Lcy02g016290 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy02g016290
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Ferredoxin
Location	Chr02: 43397519 .. 43400642 (-)
RNA-Seq Expression	Lcy02g016290
Synteny	Lcy02g016290

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATCACTGCACCTTCACACAACTGAACTGAACTCACTCGCCGGAGCGTCAAAAATCAAACCTTACCTATGGACGTTCTTCTCCCCTGCACTTCCTTCCGTTCCGTAAATCTGAAGCCGGAATCCTCCCGGAGATTCCTCTCGCCTAATCGGAACCGTCGCTTTTCCGACCTCTTGAAATGTCGCCGAAAAACGACCTCGACTGAGCTCCAGGCAGCTGTCGACGTCGCCGGCCCGTCCGAAAATGGTTCTGCTTCGATTCCGACTCATAAGGTTACCGTTCACGATAGAGAGAGAGGCGTTGTTCATGAATTCGTTGTTCCTGAGGTACGGCTCCATTTTCAGAGTCCTTTTTTCTTTTCATTTAATTTTGTTTTACGTCCGTGAGATTTGTTTTACGCCTCTTGAACAAGTAAATTTTATCCGATTGTATGTTATGATCTATCTTGTTAGATTAGAAATTGTTGTAGTGTTGGGGATTCGAAGTTTTGAACTCTTTTTTTCATTTTATTGTTTAATGGTTATGACTTATGAGGCGCGGGTAATAAACTAAAAAATTGCAGGATCAATACATATTGCACACTGCCGAAGCTCAGAGCATATCTCTTCCTTTTGCTTGCAGGCACGGTATTGTTCCCTAATTCACCAATTATTGATTAACTTTTCGGATTCTTGTTCTAAGTCATGTTTAGAAGTTATGTTAATGGATAACGCCATTAATAATCGAATATATGGGCGTTGGATCAATAATTTCACTTGTCTGCTGATGATCTGTGTCACTTGAAAGCTGAAATACATCATAAAAATTTATAGTTACTTCTTACGATCGTGGATTTATTAACCCTTAGACTTGTTTATTAGGTATTCTATGGTAAGCATGGGCCCGAAAATGGGATTCTAGTGTCATTCAATAAATTTTGTGCCACGATTTGAAAAAAGTTTCACACACATCTGTAGAATGTCTATCTAGATATCTATACTTTTGATACGTTTCATTGATCCTACATTAGGTGCCTGTCAAAGAATGTAACGGCAGATTCATGTTCACATTGTGTAGAAAACCCGAATAACAGAATGGTTTACGATCAAACAAAAATCATTTCACACTGAAAAAGTAAAACTAAACTTTTTTCCCTCTGCCCTTCCTTCGACTGATACTTCCGCAATGAAGCCATTTTCTGATTCCTTTTGATCTCCGTTATCGGTACATGCCATGTTCTGAAAGTGTTTTATGACAGGTTGTTGCACTAGTTGTGCTGTTCGAATAAAATCAGGCCAAATTAGACAGCCTGAAGCCCTGGGAATATCTGCTGAGTTGAAATCAAAGGCAATTTCTTTTACTTGACTCTAGACTTGATTTTTTTAAATTTTCTTAAATATGAATATTGATTGTGCATTGAGATGTTCCAGTCAAGATTTTACTGTAAACTTTTCGTTCTAGTTATGAATTTGAGTCTGTCATTCTTAGACTTTACCTGGTGAGCATGGCAAGGTTTGGTAGAAGCAAACTACTGCTCATTGAGGATGAGGATAACGTTGTTGAGTTTGTATTCATAGGTTACTGGGTAGGAAAAGGAAGAATAATCAAGAGCTGGTCCTTGAATGTTTTTGTTGTTATTATTTAGTTGCGACTTGGGAGGAGTGGGTGCAGGTCTCACTAGCAGAATATGAAGTTCTTGGCAAAATAGATACAAAAGGATAAAGAAAAAGATTACTGCAATTCAAATCAGTAGTTATAACCATGACAACGTTGTAAACAATAACTGCATTGCCGATTGATATTCCATATTATTCTCTACGCTGCAGGGGTATGCACTTCTTTGCGTAGGTTTTCCAACCTCAGATGTTGAAGTAGAAACGCAAGATGAGGATGAGGTATTGTTTCAAATTTCTGCCACTCCTTAAGTTGAACACTGAAGCCTCTTTCTTTATTTTTATAGTTAGAAGCTTGCCAAGTCTATTTACCCCTTTTTGCTCTCTCAATGAGCCTAATTTTCGTGTTGGCCAATCTTGAATTAAAGTTGGAATTGGTTAAACCAAAATTCTGCTTGTTTGGCATAATTTGATATGTTAGACCTTTTGGAGTTGCTTTGATCATTTTTCATGCAAAGATTCTCTTAATGGAGGAATGGGGTCATCCCTCCAAAATATGAAGTTCAAAGCGTGAAAATGTATAACAAAGTTTTGATCTGTTTGAATCTTTCCATTTAAACAATCCACTACATGCAGGTATATTGGCTTCAATTTGGAAGATATTTTGCTCGGGGACCAATTGTAAGTTCTTTACTTCCTTAGATCTATCAAAATTTACTGGGAGATGACAAATATTGAAAGAAAAAGGAAAGTGTAAATACAAATTGTCTTTGTTGTAAGTTCTTTTAAACATTTTATTCAATTGTCCAGGAGAGAGATGACTATGCTCTGGAGTTGGCCATGGCTGATGAGTAAAACTATTGATCCTGGAGAGGATCTATGAACTGAGACATGAATGTACGAATTCTGTAGAGGAGCATCACTCTGCTCAACTTCATCTTCTTCCTTCATTTGTATGGTTTATGACTGTTAATATCATAGGAGAATGAAACAATTACTACTGTTCTAAGCTTCTCTTCTTTTTCCTGGTTGATGGGAAGTTTGTGTACTCTTAAACACTAAAAATGGAGGCTGTTTATTTTGGAGGAATGCAAATAATTTTGATGGGGGGAGGGGTGTTTTAGTTTTAGGGAAAGCCCAAATCAATTATTTGGACTGTTTAGTTATATTCTTATGCAAAGTCAACTAACCAAGACCTCTCTTTTTGTAGGTCTTTGTTACATCCTCTCATTGTGGATGTGAACTCAAAACTAGTAGATTTTCAGTTCAAGAAATATGTAAGAAAAAAAGCCAGAAGGAGAAAAAATAGAAGGATCAAGAAAGGGCTCCCCAATGATGAAGATTTTAAACTTCTTGTCACCATGTGAAAACTTCCAATTTCTGCATTTTCAATCCTAAATAAACTACAAACCAGAAAGAGCCAATAATAATAATAATTAGAAAAAAAAAAAAAAAAGTAGAGATGCTTGCATCATTCTAGGTTTGGGGGAGGGGAGCAATTGATCCCTACTCTGGTCTTTATCGTAAGTTTAA

