Lcy02g017210 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy02g017210
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Ethylene-responsive transcription factor-like protein
Location	Chr02: 44383012 .. 44387799 (+)
RNA-Seq Expression	Lcy02g017210
Synteny	Lcy02g017210

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCTCATTCAACCTTTCTCTCTCTAAAGCCAAAATTCTTCTCTCTCTATAATCCATTGTAGACCACCACACCACCTGTTCATCACAACCCAATTTACAAAACGGGGATTTCAGAAAGGTGGTAGAGATGATGCATGAGTTAAGAATTTGCTCATAATCTCTTCGCCACCTTCCCTTATCTTCGTAATCTCAATCCCCTTTTGTTCTTTTAATCATTATCCTCCGCCGTGTGCCGCCGCCTCCTCAGGTACGACCGGCAGCTCTCTCTTTCTCTGATCGGCTCTGCTTCGTCTCCGGTCGTCGGCATTCGGCGTTGACGGGCAGAACCGAATGCTGATGAGTTGTTTGCTGTTTTGTTGTTTTGGGTTTCTGAGTTGGCGTCTGTTTCAGTATTGGGTTTGTTTAGATTGGCGTTTGAGGAATTGGGTCTGTGAATTTTTTTGGTCGGTGGGTTGGGTTGACTTGTAGCGAGAAGGATGAGTTTGAGAATTCCCACCACTGAATTTGATAGGTTTTTGTGTTCACATTAGATTTTGAGTTTAACGTTTAGGATGGGAGTTTTAGATATGAATGGAAGAAGAAGAAAGTTTGGTGATTAGATTTAGAGTTGACTTGGACGACTTAAAGATATTTTTTGTTAGTCTATTAACGAGTTGAGCTATATTCAGGTTGGTTCATCAACTTAGATTTGATTAGATTGGAAAGTTTGTAAAGGGAGAGAGCCAAGTTTGATAGTTTTGCTGTGTTTGTGTTTTTTTGCTCAATTCAAGTTGCTATTGGCTGCTAACTGGTTAGCTTTGTACTGCTCTTTATTGCTTCCTGGGTGGTGATAGTTTAAGTTGACATTGGTTTTAGATTATTGATTCACAGTATGAGGCTTGAATTTTGTAGTAGTACCTCATGTTGTGCATGTTAACTTCATTTAGATTGCTTCAGTTGAGAGTCTTGCTAGTTATTTAGAAAACTGAAACTGAAGTTAGAAACTAGTATTTTTTAGTGTAGCTTCTGTTTCCTGACATTGGCTATAAAAGAAGAATTAGATTACATGTGCTCTTCTTCTTCATCTTTGTTTTGTTTTAGAAAATATGAGCTTATTTTGCAATCTTGCATTTGGTTTGAGTTCTCGTGAATGCATGAATCGACATGAAAATAGGTCATCCTTATTGGTCGTTCTCAGAAACTTGCATTCTTTATCACCAGTATGATCGATGCAACCTACCGAACCGTTTCTGCTCTTTGAGCCTTGTCCATTAGTTTATTGTTAGTCATTGAGTAGTTACATGAGAAATTTAAGAGATTTTGGCCAGTGTTTTGAAGATGTCTATTTTCTTCTCATGGAACCTGATTGAGTTTGTTCTGCTTGTCTGGTCCAGATGTGAAGCGATCCAGGAAAAAGAACCAAACGGTACCACTGATAACAAGATTGAAGCTAATTATGGTGAGCTTAAGAAGACGTAAACTCCTGGGACTTTGCACTGGTAAACATTACTTTCTAAAGCTATGGTACTATTGACAAATTGTCATATTTCTTCAATTGGCTCGTAATGGAAGGCTTATACTCATTTTGCTTAGGCTAATTATTTTGTTGAAAGAACTGACTTCTTTTAAAATATATATACATATAGTTTTTCTTTTTTGATTCATGATTTTGAATGAAACTGACTCAGAGGAATTAAAATTATATCACTTATTGATGTGGGATTTGTAGGCAAAGGCTCATTTGTTGCTCCAGTTTCGAAGTTTTCTGAAAATTTGACTGCTGAAGATCACGTGCATTGTACAAACTTCGTTAGTGTCCATCCCATCTGTTCGGACGAAGTTAACAAGATAAAGGAGGTCAGTCTAATTAAGATTTTCAATTTCTTCAATCACAACACAATCACATCATGTTGTTAATAAAAGAACTGGCTACCTTGACTGCTCCTCTTTTAGTACATGGCTAATGTTTTTATGTGGATCTGTCTCCACTTCAATACCATTTATTCTTTCGTTTTCTTTCATAGCTTGATTTTCTGTCAGTTTTTGTACTTTACAATTCTTATCTGAGGCAAAAATAACCTGTAAAATTGCAAAATTACCCAAATTATCCCGAGAGCCAGAATTATGGACATTTGGTTATTGATGTAAGGTTCAGATTTTGGTACATTTTGCAAAACTTGCATCTAATCTGCTTTAAGTTGGCAGGGTGTTACTTAAAAATGTTTTTTTATTACCAAGGAATATATTTAATAAGAAATGATATGAAATGATGATTTGATGACATGAAGTATTCATACTTCCAGTAATCTGCATAATGTTAATCTGGATATAATGATTCATGTTTGAGCACCATTAACTTGACTCTGCCTTTTGATAATGGCCATCATCTCAGTCAGTACTGGTTATAGTTTAGGCCTTAGGGAATGCTACACATGTTCACCATATAAATATTTCCATATATAAAAGAAGACCAATAACTTTTTTCTTTCCTTTCTTTTTTCTCCCAATGCATGAATGTTTTATGTCTCTTAGTACATATCATGGACATTTATGCTGGATACTCATCTCGATAATATGGCGTTTTTCAGAATCCCATTGCAAATATAGAGCCTGAACCATCAAGGGTATCTGTTTTGGATACATCAAAAGAGAAAGTTGATGAGCCAATTGCAGGTTTGTTTGGTCTAAACTATTCCTACATATTTACGAGTTATATGATTGGATATGATATTATTCAGGAATCACCTCCACAAAAAACATTGGATTCCTGTCCTTGGATGGGACATTATTTGTTTGAATATGCTATTGTCCCATCTTCAGAGAGAGAGATGGGGGGGGGGGGGGGGGGAGGAATGCTTTATGCTAGCCAATGAGCTTCCCAAGCAAGTTAGGGATTTTGACAAAATTTCGTTTGCTTGGTTTGCTGTGTATATGGATATTGCTACACTCAATTAGTTAAATTCTTATTCTAGAAAGTAATCGAATTGGCCTACCTGAGCATAGCTCAACGGTAAAGGCATCTTTTCTTCCTCTAGACGGTCATAGGTTGTCATAGGTTTGAATTTCCCCTCCCACATATGATATAATATTCTGAAGAAAGCATGAGTTTGTAAAATGGTCCTTTGGCTGTTTGCTTGTGCGTGAAGTTCTTATTTTGTAAACAATATAGCTTTCTTTTTCCATGTTGCTACCATTCTCAAAATACTATATACCCTCCACAGAGCCTCCGCCCTGGGTTGGACTAATCTAGCAGTTCTACTAAATGAAGGAGACAAAGAAGCTGATTATCATTTCTTCTTTGGCTTATATCTTGCATGCTTTTTGCAAGGAAGATATGAGTTTCTTTTTTCATTGAATTTTCAAGTGATCTTTCTGGTTACAAAGTAGAAAATGTAATTTTAATAACAATTTTCTTGTTGTAACATCCTGAGATGAATCTTTTAGTCTATATTTAGACATAACATATTGACGTGAATTGGTCTAATCTACTCGTACTGTCTGTAGTAATAAATTCATTCTGTTTTATGACTCAAGCTGCTTGCTACTGTATTAGCAGACCTGCCCGTAAAGCGCAGAAAGAGACACCGGAGAAAGAATTTTCCAGATGAACCAAGAGGTGTTTATTTCAAGAACATGAAATGGCAGGCTGCTATAAAGGTTGACAAGAAACAAATACACTTGGGAACTGTAGGATCACAAGAAGAAGCTGCTCATTTGTATGACAGGTAAAATTTCGATTCGATGCGACATAAAGTTCCTACTGATTGATGAATATATAATGGCATTTTGTACATAAGAGAACTTGAAGATTGCTACATTTTAACATGTTTGTGCTTATAAAGTATTTATTATTCCATTTGTACTGCAATGCATTATTCTTTAGCTTTTCAAAAAAAGGGAAAAAAATAGCCAATGAGCTGATCATCAGTCTTTTGCTATCCTAGAGCTGCTTTCATGTGTGGAAGGGAACCCAACTTTGAGCTCCCAGAGGAGGAGAAGAAAGAACTGAGAAAGTTCAATTGGGACGAGTTTTTAGCAATGACTCGCCACGCGATTACTAATAGAAGTAAGTCTCTCCTCTCTACAATTTGGATCATATTCTCAATCTAGATCATATGAGTTATTGATCATCATGTTCTTCAGAACAGAAAAGGCTCAGCCCAGAATCAAAGAAGTCTAAACTTCCTTCGCCGTGGAATGACGACTCGAACAAGAGACATGATGAGTTCAGTGACCTCTCAGCCATAGAAGACGTGGAACCTGTTGCCTCTACCTCCTGAAGACTACAATTCAAGAAGAAAAAGTCTAGTTTTCCTATCTCTAACATCTCAGTTTTAAGTATTGGAGATCTGCAGTTTTGATTTTTTGTTGAAAGGCCTGTGGTTAGGCAAATCAACCTTCTAGAAAATTTGGATGTACATGATTTTAGCGATTTTCGGAAAATCCATCAGGCTTTGAGCCGATCGAAAGAGCGATTTATGGTGACAGTCGATTCAAGAGGGCCCTTTCTGTATCTACTCGTCGATACTTCAAGTCTCCAAGATGCCTTATCTGATGAGATCGAGCTATTGTCCAGACTCGGAATCCATAGCTTCAGCTGTGCCTCGTTGCTTGATGATCTCACATGGTTAAATAGATCTTGATACCTCTTTTAGCCATCTTATGTTCATAGTTAAATGCCTTTATTACTGGTTTCCATTGTTATTATTTTGAGGTCTCCTTGTATCCCTCAATAATTTGACATTTTGTCTCTCTAATCATTTTACTTCTTTTAGGGAAATAAAAGTGGCAAACCAAATGCCAATAAAAT

