACAAGGTTGCCAAACCGAAAACTCGAAAGTGTCACCATGTTTCAATCATGGGAGACGAGGGCATCGACATTAGAGTGAAGGATGATCAGTTCTTTATCCAACCCATCAGAAGATCCTTTTCCATGGATTCTGCAGCTAATCAACAGCTTTACTTAACCGTTCAAATGATAATACATCAAGGTAGGCAAATCACTGAGTCCAGTAGTAGTAGTAATGCAGAAAGTGACAGCAGAAACCGAAGATCGTTCTTCCCATTTCGATCGGGGCGAGGATTAAAAAATGCAATTCTTCCACTTGAGTCTGATATGTAAATATCCAAAGATTGATTGATTTCTTTCAGATTTAGTTTCTGTTTGCTTTTGATTTCAGAAGGTAGTAAAAAAGTTAATAGGTGAATGAGGTATTACACACAAAACAGATGGTGTTTATTTGTAAGTTTTTGATGAAATTTTACTCATTATGAAAAAGAGATGAAAAAATGGAACTTGTTGAAACTTGGCATGCTATTGGAAATCATTGCTTAAACCACT

Coding sequence (CDS)

ATGGAACCAACCCAGAAAAGTCTCCATAGCTTTGAGTCTCAAGTTCTTTTATCTTTCAAAAACCAACAGATTTCAACCTATCAGTCTCCATTTTCTACTGTTTCAGATTCTGCTTCTCCTATTTTAGCTGTTGCAGTTCTGAGTGTGATGGGCACAGTTTTCTTGCTGCTGGGCTACTACATTTTCATCAGCAAATGTTGCTCTAACTGGCACCAGTTTAGTCTGCTGAGGAGGTTTTCAAGTTTTCATACCCAACAGCATGAAGATCCTTTTATAGCTCTCTCTCCAACAATGTGGAATCGCGGCCTCGAAGAATCAATGATTCGCCAAATCCCAGCTTTTCAATTCGAAAGAGACGGTGAAGGTAGCGGTATCTATGGCTGCGTGGTTTGTCTGAGCGAGTTTCAAGAGAATGAAATGCTGAGAGTCCTACCAAAATGCAGCCACACATTTCACTTGGACTGCATTGATATCTGGCTGCAAAGCAACTCCAATTGCCCTCTTTGCAGAACAAGCATTTCAGGCACAACAAAGCCTCCACTTGATCATATTGTAGCTCCAAGCTCTTCTCCTCAAAACTCACAGCTGCTTACCAACAGCCTAATGGGCAGTGATGAAGATTTTGTAGTCATTGAATTGGGTGGTGAAGATGAAGTAGTTTCCTCAGCAGGGCAACAAGAGAGTACTGTTTCAAGAGAAGTACTGGTTCAGCAGCCCAGATGCCATTCTCCTAAAAAATTCGAGAACAAGGTTGCCAAACCGAAAACTCGAAAGTGTCACCATGTTTCAATCATGGGAGACGAGGGCATCGACATTAGAGTGAAGGATGATCAGTTCTTTATCCAACCCATCAGAAGATCCTTTTCCATGGATTCTGCAGCTAATCAACAGCTTTACTTAACCGTTCAAATGATAATACATCAAGGTAGGCAAATCACTGAGTCCAGTAGTAGTAGTAATGCAGAAAGTGACAGCAGAAACCGAAGATCGTTCTTCCCATTTCGATCGGGGCGAGGATTAAAAAATGCAATTCTTCCACTTGAGTCTGATATGTAA

Protein sequence

MEPTQKSLHSFESQVLLSFKNQQISTYQSPFSTVSDSASPILAVAVLSVMGTVFLLLGYYIFISKCCSNWHQFSLLRRFSSFHTQQHEDPFIALSPTMWNRGLEESMIRQIPAFQFERDGEGSGIYGCVVCLSEFQENEMLRVLPKCSHTFHLDCIDIWLQSNSNCPLCRTSISGTTKPPLDHIVAPSSSPQNSQLLTNSLMGSDEDFVVIELGGEDEVVSSAGQQESTVSREVLVQQPRCHSPKKFENKVAKPKTRKCHHVSIMGDEGIDIRVKDDQFFIQPIRRSFSMDSAANQQLYLTVQMIIHQGRQITESSSSSNAESDSRNRRSFFPFRSGRGLKNAILPLESDM

Homology

[Close]

BLAST of Lcy02g018170 vs. ExPASy Swiss-Prot
Match: Q9LSW9 (RING-H2 finger protein ATL16 OS=Arabidopsis thaliana OX=3702 GN=ATL16 PE=2 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 1.2e-64
Identity = 155/342 (45.32%), Postives = 209/342 (61.11%), Query Frame = 0


Query: 40  PILAVAVLSVMGTVFLLLGYYIFISKCCSNWHQFSLLRRFS-SFHTQQHEDPFIALSPTM 99
           PILAVAV+ ++ T FLL+ YY+F+ KCC NWH+  +L RFS S   +  +DP +  SP +
Sbjct: 35  PILAVAVIGILATAFLLVSYYVFVIKCCLNWHRIDILGRFSLSRRRRNDQDPLMVYSPEL 94

Query: 100 WNRGLEESMIRQIPAFQF-ERDGEGSGIY-------------GCVVCLSEFQENEMLRVL 159
            +RGL+ES+IR IP F+F +R  +  G++              C VCLSEFQ+ E LR++
Sbjct: 95  RSRGLDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEKRSQECSVCLSEFQDEEKLRII 154

Query: 160 PKCSHTFHLDCIDIWLQSNSNCPLCRTSISGTTKPPLDHIVAPSSSPQNSQLLTNSLMGS 219
           P CSH FH+DCID+WLQ+N+NCPLCRT +S  T  P D + APS+SP+N  +L       
Sbjct: 155 PNCSHLFHIDCIDVWLQNNANCPLCRTRVSCDTSFPPDRVSAPSTSPENLVMLR-----G 214

Query: 220 DEDFVVIELG---GEDEVVSSAGQ----QESTVSREVL---VQQPRCHSPKKFENKVAKP 279
           + ++VVIELG   G D      G+    QE + S  +L    Q     SPKK +      
Sbjct: 215 ENEYVVIELGSSIGSDRDSPRHGRLLTGQERSNSGYLLNENTQNSISPSPKKLDRGGLPR 274

Query: 280 KTRKCHHVSIMGDEGIDI-RVKDDQF-FIQPIRRSFSMDSAANQQLYLTVQMIIHQGRQI 339
           K RK H ++ MGDE IDI R KD+QF  IQPIRRS SMDS+A++QLYL VQ  I + R++
Sbjct: 275 KFRKLHKMTSMGDECIDIRRGKDEQFGSIQPIRRSISMDSSADRQLYLAVQEAIRKNREV 334

Query: 340 T------ESSSSSNAESDSRNRRSFFPFRSGRGLKNAI-LPL 348
                    SSSS   S+S+ +RSFF F S R  +++  LPL
Sbjct: 335 LVVGDGGGCSSSSGNVSNSKVKRSFFSFGSSRRSRSSSKLPL 371

[Close]

BLAST of Lcy02g018170 vs. ExPASy Swiss-Prot
Match: P93823 (RING-H2 finger protein ATL1 OS=Arabidopsis thaliana OX=3702 GN=ATL1 PE=2 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 5.8e-64
Identity = 160/362 (44.20%), Postives = 206/362 (56.91%), Query Frame = 0