mRNA sequence

AATCACTGCACCTTCACACAACTGAACTGAACTCACTCGCCGGAGCGTCAAAAATCAAACCTTACCTATGGACGTTCTTCTCCCCTGCACTTCCTTCCGTTCCGTAAATCTGAAGCCGGAATCCTCCCGGAGATTCCTCTCGCCTAATCGGAACCGTCGCTTTTCCGACCTCTTGAAATGTCGCCGAAAAACGACCTCGACTGAGCTCCAGGCAGCTGTCGACGTCGCCGGCCCGTCCGAAAATGGTTCTGCTTCGATTCCGACTCATAAGGTTACCGTTCACGATAGAGAGAGAGGCGTTGTTCATGAATTCGTTGTTCCTGAGGATCAATACATATTGCACACTGCCGAAGCTCAGAGCATATCTCTTCCTTTTGCTTGCAGGCACGGTTGTTGCACTAGTTGTGCTGTTCGAATAAAATCAGGCCAAATTAGACAGCCTGAAGCCCTGGGAATATCTGCTGAGTTGAAATCAAAGGGGTATGCACTTCTTTGCGTAGGTTTTCCAACCTCAGATGTTGAAGTAGAAACGCAAGATGAGGATGAGGTATATTGGCTTCAATTTGGAAGATATTTTGCTCGGGGACCAATTGAGAGAGATGACTATGCTCTGGAGTTGGCCATGGCTGATGAGTAAAACTATTGATCCTGGAGAGGATCTATGAACTGAGACATGAATGTCTTTGTTACATCCTCTCATTGTGGATGTGAACTCAAAACTAGTAGATTTTCAGTTCAAGAAATATGTAAGAAAAAAAGCCAGAAGGAGAAAAAATAGAAGGATCAAGAAAGGGCTCCCCAATGATGAAGATTTTAAACTTCTTGTCACCATGTGAAAACTTCCAATTTCTGCATTTTCAATCCTAAATAAACTACAAACCAGAAAGAGCCAATAATAATAATAATTAGAAAAAAAAAAAAAAAAGTAGAGATGCTTGCATCATTCTAGGTTTGGGGGAGGGGAGCAATTGATCCCTACTCTGGTCTTTATCGTAAGTTTAA

Coding sequence (CDS)