mRNA sequence

TTCTCATTCAACCTTTCTCTCTCTAAAGCCAAAATTCTTCTCTCTCTATAATCCATTGTAGACCACCACACCACCTGTTCATCACAACCCAATTTACAAAACGGGGATTTCAGAAAGGTGGTAGAGATGATGCATGAGTTAAGAATTTGCTCATAATCTCTTCGCCACCTTCCCTTATCTTCGTAATCTCAATCCCCTTTTGTTCTTTTAATCATTATCCTCCGCCGTGTGCCGCCGCCTCCTCAGATGTGAAGCGATCCAGGAAAAAGAACCAAACGGTACCACTGATAACAAGATTGAAGCTAATTATGGTGAGCTTAAGAAGACGTAAACTCCTGGGACTTTGCACTGGCAAAGGCTCATTTGTTGCTCCAGTTTCGAAGTTTTCTGAAAATTTGACTGCTGAAGATCACGTGCATTGTACAAACTTCGTTAGTGTCCATCCCATCTGTTCGGACGAAGTTAACAAGATAAAGGAGAATCCCATTGCAAATATAGAGCCTGAACCATCAAGGGTATCTGTTTTGGATACATCAAAAGAGAAAGTTGATGAGCCAATTGCAGACCTGCCCGTAAAGCGCAGAAAGAGACACCGGAGAAAGAATTTTCCAGATGAACCAAGAGGTGTTTATTTCAAGAACATGAAATGGCAGGCTGCTATAAAGGTTGACAAGAAACAAATACACTTGGGAACTGTAGGATCACAAGAAGAAGCTGCTCATTTGTATGACAGAGCTGCTTTCATGTGTGGAAGGGAACCCAACTTTGAGCTCCCAGAGGAGGAGAAGAAAGAACTGAGAAAGTTCAATTGGGACGAGTTTTTAGCAATGACTCGCCACGCGATTACTAATAGAAAACAGAAAAGGCTCAGCCCAGAATCAAAGAAGTCTAAACTTCCTTCGCCGTGGAATGACGACTCGAACAAGAGACATGATGAGTTCAGTGACCTCTCAGCCATAGAAGACGTGGAACCTGTTGCCTCTACCTCCTGAAGACTACAATTCAAGAAGAAAAAGTCTAGTTTTCCTATCTCTAACATCTCAGTTTTAAGTATTGGAGATCTGCAGTTTTGATTTTTTGTTGAAAGGCCTGTGGTTAGGCAAATCAACCTTCTAGAAAATTTGGATGTACATGATTTTAGCGATTTTCGGAAAATCCATCAGGCTTTGAGCCGATCGAAAGAGCGATTTATGGTGACAGTCGATTCAAGAGGGCCCTTTCTGTATCTACTCGTCGATACTTCAAGTCTCCAAGATGCCTTATCTGATGAGATCGAGCTATTGTCCAGACTCGGAATCCATAGCTTCAGCTGTGCCTCGTTGCTTGATGATCTCACATGGTTAAATAGATCTTGATACCTCTTTTAGCCATCTTATGTTCATAGTTAAATGCCTTTATTACTGGTTTCCATTGTTATTATTTTGAGGTCTCCTTGTATCCCTCAATAATTTGACATTTTGTCTCTCTAATCATTTTACTTCTTTTAGGGAAATAAAAGTGGCAAACCAAATGCCAATAAAAT

Coding sequence (CDS)

ATGGTGAGCTTAAGAAGACGTAAACTCCTGGGACTTTGCACTGGCAAAGGCTCATTTGTTGCTCCAGTTTCGAAGTTTTCTGAAAATTTGACTGCTGAAGATCACGTGCATTGTACAAACTTCGTTAGTGTCCATCCCATCTGTTCGGACGAAGTTAACAAGATAAAGGAGAATCCCATTGCAAATATAGAGCCTGAACCATCAAGGGTATCTGTTTTGGATACATCAAAAGAGAAAGTTGATGAGCCAATTGCAGACCTGCCCGTAAAGCGCAGAAAGAGACACCGGAGAAAGAATTTTCCAGATGAACCAAGAGGTGTTTATTTCAAGAACATGAAATGGCAGGCTGCTATAAAGGTTGACAAGAAACAAATACACTTGGGAACTGTAGGATCACAAGAAGAAGCTGCTCATTTGTATGACAGAGCTGCTTTCATGTGTGGAAGGGAACCCAACTTTGAGCTCCCAGAGGAGGAGAAGAAAGAACTGAGAAAGTTCAATTGGGACGAGTTTTTAGCAATGACTCGCCACGCGATTACTAATAGAAAACAGAAAAGGCTCAGCCCAGAATCAAAGAAGTCTAAACTTCCTTCGCCGTGGAATGACGACTCGAACAAGAGACATGATGAGTTCAGTGACCTCTCAGCCATAGAAGACGTGGAACCTGTTGCCTCTACCTCCTGA

Protein sequence

MVSLRRRKLLGLCTGKGSFVAPVSKFSENLTAEDHVHCTNFVSVHPICSDEVNKIKENPIANIEPEPSRVSVLDTSKEKVDEPIADLPVKRRKRHRRKNFPDEPRGVYFKNMKWQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEKKELRKFNWDEFLAMTRHAITNRKQKRLSPESKKSKLPSPWNDDSNKRHDEFSDLSAIEDVEPVASTS

Homology

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BLAST of Lcy02g017210 vs. ExPASy Swiss-Prot
Match: Q56XP9 (Ethylene-responsive transcription factor-like protein At4g13040 OS=Arabidopsis thaliana OX=3702 GN=At4g13040 PE=2 SV=2)

HSP 1 Score: 149.8 bits (377), Expect = 3.7e-35
Identity = 102/234 (43.59%), Postives = 131/234 (55.98%), Query Frame = 0


Query: 1   MVSLRRRKLLGLCTGKGSFVAPVSKFSENLTAEDHV-----------------HCTNFVS 60
           MVSLRRR+LLGLC G   +V P+      LTAE+ +                      V 
Sbjct: 1   MVSLRRRRLLGLCCGPNGYVTPL----PFLTAEEMITGIPNPNARAAYNPGPAETVTTVI 60

Query: 61  VHPICSDEVNKIKENPIANIEPEPSRVSVL--DTSKEKVDEPIADLPVKRRKRHRRKNFP 120
           V     +E ++   +   +   + S +S +  D+   K   P      KRRK+HRRK   
Sbjct: 61  VEKKAIEERSRRTRSKHMHFRSDYSDISPVNSDSISPKYQPP------KRRKQHRRKRVH 120