Query: 25  STYQSP-FSTVSDSAS--PILAVAVLSVMGTVFLLLGYYIFISKCCSNWHQFSLLRRFSS 84
           +T+ SP F   S S +  PILA+AV+ ++ T FLL+ YYIF+ KCC NWHQ  + RR   
Sbjct: 24  TTFTSPIFPRTSSSGTNFPILAIAVIGILATAFLLVSYYIFVIKCCLNWHQIDIFRR--- 83

Query: 85  FHTQQHEDPFIALSPTMWNRGLEESMIRQIPAFQFER-------DGEGSGIYGCVVCLSE 144
                 ++P +  SP   NRGL+ES IR IP F+F++       + +      C VCL+E
Sbjct: 84  RRRSSDQNPLMIYSPHEVNRGLDESAIRAIPVFKFKKRDVVAGEEDQSKNSQECSVCLNE 143

Query: 145 FQENEMLRVLPKCSHTFHLDCIDIWLQSNSNCPLCRTSISGTTKPPLDHIVAPSSSPQNS 204
           FQE+E LR++P C H FH+DCIDIWLQ N+NCPLCRTS+S      LD I APSS  +NS
Sbjct: 144 FQEDEKLRIIPNCCHVFHIDCIDIWLQGNANCPLCRTSVSCEASFTLDLISAPSSPRENS 203

Query: 205 ------QLLTNSLMGSDEDFVVIELGGEDEVVSSAGQQESTVSREVLVQQPRCHS----- 264
                  L    ++G D+DFVVIELG      S+   +ES  + + L +Q R  S     
Sbjct: 204 PHSRNRNLEPGLVLGGDDDFVVIELG-----ASNGNNRESVRNIDFLTEQERVTSNEVST 263

Query: 265 ----------PKKFENKVAKPKTRKCHHVSIMGDEGIDIRVKDDQF-FIQPIRRSFSMDS 324
                     P KF N+    K RK H V+ MGDE ID R KD  F  IQPIRRS SMDS
Sbjct: 264 GNSPKSVSPLPIKFGNRGMYKKERKFHKVTSMGDECIDTRGKDGHFGEIQPIRRSISMDS 323

Query: 325 AANQQLYLTVQ-MIIHQGRQIT-----ESSSSSNAESDSRNRRSFFPFRSGRGLK-NAIL 348
           + ++QLYL VQ  I  + RQI      E SSSS   +    +R FF F S R  K ++IL
Sbjct: 324 SVDRQLYLAVQEEISRRNRQIPVAGDGEDSSSSGGGNSRVMKRCFFSFGSSRTSKSSSIL 377

[Close]

BLAST of Lcy02g018170 vs. ExPASy Swiss-Prot
Match: P0C041 (Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana OX=3702 GN=ATL53 PE=3 SV=2)

HSP 1 Score: 116.7 bits (291), Expect = 5.3e-25
Identity = 75/207 (36.23%), Postives = 111/207 (53.62%), Query Frame = 0


Query: 42  LAVAVLSVMGTVFLLLGYYIFISKCCSN---------WHQFSLLRRFSSFHTQQHEDPFI 101
           L +A+  +  T FLL  YY  +SK C+N           +  ++   +S      +DPF 
Sbjct: 61  LVIAIFGIFATAFLLAAYYTLVSKYCANDTTNEAASESGRSDIILDVNSPERGDQDDPFA 120

Query: 102 ALSPTMWNRGLEESMIRQIPAFQFERDGEGSGIYG--CVVCLSEFQENEMLRVLPKCSHT 161
             S T    GL++++I++I  F+ ++   G  I G  C +CL EF E+E LR+LPKC+HT
Sbjct: 121 LESST---AGLDDTLIKKIGFFKLKKHQNGFKINGTDCSICLGEFNEDESLRLLPKCNHT 180

Query: 162 FHLDCIDIWLQSNSNCPLCRTS-ISGTTKPPLDHIVAPSSSPQNSQLLTNSLMGSDEDFV 221
           FH+ CID WL+S+SNCPLCR   I  TT+ P  H+V       N    T++ +GS E  V
Sbjct: 181 FHVVCIDRWLKSHSNCPLCRAKIIVPTTQQPEHHVVV-----MNLDRFTSN-VGSAEGNV 240

Query: 222 VIELGGEDEVVSSAGQQESTVSREVLV 237
           V++   E+  VS +    S  S   +V
Sbjct: 241 VVDDHREEVSVSISSHHPSWFSAADIV 258

[Close]

BLAST of Lcy02g018170 vs. ExPASy Swiss-Prot
Match: Q9LF64 (RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 9.0e-25
Identity = 66/150 (44.00%), Postives = 90/150 (60.00%), Query Frame = 0


Query: 32  STVSDSASPILAVAVLSVMGTVFLLLGYYIFISKCCSNWHQFSLLRRFSSFHTQQHEDPF 91
           S+ S S SP+L +A++ ++ +  +L+ YY  ISK C   HQ S     +  H    E  F
Sbjct: 48  SSSSSSFSPLL-IALIGILTSALILVSYYTLISKYCHRHHQTSSSETLNLNH--NGEGFF 107

Query: 92  IALSPTMWN-RGLEESMIRQIPAFQFER-DGEGSGIYGCVVCLSEFQENEMLRVLPKCSH 151
            +      N  GL ESMI+ I  ++++  DG   G   C VCLSEF+ENE LR+LPKC+H
Sbjct: 108 SSTQRISTNGDGLNESMIKSITVYKYKSGDGFVDG-SDCSVCLSEFEENESLRLLPKCNH 167

Query: 152 TFHLDCIDIWLQSNSNCPLCRTSISGTTKP 180
            FHL CID WL+S+SNCPLCR  ++G   P
Sbjct: 168 AFHLPCIDTWLKSHSNCPLCRAFVTGVNNP 193

[Close]

BLAST of Lcy02g018170 vs. ExPASy Swiss-Prot
Match: Q9SRQ8 (RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2)

HSP 1 Score: 110.9 bits (276), Expect = 2.9e-23
Identity = 74/222 (33.33%), Postives = 115/222 (51.80%), Query Frame = 0


Query: 35  SDSASPILAVAVLSVMGTVFLLLGYYIFISKCC------SNWHQFSLLRRFSSFHTQQHE 94
           S   SP+L +A++ ++ + F+L+ YY  ISK C      S+    + + R SS +T Q  
Sbjct: 53  SSDFSPLL-IALIGILASAFILVSYYTLISKYCHRRRHNSSSTSAAAINRISSDYTWQGT 112

Query: 95  DPFIALSPTMWNR--------GLEESMIRQIPAFQFERDGEGSGIYGCVVCLSEFQENEM 154
           +       T  N+        GL+ES+I+ I  +++ +         C VCLSEFQENE 
Sbjct: 113 NNNNNNGATNPNQTIGGGGGDGLDESLIKSITVYKYRKMDGFVESSDCSVCLSEFQENES 172

Query: 155 LRVLPKCSHTFHLDCIDIWLQSNSNCPLCRTSISGTTKPPLDHIVAPSSSPQNSQLLT-- 214
           LR+LPKC+H FH+ CID WL+S+SNCPLCR  I  ++   +  +        N Q++T  
Sbjct: 173 LRLLPKCNHAFHVPCIDTWLKSHSNCPLCRAFIVTSSAVEIVDLT-------NQQIVTEN 232