ATGGACGTTCTTCTCCCCTGCACTTCCTTCCGTTCCGTAAATCTGAAGCCGGAATCCTCCCGGAGATTCCTCTCGCCTAATCGGAACCGTCGCTTTTCCGACCTCTTGAAATGTCGCCGAAAAACGACCTCGACTGAGCTCCAGGCAGCTGTCGACGTCGCCGGCCCGTCCGAAAATGGTTCTGCTTCGATTCCGACTCATAAGGTTACCGTTCACGATAGAGAGAGAGGCGTTGTTCATGAATTCGTTGTTCCTGAGGATCAATACATATTGCACACTGCCGAAGCTCAGAGCATATCTCTTCCTTTTGCTTGCAGGCACGGTTGTTGCACTAGTTGTGCTGTTCGAATAAAATCAGGCCAAATTAGACAGCCTGAAGCCCTGGGAATATCTGCTGAGTTGAAATCAAAGGGGTATGCACTTCTTTGCGTAGGTTTTCCAACCTCAGATGTTGAAGTAGAAACGCAAGATGAGGATGAGGTATATTGGCTTCAATTTGGAAGATATTTTGCTCGGGGACCAATTGAGAGAGATGACTATGCTCTGGAGTTGGCCATGGCTGATGAGTAA

Protein sequence

MDVLLPCTSFRSVNLKPESSRRFLSPNRNRRFSDLLKCRRKTTSTELQAAVDVAGPSENGSASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSKGYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPIERDDYALELAMADE

Homology

[Close]

BLAST of Lcy02g016290 vs. ExPASy Swiss-Prot
Match: Q9C7Y4 (Ferredoxin C 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FDC2 PE=2 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 5.0e-70
Identity = 130/189 (68.78%), Postives = 153/189 (80.95%), Query Frame = 0


Query: 1   MDVLLPCTSFRSVNLKPESSRRFLSPNRNRRFSDLLKCRRKTTSTELQAAVDVAGPSENG 60
           M ++LPCT   S+  K        +   NRR+    +    T + E +  V+V+ PS+ G
Sbjct: 1   MALILPCTFCTSLQKK--------NFPINRRYITNFRRGATTATCEFRIPVEVSTPSDRG 60

Query: 61  SASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSG 120
           S  +P+HKVTVHDR+RGVVHEF VPEDQYILH+AE+Q+ISLPFACRHGCCTSCAVR+KSG
Sbjct: 61  SLVVPSHKVTVHDRQRGVVHEFEVPEDQYILHSAESQNISLPFACRHGCCTSCAVRVKSG 120

Query: 121 QIRQPEALGISAELKSKGYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPIERDDY 180
           ++RQP+ALGISAELKS+GYALLCVGFPTSD+EVETQDEDEVYWLQFGRYFARGPIERDDY
Sbjct: 121 ELRQPQALGISAELKSQGYALLCVGFPTSDLEVETQDEDEVYWLQFGRYFARGPIERDDY 180

Query: 181 ALELAMADE 190
           ALELAM DE
Sbjct: 181 ALELAMGDE 181

[Close]

BLAST of Lcy02g016290 vs. ExPASy Swiss-Prot
Match: P08451 (Ferredoxin-2 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) OX=269084 GN=petF2 PE=3 SV=2)

HSP 1 Score: 99.8 bits (247), Expect = 3.6e-20
Identity = 43/93 (46.24%), Postives = 62/93 (66.67%), Query Frame = 0


Query: 76  RGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSGQIRQPEALGISAELK 135
           +G    F    DQ +L +A+A  + LP +C  G CT+CA RI SG++ QP+A+G+  E  
Sbjct: 11  QGQSQTFTADSDQSVLDSAQAAGVDLPASCLTGVCTTCAARILSGEVDQPDAMGVGPEPA 70

Query: 136 SKGYALLCVGFPTSDVEVETQDEDEVYWLQFGR 169
            +GY LLCV +P SD+++ET  EDE+Y LQFG+
Sbjct: 71  KQGYTLLCVAYPRSDLKIETHKEDELYALQFGQ 103

[Close]

BLAST of Lcy02g016290 vs. ExPASy Swiss-Prot
Match: P0A3C7 (Ferredoxin-1 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=petF PE=1 SV=2)

HSP 1 Score: 92.0 bits (227), Expect = 7.5e-18
Identity = 41/97 (42.27%), Postives = 60/97 (61.86%), Query Frame = 0


Query: 66  THKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSGQIRQP 125
           T KVT+ +   G  HE  VP+D+YIL  AE Q   LPF+CR G C++CA ++ SG + Q 
Sbjct: 3   TFKVTLINEAEGTKHEIEVPDDEYILDAAEEQGYDLPFSCRAGACSTCAGKLVSGTVDQS 62

Query: 126 EALGISAELKSKGYALLCVGFPTSDVEVETQDEDEVY 163
           +   +  +    GY L CV +PTSDV ++T  E+++Y
Sbjct: 63  DQSFLDDDQIEAGYVLTCVAYPTSDVVIQTHKEEDLY 99

[Close]

BLAST of Lcy02g016290 vs. ExPASy Swiss-Prot
Match: P0A3C8 (Ferredoxin-1 OS=Nostoc sp. (strain ATCC 29151 / PCC 7119) OX=1168 GN=petF PE=1 SV=2)