Query: 121 D-EP---RGVYFKNMKWQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPE 180
           + EP   RGVY+KNMKWQAAIKV+KKQIHLGT  SQEEAA LYDRAAFMCGREPNFEL E
Sbjct: 121 NQEPCLMRGVYYKNMKWQAAIKVEKKQIHLGTFSSQEEAARLYDRAAFMCGREPNFELSE 180

Query: 181 EEKKELRKFNWDEFLAMTRHAITNRKQK-RLSPESKKSKLPSPWNDDSNKRHDE 211
           E  +EL++ +W+EFL  TR  ITN+K K R+  E  K     P   +  ++  +
Sbjct: 181 EVIRELKQQSWEEFLNCTRRTITNKKPKSRIEHEDTKINASMPHQPEEEEQDSD 224

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BLAST of Lcy02g017210 vs. ExPASy TrEMBL
Match: A0A0A0LCE7 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G630280 PE=4 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 3.3e-103
Identity = 199/234 (85.04%), Postives = 212/234 (90.60%), Query Frame = 0


Query: 1   MVSLRRRKLLGLCTGKGSFVAPVSKFSENLTAEDHVHCTNFVSVHPICSDEVNKIKENPI 60
           MVSLRRRKLLGL +GK SFVAPV KFSENLTAEDHVHCT+FV V+PICSD+VNKI+ENP 
Sbjct: 1   MVSLRRRKLLGLYSGKASFVAPVLKFSENLTAEDHVHCTSFVRVYPICSDKVNKIEENPT 60

Query: 61  ANIEPEPSRVSVLDTSKEKV----DEPIADLPVKRRKRHRRKNFPDEP---RGVYFKNMK 120
           ANIEPE S VSVLDTSKE++    DEPIAD PVKRRKRHRRK+FPDE    RGVYFKNMK
Sbjct: 61  ANIEPESSGVSVLDTSKEQIDTTNDEPIADPPVKRRKRHRRKHFPDESFLMRGVYFKNMK 120

Query: 121 WQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEKKELRKFNWDEFLA 180
           WQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEK+ELRKFNWDEFLA
Sbjct: 121 WQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEKQELRKFNWDEFLA 180

Query: 181 MTRHAITNRKQKRLSPESKKSKLPSPWNDDSNKRHDEFSDLSAIEDVEPVASTS 228
           MTR+ ITNRKQKRLSPESKKS+L SP NDDSNKRHD+F D S +EDVEPVASTS
Sbjct: 181 MTRNTITNRKQKRLSPESKKSELSSPGNDDSNKRHDKFIDPSFLEDVEPVASTS 234

[Close]

BLAST of Lcy02g017210 vs. ExPASy TrEMBL
Match: A0A6J1DZ33 (ethylene-responsive transcription factor-like protein At4g13040 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111025925 PE=4 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 2.4e-98
Identity = 187/231 (80.95%), Postives = 206/231 (89.18%), Query Frame = 0


Query: 1   MVSLRRRKLLGLCTGKGSFVAPVSKFSENLTAEDHVHCTNFVSVHPICSDEVNKIKENPI 60
           MVSLRRRKLLG C+GKGSF+APV KFSENLT E+ +HCTNFVSVHPICSD++NKIKENPI
Sbjct: 1   MVSLRRRKLLGFCSGKGSFLAPVHKFSENLTTENPIHCTNFVSVHPICSDDINKIKENPI 60

Query: 61  ANIEPE-PSRVSVLDTSKEKVDEPIADLPVKRRKRHRRKNFPDEP---RGVYFKNMKWQA 120
           AN EPE  SRV+VLDTSKEK +E IAD PV+ RKRH RK FPDEP   RGVYFKNMKWQA
Sbjct: 61  ANTEPESSSRVTVLDTSKEKNEESIADPPVQCRKRHWRKRFPDEPFLMRGVYFKNMKWQA 120

Query: 121 AIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEKKELRKFNWDEFLAMTR 180
           AIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGR+PNFELPEEEK+ELRK NWD+FLA+TR
Sbjct: 121 AIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGRKPNFELPEEEKQELRKLNWDQFLAVTR 180

Query: 181 HAITNRKQKRLSPESKKSKLPSPWNDDSNKRHDEFSDLSAIEDVEPVASTS 228
           H ITNRKQKRLSPES KSKLPS  N DS+KRH +FS+LS +ED++P ASTS
Sbjct: 181 HVITNRKQKRLSPESNKSKLPSSGNHDSDKRHGKFSNLSTLEDMKPEASTS 231

[Close]

BLAST of Lcy02g017210 vs. ExPASy TrEMBL
Match: A0A6J1ESB0 (ethylene-responsive transcription factor-like protein At4g13040 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437284 PE=4 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 3.5e-97
Identity = 187/227 (82.38%), Postives = 199/227 (87.67%), Query Frame = 0


Query: 1   MVSLRRRKLLGLCTGKGSFVAPVSKFSENLTAEDHVHCTNFVSVHPICSDEVNKIKENPI 60
           MVSLRRRKLLGLCTGKGSF APVSK SEN TAED  HCTNF+SVHPICS+E N+I+ENP+
Sbjct: 1   MVSLRRRKLLGLCTGKGSFDAPVSKSSENSTAEDLEHCTNFISVHPICSNEFNEIEENPV 60