Query: 215 NSLMGSDEDFVVIELGGEDEVVSSAGQQESTVSREVLVQQPR 241
           NS+   D+  VV+ L  E+    +    E +  +   +Q  R
Sbjct: 233 NSISTGDDSVVVVNLDLENSRSRNETVNEGSTPKPPEMQDSR 266

[Close]

BLAST of Lcy02g018170 vs. ExPASy TrEMBL
Match: A0A6J1ET78 (RING-H2 finger protein ATL16-like OS=Cucurbita moschata OX=3662 GN=LOC111437354 PE=4 SV=1)

HSP 1 Score: 621.3 bits (1601), Expect = 2.4e-174
Identity = 308/351 (87.75%), Postives = 325/351 (92.59%), Query Frame = 0


Query: 1   MEPTQKSLHSFESQVLLSFKNQQISTYQSPFSTVSDSASPILAVAVLSVMGTVFLLLGYY 60
           MEPTQKSLH FES    S   QQIS+Y SPFS+VSDSASPILAVAVLSVMGTVFLLLGYY
Sbjct: 1   MEPTQKSLHIFESPAFASLTKQQISSYHSPFSSVSDSASPILAVAVLSVMGTVFLLLGYY 60

Query: 61  IFISKCCSNWHQFSLLRRFSSFHTQQHEDPFIALSPTMWNRGLEESMIRQIPAFQFERDG 120
           IFISKCCSNWH FSLLRRFSSFH+QQHEDPFIALSPTMWNRGLE+SMI QIP F+FE+D 
Sbjct: 61  IFISKCCSNWHHFSLLRRFSSFHSQQHEDPFIALSPTMWNRGLEQSMIGQIPTFRFEKDD 120

Query: 121 EGSGIYGCVVCLSEFQENEMLRVLPKCSHTFHLDCIDIWLQSNSNCPLCRTSISGTTKPP 180
           EGSG+YGCVVCLSEFQENE LRVLPKCSHTFHLDCID+WLQSNSNCPLCRTSISGTTKPP
Sbjct: 121 EGSGLYGCVVCLSEFQENETLRVLPKCSHTFHLDCIDVWLQSNSNCPLCRTSISGTTKPP 180

Query: 181 LDHIVAPSSSPQNSQLLTNSLMGSDEDFVVIELGGEDEVVSSAGQQESTVSREVLVQQPR 240
           +DHIVAPSSSPQNSQLL+NSLMGSDEDFVVIELG EDEVVSS GQQEST+SRE LVQQPR
Sbjct: 181 IDHIVAPSSSPQNSQLLSNSLMGSDEDFVVIELGSEDEVVSSTGQQESTISREALVQQPR 240

Query: 241 CHSPKKFENKVAKPKTRKCHHVSIMGDEGIDIRVKDDQFFIQPIRRSFSMDSAANQQLYL 300
            HSPKK ENKV K KTRKCHHVSIMGDEGI++R KD+QFFIQPIRRSFSMDSAA+QQLYL
Sbjct: 241 YHSPKKLENKVGKSKTRKCHHVSIMGDEGINVRAKDEQFFIQPIRRSFSMDSAADQQLYL 300

Query: 301 TVQMIIHQGRQITESSSSSNAESDSRNRRSFFPFRSGRGLKNAILPLESDM 352
           TVQMIIHQ RQI ESSSSS+AE+DSRNRRSFFPFRSGRG KN ILPLESDM
Sbjct: 301 TVQMIIHQDRQINESSSSSSAENDSRNRRSFFPFRSGRGFKNTILPLESDM 351

[Close]

BLAST of Lcy02g018170 vs. ExPASy TrEMBL
Match: A0A6J1K6J7 (RING-H2 finger protein ATL16-like OS=Cucurbita maxima OX=3661 GN=LOC111491128 PE=4 SV=1)

HSP 1 Score: 617.1 bits (1590), Expect = 4.6e-173
Identity = 307/351 (87.46%), Postives = 324/351 (92.31%), Query Frame = 0


Query: 1   MEPTQKSLHSFESQVLLSFKNQQISTYQSPFSTVSDSASPILAVAVLSVMGTVFLLLGYY 60
           MEPTQKSLH FES    S   QQIS+Y SPFS+VSDSASPILAVAVLSVMGTV LLLGYY
Sbjct: 1   MEPTQKSLHIFESPAFESLTKQQISSYHSPFSSVSDSASPILAVAVLSVMGTVLLLLGYY 60

Query: 61  IFISKCCSNWHQFSLLRRFSSFHTQQHEDPFIALSPTMWNRGLEESMIRQIPAFQFERDG 120
           IFI+KCCSNWH FSLLRRFSSFH+QQHEDPFIALSPTMWNRGLE+SMI QIP F+FE D 
Sbjct: 61  IFITKCCSNWHHFSLLRRFSSFHSQQHEDPFIALSPTMWNRGLEQSMIGQIPTFRFEGDD 120

Query: 121 EGSGIYGCVVCLSEFQENEMLRVLPKCSHTFHLDCIDIWLQSNSNCPLCRTSISGTTKPP 180
           EGSG+YGCVVCLSEFQENEMLRVLPKCSHTFHLDCID+WLQSNSNCPLCRTSISGTTKPP
Sbjct: 121 EGSGLYGCVVCLSEFQENEMLRVLPKCSHTFHLDCIDVWLQSNSNCPLCRTSISGTTKPP 180

Query: 181 LDHIVAPSSSPQNSQLLTNSLMGSDEDFVVIELGGEDEVVSSAGQQESTVSREVLVQQPR 240
           +DHIVAPSSSPQNSQLL+NSLMGSDEDFVVIELG EDEVVSS GQQEST+SRE LVQQPR
Sbjct: 181 IDHIVAPSSSPQNSQLLSNSLMGSDEDFVVIELGREDEVVSSTGQQESTISREALVQQPR 240

Query: 241 CHSPKKFENKVAKPKTRKCHHVSIMGDEGIDIRVKDDQFFIQPIRRSFSMDSAANQQLYL 300
            HSPKK ENKV K KTRKCHHVSIMGDEGI++R KD+QFFIQPIRRSFSMDSAA+QQLYL
Sbjct: 241 YHSPKKLENKVGKSKTRKCHHVSIMGDEGINVRAKDEQFFIQPIRRSFSMDSAADQQLYL 300

Query: 301 TVQMIIHQGRQITESSSSSNAESDSRNRRSFFPFRSGRGLKNAILPLESDM 352
           TVQMIIHQ RQI ESSSSS+AE+DSRNRRSFFPFRSGRG KN ILPLESDM
Sbjct: 301 TVQMIIHQDRQINESSSSSSAENDSRNRRSFFPFRSGRGFKNTILPLESDM 351

[Close]

BLAST of Lcy02g018170 vs. ExPASy TrEMBL
Match: A0A0A0L809 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G393910 PE=4 SV=1)

HSP 1 Score: 558.5 bits (1438), Expect = 1.9e-155
Identity = 295/355 (83.10%), Postives = 311/355 (87.61%), Query Frame = 0


Query: 1   MEPTQKSLHSFESQVLLSFKNQQIST-YQSPFSTVSDSASPILAVAVLSVMGTVFLLLGY 60
           ME TQK+LHSFE Q  L  K+QQI T Y+S FSTVSDSASP+LAV +LSVMGT FLLL Y
Sbjct: 1   MESTQKTLHSFEFQAFLPIKDQQIPTSYRSSFSTVSDSASPVLAVVILSVMGTAFLLLSY 60

