Lcy02g017180 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy02g017180
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Spc97 / Spc98 family of spindle pole body (SBP) component
Location	Chr02: 44365705 .. 44368857 (-)
RNA-Seq Expression	Lcy02g017180
Synteny	Lcy02g017180

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCACTCTCACGTGGTTCTTTCTCTCTTTCCGCCGTCACCTCCTCCGTTTCAGTAGCCCAGTGACGCCGCCGTCTCACTGCCGTCGCTGCCGTCGCCGTCGTCTTTCTTCCGCTCGTGCCGCCACAGCCTCCCTCCTGGCGGGTTTGCCCTGATTTTCTACTCCCTCGTTATTACTGGTATTTTCCCAATCTCCATCTATGTATTTCTTCTCACTTGAAAAACACAAACTAGAATTTGTCTAATGAAAGAATGGACGAGTTTGTTTGATTGTTTTTTCAATACCAATAGCCGAATAGCAACGAAAAAGGGAACAGCAACATGAATCAGTCATCCGATTCTCTTTTAATGCATAGCGTCATTGAATGACCGAACAATTTCAGCCTTATATATATTTGGATATTTGTAGATCATAGTTGGGATAAGGCAATGAATGTTTTCTTTTTTTTTTTTAATTGAAATTCTCTCCCTCAATTAACCAATACTATAATCAACGATACTTTGAATTTATGGAAATGAAGTTCATGAATCCAGACATTTTTTATTGGAATATGAATCAATCATGTTGGGAAGTTCAAACCTGATAAAAACATGAGTCCCGACATATTTTTCAATTAAGCATCATGGGTTGGCCTAATGGTGGATAAGGGCCATGGAAAAATAAAGGGTTAGGAAATCAGTTCGCAATCGTTAGGTGGTTGTCCCATGAGATGTGCGCGCAAGCTGGTTTGTACACTCACGGCTATCAAAATATATATATTCCAATTATTCATTAGGAGTAATGAACCAATCACTAAATTCAACTTCTTAATTTCTGGAATTAAGACAAAATGGTATACAATTTACCATCAACGGGTGAACTTGGCACAAAAAGTTTTCCCCTTGTGACTTTTTTATATAGATTAGTGAATTTTGTGAAGTTTTTACTTTTATGTGTATTTAGCAAAAATTGAACCTAAGGTAAAAATTACAACACACATTTAAGTTTAAAGTTTAATTTATCCCTTATTTAGATGCGATTCTTGAAGAAGAATTGAGGAAAGTTGTGGGAACGGGAGATAGAAAGGGGTCGCTACGAAGAGGAATTGAAGTAAGGTAAGGATCTGACATTAGGTTTTTCTTGTGTTACTGTTTGAATTTAGGGAACGAGATCAGAGCAAGTAGATAAAAATTGCTTCTCGTTTGGATAGTAGTTTCCTTTTTTGTTTCCTAAGCCAGGTAGTTTAATCATTGATACTGACGTAGTTTTTGAAAAATCTAATTGCAGAGTTTTTCTCTTTCTCTAGAGTAATTTGGCGAAAGCTATCATTCAATGGAAGAGGCGAAACAAATTTTGAACAGTAACAGAATTGAAGATATCAGTTGGCTTTGTTCACTATCTGAATCAGAGCTTGTAAGTTCTTGTGGAACTATGCTAACTCTTTTGATCGCTCTTATTTTTCGCTATTAGAAAATGTTTGCATAGTCATTGACTCATTGTATAGTGCAAGCTCTGCTTACAAAAATCGATCATTCTTCTTGTGGTTGTTGAATATCTATAAATTTTGTGGAAACTACTACTTGATTCTGATAACGATGGACGATGATATGAGAATCTTCTGCTGTCATTTTCGATCATGCTTATTGACCCTGTATAGTGATCTATGTGGCAGGACATGCTGATTAGCATTAAAACGCTAGTTCTCCAACGTGCAAAAGCAATTGGCCATGAAGATCTAGCTGAGAAATTTGATCTGAAGACACTACGTGCTATTGGTATTTCTGCTTTCTGTGTCGTATTTCTTGTATATGTTTCACTATCTTTGTCTAGAAAGCTGGTGTAAACTCGAACTCTCTAGCATGCATTAGCGTGTACAGCCGCCATGTTGCTTTATTTGTGCTATCTCTGAACAAATATGGCATTTCTGGCCCTATTTATGTAGGGTTTGTTTTGATGGAAAATCTTAGAGAACAACTTAGGGCGACGGGTATTCCAGATCAGTCTCAATCTCCTGCCATAAATGGGTGCAACTTATTAGACAGCAGTCTTGAGAAAGTATTGTCAATTGATGAGATAAAGGCAAGTATCTGTTCTGACAGAAGGAAGAAACCTGGAAAAAGGTTGGTACAAACTACTAGTTATCTGTTGCATTGGGTAACATTAATTGGCTAACATAGCAAAAACCTCATATTGTTGCCTTGTTATTTTGTAACTTTCACATGTATATATTTGTAAAAAGCTCTTTTTGGCAACTACATTGTGGTTTTCATATAAACTTTCATGGTACCACTGATGCATTAGATATGTGTAGTAAATCAATAAGATCATGTCTGTTCCTAATATTTTTGCTTTCAACTCCATGTTATTGTTCTCTCATTTTCTAATTAGAGCTGATTTCTTTCCATTGTTAGTTGCTGAATTACAGCACCAAATAGGAAGTTTGGGAGAACTTACTTTCTCATGGCCTACATTTTTTTTTCTTTTTTGCTGCCTTCCTTGAGTGATTGGGTTCATTCCATTTTATTTTCTATAATATTTCTAGTTGTACTAATTCAAATGCTTTCACTCAAATTCTTTGCTCTGATGCTGAATTTTATTTGAAGAATGAAACTTTTCATTGATAAAATGAAAGGAGACTAAATTTTATTTGAAGATGTTTATGCTTTCGGTACCTTATTATCCCAACTTTAGATAGATGTTCTAAATAATCTGCCTGTTCTTTAAGTGTTGAACAAATTATATCTCTCTCATCGTTTTTTCGCTTCTCCCTCTCTCTTGTTCTAGGCCGCGGGAAAAGGTTGAGTCCAGAAAGAAGAACGACAAGTTTTGAATTAGAAAATACTGCAAGACTTGGCTGTAATCGTATAGCAGCCATGATCATTGCATACAATTTTGTTAGCTTTAATTGTGTAATTGTATGGCGTCAAATTGCTGTTGTCTATCATGTAATAGTATACGAAGCAAAGGAACCATTGTGAATAAAGAAGATTTTATTGATTGTCCATGCTAAAAAACTTTGTCTCTTTATTCTAAACCTACTTTGAGTTGTGAGATTTGATAGATTTCAAGGAAAATTTGAGGAGTTATTATTGATGACTATGATGGTGGAAATTGGAACAACATTATGAATAAAGTTAAGATTTTTTTGTTTGAGTTCAAAAATATTCGAGGGCG