Query: 61  ANIEPEPSRVSVLDTSKEKVDEPIADLPVKRRKRHRRKNFPDE---PRGVYFKNMKWQAA 120
           AN+E E SRVSVLDTSKEK DEP A+ PVKRRKRHRRK FP+E    RGVYFKNMKWQAA
Sbjct: 61  ANLETESSRVSVLDTSKEKSDEPFAEPPVKRRKRHRRKQFPEECFLMRGVYFKNMKWQAA 120

Query: 121 IKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEKKELRKFNWDEFLAMTRH 180
           IKVDKKQIHLGTV SQEEAAHLYDRAAFMCGREPNFELPE EKKELRKFNWDEFLAMTR 
Sbjct: 121 IKVDKKQIHLGTVESQEEAAHLYDRAAFMCGREPNFELPEAEKKELRKFNWDEFLAMTRL 180

Query: 181 AITNRKQKRLSPESKKSKLPSPWNDDSNKRHDEFSDLSAIEDVEPVA 225
           AI N+KQKR+SPESK SKLP   NDD NKR DEF DLSA ED+EP+A
Sbjct: 181 AIANKKQKRVSPESKNSKLPIVGNDDLNKRQDEFIDLSAPEDIEPLA 227

[Close]

BLAST of Lcy02g017210 vs. ExPASy TrEMBL
Match: A0A6J1EWY2 (ethylene-responsive transcription factor-like protein At4g13040 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111437284 PE=4 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 1.5e-95
Identity = 187/227 (82.38%), Postives = 198/227 (87.22%), Query Frame = 0


Query: 1   MVSLRRRKLLGLCTGKGSFVAPVSKFSENLTAEDHVHCTNFVSVHPICSDEVNKIKENPI 60
           MVSLRRRKLLGLCTGKGSF APVSK SEN TAED  HCTNF+SVHPICS+E N+I ENP+
Sbjct: 1   MVSLRRRKLLGLCTGKGSFDAPVSKSSENSTAEDLEHCTNFISVHPICSNEFNEI-ENPV 60

Query: 61  ANIEPEPSRVSVLDTSKEKVDEPIADLPVKRRKRHRRKNFPDE---PRGVYFKNMKWQAA 120
           AN+E E SRVSVLDTSKEK DEP A+ PVKRRKRHRRK FP+E    RGVYFKNMKWQAA
Sbjct: 61  ANLETESSRVSVLDTSKEKSDEPFAEPPVKRRKRHRRKQFPEECFLMRGVYFKNMKWQAA 120

Query: 121 IKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEKKELRKFNWDEFLAMTRH 180
           IKVDKKQIHLGTV SQEEAAHLYDRAAFMCGREPNFELPE EKKELRKFNWDEFLAMTR 
Sbjct: 121 IKVDKKQIHLGTVESQEEAAHLYDRAAFMCGREPNFELPEAEKKELRKFNWDEFLAMTRL 180

Query: 181 AITNRKQKRLSPESKKSKLPSPWNDDSNKRHDEFSDLSAIEDVEPVA 225
           AI N+KQKR+SPESK SKLP   NDD NKR DEF DLSA ED+EP+A
Sbjct: 181 AIANKKQKRVSPESKNSKLPIVGNDDLNKRQDEFIDLSAPEDIEPLA 226

[Close]

BLAST of Lcy02g017210 vs. ExPASy TrEMBL
Match: A0A1S4E2T2 (ethylene-responsive transcription factor-like protein At4g13040 isoform X6 OS=Cucumis melo OX=3656 GN=LOC103499216 PE=4 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 5.2e-93
Identity = 182/214 (85.05%), Postives = 193/214 (90.19%), Query Frame = 0


Query: 1   MVSLRRRKLLGLCTGKGSFVAPVSKFSENLTAEDHVHCTNFVSVHPICSDEVNKIKENPI 60
           MVSLRRRKLLGL +GK SFVAPV KFSENLTAE HVHCT+ V V+PICSDEVNKI+ENPI
Sbjct: 1   MVSLRRRKLLGLYSGKASFVAPVLKFSENLTAEVHVHCTSSVRVYPICSDEVNKIEENPI 60

Query: 61  ANIEPEPSRVSVLDTSKEKVD----EPIADLPVKRRKRHRRKNFPDEP---RGVYFKNMK 120
           ANIEPE S VSVLDTSKE++D    EPIAD PVKRRKRHRRK+FPDE    RGVYFKNMK
Sbjct: 61  ANIEPESSGVSVLDTSKEQIDTTNGEPIADPPVKRRKRHRRKHFPDESFLMRGVYFKNMK 120

Query: 121 WQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEKKELRKFNWDEFLA 180
           WQAAIKVDKKQIHLGTV SQEEAAHLYDRAAFMCGREPNFELPEEEK+ELRKFNWDEFLA
Sbjct: 121 WQAAIKVDKKQIHLGTVASQEEAAHLYDRAAFMCGREPNFELPEEEKQELRKFNWDEFLA 180

Query: 181 MTRHAITNRKQKRLSPESKKSKLPSPWNDDSNKR 208
           MTR+ ITNRKQKRL+PESKKS+L SP NDDSNKR
Sbjct: 181 MTRNTITNRKQKRLNPESKKSELSSPGNDDSNKR 214

[Close]

BLAST of Lcy02g017210 vs. NCBI nr
Match: XP_038887390.1 (ethylene-responsive transcription factor-like protein At4g13040 isoform X1 [Benincasa hispida] >XP_038887391.1 ethylene-responsive transcription factor-like protein At4g13040 isoform X1 [Benincasa hispida])

HSP 1 Score: 394.8 bits (1013), Expect = 5.0e-106
Identity = 208/237 (87.76%), Postives = 216/237 (91.14%), Query Frame = 0