Query: 61  YIFISKCCSNWHQFSLLRRFSSFHT-QQHEDPFIALSP-TMWNRGLEESMIRQIPAFQFE 120
           YIFI+KCC N HQFSLLRRFSSF T QQ EDPFIALSP TMWN GLEESMIRQIPAF+FE
Sbjct: 61  YIFITKCCYNCHQFSLLRRFSSFLTPQQREDPFIALSPTTMWNCGLEESMIRQIPAFRFE 120

Query: 121 RDGEGSGIYGCVVCLSEFQENEMLRVLPKCSHTFHLDCIDIWLQSNSNCPLCRTSISGTT 180
           RDGE SGIYGCVVCLSEFQENEMLRVLPKCSHTFHLDCIDIWLQSNSNCPLCRTSISG T
Sbjct: 121 RDGEHSGIYGCVVCLSEFQENEMLRVLPKCSHTFHLDCIDIWLQSNSNCPLCRTSISGIT 180

Query: 181 KPPLDHIVAPSSSPQNSQLLTNSLMGSDEDFVVIELGGEDEVVSSAGQQESTVSREVLVQ 240
           KPP+D  VAPSSSPQNSQLL+N LMGSDEDFVVIELG EDEVV S GQQE   SREVLVQ
Sbjct: 181 KPPIDQTVAPSSSPQNSQLLSNGLMGSDEDFVVIELGSEDEVVFSEGQQEGNASREVLVQ 240

Query: 241 QPRCHSPKKFENKVAKPKTRKCHHVSIMGDEGIDIRVKDDQFFIQPIRRSFSMDSAANQQ 300
           Q    + KK ENK+ KPKTRKCHHVSIMGDEGID+R KDDQFF QPIRRSFSMDSAA+QQ
Sbjct: 241 Q----TSKKTENKIRKPKTRKCHHVSIMGDEGIDVREKDDQFFTQPIRRSFSMDSAADQQ 300

Query: 301 LYLTVQMIIHQGRQITESSSSSN-AESDSRNRRSFFPFRSGRGLKNAILPLESDM 352
           LYLTV+MIIHQGRQIT SSSSS+ AESDSRNRRSF P RSGRG KNAILPLESD+
Sbjct: 301 LYLTVEMIIHQGRQITRSSSSSSGAESDSRNRRSFLPSRSGRGCKNAILPLESDL 351

[Close]

BLAST of Lcy02g018170 vs. ExPASy TrEMBL
Match: A0A6J1CXJ5 (RING-H2 finger protein ATL16-like OS=Momordica charantia OX=3673 GN=LOC111015355 PE=4 SV=1)

HSP 1 Score: 553.5 bits (1425), Expect = 6.3e-154
Identity = 275/299 (91.97%), Postives = 287/299 (95.99%), Query Frame = 0


Query: 54  FLLLGYYIFISKCCSNWHQFSLLRRFSSFHTQQHEDPFIALSPTMWNRGLEESMIRQIPA 113
           FLLLGYYIFI+KCCSNWHQFSLLRRFSSFHTQQHEDPFIALSPTMWNRGLEESMIR+IPA
Sbjct: 226 FLLLGYYIFINKCCSNWHQFSLLRRFSSFHTQQHEDPFIALSPTMWNRGLEESMIREIPA 285

Query: 114 FQFERDGEGSGIYGCVVCLSEFQENEMLRVLPKCSHTFHLDCIDIWLQSNSNCPLCRTSI 173
           FQFERDG G GIYGCVVCLSEFQ++EMLRVLPKCSHTFHLDCIDIWLQSNSNCPLCRTSI
Sbjct: 286 FQFERDGGGRGIYGCVVCLSEFQDDEMLRVLPKCSHTFHLDCIDIWLQSNSNCPLCRTSI 345

Query: 174 SGTTKPPLDHIVAPSSSPQNSQLLTNSLMGSDEDFVVIELGGEDEVVSSAGQQESTVSRE 233
           SGTTKPP+DHIVAPSSSPQNSQLL+NSLMGSDEDFVVIELGGEDEVVSSAGQQE TVSRE
Sbjct: 346 SGTTKPPIDHIVAPSSSPQNSQLLSNSLMGSDEDFVVIELGGEDEVVSSAGQQERTVSRE 405

Query: 234 VLV-QQPRCHSPKKFENKVAKPKTRKCHHVSIMGDEGIDIRVKDDQFFIQPIRRSFSMDS 293
           VLV QQPR HSPKKFENKV K KTRKCHHVSIMGDEGI++R KDDQFFIQPIRRSFSMDS
Sbjct: 406 VLVQQQPRNHSPKKFENKVGKSKTRKCHHVSIMGDEGINVREKDDQFFIQPIRRSFSMDS 465

Query: 294 AANQQLYLTVQMIIHQGRQITESSSSSNAESDSRNRRSFFPFRSGRGLKNAILPLESDM 352
           AA+QQLYLTVQMIIHQG QITESSS++ AESDSRNRRSF PFRSGRG KNAILPLESD+
Sbjct: 466 AADQQLYLTVQMIIHQGSQITESSSTT-AESDSRNRRSFLPFRSGRGFKNAILPLESDL 523

[Close]

BLAST of Lcy02g018170 vs. ExPASy TrEMBL
Match: A0A5A7T7A7 (RING-H2 finger protein ATL1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G00990 PE=4 SV=1)

HSP 1 Score: 442.2 bits (1136), Expect = 2.0e-120
Identity = 224/255 (87.84%), Postives = 232/255 (90.98%), Query Frame = 0


Query: 98  MWNRGLEESMIRQIPAFQFERDGEGSGIYGCVVCLSEFQENEMLRVLPKCSHTFHLDCID 157
           MWNRGLEESMIRQIPAF+FERDGE SGIYGCVVCLSEFQENEMLR LPKCSHTFHLDCID
Sbjct: 1   MWNRGLEESMIRQIPAFRFERDGEHSGIYGCVVCLSEFQENEMLRALPKCSHTFHLDCID 60

Query: 158 IWLQSNSNCPLCRTSISGTTKPPLDHIVAPSSSPQNSQLLTNSLMGSDEDFVVIELGGED 217
           IWLQSNSNCPLCRTSISG TKPP+  IVAPSSSPQNSQLL+NSLMGSDEDFVVIELG ED
Sbjct: 61  IWLQSNSNCPLCRTSISGITKPPIHQIVAPSSSPQNSQLLSNSLMGSDEDFVVIELGSED 120

Query: 218 EVVSSAGQQESTVSREVLVQQPRCHSPKKFENKVAKPKTRKCHHVSIMGDEGIDIRVKDD 277
           EVV S GQQE   SR V VQQ    +PKK ENK+ KPKTRKCHHVSIMGDEGID+R KDD
Sbjct: 121 EVVFSEGQQEGNASRNVPVQQ----TPKKTENKIGKPKTRKCHHVSIMGDEGIDVREKDD 180

Query: 278 QFFIQPIRRSFSMDSAANQQLYLTVQMIIHQGRQITE-SSSSSNAESDSRNRRSFFPFRS 337
           QFF QPIRRSFSMDSAA+QQLYLTVQMIIHQGRQITE SSSSS+AESDSRNRRSFFPFRS
Sbjct: 181 QFFTQPIRRSFSMDSAADQQLYLTVQMIIHQGRQITESSSSSSSAESDSRNRRSFFPFRS 240