mRNA sequence

TTTCACTCTCACGTGGTTCTTTCTCTCTTTCCGCCGTCACCTCCTCCGTTTCAGTAGCCCAGTGACGCCGCCGTCTCACTGCCGTCGCTGCCGTCGCCGTCGTCTTTCTTCCGCTCGTGCCGCCACAGCCTCCCTCCTGGCGGGTTTGCCCTGATTTTCTACTCCCTCGTTATTACTGATGCGATTCTTGAAGAAGAATTGAGGAAAGTTGTGGGAACGGGAGATAGAAAGGGGTCGCTACGAAGAGGAATTGAAGTAAGAGTTTTTCTCTTTCTCTAGAGTAATTTGGCGAAAGCTATCATTCAATGGAAGAGGCGAAACAAATTTTGAACAGTAACAGAATTGAAGATATCAGTTGGCTTTGTTCACTATCTGAATCAGAGCTTGACATGCTGATTAGCATTAAAACGCTAGTTCTCCAACGTGCAAAAGCAATTGGCCATGAAGATCTAGCTGAGAAATTTGATCTGAAGACACTACGTGCTATTGGGTTTGTTTTGATGGAAAATCTTAGAGAACAACTTAGGGCGACGGGTATTCCAGATCAGTCTCAATCTCCTGCCATAAATGGGTGCAACTTATTAGACAGCAGTCTTGAGAAAGTATTGTCAATTGATGAGATAAAGGCAAGTATCTGTTCTGACAGAAGGAAGAAACCTGGAAAAAGGCCGCGGGAAAAGGTTGAGTCCAGAAAGAAGAACGACAAGTTTTGAATTAGAAAATACTGCAAGACTTGGCTGTAATCGTATAGCAGCCATGATCATTGCATACAATTTTGTTAGCTTTAATTGTGTAATTGTATGGCGTCAAATTGCTGTTGTCTATCATGTAATAGTATACGAAGCAAAGGAACCATTGTGAATAAAGAAGATTTTATTGATTGTCCATGCTAAAAAACTTTGTCTCTTTATTCTAAACCTACTTTGAGTTGTGAGATTTGATAGATTTCAAGGAAAATTTGAGGAGTTATTATTGATGACTATGATGGTGGAAATTGGAACAACATTATGAATAAAGTTAAGATTTTTTTGTTTGAGTTCAAAAATATTCGAGGGCG

Coding sequence (CDS)

ATGGAAGAGGCGAAACAAATTTTGAACAGTAACAGAATTGAAGATATCAGTTGGCTTTGTTCACTATCTGAATCAGAGCTTGACATGCTGATTAGCATTAAAACGCTAGTTCTCCAACGTGCAAAAGCAATTGGCCATGAAGATCTAGCTGAGAAATTTGATCTGAAGACACTACGTGCTATTGGGTTTGTTTTGATGGAAAATCTTAGAGAACAACTTAGGGCGACGGGTATTCCAGATCAGTCTCAATCTCCTGCCATAAATGGGTGCAACTTATTAGACAGCAGTCTTGAGAAAGTATTGTCAATTGATGAGATAAAGGCAAGTATCTGTTCTGACAGAAGGAAGAAACCTGGAAAAAGGCCGCGGGAAAAGGTTGAGTCCAGAAAGAAGAACGACAAGTTTTGA

Protein sequence

MEEAKQILNSNRIEDISWLCSLSESELDMLISIKTLVLQRAKAIGHEDLAEKFDLKTLRAIGFVLMENLREQLRATGIPDQSQSPAINGCNLLDSSLEKVLSIDEIKASICSDRRKKPGKRPREKVESRKKNDKF

Homology

[Close]

BLAST of Lcy02g017180 vs. ExPASy TrEMBL
Match: A0A6J1DR49 (uncharacterized protein LOC111023068 OS=Momordica charantia OX=3673 GN=LOC111023068 PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 5.9e-52
Identity = 109/134 (81.34%), Postives = 122/134 (91.04%), Query Frame = 0


Query: 1   MEEAKQILNSNRIEDISWLCSLSESELDMLISIKTLVLQRAKAIGHEDLAEKFDLKTLRA 60
           MEEAK+IL  NRIED+SWLCSLSESELDMLISIK LVLQRAK IGHE LAEKFDLKTLRA
Sbjct: 1   MEEAKEILKDNRIEDVSWLCSLSESELDMLISIKMLVLQRAKMIGHEALAEKFDLKTLRA 60

Query: 61  IGFVLMENLREQLRATGIPDQSQSPAINGCNLLDSSLEKVLSIDEIKASICSDRRKKPGK 120
           IGF LME+L+ QLRA+ +PDQSQS A+NGCNLLD SLEK+LSIDEI AS+CSDRRKKPGK
Sbjct: 61  IGFALMEHLKGQLRASDVPDQSQSAALNGCNLLDCSLEKILSIDEIMASVCSDRRKKPGK 120

Query: 121 RPREKVESRKKNDK 135
           RPR+K +SR+KN+K
Sbjct: 121 RPRQKADSRQKNEK 134

[Close]

BLAST of Lcy02g017180 vs. ExPASy TrEMBL
Match: A0A6J1ESQ9 (uncharacterized protein LOC111437414 OS=Cucurbita moschata OX=3662 GN=LOC111437414 PE=4 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 2.0e-47
Identity = 104/131 (79.39%), Postives = 114/131 (87.02%), Query Frame = 0


Query: 1   MEEAKQILNSNRIEDISWLCSLSESELDMLISIKTLVLQRAKAIGHEDLAEKFDLKTLRA 60
           MEEAK+IL  NRIEDISWLCSLSESELD LISIK LVLQRAK IGHEDLAEKFDLKTLRA
Sbjct: 1   MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA 60

Query: 61  IGFVLMENLREQLRATGIPDQSQSPAINGCNLLDSSLEKVLSIDEIKASICSDRRKKPGK 120
           IGF+LME+L+ QL  +G+PDQSQ  A+NG NLLDSSLEKVLSID+I ASIC +RRKKPGK
Sbjct: 61  IGFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEKVLSIDDIMASICCERRKKPGK 120

Query: 121 RPREKVESRKK 132
           R R K +SR K
Sbjct: 121 RSRPKADSRPK 131

[Close]

BLAST of Lcy02g017180 vs. ExPASy TrEMBL
Match: A0A6J1K2S6 (uncharacterized protein LOC111491189 OS=Cucurbita maxima OX=3661 GN=LOC111491189 PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 1.3e-46
Identity = 101/131 (77.10%), Postives = 114/131 (87.02%), Query Frame = 0


Query: 1   MEEAKQILNSNRIEDISWLCSLSESELDMLISIKTLVLQRAKAIGHEDLAEKFDLKTLRA 60
           MEEAK+IL  NRIEDISWLCSLSESELD LISIK LVLQRAK IGHEDLAEKFDLKTLRA
Sbjct: 1   MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA 60

Query: 61  IGFVLMENLREQLRATGIPDQSQSPAINGCNLLDSSLEKVLSIDEIKASICSDRRKKPGK 120
           +GF+LME+L+ QL  + +PDQSQ  A+NG NLLDSSLEK+LSID+I ASICS+RRKKPGK
Sbjct: 61  LGFILMEHLKGQLSVSSVPDQSQFSALNGSNLLDSSLEKILSIDDIMASICSERRKKPGK 120

Query: 121 RPREKVESRKK 132
           R R K +SR +
Sbjct: 121 RSRPKADSRPR 131

[Close]

BLAST of Lcy02g017180 vs. ExPASy TrEMBL
Match: A0A1S3BQH9 (uncharacterized protein LOC103492413 OS=Cucumis melo OX=3656 GN=LOC103492413 PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 1.1e-45
Identity = 97/124 (78.23%), Postives = 112/124 (90.32%), Query Frame = 0


Query: 1   MEEAKQILNSNRIEDISWLCSLSESELDMLISIKTLVLQRAKAIGHEDLAEKFDLKTLRA 60
           MEEA +IL +NR+EDISWLCSLSESELD+LISIK LVLQRAKAIGHE+LAEKFDLKTLRA
Sbjct: 1   MEEANEILKNNRVEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRA 60

Query: 61  IGFVLMENLREQLRATGIPDQSQSPAINGCNLLDSSLEKVLSIDEIKASICSDRRKKPGK 120
           IGFVLME+L+ +LR + + D SQS  +N CNLLDS++EK+LSIDEI ASICSDRRKKPGK
Sbjct: 61  IGFVLMEHLKGELRTSDVSDLSQSATLNACNLLDSNVEKILSIDEIMASICSDRRKKPGK 120

Query: 121 RPRE 125
           RPR+
Sbjct: 121 RPRK 124

[Close]

BLAST of Lcy02g017180 vs. ExPASy TrEMBL
Match: A0A0A0KW48 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G166940 PE=3 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 3.1e-45
Identity = 104/135 (77.04%), Postives = 119/135 (88.15%), Query Frame = 0


Query: 1   MEEAKQILNSNRIEDISWLCSLSESELDMLISIKTLVLQRAKAIGHEDLAEKFDLKTLRA 60
           MEEA +IL + RIE ISWLCSLSESELD+LISIK LVLQRAKA+GHE+LAEKFDLK  RA
Sbjct: 180 MEEANEILKNKRIEGISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRA 239

Query: 61  IGFVLMENLREQLRATGIPDQSQSPAINGCNLLDSSLEKVLSIDEIKASICSDRRKKPGK 120
           IGFVLME+L+ +LR + + D SQS A+N CNLLDS+LEK+LSIDEI ASICSDRRKKPGK
Sbjct: 240 IGFVLMEHLKGELRTSDVSDLSQS-ALNACNLLDSNLEKILSIDEIMASICSDRRKKPGK 299

Query: 121 RPREKVESR-KKNDK 135
           RP+EKV+SR KKNDK
Sbjct: 300 RPQEKVDSRYKKNDK 313

[Close]

BLAST of Lcy02g017180 vs. NCBI nr
Match: XP_022156102.1 (uncharacterized protein LOC111023068 [Momordica charantia])

HSP 1 Score: 213.4 bits (542), Expect = 1.2e-51
Identity = 109/134 (81.34%), Postives = 122/134 (91.04%), Query Frame = 0


Query: 1   MEEAKQILNSNRIEDISWLCSLSESELDMLISIKTLVLQRAKAIGHEDLAEKFDLKTLRA 60
           MEEAK+IL  NRIED+SWLCSLSESELDMLISIK LVLQRAK IGHE LAEKFDLKTLRA
Sbjct: 1   MEEAKEILKDNRIEDVSWLCSLSESELDMLISIKMLVLQRAKMIGHEALAEKFDLKTLRA 60

Query: 61  IGFVLMENLREQLRATGIPDQSQSPAINGCNLLDSSLEKVLSIDEIKASICSDRRKKPGK 120
           IGF LME+L+ QLRA+ +PDQSQS A+NGCNLLD SLEK+LSIDEI AS+CSDRRKKPGK
Sbjct: 61  IGFALMEHLKGQLRASDVPDQSQSAALNGCNLLDCSLEKILSIDEIMASVCSDRRKKPGK 120

Query: 121 RPREKVESRKKNDK 135
           RPR+K +SR+KN+K
Sbjct: 121 RPRQKADSRQKNEK 134

[Close]

BLAST of Lcy02g017180 vs. NCBI nr
Match: XP_038902583.1 (uncharacterized protein LOC120089238 [Benincasa hispida] >XP_038902584.1 uncharacterized protein LOC120089238 [Benincasa hispida] >XP_038902585.1 uncharacterized protein LOC120089238 [Benincasa hispida] >XP_038902586.1 uncharacterized protein LOC120089238 [Benincasa hispida] >XP_038902588.1 uncharacterized protein LOC120089238 [Benincasa hispida])

HSP 1 Score: 211.5 bits (537), Expect = 4.6e-51
Identity = 111/135 (82.22%), Postives = 125/135 (92.59%), Query Frame = 0


Query: 1   MEEAKQILNSNRIEDISWLCSLSESELDMLISIKTLVLQRAKAIGHEDLAEKFDLKTLRA 60
           MEEAK+I  SNRIEDISWLCSLSESELDMLISIK LVLQRAK IGHEDLA+KFDLKT+RA
Sbjct: 1   MEEAKEISKSNRIEDISWLCSLSESELDMLISIKMLVLQRAKVIGHEDLAKKFDLKTIRA 60

Query: 61  IGFVLMENLREQLRATGIPDQSQSPAINGCNLLDSSLEKVLSIDEIKASICSDRRKKPGK 120
           IGFVLME+L+ +L+A+ +PD SQS A+NGCNLLDS+LEK+LSIDEI ASICSDRRKKPGK
Sbjct: 61  IGFVLMEHLKGELKASDVPDLSQSAALNGCNLLDSNLEKILSIDEIMASICSDRRKKPGK 120

Query: 121 RPREKVESRKK-NDK 135
           RPREKV+SR+K NDK
Sbjct: 121 RPREKVDSRQKTNDK 135

[Close]

BLAST of Lcy02g017180 vs. NCBI nr
Match: XP_023533769.1 (uncharacterized protein LOC111795522 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 199.9 bits (507), Expect = 1.4e-47
Identity = 104/131 (79.39%), Postives = 115/131 (87.79%), Query Frame = 0


Query: 1   MEEAKQILNSNRIEDISWLCSLSESELDMLISIKTLVLQRAKAIGHEDLAEKFDLKTLRA 60
           MEEAK+IL  NRIEDISWLCSLSESELD LISIK LVLQRAK IGHEDLAEKFDLKTLRA
Sbjct: 1   MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA 60

Query: 61  IGFVLMENLREQLRATGIPDQSQSPAINGCNLLDSSLEKVLSIDEIKASICSDRRKKPGK 120
           IGF+LME+L+ QL  +G+PDQSQ  A+NG NLLDSSLEK+LSID+I ASICS+RRKKPGK
Sbjct: 61  IGFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEKILSIDDIMASICSERRKKPGK 120

Query: 121 RPREKVESRKK 132
           R R K +SR K
Sbjct: 121 RSRPKADSRPK 131

[Close]

BLAST of Lcy02g017180 vs. NCBI nr
Match: KAG6606306.1 (hypothetical protein SDJN03_03623, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 199.5 bits (506), Expect = 1.8e-47
Identity = 104/131 (79.39%), Postives = 115/131 (87.79%), Query Frame = 0


Query: 1   MEEAKQILNSNRIEDISWLCSLSESELDMLISIKTLVLQRAKAIGHEDLAEKFDLKTLRA 60
           MEEAK+IL  NRIEDISWLCSLSESELD LISIK LVLQRAK IGHEDLAEKFDLKTLRA
Sbjct: 1   MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA 60

Query: 61  IGFVLMENLREQLRATGIPDQSQSPAINGCNLLDSSLEKVLSIDEIKASICSDRRKKPGK 120
           +GF+LME+L+ QL  +G+PDQSQ  A+NG NLLDSSLEKVLSID+I ASICS+RRKKPGK
Sbjct: 61  LGFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEKVLSIDDIMASICSERRKKPGK 120

Query: 121 RPREKVESRKK 132
           R R K +SR K
Sbjct: 121 RSRPKADSRPK 131

[Close]

BLAST of Lcy02g017180 vs. NCBI nr
Match: XP_022931147.1 (uncharacterized protein LOC111437414 [Cucurbita moschata] >XP_022931148.1 uncharacterized protein LOC111437414 [Cucurbita moschata])

HSP 1 Score: 198.4 bits (503), Expect = 4.1e-47
Identity = 104/131 (79.39%), Postives = 114/131 (87.02%), Query Frame = 0


Query: 1   MEEAKQILNSNRIEDISWLCSLSESELDMLISIKTLVLQRAKAIGHEDLAEKFDLKTLRA 60
           MEEAK+IL  NRIEDISWLCSLSESELD LISIK LVLQRAK IGHEDLAEKFDLKTLRA
Sbjct: 1   MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA 60

Query: 61  IGFVLMENLREQLRATGIPDQSQSPAINGCNLLDSSLEKVLSIDEIKASICSDRRKKPGK 120
           IGF+LME+L+ QL  +G+PDQSQ  A+NG NLLDSSLEKVLSID+I ASIC +RRKKPGK
Sbjct: 61  IGFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEKVLSIDDIMASICCERRKKPGK 120

Query: 121 RPREKVESRKK 132
           R R K +SR K
Sbjct: 121 RSRPKADSRPK 131

[Close]

BLAST of Lcy02g017180 vs. TAIR 10
Match: AT1G80245.1 (Spc97 / Spc98 family of spindle pole body (SBP) component )

HSP 1 Score: 115.9 bits (289), Expect = 2.5e-26
Identity = 60/130 (46.15%), Postives = 90/130 (69.23%), Query Frame = 0


Query: 1   MEEAKQILNSNRIEDISWLCSLSESELDMLISIKTLVLQRAKAIGHEDLAEKFDLKTLRA 60
           MEE  QIL +NR +D++W CSLSESELD+LIS+K L +QRAK  GH++LA+KFDLK LR+
Sbjct: 1   MEELTQILKNNRTDDLTWFCSLSESELDLLISLKKLAIQRAKISGHQELADKFDLKLLRS 60

Query: 61  IGFVLMENLREQLRATGIPDQSQSPAI-------NGCNLLDSSLEKVLSIDEIKASICSD 120
           +G VLME+ R++++     D S +P++       + CNLL + ++  + I+EI   IC +
Sbjct: 61  LGLVLMEHARKRVQ----NDTSLAPSVVHQLRLLDNCNLLKTHVDDAVDIEEILTQICDN 120

Query: 121 RRKKPGKRPR 124
           + KK  ++ R
Sbjct: 121 KSKKKARKRR 126

[Close]

BLAST of Lcy02g017180 vs. TAIR 10
Match: AT1G80245.2 (Spc97 / Spc98 family of spindle pole body (SBP) component )

HSP 1 Score: 115.9 bits (289), Expect = 2.5e-26
Identity = 60/130 (46.15%), Postives = 90/130 (69.23%), Query Frame = 0


Query: 1   MEEAKQILNSNRIEDISWLCSLSESELDMLISIKTLVLQRAKAIGHEDLAEKFDLKTLRA 60
           MEE  QIL +NR +D++W CSLSESELD+LIS+K L +QRAK  GH++LA+KFDLK LR+
Sbjct: 1   MEELTQILKNNRTDDLTWFCSLSESELDLLISLKKLAIQRAKISGHQELADKFDLKLLRS 60

Query: 61  IGFVLMENLREQLRATGIPDQSQSPAI-------NGCNLLDSSLEKVLSIDEIKASICSD 120
           +G VLME+ R++++     D S +P++       + CNLL + ++  + I+EI   IC +
Sbjct: 61  LGLVLMEHARKRVQ----NDTSLAPSVVHQLRLLDNCNLLKTHVDDAVDIEEILTQICDN 120

Query: 121 RRKKPGKRPR 124
           + KK  ++ R
Sbjct: 121 KSKKKARKRR 126

[Close]

BLAST of Lcy02g017180 vs. TAIR 10
Match: AT1G80245.3 (Spc97 / Spc98 family of spindle pole body (SBP) component )

HSP 1 Score: 115.9 bits (289), Expect = 2.5e-26
Identity = 60/130 (46.15%), Postives = 90/130 (69.23%), Query Frame = 0


Query: 1   MEEAKQILNSNRIEDISWLCSLSESELDMLISIKTLVLQRAKAIGHEDLAEKFDLKTLRA 60
           MEE  QIL +NR +D++W CSLSESELD+LIS+K L +QRAK  GH++LA+KFDLK LR+
Sbjct: 1   MEELTQILKNNRTDDLTWFCSLSESELDLLISLKKLAIQRAKISGHQELADKFDLKLLRS 60

Query: 61  IGFVLMENLREQLRATGIPDQSQSPAI-------NGCNLLDSSLEKVLSIDEIKASICSD 120
           +G VLME+ R++++     D S +P++       + CNLL + ++  + I+EI   IC +
Sbjct: 61  LGLVLMEHARKRVQ----NDTSLAPSVVHQLRLLDNCNLLKTHVDDAVDIEEILTQICDN 120

Query: 121 RRKKPGKRPR 124
           + KK  ++ R
Sbjct: 121 KSKKKARKRR 126

[Close]

BLAST of Lcy02g017180 vs. TAIR 10
Match: AT4G00695.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: microtubule cytoskeleton organization; LOCATED IN: spindle pole, microtubule organizing center; EXPRESSED IN: cotyledon; CONTAINS InterPro DOMAIN/s: Spc97/Spc98 (InterPro:IPR007259); BEST Arabidopsis thaliana protein match is: Spc97 / Spc98 family of spindle pole body (SBP) component (TAIR:AT1G80245.3); Has 27 Blast hits to 27 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 108.2 bits (269), Expect = 5.1e-24
Identity = 63/132 (47.73%), Postives = 90/132 (68.18%), Query Frame = 0


Query: 1   MEEAKQILNSNRIEDISWLCSLSESELDMLISIKTLVLQRAKAIGHEDL-AEKFDLKTLR 60
           MEE  QIL +NR +D++W CSLSESELD+LIS+K LV++RAK  G EDL A+KFDLK LR
Sbjct: 1   MEELSQILKNNRTDDLTWFCSLSESELDLLISLKKLVIRRAKVSGLEDLVADKFDLKMLR 60

Query: 61  AIGFVLMENLREQLRATGIPDQSQSPAI-------NGCNLLDSSLEKVLSIDEIKASICS 120
           ++G VLME +R+++      D S +P++       + CNLL + ++  + I+EI   IC+
Sbjct: 61  SLGLVLMEYVRKRVE----DDTSLAPSVVQELSLLDSCNLLKTHVDDTVDIEEILTDICN 120

Query: 121 DR-RKKPGKRPR 124
            + +KK  KR R
Sbjct: 121 KKSKKKTRKRSR 128

[Close]

BLAST of Lcy02g017180 vs. TAIR 10
Match: AT4G00695.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: microtubule cytoskeleton organization; LOCATED IN: spindle pole, microtubule organizing center; EXPRESSED IN: cotyledon; CONTAINS InterPro DOMAIN/s: Spc97/Spc98 (InterPro:IPR007259); BEST Arabidopsis thaliana protein match is: Spc97 / Spc98 family of spindle pole body (SBP) component (TAIR:AT1G80245.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 108.2 bits (269), Expect = 5.1e-24
Identity = 63/132 (47.73%), Postives = 90/132 (68.18%), Query Frame = 0


Query: 1   MEEAKQILNSNRIEDISWLCSLSESELDMLISIKTLVLQRAKAIGHEDL-AEKFDLKTLR 60
           MEE  QIL +NR +D++W CSLSESELD+LIS+K LV++RAK  G EDL A+KFDLK LR
Sbjct: 1   MEELSQILKNNRTDDLTWFCSLSESELDLLISLKKLVIRRAKVSGLEDLVADKFDLKMLR 60

Query: 61  AIGFVLMENLREQLRATGIPDQSQSPAI-------NGCNLLDSSLEKVLSIDEIKASICS 120
           ++G VLME +R+++      D S +P++       + CNLL + ++  + I+EI   IC+
Sbjct: 61  SLGLVLMEYVRKRVE----DDTSLAPSVVQELSLLDSCNLLKTHVDDTVDIEEILTDICN 120

Query: 121 DR-RKKPGKRPR 124
            + +KK  KR R
Sbjct: 121 KKSKKKTRKRSR 128

The following BLAST results are available for this feature:

BLAST of Lcy02g017180 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy02g017180 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DR49	5.9e-52	81.34	uncharacterized protein LOC111023068 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A6J1ESQ9	2.0e-47	79.39	uncharacterized protein LOC111437414 OS=Cucurbita moschata OX=3662 GN=LOC1114374...	[more]
A0A6J1K2S6	1.3e-46	77.10	uncharacterized protein LOC111491189 OS=Cucurbita maxima OX=3661 GN=LOC111491189...	[more]
A0A1S3BQH9	1.1e-45	78.23	uncharacterized protein LOC103492413 OS=Cucumis melo OX=3656 GN=LOC103492413 PE=...	[more]
A0A0A0KW48	3.1e-45	77.04	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G166940 PE=3 SV=1	[more]

BLAST of Lcy02g017180 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022156102.1	1.2e-51	81.34	uncharacterized protein LOC111023068 [Momordica charantia]	[more]
XP_038902583.1	4.6e-51	82.22	uncharacterized protein LOC120089238 [Benincasa hispida] >XP_038902584.1 unchara...	[more]
XP_023533769.1	1.4e-47	79.39	uncharacterized protein LOC111795522 [Cucurbita pepo subsp. pepo]	[more]
KAG6606306.1	1.8e-47	79.39	hypothetical protein SDJN03_03623, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022931147.1	4.1e-47	79.39	uncharacterized protein LOC111437414 [Cucurbita moschata] >XP_022931148.1 unchar...	[more]

BLAST of Lcy02g017180 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G80245.1	2.5e-26	46.15	Spc97 / Spc98 family of spindle pole body (SBP) component	[more]
AT1G80245.2	2.5e-26	46.15	Spc97 / Spc98 family of spindle pole body (SBP) component	[more]
AT1G80245.3	2.5e-26	46.15	Spc97 / Spc98 family of spindle pole body (SBP) component	[more]
AT4G00695.1	5.1e-24	47.73	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: microtubule cytoskeleton ...	[more]
AT4G00695.2	5.1e-24	47.73	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: microtubule cytoskeleton ...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 113..135
None	No IPR available	PANTHER	PTHR48237	GAMMA-TUBULIN COMPLEX COMPONENT	coord: 1..132

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy02g017180.1	Lcy02g017180.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006869	lipid transport
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0140359	ABC-type transporter activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0005319	lipid transporter activity