Query: 1   MVSLRRRKLLGLCTGKGSFVAPVSKFSENLTAEDHVHCTNFVSVHPICSDEVNKIKENPI 60
           MVSLRRRKLLGLCTGKGSFVAPV KFSENLTAEDHVHCTNFVSV+PICSD+VNKIKENPI
Sbjct: 1   MVSLRRRKLLGLCTGKGSFVAPVLKFSENLTAEDHVHCTNFVSVYPICSDQVNKIKENPI 60

Query: 61  ANIEPEPSRVSVLDTSKEK----VDEPI-ADLPVKRRKRHRRKNFPDEP---RGVYFKNM 120
           ANIEPE S VSVLDTS+E+     DEPI AD P+KRRKRHRRK+FPDE    RGVYFKNM
Sbjct: 61  ANIEPESSGVSVLDTSREQNDTTNDEPIAADPPIKRRKRHRRKHFPDESFLMRGVYFKNM 120

Query: 121 KWQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEKKELRKFNWDEFL 180
           KWQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEKKELRKFNWDEFL
Sbjct: 121 KWQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEKKELRKFNWDEFL 180

Query: 181 AMTRHAITNRKQKRLSPESKKSKLPSPWN--DDSNKRHDEFSDLSAIEDVEPVASTS 228
           AMTRHAITNRKQKRLSPES KSKL SP N  DDSNKRHDEF D SA+ED+EPVASTS
Sbjct: 181 AMTRHAITNRKQKRLSPESNKSKLSSPGNDDDDSNKRHDEFIDPSALEDMEPVASTS 237

[Close]

BLAST of Lcy02g017210 vs. NCBI nr
Match: XP_011651656.1 (ethylene-responsive transcription factor-like protein At4g13040 isoform X1 [Cucumis sativus])

HSP 1 Score: 384.4 bits (986), Expect = 6.7e-103
Identity = 199/234 (85.04%), Postives = 212/234 (90.60%), Query Frame = 0


Query: 1   MVSLRRRKLLGLCTGKGSFVAPVSKFSENLTAEDHVHCTNFVSVHPICSDEVNKIKENPI 60
           MVSLRRRKLLGL +GK SFVAPV KFSENLTAEDHVHCT+FV V+PICSD+VNKI+ENP 
Sbjct: 1   MVSLRRRKLLGLYSGKASFVAPVLKFSENLTAEDHVHCTSFVRVYPICSDKVNKIEENPT 60

Query: 61  ANIEPEPSRVSVLDTSKEKV----DEPIADLPVKRRKRHRRKNFPDEP---RGVYFKNMK 120
           ANIEPE S VSVLDTSKE++    DEPIAD PVKRRKRHRRK+FPDE    RGVYFKNMK
Sbjct: 61  ANIEPESSGVSVLDTSKEQIDTTNDEPIADPPVKRRKRHRRKHFPDESFLMRGVYFKNMK 120

Query: 121 WQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEKKELRKFNWDEFLA 180
           WQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEK+ELRKFNWDEFLA
Sbjct: 121 WQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEKQELRKFNWDEFLA 180

Query: 181 MTRHAITNRKQKRLSPESKKSKLPSPWNDDSNKRHDEFSDLSAIEDVEPVASTS 228
           MTR+ ITNRKQKRLSPESKKS+L SP NDDSNKRHD+F D S +EDVEPVASTS
Sbjct: 181 MTRNTITNRKQKRLSPESKKSELSSPGNDDSNKRHDKFIDPSFLEDVEPVASTS 234

[Close]

BLAST of Lcy02g017210 vs. NCBI nr
Match: XP_022159538.1 (ethylene-responsive transcription factor-like protein At4g13040 isoform X1 [Momordica charantia])

HSP 1 Score: 368.2 bits (944), Expect = 5.0e-98
Identity = 187/231 (80.95%), Postives = 206/231 (89.18%), Query Frame = 0


Query: 1   MVSLRRRKLLGLCTGKGSFVAPVSKFSENLTAEDHVHCTNFVSVHPICSDEVNKIKENPI 60
           MVSLRRRKLLG C+GKGSF+APV KFSENLT E+ +HCTNFVSVHPICSD++NKIKENPI
Sbjct: 1   MVSLRRRKLLGFCSGKGSFLAPVHKFSENLTTENPIHCTNFVSVHPICSDDINKIKENPI 60

Query: 61  ANIEPE-PSRVSVLDTSKEKVDEPIADLPVKRRKRHRRKNFPDEP---RGVYFKNMKWQA 120
           AN EPE  SRV+VLDTSKEK +E IAD PV+ RKRH RK FPDEP   RGVYFKNMKWQA
Sbjct: 61  ANTEPESSSRVTVLDTSKEKNEESIADPPVQCRKRHWRKRFPDEPFLMRGVYFKNMKWQA 120

Query: 121 AIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEKKELRKFNWDEFLAMTR 180
           AIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGR+PNFELPEEEK+ELRK NWD+FLA+TR
Sbjct: 121 AIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGRKPNFELPEEEKQELRKLNWDQFLAVTR 180

Query: 181 HAITNRKQKRLSPESKKSKLPSPWNDDSNKRHDEFSDLSAIEDVEPVASTS 228
           H ITNRKQKRLSPES KSKLPS  N DS+KRH +FS+LS +ED++P ASTS
Sbjct: 181 HVITNRKQKRLSPESNKSKLPSSGNHDSDKRHGKFSNLSTLEDMKPEASTS 231

[Close]

BLAST of Lcy02g017210 vs. NCBI nr
Match: XP_022930940.1 (ethylene-responsive transcription factor-like protein At4g13040 isoform X1 [Cucurbita moschata] >XP_022930941.1 ethylene-responsive transcription factor-like protein At4g13040 isoform X1 [Cucurbita moschata] >XP_022930942.1 ethylene-responsive transcription factor-like protein At4g13040 isoform X1 [Cucurbita moschata])