Query: 338 GRGLKNAILPLESDM 352
           GRG KNAILPLESDM
Sbjct: 241 GRGCKNAILPLESDM 251

[Close]

BLAST of Lcy02g018170 vs. NCBI nr
Match: XP_023533032.1 (RING-H2 finger protein ATL16-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 622.9 bits (1605), Expect = 1.7e-174
Identity = 309/351 (88.03%), Postives = 326/351 (92.88%), Query Frame = 0


Query: 1   MEPTQKSLHSFESQVLLSFKNQQISTYQSPFSTVSDSASPILAVAVLSVMGTVFLLLGYY 60
           MEPTQKSLH FES    S   QQIS+Y SPFS+VSDSASPILAVAVLSVMGTVFLLLGYY
Sbjct: 1   MEPTQKSLHIFESPAFESLTKQQISSYHSPFSSVSDSASPILAVAVLSVMGTVFLLLGYY 60

Query: 61  IFISKCCSNWHQFSLLRRFSSFHTQQHEDPFIALSPTMWNRGLEESMIRQIPAFQFERDG 120
           IFISKCCSNWH FSLLRRFSSFH+QQHEDPFIALSPTMWNRGLE+SMI QIP F+FE+D 
Sbjct: 61  IFISKCCSNWHHFSLLRRFSSFHSQQHEDPFIALSPTMWNRGLEQSMIGQIPTFRFEKDD 120

Query: 121 EGSGIYGCVVCLSEFQENEMLRVLPKCSHTFHLDCIDIWLQSNSNCPLCRTSISGTTKPP 180
           EGSG+YGCVVCLSEFQENEMLRVLPKCSHTFHLDCID+WLQSNSNCPLCRTSISGTTKPP
Sbjct: 121 EGSGLYGCVVCLSEFQENEMLRVLPKCSHTFHLDCIDVWLQSNSNCPLCRTSISGTTKPP 180

Query: 181 LDHIVAPSSSPQNSQLLTNSLMGSDEDFVVIELGGEDEVVSSAGQQESTVSREVLVQQPR 240
           +DHIVAPSSSPQNSQLL+NSLMGSDEDFVVIELG EDEVVSS GQQEST+SRE LVQQPR
Sbjct: 181 IDHIVAPSSSPQNSQLLSNSLMGSDEDFVVIELGSEDEVVSSTGQQESTISREALVQQPR 240

Query: 241 CHSPKKFENKVAKPKTRKCHHVSIMGDEGIDIRVKDDQFFIQPIRRSFSMDSAANQQLYL 300
            HSPKK ENKV K KTRKCHHVSIMGDEGI++R KD+QFFIQPIRRSFSMDSAA+QQLYL
Sbjct: 241 YHSPKKLENKVGKSKTRKCHHVSIMGDEGINVRAKDEQFFIQPIRRSFSMDSAADQQLYL 300

Query: 301 TVQMIIHQGRQITESSSSSNAESDSRNRRSFFPFRSGRGLKNAILPLESDM 352
           TVQMIIHQ RQI ESSSSS+AE+DSRNRRSFFPFRSGRG KN ILPLESDM
Sbjct: 301 TVQMIIHQDRQINESSSSSSAENDSRNRRSFFPFRSGRGFKNTILPLESDM 351

[Close]

BLAST of Lcy02g018170 vs. NCBI nr
Match: XP_022931044.1 (RING-H2 finger protein ATL16-like [Cucurbita moschata])

HSP 1 Score: 621.3 bits (1601), Expect = 5.0e-174
Identity = 308/351 (87.75%), Postives = 325/351 (92.59%), Query Frame = 0


Query: 1   MEPTQKSLHSFESQVLLSFKNQQISTYQSPFSTVSDSASPILAVAVLSVMGTVFLLLGYY 60
           MEPTQKSLH FES    S   QQIS+Y SPFS+VSDSASPILAVAVLSVMGTVFLLLGYY
Sbjct: 1   MEPTQKSLHIFESPAFASLTKQQISSYHSPFSSVSDSASPILAVAVLSVMGTVFLLLGYY 60

Query: 61  IFISKCCSNWHQFSLLRRFSSFHTQQHEDPFIALSPTMWNRGLEESMIRQIPAFQFERDG 120
           IFISKCCSNWH FSLLRRFSSFH+QQHEDPFIALSPTMWNRGLE+SMI QIP F+FE+D 
Sbjct: 61  IFISKCCSNWHHFSLLRRFSSFHSQQHEDPFIALSPTMWNRGLEQSMIGQIPTFRFEKDD 120

Query: 121 EGSGIYGCVVCLSEFQENEMLRVLPKCSHTFHLDCIDIWLQSNSNCPLCRTSISGTTKPP 180
           EGSG+YGCVVCLSEFQENE LRVLPKCSHTFHLDCID+WLQSNSNCPLCRTSISGTTKPP
Sbjct: 121 EGSGLYGCVVCLSEFQENETLRVLPKCSHTFHLDCIDVWLQSNSNCPLCRTSISGTTKPP 180

Query: 181 LDHIVAPSSSPQNSQLLTNSLMGSDEDFVVIELGGEDEVVSSAGQQESTVSREVLVQQPR 240
           +DHIVAPSSSPQNSQLL+NSLMGSDEDFVVIELG EDEVVSS GQQEST+SRE LVQQPR
Sbjct: 181 IDHIVAPSSSPQNSQLLSNSLMGSDEDFVVIELGSEDEVVSSTGQQESTISREALVQQPR 240

Query: 241 CHSPKKFENKVAKPKTRKCHHVSIMGDEGIDIRVKDDQFFIQPIRRSFSMDSAANQQLYL 300
            HSPKK ENKV K KTRKCHHVSIMGDEGI++R KD+QFFIQPIRRSFSMDSAA+QQLYL
Sbjct: 241 YHSPKKLENKVGKSKTRKCHHVSIMGDEGINVRAKDEQFFIQPIRRSFSMDSAADQQLYL 300

Query: 301 TVQMIIHQGRQITESSSSSNAESDSRNRRSFFPFRSGRGLKNAILPLESDM 352
           TVQMIIHQ RQI ESSSSS+AE+DSRNRRSFFPFRSGRG KN ILPLESDM
Sbjct: 301 TVQMIIHQDRQINESSSSSSAENDSRNRRSFFPFRSGRGFKNTILPLESDM 351

[Close]

BLAST of Lcy02g018170 vs. NCBI nr
Match: KAG6606381.1 (RING-H2 finger protein ATL16, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036321.1 RING-H2 finger protein ATL16, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 618.2 bits (1593), Expect = 4.3e-173
Identity = 307/351 (87.46%), Postives = 324/351 (92.31%), Query Frame = 0


Query: 1   MEPTQKSLHSFESQVLLSFKNQQISTYQSPFSTVSDSASPILAVAVLSVMGTVFLLLGYY 60
           MEPTQKSLH FES    S   QQIS+Y SPFS+VSDSASPILAVAVLSVMGTV LLLGYY
Sbjct: 1   MEPTQKSLHIFESPAFESLTKQQISSYHSPFSSVSDSASPILAVAVLSVMGTVLLLLGYY 60

Query: 61  IFISKCCSNWHQFSLLRRFSSFHTQQHEDPFIALSPTMWNRGLEESMIRQIPAFQFERDG 120
           IFISKCCSNWH FSLLRRFSSFH+QQHEDPFIALSPTMWNRGLE+SMI QIP F+FE+D 
Sbjct: 61  IFISKCCSNWHHFSLLRRFSSFHSQQHEDPFIALSPTMWNRGLEQSMIGQIPTFRFEKDD 120

Query: 121 EGSGIYGCVVCLSEFQENEMLRVLPKCSHTFHLDCIDIWLQSNSNCPLCRTSISGTTKPP 180
           EGSG+YGCVVCLSEFQE EMLRVLPKCSHTFHLDCID+WLQSNSNCPLCRTSISGTTKPP
Sbjct: 121 EGSGLYGCVVCLSEFQEKEMLRVLPKCSHTFHLDCIDVWLQSNSNCPLCRTSISGTTKPP 180

Query: 181 LDHIVAPSSSPQNSQLLTNSLMGSDEDFVVIELGGEDEVVSSAGQQESTVSREVLVQQPR 240
           +DHIVAPSSSPQNSQLL+NSLMGSDEDFVVIELG EDEVVSS GQQEST+SRE LVQQPR
Sbjct: 181 IDHIVAPSSSPQNSQLLSNSLMGSDEDFVVIELGSEDEVVSSTGQQESTISREALVQQPR 240

Query: 241 CHSPKKFENKVAKPKTRKCHHVSIMGDEGIDIRVKDDQFFIQPIRRSFSMDSAANQQLYL 300
            HSPKK ENKV K KTRKCHHVSIMGDEGI++R KD+QFFIQPIRRSFSMDSAA+QQLYL
Sbjct: 241 YHSPKKLENKVGKSKTRKCHHVSIMGDEGINVRAKDEQFFIQPIRRSFSMDSAADQQLYL 300

Query: 301 TVQMIIHQGRQITESSSSSNAESDSRNRRSFFPFRSGRGLKNAILPLESDM 352
           TVQMIIHQ RQI ESSSSS+AE+DSRNRRSFFPFRSGRG KN ILPLESDM
Sbjct: 301 TVQMIIHQDRQINESSSSSSAENDSRNRRSFFPFRSGRGFKNTILPLESDM 351

[Close]

BLAST of Lcy02g018170 vs. NCBI nr
Match: XP_022995659.1 (RING-H2 finger protein ATL16-like [Cucurbita maxima])

HSP 1 Score: 617.1 bits (1590), Expect = 9.5e-173
Identity = 307/351 (87.46%), Postives = 324/351 (92.31%), Query Frame = 0


Query: 1   MEPTQKSLHSFESQVLLSFKNQQISTYQSPFSTVSDSASPILAVAVLSVMGTVFLLLGYY 60
           MEPTQKSLH FES    S   QQIS+Y SPFS+VSDSASPILAVAVLSVMGTV LLLGYY
Sbjct: 1   MEPTQKSLHIFESPAFESLTKQQISSYHSPFSSVSDSASPILAVAVLSVMGTVLLLLGYY 60

Query: 61  IFISKCCSNWHQFSLLRRFSSFHTQQHEDPFIALSPTMWNRGLEESMIRQIPAFQFERDG 120
           IFI+KCCSNWH FSLLRRFSSFH+QQHEDPFIALSPTMWNRGLE+SMI QIP F+FE D 
Sbjct: 61  IFITKCCSNWHHFSLLRRFSSFHSQQHEDPFIALSPTMWNRGLEQSMIGQIPTFRFEGDD 120

Query: 121 EGSGIYGCVVCLSEFQENEMLRVLPKCSHTFHLDCIDIWLQSNSNCPLCRTSISGTTKPP 180
           EGSG+YGCVVCLSEFQENEMLRVLPKCSHTFHLDCID+WLQSNSNCPLCRTSISGTTKPP
Sbjct: 121 EGSGLYGCVVCLSEFQENEMLRVLPKCSHTFHLDCIDVWLQSNSNCPLCRTSISGTTKPP 180

Query: 181 LDHIVAPSSSPQNSQLLTNSLMGSDEDFVVIELGGEDEVVSSAGQQESTVSREVLVQQPR 240
           +DHIVAPSSSPQNSQLL+NSLMGSDEDFVVIELG EDEVVSS GQQEST+SRE LVQQPR
Sbjct: 181 IDHIVAPSSSPQNSQLLSNSLMGSDEDFVVIELGREDEVVSSTGQQESTISREALVQQPR 240

Query: 241 CHSPKKFENKVAKPKTRKCHHVSIMGDEGIDIRVKDDQFFIQPIRRSFSMDSAANQQLYL 300
            HSPKK ENKV K KTRKCHHVSIMGDEGI++R KD+QFFIQPIRRSFSMDSAA+QQLYL
Sbjct: 241 YHSPKKLENKVGKSKTRKCHHVSIMGDEGINVRAKDEQFFIQPIRRSFSMDSAADQQLYL 300

Query: 301 TVQMIIHQGRQITESSSSSNAESDSRNRRSFFPFRSGRGLKNAILPLESDM 352
           TVQMIIHQ RQI ESSSSS+AE+DSRNRRSFFPFRSGRG KN ILPLESDM
Sbjct: 301 TVQMIIHQDRQINESSSSSSAENDSRNRRSFFPFRSGRGFKNTILPLESDM 351

[Close]

BLAST of Lcy02g018170 vs. NCBI nr
Match: XP_038889009.1 (RING-H2 finger protein ATL16-like [Benincasa hispida])

HSP 1 Score: 587.4 bits (1513), Expect = 8.1e-164
Identity = 301/344 (87.50%), Postives = 313/344 (90.99%), Query Frame = 0


Query: 1   MEPTQKSLHSFESQVLLSFKNQQISTYQSPFSTVSDSASPILAVAVLSVMGTVFLLLGYY 60
           MEPTQKSLHSFE Q  L  KNQQI +YQSPFSTVSDS SP+LAVAVLSVMGT FLLLGYY
Sbjct: 1   MEPTQKSLHSFEFQAFLPIKNQQIPSYQSPFSTVSDSTSPVLAVAVLSVMGTAFLLLGYY 60

Query: 61  IFISKCCSNWHQFSLLRRFSSFHT-QQHEDPFIALSP-TMWNRGLEESMIRQIPAFQFER 120
           IFISKCCSNWHQFSLLRRFSSFHT QQ EDPFIALSP TMWNRGLEESMIRQIPAFQFER
Sbjct: 61  IFISKCCSNWHQFSLLRRFSSFHTPQQDEDPFIALSPTTMWNRGLEESMIRQIPAFQFER 120

Query: 121 DGEGSGIYGCVVCLSEFQENEMLRVLPKCSHTFHLDCIDIWLQSNSNCPLCRTSISGTTK 180
           DGEGSGIY CVVCLS+F+ENEMLRVLPKCSHTFHLDCIDIWLQSNSNCPLCRTSISG TK
Sbjct: 121 DGEGSGIYSCVVCLSKFRENEMLRVLPKCSHTFHLDCIDIWLQSNSNCPLCRTSISGITK 180

Query: 181 PPLDHIVAPSSSPQNSQLLTNSLMGSDEDFVVIELGGEDEVVSSAGQQESTVSREVLVQQ 240
           PP+D IVAPSSSPQNSQLL+NS+MGSDEDFVVIELG EDE V S GQ E   SREVLVQQ
Sbjct: 181 PPIDQIVAPSSSPQNSQLLSNSIMGSDEDFVVIELGREDEEVFSPGQHEGNASREVLVQQ 240

Query: 241 PRCHSPKKFENKVAKPKTRKCHHVSIMGDEGIDIRVKDDQFFIQPIRRSFSMDSAANQQL 300
           PR HSPKK ENKV KPKTRKCHHVSIMGDEGI++R  DDQFF QPIRRSFSMDSAA+QQL
Sbjct: 241 PRYHSPKKLENKVGKPKTRKCHHVSIMGDEGINVRANDDQFFTQPIRRSFSMDSAADQQL 300

Query: 301 YLTVQMIIHQGRQITESSSS-SNAESDSRNRRSFFPFRSGRGLK 342
           YLTVQMIIHQ RQITESSSS S+AE DSRNRRSFFPFRSGRGL+
Sbjct: 301 YLTVQMIIHQDRQITESSSSGSSAEIDSRNRRSFFPFRSGRGLQ 344

[Close]

BLAST of Lcy02g018170 vs. TAIR 10
Match: AT5G43420.1 (RING/U-box superfamily protein )

HSP 1 Score: 248.4 bits (633), Expect = 8.3e-66
Identity = 155/342 (45.32%), Postives = 209/342 (61.11%), Query Frame = 0


Query: 40  PILAVAVLSVMGTVFLLLGYYIFISKCCSNWHQFSLLRRFS-SFHTQQHEDPFIALSPTM 99
           PILAVAV+ ++ T FLL+ YY+F+ KCC NWH+  +L RFS S   +  +DP +  SP +
Sbjct: 35  PILAVAVIGILATAFLLVSYYVFVIKCCLNWHRIDILGRFSLSRRRRNDQDPLMVYSPEL 94

Query: 100 WNRGLEESMIRQIPAFQF-ERDGEGSGIY-------------GCVVCLSEFQENEMLRVL 159
            +RGL+ES+IR IP F+F +R  +  G++              C VCLSEFQ+ E LR++
Sbjct: 95  RSRGLDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEKRSQECSVCLSEFQDEEKLRII 154

Query: 160 PKCSHTFHLDCIDIWLQSNSNCPLCRTSISGTTKPPLDHIVAPSSSPQNSQLLTNSLMGS 219
           P CSH FH+DCID+WLQ+N+NCPLCRT +S  T  P D + APS+SP+N  +L       
Sbjct: 155 PNCSHLFHIDCIDVWLQNNANCPLCRTRVSCDTSFPPDRVSAPSTSPENLVMLR-----G 214

Query: 220 DEDFVVIELG---GEDEVVSSAGQ----QESTVSREVL---VQQPRCHSPKKFENKVAKP 279
           + ++VVIELG   G D      G+    QE + S  +L    Q     SPKK +      
Sbjct: 215 ENEYVVIELGSSIGSDRDSPRHGRLLTGQERSNSGYLLNENTQNSISPSPKKLDRGGLPR 274

Query: 280 KTRKCHHVSIMGDEGIDI-RVKDDQF-FIQPIRRSFSMDSAANQQLYLTVQMIIHQGRQI 339
           K RK H ++ MGDE IDI R KD+QF  IQPIRRS SMDS+A++QLYL VQ  I + R++
Sbjct: 275 KFRKLHKMTSMGDECIDIRRGKDEQFGSIQPIRRSISMDSSADRQLYLAVQEAIRKNREV 334

Query: 340 T------ESSSSSNAESDSRNRRSFFPFRSGRGLKNAI-LPL 348
                    SSSS   S+S+ +RSFF F S R  +++  LPL
Sbjct: 335 LVVGDGGGCSSSSGNVSNSKVKRSFFSFGSSRRSRSSSKLPL 371

[Close]

BLAST of Lcy02g018170 vs. TAIR 10
Match: AT1G04360.1 (RING/U-box superfamily protein )

HSP 1 Score: 246.1 bits (627), Expect = 4.1e-65
Identity = 160/362 (44.20%), Postives = 206/362 (56.91%), Query Frame = 0


Query: 25  STYQSP-FSTVSDSAS--PILAVAVLSVMGTVFLLLGYYIFISKCCSNWHQFSLLRRFSS 84
           +T+ SP F   S S +  PILA+AV+ ++ T FLL+ YYIF+ KCC NWHQ  + RR   
Sbjct: 24  TTFTSPIFPRTSSSGTNFPILAIAVIGILATAFLLVSYYIFVIKCCLNWHQIDIFRR--- 83

Query: 85  FHTQQHEDPFIALSPTMWNRGLEESMIRQIPAFQFER-------DGEGSGIYGCVVCLSE 144
                 ++P +  SP   NRGL+ES IR IP F+F++       + +      C VCL+E
Sbjct: 84  RRRSSDQNPLMIYSPHEVNRGLDESAIRAIPVFKFKKRDVVAGEEDQSKNSQECSVCLNE 143

Query: 145 FQENEMLRVLPKCSHTFHLDCIDIWLQSNSNCPLCRTSISGTTKPPLDHIVAPSSSPQNS 204
           FQE+E LR++P C H FH+DCIDIWLQ N+NCPLCRTS+S      LD I APSS  +NS
Sbjct: 144 FQEDEKLRIIPNCCHVFHIDCIDIWLQGNANCPLCRTSVSCEASFTLDLISAPSSPRENS 203

Query: 205 ------QLLTNSLMGSDEDFVVIELGGEDEVVSSAGQQESTVSREVLVQQPRCHS----- 264
                  L    ++G D+DFVVIELG      S+   +ES  + + L +Q R  S     
Sbjct: 204 PHSRNRNLEPGLVLGGDDDFVVIELG-----ASNGNNRESVRNIDFLTEQERVTSNEVST 263

Query: 265 ----------PKKFENKVAKPKTRKCHHVSIMGDEGIDIRVKDDQF-FIQPIRRSFSMDS 324
                     P KF N+    K RK H V+ MGDE ID R KD  F  IQPIRRS SMDS
Sbjct: 264 GNSPKSVSPLPIKFGNRGMYKKERKFHKVTSMGDECIDTRGKDGHFGEIQPIRRSISMDS 323

Query: 325 AANQQLYLTVQ-MIIHQGRQIT-----ESSSSSNAESDSRNRRSFFPFRSGRGLK-NAIL 348
           + ++QLYL VQ  I  + RQI      E SSSS   +    +R FF F S R  K ++IL
Sbjct: 324 SVDRQLYLAVQEEISRRNRQIPVAGDGEDSSSSGGGNSRVMKRCFFSFGSSRTSKSSSIL 377

[Close]

BLAST of Lcy02g018170 vs. TAIR 10
Match: AT4G17905.1 (RING/U-box superfamily protein )

HSP 1 Score: 116.7 bits (291), Expect = 3.8e-26
Identity = 75/207 (36.23%), Postives = 111/207 (53.62%), Query Frame = 0


Query: 42  LAVAVLSVMGTVFLLLGYYIFISKCCSN---------WHQFSLLRRFSSFHTQQHEDPFI 101
           L +A+  +  T FLL  YY  +SK C+N           +  ++   +S      +DPF 
Sbjct: 61  LVIAIFGIFATAFLLAAYYTLVSKYCANDTTNEAASESGRSDIILDVNSPERGDQDDPFA 120

Query: 102 ALSPTMWNRGLEESMIRQIPAFQFERDGEGSGIYG--CVVCLSEFQENEMLRVLPKCSHT 161
             S T    GL++++I++I  F+ ++   G  I G  C +CL EF E+E LR+LPKC+HT
Sbjct: 121 LESST---AGLDDTLIKKIGFFKLKKHQNGFKINGTDCSICLGEFNEDESLRLLPKCNHT 180

Query: 162 FHLDCIDIWLQSNSNCPLCRTS-ISGTTKPPLDHIVAPSSSPQNSQLLTNSLMGSDEDFV 221
           FH+ CID WL+S+SNCPLCR   I  TT+ P  H+V       N    T++ +GS E  V
Sbjct: 181 FHVVCIDRWLKSHSNCPLCRAKIIVPTTQQPEHHVVV-----MNLDRFTSN-VGSAEGNV 240

Query: 222 VIELGGEDEVVSSAGQQESTVSREVLV 237
           V++   E+  VS +    S  S   +V
Sbjct: 241 VVDDHREEVSVSISSHHPSWFSAADIV 258

[Close]

BLAST of Lcy02g018170 vs. TAIR 10
Match: AT5G17600.1 (RING/U-box superfamily protein )

HSP 1 Score: 115.9 bits (289), Expect = 6.4e-26
Identity = 66/150 (44.00%), Postives = 90/150 (60.00%), Query Frame = 0


Query: 32  STVSDSASPILAVAVLSVMGTVFLLLGYYIFISKCCSNWHQFSLLRRFSSFHTQQHEDPF 91
           S+ S S SP+L +A++ ++ +  +L+ YY  ISK C   HQ S     +  H    E  F
Sbjct: 48  SSSSSSFSPLL-IALIGILTSALILVSYYTLISKYCHRHHQTSSSETLNLNH--NGEGFF 107

Query: 92  IALSPTMWN-RGLEESMIRQIPAFQFER-DGEGSGIYGCVVCLSEFQENEMLRVLPKCSH 151
            +      N  GL ESMI+ I  ++++  DG   G   C VCLSEF+ENE LR+LPKC+H
Sbjct: 108 SSTQRISTNGDGLNESMIKSITVYKYKSGDGFVDG-SDCSVCLSEFEENESLRLLPKCNH 167

Query: 152 TFHLDCIDIWLQSNSNCPLCRTSISGTTKP 180
            FHL CID WL+S+SNCPLCR  ++G   P
Sbjct: 168 AFHLPCIDTWLKSHSNCPLCRAFVTGVNNP 193

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BLAST of Lcy02g018170 vs. TAIR 10
Match: AT3G03550.1 (RING/U-box superfamily protein )

HSP 1 Score: 110.9 bits (276), Expect = 2.1e-24
Identity = 74/222 (33.33%), Postives = 115/222 (51.80%), Query Frame = 0


Query: 35  SDSASPILAVAVLSVMGTVFLLLGYYIFISKCC------SNWHQFSLLRRFSSFHTQQHE 94
           S   SP+L +A++ ++ + F+L+ YY  ISK C      S+    + + R SS +T Q  
Sbjct: 53  SSDFSPLL-IALIGILASAFILVSYYTLISKYCHRRRHNSSSTSAAAINRISSDYTWQGT 112

Query: 95  DPFIALSPTMWNR--------GLEESMIRQIPAFQFERDGEGSGIYGCVVCLSEFQENEM 154
           +       T  N+        GL+ES+I+ I  +++ +         C VCLSEFQENE 
Sbjct: 113 NNNNNNGATNPNQTIGGGGGDGLDESLIKSITVYKYRKMDGFVESSDCSVCLSEFQENES 172

Query: 155 LRVLPKCSHTFHLDCIDIWLQSNSNCPLCRTSISGTTKPPLDHIVAPSSSPQNSQLLT-- 214
           LR+LPKC+H FH+ CID WL+S+SNCPLCR  I  ++   +  +        N Q++T  
Sbjct: 173 LRLLPKCNHAFHVPCIDTWLKSHSNCPLCRAFIVTSSAVEIVDLT-------NQQIVTEN 232

Query: 215 NSLMGSDEDFVVIELGGEDEVVSSAGQQESTVSREVLVQQPR 241
           NS+   D+  VV+ L  E+    +    E +  +   +Q  R
Sbjct: 233 NSISTGDDSVVVVNLDLENSRSRNETVNEGSTPKPPEMQDSR 266

The following BLAST results are available for this feature:

BLAST of Lcy02g018170 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LSW9	1.2e-64	45.32	RING-H2 finger protein ATL16 OS=Arabidopsis thaliana OX=3702 GN=ATL16 PE=2 SV=1	[more]
P93823	5.8e-64	44.20	RING-H2 finger protein ATL1 OS=Arabidopsis thaliana OX=3702 GN=ATL1 PE=2 SV=1	[more]
P0C041	5.3e-25	36.23	Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana OX=3702 GN=ATL53 P...	[more]
Q9LF64	9.0e-25	44.00	RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1	[more]
Q9SRQ8	2.9e-23	33.33	RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2	[more]

BLAST of Lcy02g018170 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ET78	2.4e-174	87.75	RING-H2 finger protein ATL16-like OS=Cucurbita moschata OX=3662 GN=LOC111437354 ...	[more]
A0A6J1K6J7	4.6e-173	87.46	RING-H2 finger protein ATL16-like OS=Cucurbita maxima OX=3661 GN=LOC111491128 PE...	[more]
A0A0A0L809	1.9e-155	83.10	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G393910 P...	[more]
A0A6J1CXJ5	6.3e-154	91.97	RING-H2 finger protein ATL16-like OS=Momordica charantia OX=3673 GN=LOC111015355...	[more]
A0A5A7T7A7	2.0e-120	87.84	RING-H2 finger protein ATL1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]

BLAST of Lcy02g018170 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023533032.1	1.7e-174	88.03	RING-H2 finger protein ATL16-like [Cucurbita pepo subsp. pepo]	[more]
XP_022931044.1	5.0e-174	87.75	RING-H2 finger protein ATL16-like [Cucurbita moschata]	[more]
KAG6606381.1	4.3e-173	87.46	RING-H2 finger protein ATL16, partial [Cucurbita argyrosperma subsp. sororia] >K...	[more]
XP_022995659.1	9.5e-173	87.46	RING-H2 finger protein ATL16-like [Cucurbita maxima]	[more]
XP_038889009.1	8.1e-164	87.50	RING-H2 finger protein ATL16-like [Benincasa hispida]	[more]

BLAST of Lcy02g018170 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G43420.1	8.3e-66	45.32	RING/U-box superfamily protein	[more]
AT1G04360.1	4.1e-65	44.20	RING/U-box superfamily protein	[more]
AT4G17905.1	3.8e-26	36.23	RING/U-box superfamily protein	[more]
AT5G17600.1	6.4e-26	44.00	RING/U-box superfamily protein	[more]
AT3G03550.1	2.1e-24	33.33	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 128..169 e-value: 1.6E-7 score: 41.0
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 128..170 e-value: 8.3E-13 score: 48.5
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 128..170 score: 12.917115
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 102..178 e-value: 4.0E-22 score: 79.2
None	No IPR available	PIRSR	PIRSR004030-1	PIRSR004030-1	coord: 123..182 e-value: 0.0059 score: 14.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 311..327
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 311..333
None	No IPR available	PANTHER	PTHR46913:SF8	TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED	coord: 1..348
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 128..170 e-value: 1.93252E-17 score: 73.1049
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 127..174
IPR044600	RING-H2 finger protein ATL1/ATL16	PANTHER	PTHR46913	RING-H2 FINGER PROTEIN ATL16	coord: 1..348

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy02g018170.1	Lcy02g018170.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016740	transferase activity