HSP 1 Score: 92.0 bits (227), Expect = 7.5e-18
Identity = 41/97 (42.27%), Postives = 60/97 (61.86%), Query Frame = 0


Query: 66  THKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSGQIRQP 125
           T KVT+ +   G  HE  VP+D+YIL  AE Q   LPF+CR G C++CA ++ SG + Q 
Sbjct: 3   TFKVTLINEAEGTKHEIEVPDDEYILDAAEEQGYDLPFSCRAGACSTCAGKLVSGTVDQS 62

Query: 126 EALGISAELKSKGYALLCVGFPTSDVEVETQDEDEVY 163
           +   +  +    GY L CV +PTSDV ++T  E+++Y
Sbjct: 63  DQSFLDDDQIEAGYVLTCVAYPTSDVVIQTHKEEDLY 99

[Close]

BLAST of Lcy02g016290 vs. ExPASy Swiss-Prot
Match: P00253 (Ferredoxin OS=Desmonostoc muscorum OX=1179 PE=1 SV=2)

HSP 1 Score: 90.9 bits (224), Expect = 1.7e-17
Identity = 40/97 (41.24%), Postives = 60/97 (61.86%), Query Frame = 0


Query: 66  THKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSGQIRQP 125
           T KVT+ +   G  HE  VP+D+YIL  AE +   LPF+CR G C++CA ++ SG + Q 
Sbjct: 3   TFKVTLINEAEGTKHEIEVPDDEYILDAAEEEGYDLPFSCRAGACSTCAGKLVSGTVDQS 62

Query: 126 EALGISAELKSKGYALLCVGFPTSDVEVETQDEDEVY 163
           +   +  +    GY L CV +PTSDV ++T  E+++Y
Sbjct: 63  DQSFLDDDQIEAGYVLTCVAYPTSDVVIQTHKEEDLY 99

[Close]

BLAST of Lcy02g016290 vs. ExPASy TrEMBL
Match: A0A6J1ESD7 (Ferredoxin OS=Cucurbita moschata OX=3662 GN=LOC111437299 PE=3 SV=1)

HSP 1 Score: 367.1 bits (941), Expect = 4.5e-98
Identity = 181/189 (95.77%), Postives = 184/189 (97.35%), Query Frame = 0


Query: 1   MDVLLPCTSFRSVNLKPESSRRFLSPNRNRRFSDLLKCRRKTTSTELQAAVDVAGPSENG 60
           MDVLLPCTSFRSVNLKPESSR FLS NRNRRFSDLLKCRRKT STELQA VDVAG +++G
Sbjct: 1   MDVLLPCTSFRSVNLKPESSRSFLSTNRNRRFSDLLKCRRKTISTELQATVDVAGRTDDG 60

Query: 61  SASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSG 120
           SASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSG
Sbjct: 61  SASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSG 120

Query: 121 QIRQPEALGISAELKSKGYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPIERDDY 180
           QIRQPEALGISAELKSKGYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPIERDDY
Sbjct: 121 QIRQPEALGISAELKSKGYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPIERDDY 180

Query: 181 ALELAMADE 190
           ALELAMADE
Sbjct: 181 ALELAMADE 189

[Close]

BLAST of Lcy02g016290 vs. ExPASy TrEMBL
Match: A0A6J1DQQ0 (Ferredoxin OS=Momordica charantia OX=3673 GN=LOC111022934 PE=3 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 4.9e-97
Identity = 179/189 (94.71%), Postives = 184/189 (97.35%), Query Frame = 0


Query: 1   MDVLLPCTSFRSVNLKPESSRRFLSPNRNRRFSDLLKCRRKTTSTELQAAVDVAGPSENG 60
           MDVLLPCTS RSVN K E SRRFLSPNRNRRFSDLLKCRRKTTSTELQAA+DVAG ++NG
Sbjct: 1   MDVLLPCTSPRSVNWKLECSRRFLSPNRNRRFSDLLKCRRKTTSTELQAAIDVAGRTDNG 60

Query: 61  SASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSG 120
           SASIPTHKVTVHDR+RGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSG
Sbjct: 61  SASIPTHKVTVHDRQRGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSG 120

Query: 121 QIRQPEALGISAELKSKGYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPIERDDY 180
           +IRQPEALGISAELKSKGYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPIERDDY
Sbjct: 121 EIRQPEALGISAELKSKGYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPIERDDY 180

Query: 181 ALELAMADE 190
           ALELAMADE
Sbjct: 181 ALELAMADE 189

[Close]

BLAST of Lcy02g016290 vs. ExPASy TrEMBL
Match: A0A6J1K5R4 (Ferredoxin OS=Cucurbita maxima OX=3661 GN=LOC111491407 PE=3 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 2.5e-96
Identity = 180/189 (95.24%), Postives = 182/189 (96.30%), Query Frame = 0


Query: 1   MDVLLPCTSFRSVNLKPESSRRFLSPNRNRRFSDLLKCRRKTTSTELQAAVDVAGPSENG 60
           MDVLLP TSFRSVNLKPESSR FLS NRNRRFSDLLKCR K  STELQAAVDVAG ++NG
Sbjct: 1   MDVLLPYTSFRSVNLKPESSRSFLSTNRNRRFSDLLKCRPKMISTELQAAVDVAGRTDNG 60

Query: 61  SASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSG 120
           SASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSG
Sbjct: 61  SASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSG 120

Query: 121 QIRQPEALGISAELKSKGYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPIERDDY 180
           QIRQPEALGISAELKSKGYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPIERDDY
Sbjct: 121 QIRQPEALGISAELKSKGYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPIERDDY 180

Query: 181 ALELAMADE 190
           ALELAMADE
Sbjct: 181 ALELAMADE 189

[Close]

BLAST of Lcy02g016290 vs. ExPASy TrEMBL
Match: A0A6J1GKE0 (Ferredoxin OS=Cucurbita moschata OX=3662 GN=LOC111455118 PE=3 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 4.2e-96
Identity = 178/189 (94.18%), Postives = 181/189 (95.77%), Query Frame = 0


Query: 1   MDVLLPCTSFRSVNLKPESSRRFLSPNRNRRFSDLLKCRRKTTSTELQAAVDVAGPSENG 60
           MDVLLPCTSFRSVNLKP S RRF+S NRN RFSD+LKCRRKTTS ELQAAVDVA  +ENG
Sbjct: 1   MDVLLPCTSFRSVNLKPNSFRRFVSTNRNGRFSDILKCRRKTTSAELQAAVDVAVQTENG 60

Query: 61  SASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSG 120
           S SIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSG
Sbjct: 61  SPSIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSG 120

Query: 121 QIRQPEALGISAELKSKGYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPIERDDY 180
           QIRQPEALGISAELKSKGYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPIERDDY
Sbjct: 121 QIRQPEALGISAELKSKGYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPIERDDY 180

Query: 181 ALELAMADE 190
           ALELAMADE
Sbjct: 181 ALELAMADE 189

[Close]

BLAST of Lcy02g016290 vs. ExPASy TrEMBL
Match: A0A6J1I4R5 (Ferredoxin OS=Cucurbita maxima OX=3661 GN=LOC111470650 PE=3 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 2.1e-95
Identity = 176/189 (93.12%), Postives = 181/189 (95.77%), Query Frame = 0


Query: 1   MDVLLPCTSFRSVNLKPESSRRFLSPNRNRRFSDLLKCRRKTTSTELQAAVDVAGPSENG 60
           MDVLLPCTSFRSVNLKP S RRF+S NRN RFSD+LKCRRKTTS ELQAAVDVA  ++NG
Sbjct: 1   MDVLLPCTSFRSVNLKPNSFRRFVSTNRNGRFSDILKCRRKTTSAELQAAVDVAVQTDNG 60

Query: 61  SASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSG 120
           S SIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSG
Sbjct: 61  SPSIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSG 120

Query: 121 QIRQPEALGISAELKSKGYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPIERDDY 180
           QIRQPEALGISAELK+KGYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPIERDDY
Sbjct: 121 QIRQPEALGISAELKAKGYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPIERDDY 180

Query: 181 ALELAMADE 190
           ALELAMADE
Sbjct: 181 ALELAMADE 189

[Close]

BLAST of Lcy02g016290 vs. NCBI nr
Match: XP_022930965.1 (uncharacterized protein LOC111437299 [Cucurbita moschata] >XP_022930966.1 uncharacterized protein LOC111437299 [Cucurbita moschata])

HSP 1 Score: 367.1 bits (941), Expect = 9.2e-98
Identity = 181/189 (95.77%), Postives = 184/189 (97.35%), Query Frame = 0


Query: 1   MDVLLPCTSFRSVNLKPESSRRFLSPNRNRRFSDLLKCRRKTTSTELQAAVDVAGPSENG 60
           MDVLLPCTSFRSVNLKPESSR FLS NRNRRFSDLLKCRRKT STELQA VDVAG +++G
Sbjct: 1   MDVLLPCTSFRSVNLKPESSRSFLSTNRNRRFSDLLKCRRKTISTELQATVDVAGRTDDG 60

Query: 61  SASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSG 120
           SASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSG
Sbjct: 61  SASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSG 120

Query: 121 QIRQPEALGISAELKSKGYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPIERDDY 180
           QIRQPEALGISAELKSKGYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPIERDDY
Sbjct: 121 QIRQPEALGISAELKSKGYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPIERDDY 180

Query: 181 ALELAMADE 190
           ALELAMADE
Sbjct: 181 ALELAMADE 189

[Close]

BLAST of Lcy02g016290 vs. NCBI nr
Match: KAG6606242.1 (AP-2 complex subunit mu, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 367.1 bits (941), Expect = 9.2e-98
Identity = 181/189 (95.77%), Postives = 184/189 (97.35%), Query Frame = 0


Query: 1   MDVLLPCTSFRSVNLKPESSRRFLSPNRNRRFSDLLKCRRKTTSTELQAAVDVAGPSENG 60
           MDVLLPCTSFRSVNLKPESSR FLS NRNRRFSDLLKCRRKT STELQA VDVAG +++G
Sbjct: 684 MDVLLPCTSFRSVNLKPESSRSFLSTNRNRRFSDLLKCRRKTISTELQATVDVAGRTDDG 743

Query: 61  SASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSG 120
           SASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSG
Sbjct: 744 SASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSG 803

Query: 121 QIRQPEALGISAELKSKGYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPIERDDY 180
           QIRQPEALGISAELKSKGYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPIERDDY
Sbjct: 804 QIRQPEALGISAELKSKGYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPIERDDY 863

Query: 181 ALELAMADE 190
           ALELAMADE
Sbjct: 864 ALELAMADE 872

[Close]

BLAST of Lcy02g016290 vs. NCBI nr
Match: XP_022155937.1 (uncharacterized protein LOC111022934 [Momordica charantia])

HSP 1 Score: 363.6 bits (932), Expect = 1.0e-96
Identity = 179/189 (94.71%), Postives = 184/189 (97.35%), Query Frame = 0


Query: 1   MDVLLPCTSFRSVNLKPESSRRFLSPNRNRRFSDLLKCRRKTTSTELQAAVDVAGPSENG 60
           MDVLLPCTS RSVN K E SRRFLSPNRNRRFSDLLKCRRKTTSTELQAA+DVAG ++NG
Sbjct: 1   MDVLLPCTSPRSVNWKLECSRRFLSPNRNRRFSDLLKCRRKTTSTELQAAIDVAGRTDNG 60

Query: 61  SASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSG 120
           SASIPTHKVTVHDR+RGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSG
Sbjct: 61  SASIPTHKVTVHDRQRGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSG 120

Query: 121 QIRQPEALGISAELKSKGYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPIERDDY 180
           +IRQPEALGISAELKSKGYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPIERDDY
Sbjct: 121 EIRQPEALGISAELKSKGYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPIERDDY 180

Query: 181 ALELAMADE 190
           ALELAMADE
Sbjct: 181 ALELAMADE 189

[Close]

BLAST of Lcy02g016290 vs. NCBI nr
Match: XP_038888790.1 (ferredoxin C 2, chloroplastic [Benincasa hispida])

HSP 1 Score: 361.7 bits (927), Expect = 3.9e-96
Identity = 177/189 (93.65%), Postives = 183/189 (96.83%), Query Frame = 0


Query: 1   MDVLLPCTSFRSVNLKPESSRRFLSPNRNRRFSDLLKCRRKTTSTELQAAVDVAGPSENG 60
           MDVLLPCTSF SVNLKPES R+FLS NRNRRFSD+LKCRRKTTSTELQAAVDVA  +++G
Sbjct: 1   MDVLLPCTSFHSVNLKPESFRKFLSTNRNRRFSDILKCRRKTTSTELQAAVDVAARTDDG 60

Query: 61  SASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSG 120
           S SIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSG
Sbjct: 61  SPSIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSG 120

Query: 121 QIRQPEALGISAELKSKGYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPIERDDY 180
           +IRQPEALGISAELKSKGYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPIERDDY
Sbjct: 121 EIRQPEALGISAELKSKGYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPIERDDY 180

Query: 181 ALELAMADE 190
           ALELAMADE
Sbjct: 181 ALELAMADE 189

[Close]

BLAST of Lcy02g016290 vs. NCBI nr
Match: XP_022996089.1 (uncharacterized protein LOC111491407 [Cucurbita maxima] >XP_022996090.1 uncharacterized protein LOC111491407 [Cucurbita maxima])

HSP 1 Score: 361.3 bits (926), Expect = 5.1e-96
Identity = 180/189 (95.24%), Postives = 182/189 (96.30%), Query Frame = 0


Query: 1   MDVLLPCTSFRSVNLKPESSRRFLSPNRNRRFSDLLKCRRKTTSTELQAAVDVAGPSENG 60
           MDVLLP TSFRSVNLKPESSR FLS NRNRRFSDLLKCR K  STELQAAVDVAG ++NG
Sbjct: 1   MDVLLPYTSFRSVNLKPESSRSFLSTNRNRRFSDLLKCRPKMISTELQAAVDVAGRTDNG 60

Query: 61  SASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSG 120
           SASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSG
Sbjct: 61  SASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSG 120

Query: 121 QIRQPEALGISAELKSKGYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPIERDDY 180
           QIRQPEALGISAELKSKGYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPIERDDY
Sbjct: 121 QIRQPEALGISAELKSKGYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPIERDDY 180

Query: 181 ALELAMADE 190
           ALELAMADE
Sbjct: 181 ALELAMADE 189

[Close]

BLAST of Lcy02g016290 vs. TAIR 10
Match: AT1G32550.1 (2Fe-2S ferredoxin-like superfamily protein )

HSP 1 Score: 265.4 bits (677), Expect = 3.5e-71
Identity = 130/189 (68.78%), Postives = 153/189 (80.95%), Query Frame = 0


Query: 1   MDVLLPCTSFRSVNLKPESSRRFLSPNRNRRFSDLLKCRRKTTSTELQAAVDVAGPSENG 60
           M ++LPCT   S+  K        +   NRR+    +    T + E +  V+V+ PS+ G
Sbjct: 1   MALILPCTFCTSLQKK--------NFPINRRYITNFRRGATTATCEFRIPVEVSTPSDRG 60

Query: 61  SASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSG 120
           S  +P+HKVTVHDR+RGVVHEF VPEDQYILH+AE+Q+ISLPFACRHGCCTSCAVR+KSG
Sbjct: 61  SLVVPSHKVTVHDRQRGVVHEFEVPEDQYILHSAESQNISLPFACRHGCCTSCAVRVKSG 120

Query: 121 QIRQPEALGISAELKSKGYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPIERDDY 180
           ++RQP+ALGISAELKS+GYALLCVGFPTSD+EVETQDEDEVYWLQFGRYFARGPIERDDY
Sbjct: 121 ELRQPQALGISAELKSQGYALLCVGFPTSDLEVETQDEDEVYWLQFGRYFARGPIERDDY 180

Query: 181 ALELAMADE 190
           ALELAM DE
Sbjct: 181 ALELAMGDE 181

[Close]

BLAST of Lcy02g016290 vs. TAIR 10
Match: AT1G32550.2 (2Fe-2S ferredoxin-like superfamily protein )

HSP 1 Score: 246.1 bits (627), Expect = 2.2e-65
Identity = 128/205 (62.44%), Postives = 151/205 (73.66%), Query Frame = 0


Query: 1   MDVLLPCTSFRSVNLKPESSRRFLSPNRNRRFSDLLKCRRKTTSTELQAAVDVAGPSENG 60
           M ++LPCT   S+  K        +   NRR+    +    T + E +  V+V+ PS+ G
Sbjct: 1   MALILPCTFCTSLQKK--------NFPINRRYITNFRRGATTATCEFRIPVEVSTPSDRG 60

Query: 61  SASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSG 120
           S  +P+HKVTVHDR+RGVVHEF   EDQYILH+AE+Q+ISLPFACRHGCCTSCAVR+KSG
Sbjct: 61  SLVVPSHKVTVHDRQRGVVHEF---EDQYILHSAESQNISLPFACRHGCCTSCAVRVKSG 120

Query: 121 QIRQPEALGISAELKSK----------------GYALLCVGFPTSDVEVETQDEDEVYWL 180
           ++RQP+ALGISAELKS+                GYALLCVGFPTSD+EVETQDEDEVYWL
Sbjct: 121 ELRQPQALGISAELKSQRISSLDLIQCQKTYLTGYALLCVGFPTSDLEVETQDEDEVYWL 180

Query: 181 QFGRYFARGPIERDDYALELAMADE 190
           QFGRYFARGPIERDDYALELAM DE
Sbjct: 181 QFGRYFARGPIERDDYALELAMGDE 194

[Close]

BLAST of Lcy02g016290 vs. TAIR 10
Match: AT1G10960.1 (ferredoxin 1 )

HSP 1 Score: 77.8 bits (190), Expect = 1.0e-14
Identity = 34/76 (44.74%), Postives = 48/76 (63.16%), Query Frame = 0


Query: 86  EDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSKGYALLCVG 145
           ED Y+L  AE   + LP++CR G C+SCA ++ SG I Q +   +  E  S+GY L CV 
Sbjct: 72  EDVYVLDAAEEAGLDLPYSCRAGSCSSCAGKVVSGSIDQSDQSFLDDEQMSEGYVLTCVA 131

Query: 146 FPTSDVEVETQDEDEV 162
           +PTSDV +ET  E+ +
Sbjct: 132 YPTSDVVIETHKEEAI 147

[Close]

BLAST of Lcy02g016290 vs. TAIR 10
Match: AT2G27510.1 (ferredoxin 3 )

HSP 1 Score: 76.6 bits (187), Expect = 2.3e-14
Identity = 35/86 (40.70%), Postives = 49/86 (56.98%), Query Frame = 0


Query: 77  GVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKS 136
           G   EF V +DQYIL  AE   + LP++CR G C++CA +I SG + Q +   +      
Sbjct: 70  GQEDEFEVQDDQYILDAAEEAGVDLPYSCRAGACSTCAGQIVSGNVDQSDGSFLEDSHLE 129

Query: 137 KGYALLCVGFPTSDVEVETQDEDEVY 163
           KGY L CV +P SD  + T  E E++
Sbjct: 130 KGYVLTCVAYPQSDCVIHTHKETELF 155

[Close]

BLAST of Lcy02g016290 vs. TAIR 10
Match: AT1G60950.1 (2Fe-2S ferredoxin-like superfamily protein )

HSP 1 Score: 73.2 bits (178), Expect = 2.6e-13
Identity = 30/76 (39.47%), Postives = 47/76 (61.84%), Query Frame = 0


Query: 86  EDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSKGYALLCVG 145
           +D Y+L  AE   I LP++CR G C+SCA ++ SG + Q +   +  E   +G+ L C  
Sbjct: 72  DDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQSFLDDEQIGEGFVLTCAA 131

Query: 146 FPTSDVEVETQDEDEV 162
           +PTSDV +ET  E+++
Sbjct: 132 YPTSDVTIETHKEEDI 147

The following BLAST results are available for this feature:

BLAST of Lcy02g016290 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C7Y4	5.0e-70	68.78	Ferredoxin C 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FDC2 PE=2 SV=1	[more]
P08451	3.6e-20	46.24	Ferredoxin-2 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) O...	[more]
P0A3C7	7.5e-18	42.27	Ferredoxin-1 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 G...	[more]
P0A3C8	7.5e-18	42.27	Ferredoxin-1 OS=Nostoc sp. (strain ATCC 29151 / PCC 7119) OX=1168 GN=petF PE=1 S...	[more]
P00253	1.7e-17	41.24	Ferredoxin OS=Desmonostoc muscorum OX=1179 PE=1 SV=2	[more]

BLAST of Lcy02g016290 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ESD7	4.5e-98	95.77	Ferredoxin OS=Cucurbita moschata OX=3662 GN=LOC111437299 PE=3 SV=1	[more]
A0A6J1DQQ0	4.9e-97	94.71	Ferredoxin OS=Momordica charantia OX=3673 GN=LOC111022934 PE=3 SV=1	[more]
A0A6J1K5R4	2.5e-96	95.24	Ferredoxin OS=Cucurbita maxima OX=3661 GN=LOC111491407 PE=3 SV=1	[more]
A0A6J1GKE0	4.2e-96	94.18	Ferredoxin OS=Cucurbita moschata OX=3662 GN=LOC111455118 PE=3 SV=1	[more]
A0A6J1I4R5	2.1e-95	93.12	Ferredoxin OS=Cucurbita maxima OX=3661 GN=LOC111470650 PE=3 SV=1	[more]

BLAST of Lcy02g016290 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022930965.1	9.2e-98	95.77	uncharacterized protein LOC111437299 [Cucurbita moschata] >XP_022930966.1 unchar...	[more]
KAG6606242.1	9.2e-98	95.77	AP-2 complex subunit mu, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022155937.1	1.0e-96	94.71	uncharacterized protein LOC111022934 [Momordica charantia]	[more]
XP_038888790.1	3.9e-96	93.65	ferredoxin C 2, chloroplastic [Benincasa hispida]	[more]
XP_022996089.1	5.1e-96	95.24	uncharacterized protein LOC111491407 [Cucurbita maxima] >XP_022996090.1 uncharac...	[more]

BLAST of Lcy02g016290 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G32550.1	3.5e-71	68.78	2Fe-2S ferredoxin-like superfamily protein	[more]
AT1G32550.2	2.2e-65	62.44	2Fe-2S ferredoxin-like superfamily protein	[more]
AT1G10960.1	1.0e-14	44.74	ferredoxin 1	[more]
AT2G27510.1	2.3e-14	40.70	ferredoxin 3	[more]
AT1G60950.1	2.6e-13	39.47	2Fe-2S ferredoxin-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010241	Ferredoxin [2Fe-2S], plant	TIGRFAM	TIGR02008	TIGR02008	coord: 66..162 e-value: 1.1E-24 score: 84.0
IPR012675	Beta-grasp domain superfamily	GENE3D	3.10.20.30		coord: 64..169 e-value: 2.0E-26 score: 93.6
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PFAM	PF00111	Fer2	coord: 77..147 e-value: 1.1E-12 score: 47.7
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PROSITE	PS51085	2FE2S_FER_2	coord: 67..159 score: 11.249513
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	CDD	cd00207	fer2	coord: 69..154 e-value: 2.21863E-19 score: 76.2796
None	No IPR available	PANTHER	PTHR43112	FERREDOXIN	coord: 25..174
None	No IPR available	PANTHER	PTHR43112:SF10	FERREDOXIN C 2, CHLOROPLASTIC	coord: 25..174
IPR036010	2Fe-2S ferredoxin-like superfamily	SUPERFAMILY	54292	2Fe-2S ferredoxin-like	coord: 57..167

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy02g016290.1	Lcy02g016290.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0009055	electron transfer activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0051536	iron-sulfur cluster binding