HSP 1 Score: 364.4 bits (934), Expect = 7.2e-97
Identity = 187/227 (82.38%), Postives = 199/227 (87.67%), Query Frame = 0


Query: 1   MVSLRRRKLLGLCTGKGSFVAPVSKFSENLTAEDHVHCTNFVSVHPICSDEVNKIKENPI 60
           MVSLRRRKLLGLCTGKGSF APVSK SEN TAED  HCTNF+SVHPICS+E N+I+ENP+
Sbjct: 1   MVSLRRRKLLGLCTGKGSFDAPVSKSSENSTAEDLEHCTNFISVHPICSNEFNEIEENPV 60

Query: 61  ANIEPEPSRVSVLDTSKEKVDEPIADLPVKRRKRHRRKNFPDE---PRGVYFKNMKWQAA 120
           AN+E E SRVSVLDTSKEK DEP A+ PVKRRKRHRRK FP+E    RGVYFKNMKWQAA
Sbjct: 61  ANLETESSRVSVLDTSKEKSDEPFAEPPVKRRKRHRRKQFPEECFLMRGVYFKNMKWQAA 120

Query: 121 IKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEKKELRKFNWDEFLAMTRH 180
           IKVDKKQIHLGTV SQEEAAHLYDRAAFMCGREPNFELPE EKKELRKFNWDEFLAMTR 
Sbjct: 121 IKVDKKQIHLGTVESQEEAAHLYDRAAFMCGREPNFELPEAEKKELRKFNWDEFLAMTRL 180

Query: 181 AITNRKQKRLSPESKKSKLPSPWNDDSNKRHDEFSDLSAIEDVEPVA 225
           AI N+KQKR+SPESK SKLP   NDD NKR DEF DLSA ED+EP+A
Sbjct: 181 AIANKKQKRVSPESKNSKLPIVGNDDLNKRQDEFIDLSAPEDIEPLA 227

[Close]

BLAST of Lcy02g017210 vs. NCBI nr
Match: XP_031738473.1 (ethylene-responsive transcription factor-like protein At4g13040 isoform X2 [Cucumis sativus])

HSP 1 Score: 362.8 bits (930), Expect = 2.1e-96
Identity = 192/234 (82.05%), Postives = 205/234 (87.61%), Query Frame = 0


Query: 1   MVSLRRRKLLGLCTGKGSFVAPVSKFSENLTAEDHVHCTNFVSVHPICSDEVNKIKENPI 60
           MVSLRRRKLLGL +        V KFSENLTAEDHVHCT+FV V+PICSD+VNKI+ENP 
Sbjct: 1   MVSLRRRKLLGLYS--------VLKFSENLTAEDHVHCTSFVRVYPICSDKVNKIEENPT 60

Query: 61  ANIEPEPSRVSVLDTSKEKV----DEPIADLPVKRRKRHRRKNFPDEP---RGVYFKNMK 120
           ANIEPE S VSVLDTSKE++    DEPIAD PVKRRKRHRRK+FPDE    RGVYFKNMK
Sbjct: 61  ANIEPESSGVSVLDTSKEQIDTTNDEPIADPPVKRRKRHRRKHFPDESFLMRGVYFKNMK 120

Query: 121 WQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEKKELRKFNWDEFLA 180
           WQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEK+ELRKFNWDEFLA
Sbjct: 121 WQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEKQELRKFNWDEFLA 180

Query: 181 MTRHAITNRKQKRLSPESKKSKLPSPWNDDSNKRHDEFSDLSAIEDVEPVASTS 228
           MTR+ ITNRKQKRLSPESKKS+L SP NDDSNKRHD+F D S +EDVEPVASTS
Sbjct: 181 MTRNTITNRKQKRLSPESKKSELSSPGNDDSNKRHDKFIDPSFLEDVEPVASTS 226

[Close]

BLAST of Lcy02g017210 vs. TAIR 10
Match: AT4G13040.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 149.8 bits (377), Expect = 2.6e-36
Identity = 102/234 (43.59%), Postives = 131/234 (55.98%), Query Frame = 0


Query: 1   MVSLRRRKLLGLCTGKGSFVAPVSKFSENLTAEDHV-----------------HCTNFVS 60
           MVSLRRR+LLGLC G   +V P+      LTAE+ +                      V 
Sbjct: 1   MVSLRRRRLLGLCCGPNGYVTPL----PFLTAEEMITGIPNPNARAAYNPGPAETVTTVI 60

Query: 61  VHPICSDEVNKIKENPIANIEPEPSRVSVL--DTSKEKVDEPIADLPVKRRKRHRRKNFP 120
           V     +E ++   +   +   + S +S +  D+   K   P      KRRK+HRRK   
Sbjct: 61  VEKKAIEERSRRTRSKHMHFRSDYSDISPVNSDSISPKYQPP------KRRKQHRRKRVH 120

Query: 121 D-EP---RGVYFKNMKWQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPE 180
           + EP   RGVY+KNMKWQAAIKV+KKQIHLGT  SQEEAA LYDRAAFMCGREPNFEL E
Sbjct: 121 NQEPCLMRGVYYKNMKWQAAIKVEKKQIHLGTFSSQEEAARLYDRAAFMCGREPNFELSE 180

Query: 181 EEKKELRKFNWDEFLAMTRHAITNRKQK-RLSPESKKSKLPSPWNDDSNKRHDE 211
           E  +EL++ +W+EFL  TR  ITN+K K R+  E  K     P   +  ++  +
Sbjct: 181 EVIRELKQQSWEEFLNCTRRTITNKKPKSRIEHEDTKINASMPHQPEEEEQDSD 224

[Close]

BLAST of Lcy02g017210 vs. TAIR 10
Match: AT4G13040.3 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 149.8 bits (377), Expect = 2.6e-36
Identity = 102/234 (43.59%), Postives = 131/234 (55.98%), Query Frame = 0


Query: 1   MVSLRRRKLLGLCTGKGSFVAPVSKFSENLTAEDHV-----------------HCTNFVS 60
           MVSLRRR+LLGLC G   +V P+      LTAE+ +                      V 
Sbjct: 21  MVSLRRRRLLGLCCGPNGYVTPL----PFLTAEEMITGIPNPNARAAYNPGPAETVTTVI 80

Query: 61  VHPICSDEVNKIKENPIANIEPEPSRVSVL--DTSKEKVDEPIADLPVKRRKRHRRKNFP 120
           V     +E ++   +   +   + S +S +  D+   K   P      KRRK+HRRK   
Sbjct: 81  VEKKAIEERSRRTRSKHMHFRSDYSDISPVNSDSISPKYQPP------KRRKQHRRKRVH 140

Query: 121 D-EP---RGVYFKNMKWQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPE 180
           + EP   RGVY+KNMKWQAAIKV+KKQIHLGT  SQEEAA LYDRAAFMCGREPNFEL E
Sbjct: 141 NQEPCLMRGVYYKNMKWQAAIKVEKKQIHLGTFSSQEEAARLYDRAAFMCGREPNFELSE 200

Query: 181 EEKKELRKFNWDEFLAMTRHAITNRKQK-RLSPESKKSKLPSPWNDDSNKRHDE 211
           E  +EL++ +W+EFL  TR  ITN+K K R+  E  K     P   +  ++  +
Sbjct: 201 EVIRELKQQSWEEFLNCTRRTITNKKPKSRIEHEDTKINASMPHQPEEEEQDSD 244

[Close]

BLAST of Lcy02g017210 vs. TAIR 10
Match: AT4G13040.2 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 141.7 bits (356), Expect = 7.1e-34
Identity = 78/132 (59.09%), Postives = 94/132 (71.21%), Query Frame = 0


Query: 84  IADLPVKRRKRHRRKNFPD-EP---RGVYFKNMKWQAAIKVDKKQIHLGTVGSQEEAAHL 143
           I+D P KRRK+HRRK   + EP   RGVY+KNMKWQAAIKV+KKQIHLGT  SQEEAA L
Sbjct: 37  ISDQPPKRRKQHRRKRVHNQEPCLMRGVYYKNMKWQAAIKVEKKQIHLGTFSSQEEAARL 96

Query: 144 YDRAAFMCGREPNFELPEEEKKELRKFNWDEFLAMTRHAITNRKQK-RLSPESKKSKLPS 203
           YDRAAFMCGREPNFEL EE  +EL++ +W+EFL  TR  ITN+K K R+  E  K     
Sbjct: 97  YDRAAFMCGREPNFELSEEVIRELKQQSWEEFLNCTRRTITNKKPKSRIEHEDTKINASM 156

Query: 204 PWNDDSNKRHDE 211
           P   +  ++  +
Sbjct: 157 PHQPEEEEQDSD 168

The following BLAST results are available for this feature:

BLAST of Lcy02g017210 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q56XP9	3.7e-35	43.59	Ethylene-responsive transcription factor-like protein At4g13040 OS=Arabidopsis t...	[more]

BLAST of Lcy02g017210 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LCE7	3.3e-103	85.04	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G630280 PE=...	[more]
A0A6J1DZ33	2.4e-98	80.95	ethylene-responsive transcription factor-like protein At4g13040 isoform X1 OS=Mo...	[more]
A0A6J1ESB0	3.5e-97	82.38	ethylene-responsive transcription factor-like protein At4g13040 isoform X1 OS=Cu...	[more]
A0A6J1EWY2	1.5e-95	82.38	ethylene-responsive transcription factor-like protein At4g13040 isoform X2 OS=Cu...	[more]
A0A1S4E2T2	5.2e-93	85.05	ethylene-responsive transcription factor-like protein At4g13040 isoform X6 OS=Cu...	[more]

BLAST of Lcy02g017210 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038887390.1	5.0e-106	87.76	ethylene-responsive transcription factor-like protein At4g13040 isoform X1 [Beni...	[more]
XP_011651656.1	6.7e-103	85.04	ethylene-responsive transcription factor-like protein At4g13040 isoform X1 [Cucu...	[more]
XP_022159538.1	5.0e-98	80.95	ethylene-responsive transcription factor-like protein At4g13040 isoform X1 [Momo...	[more]
XP_022930940.1	7.2e-97	82.38	ethylene-responsive transcription factor-like protein At4g13040 isoform X1 [Cucu...	[more]
XP_031738473.1	2.1e-96	82.05	ethylene-responsive transcription factor-like protein At4g13040 isoform X2 [Cucu...	[more]

BLAST of Lcy02g017210 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G13040.1	2.6e-36	43.59	Integrase-type DNA-binding superfamily protein	[more]
AT4G13040.3	2.6e-36	43.59	Integrase-type DNA-binding superfamily protein	[more]
AT4G13040.2	7.1e-34	59.09	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 105..160 e-value: 7.3E-4 score: 19.3
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 105..146 e-value: 6.0E-5 score: 23.2
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 105..155 e-value: 5.5E-8 score: 34.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 179..227
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 183..215
None	No IPR available	PANTHER	PTHR32467	AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR	coord: 1..217
None	No IPR available	PANTHER	PTHR32467:SF4	OS02G0499000 PROTEIN	coord: 1..217
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 105..148

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy02g017210.1	Lcy02g017210.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity