Lcy02g014990 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy02g014990
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	E3 ubiquitin-protein ligase RHF1A-like
Location	Chr02: 41525840 .. 41529586 (-)
RNA-Seq Expression	Lcy02g014990
Synteny	Lcy02g014990

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGATTTCAATGCCTCCACTTCTTCTGCCGAGAAGCCTACACTCTCAACTACGACGGTCATGTTTTCTGGCGATGTTGATGATCCTTCCGAAGATGCTTGCAGTATCTGCCTTGAACCTTTCACCTCTCAAGATCCTGCCACTGTAAGCCACTTGCAAATCTACTTCTACTACTGACCTGAAGTTTAATTTTATTGTTATTTTTGTTGTAATTAGCTGCGTTGTGATTTGCGATTTAGTGTCGAGCTTCATGTCGGACTCTTAGCTCTTAGGGCTCCTTGTTTTACTTCCCTGTTCCGGTGAAAGAGTTTTCAGTGGCTAATTTTTCTTAGATTCTTCTGATCGTATTGGTCTTAAACTATAGCAAGAGCTTATTTACTGTGCTGTGTTTGTCCTACTGGTCTCATCCGGTTCTTGATTAATTATTTGATATGTAATCGCTAGATTCTTCGGTCTCGGTTGTCTGTACGCCATGATAAGTGATTCCTCAACTGATGTGGGGTCACTACTTACGTAAAGATTGTTTTCTGTAGTGTGTTTCTATATATATTAATATATTTGTGTGTGGCACTTACATTTAAATGATTCATTGTGTTTACTAATTCTGTATGTAGAAGAATCTTCGAAATGTAATAGCTGGAAAGCTCCATCCTGAATTTCTTTGCTTTTACTGCTCATTCGGGGATGATAGTCTTGTTTTTAACCAAGCTCTTTTTTGAAGTCATGAGGTTAAATTTGTTGACTTTGTAAGATGGCTCATTTCAGATTACTAGTTGCAAGCATGATTACCATCTCCACTGCATTCTCGAATGGTGAGCATAAACCAAATATGGTTTTGTTTTTCGTCCGAGACAAATGTTTCACGTTTGCATAGACTGACATGGTTTACTTCCATTTCTTTTGGGTGGGGGATCCTCTTAGGGCTAAAAGAAGCAACGAGTGCCCAATATGTTCACAGTTACTTTTCATGAAGGACCCTTCTAGGTATGCTACTTTCAAATCATCCCCATCATTCCTTCCTAAACACACAATTTACCACGATCCTCGAATATGGTTATTTTTAATTTTTTTTAATTTTAGTATTTGTTTACTGTAATTTCATTTTTGAAACTTTATAAACTGTTATGACAGTAATCGAAAATTCAACAAAACAAGAATGAAAGAGAGAAGAATAACACAGATTTATGTGGTTTATTAATGGTGTGTTAGGTACATCCACGGACAGGGGGAGAGAGTAGTTTTATTAGTGAGGAGAAATCATATACAGATTACAGAGATTATGGCAGATTAGGTTAAGCGAGATCCCCGTACTTGGTCATTAGGAGCGGTAGATAACAGATTCAAGGCATGTCAACATAAACCTTAGAAGTTTGTTAAATAGAAAAAATTAAAACTAGATTATTGGTAGATCCTTGCCCATTTTGAAGACTAAAAGCCAGACTTTGCCATGGAAATATAAAGGGTCGTATTTTTAGCCCTCAGCCGTATGGAGAGTGGTTGATATTGAGTGAAACATGCGCTTGCATTGGTAGTTTACTAGTTTTAAAAAGTTTAAATTTCTCGTGGTTATATCCCAACTTAACTTGGATGAAATAAAGTGTGGAGAACTATTTTGTTGAACTCTAGGAACTACATTTGATTTTTCCAAATGTTTAATCTTGGAGGTCAAAACTTTTTAATGAGTTCATTACATCTTTACTCTTGTCTAAATATGCATTCCTATCAGTTATCACAATTCACAAAGTAATCACCATATTTACATTTAGTTTGAAAAATGAAAACCGTACTGTTGTTTAATGAAGTGTGTACTTTGTTCCCTTCTAGACTATTCACTTTTTTAGTCTAATTCTACAGCCAAGAACTACTAGTTTCAATGAAGAATGAAAGGTGCTCGAGATCAAGATATACTATTACTACGTCAACCATTCTTAACTTAAACGAGGAACATCTTGGGCAAGTGAGGAATGCTTATCTTCAATTTTATTGCGTATCCTATATTGTTTGCCCAATTAGAGCCGGTCTTCTGAGCATGGGAATTGATTGTTTCAGAATGCTTCCTACTCAGATGACCCTGATTTTCGCGGACGGATTATGCGGCATCTTGCTACTGCAGCAAGCAGAGCTCGTTATCTTCACAGAGCGGACAGGCAGAGACCTTCTGGGCAAGCATTTATGTCGTCCCCTGAAGAGATGTTAGTTTTTGATTCATCAGACGGAAGTTCACGACCTTCTAGATCACTCTCTGAAGATCATTATAGATCTCCATACTCTGTGGCTCCTACCAGTACAGATACAAGCTCTAATCCTTGCACTGGTAGTGAACCAACGATGAAGCCTAGGTTTGTGACAATAGTTTCTATATTATCTCGTTTGTTTTGTGTTTTGTCTGGCATGTCCCGAGTTTTTGCGAATCTTCATCATGCATCTTAAAAGAATTATGGATTCGACATTACCTGCACCTTTGCATGTTGCTAAGGTTGAGTATTGCATTTGCTTATTGCCTGAAATATTGTCTCTTTGTTATACAGAGTTCGTCATTGGCAAGCACCTTCTAACATTACCCGAAGACCTAACGCATGTAAGATCTTCTCCTTCCCAGAGTCTATAAAATTGAAATTTTCTGCCACGTCCTCCAGGTAAAAATGACAGCTTTGCACATCAGCGAACTGATATATGAACATGCTTCAATGTTAGCAGTGCAGAGGCATTGATATGATTCGATTGTTTTGCTATAGATACAAGGAATCTCTTCAAGGTATTAAAGAAAAATTTGTTGCTCGCAGTAGCTTCTTGAAGGGGCTGAGCAAAGGAGTTCAGCGAGAGATAAATGCTGGGATTGCTCGAATTATTGAACGTCTTGATCTCATTGCAAGACGAAGTACTGGTCAAGGATGTGCAGCCAGGGCAGCAAATTCCTTCGAGGGAGTACATGTGCGAGAGAACGTTATTATTGAAGCACCAGCTGTAGAAAATAGAAATGAAGTGTCCGGTTCAAGTTCGAATGCAACCTCAAGCGATTCCTGAACCAATCCAGGATCTGTAGAAGCCAGAAGGTGCATGTGGCATCACCAGGTATGATGCTAGTTGCTAAAATTCTAGAACATGTCATTTCTTAATACAGCTTCAACTTGATATTATGTAAGTTATAAACCAATTAGCAAGGAGTCCTGGCTTTTTAGGGAACTCAGAATTACCAACAAAACAATATGAAATATCCATAGAAGCATAGAAACATTCGTTTCAACTAAATATTTTATGAAAAATATCTTTCTGGCAGGAAGGATACTAACTCCAGGCATTTTAATTCATTCATCCATTGATCTGTACATTATCAATCCAAAATGGGAATGAAGACACATCTAATGCGTGACGTATGAGGGAACAGCCAACGTCCTGTGGGCTTGCGTTCTGCAGTGCCTTTTGCATACTGGCAAGCAAATTTGAATGGCTTCTGTAAGTTATATGCCTTTTTTGCGAAACAAGTAAGACTGATGACAATATTTCTCATACTCTACTCTTTTAACTTTAGCTACCTTGTCCATGCCCCTAAACTGGTCCAAAATATTTTGTAAAATGGAATTGTTTGATTGACTTATTGTTGTGCTAAAACGGAATTGTTTGATTGACTTTGTGTGACTCGTGAATTTTATTTCCTTATTGGAATACATAAATCAAATTTAATCAATTAAAAATTGGCACATTTTCTTTTCTGCATGTTTGAGCTATACCTATGCACACTCCAAC

mRNA sequence

ATGGCGGATTTCAATGCCTCCACTTCTTCTGCCGAGAAGCCTACACTCTCAACTACGACGGTCATGTTTTCTGGCGATGTTGATGATCCTTCCGAAGATGCTTGCAGTATCTGCCTTGAACCTTTCACCTCTCAAGATCCTGCCACTATTACTAGTTGCAAGCATGATTACCATCTCCACTGCATTCTCGAATGGGCTAAAAGAAGCAACGAGTGCCCAATATGTTCACAGTTACTTTTCATGAAGGACCCTTCTAGCCAAGAACTACTAGTTTCAATGAAGAATGAAAGGTGCTCGAGATCAAGATATACTATTACTACGTCAACCATTCTTAACTTAAACGAGGAACATCTTGGGCAAAATGCTTCCTACTCAGATGACCCTGATTTTCGCGGACGGATTATGCGGCATCTTGCTACTGCAGCAAGCAGAGCTCGTTATCTTCACAGAGCGGACAGGCAGAGACCTTCTGGGCAAGCATTTATGTCGTCCCCTGAAGAGATGTTAGTTTTTGATTCATCAGACGGAAGTTCACGACCTTCTAGATCACTCTCTGAAGATCATTATAGATCTCCATACTCTGTGGCTCCTACCAGTACAGATACAAGCTCTAATCCTTGCACTGGTAGTGAACCAACGATGAAGCCTAGAGTTCGTCATTGGCAAGCACCTTCTAACATTACCCGAAGACCTAACGCATTGCAGAGGCATTGATATGATTCGATTGTTTTGCTATAGATACAAGGAATCTCTTCAAGGTATTAAAGAAAAATTTGTTGCTCGCAGTAGCTTCTTGAAGGGGCTGAGCAAAGGAGTTCAGCGAGAGATAAATGCTGGGATTGCTCGAATTATTGAACGTCTTGATCTCATTGCAAGACGAAGTACTGGTCAAGGATGTGCAGCCAGGGCAGCAAATTCCTTCGAGGGAGTACATGTGCGAGAGAACGTTATTATTGAAGCACCAGCTGTAGAAAATAGAAATGAAGTGTCCGGTTCAAGTTCGAATGCAACCTCAAGCGATTCCTGAACCAATCCAGGATCTGTAGAAGCCAGAAGGTGCATGTGGCATCACCAGGAAGGATACTAACTCCAGGCATTTTAATTCATTCATCCATTGATCTGTACATTATCAATCCAAAATGGGAATGAAGACACATCTAATGCGTGACGTATGAGGGAACAGCCAACGTCCTGTGGGCTTGCGTTCTGCAGTGCCTTTTGCATACTGGCAAGCAAATTTGAATGGCTTCTGTAAGTTATATGCCTTTTTTGCGAAACAAGTAAGACTGATGACAATATTTCTCATACTCTACTCTTTTAACTTTAGCTACCTTGTCCATGCCCCTAAACTGGTCCAAAATATTTTGTAAAATGGAATTGTTTGATTGACTTATTGTTGTGCTAAAACGGAATTGTTTGATTGACTTTGTGTGACTCGTGAATTTTATTTCCTTATTGGAATACATAAATCAAATTTAATCAATTAAAAATTGGCACATTTTCTTTTCTGCATGTTTGAGCTATACCTATGCACACTCCAAC

Coding sequence (CDS)

ATGGCGGATTTCAATGCCTCCACTTCTTCTGCCGAGAAGCCTACACTCTCAACTACGACGGTCATGTTTTCTGGCGATGTTGATGATCCTTCCGAAGATGCTTGCAGTATCTGCCTTGAACCTTTCACCTCTCAAGATCCTGCCACTATTACTAGTTGCAAGCATGATTACCATCTCCACTGCATTCTCGAATGGGCTAAAAGAAGCAACGAGTGCCCAATATGTTCACAGTTACTTTTCATGAAGGACCCTTCTAGCCAAGAACTACTAGTTTCAATGAAGAATGAAAGGTGCTCGAGATCAAGATATACTATTACTACGTCAACCATTCTTAACTTAAACGAGGAACATCTTGGGCAAAATGCTTCCTACTCAGATGACCCTGATTTTCGCGGACGGATTATGCGGCATCTTGCTACTGCAGCAAGCAGAGCTCGTTATCTTCACAGAGCGGACAGGCAGAGACCTTCTGGGCAAGCATTTATGTCGTCCCCTGAAGAGATGTTAGTTTTTGATTCATCAGACGGAAGTTCACGACCTTCTAGATCACTCTCTGAAGATCATTATAGATCTCCATACTCTGTGGCTCCTACCAGTACAGATACAAGCTCTAATCCTTGCACTGGTAGTGAACCAACGATGAAGCCTAGAGTTCGTCATTGGCAAGCACCTTCTAACATTACCCGAAGACCTAACGCATTGCAGAGGCATTGA

Protein sequence

MADFNASTSSAEKPTLSTTTVMFSGDVDDPSEDACSICLEPFTSQDPATITSCKHDYHLHCILEWAKRSNECPICSQLLFMKDPSSQELLVSMKNERCSRSRYTITTSTILNLNEEHLGQNASYSDDPDFRGRIMRHLATAASRARYLHRADRQRPSGQAFMSSPEEMLVFDSSDGSSRPSRSLSEDHYRSPYSVAPTSTDTSSNPCTGSEPTMKPRVRHWQAPSNITRRPNALQRH

Homology

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BLAST of Lcy02g014990 vs. ExPASy Swiss-Prot
Match: Q4TU14 (E3 ubiquitin-protein ligase RHF1A OS=Arabidopsis thaliana OX=3702 GN=RHF1A PE=1 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.1e-29
Identity = 72/169 (42.60%), Postives = 105/169 (62.13%), Query Frame = 0


Query: 4   FNASTSSAEKPTL-----STTTVMFSGDVDDPSEDACSICLEPFTSQDPATITSCKHDYH 63
           FN S +S   P +     S++ ++ + D D+ ++DACSICLEPFT QDP+T+TSCKH+YH
Sbjct: 10  FNLSDNSPFNPAIGSSSSSSSALVVASDDDNNTDDACSICLEPFTLQDPSTVTSCKHEYH 69

Query: 64  LHCILEWAKRSNECPICSQLLFMKDPSSQELLVSMKNERCSRSRYTITTSTILNLNEEH- 123
           L CI+EW++RS ECPIC QL  ++DP+SQELL +++ ER  ++R  I++S+ ++++  H 
Sbjct: 70  LQCIIEWSQRSKECPICWQLFVLRDPASQELLAAVEKERLLKTR-NISSSSPISIHHSHD 129

Query: 124 -LGQNASYSDDPDFRGRIMRHLATAASRARYLHRADRQRPSGQAFMSSP 166
                   S    F  + +RHL  AA R   L R D Q  S     S P
Sbjct: 130 DFHSEEEESQFSSFDEQFLRHLTEAAHRRCLLRRRDGQISSSLVSSSDP 177

[Close]

BLAST of Lcy02g014990 vs. ExPASy Swiss-Prot
Match: Q9ZT42 (E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis thaliana OX=3702 GN=RHF2A PE=2 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 3.2e-26
Identity = 78/249 (31.33%), Postives = 125/249 (50.20%), Query Frame = 0


Query: 6   ASTSSAEKPTLSTTTVMFSGDVDDPSEDACSICLEPFTSQDPATITSCKHDYHLHCILEW 65
           A  ++  +  L++      G + D  +DACSICLE F   DP+T+TSCKH+YHL CILEW
Sbjct: 4   AGETTTSEGHLTSAAAFVEGGIQDACDDACSICLESFCESDPSTLTSCKHEYHLQCILEW 63

Query: 66  AKRSNECPICSQLLFMKDPSSQELLVSMKNERCSRSRYTITTS-----TILNLNEEHLGQ 125
            +RS++CP+C Q + +KDP+SQELL +++ ER  R   T   +     T+ +   +HL  
Sbjct: 64  CQRSSQCPMCWQSISLKDPTSQELLEAVEQERNFRFNPTRNATIFRHPTLGDFELQHLPV 123

Query: 126 NASYSDDPDFRGRIMRHLATAASRARYLHRADRQRPSGQAFMSSPEEMLVFDSSDGSSR- 185
                D+ +   RI++HLA AA+  R  H   R+    ++     ++ +VF S   +S  
Sbjct: 124 GV---DNAEIEERIIQHLAAAAAMGRARHGVRREGHRSRSSSQGHQQFMVFSSQPNASSP 183

Query: 186 ----------------------PSRSLSEDHYRS---------PYSVAPTSTDTSSNPCT 218
                                 P  +L E  ++S         P  V+P+++D++S P  
Sbjct: 184 PPHPPMPSSPSQRDESDTVSNLPHNALGEGSHQSNTQPPTSSHPRQVSPSASDSNSRPLN 243

[Close]

BLAST of Lcy02g014990 vs. ExPASy Swiss-Prot
Match: Q8LE94 (E3 ubiquitin-protein ligase At3g02290 OS=Arabidopsis thaliana OX=3702 GN=At3g02290 PE=2 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 3.2e-10
Identity = 23/48 (47.92%), Postives = 33/48 (68.75%), Query Frame = 0


Query: 32  EDACSICLEPFTSQDPATITSCKHDYHLHCILEWAKRSNECPICSQLL 80
           ED C  CLE +TS++P  +T C H +HL CI EW +RS  CP+C +++
Sbjct: 178 EDVCPTCLEEYTSENPKIVTKCSHHFHLSCIYEWMERSENCPVCGKVM 225

[Close]

BLAST of Lcy02g014990 vs. ExPASy Swiss-Prot
Match: Q2HIJ8 (Probable E3 ubiquitin-protein ligase RHB1A OS=Arabidopsis thaliana OX=3702 GN=RHB1A PE=2 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 7.2e-10
Identity = 24/55 (43.64%), Postives = 35/55 (63.64%), Query Frame = 0


Query: 29  DPSEDACSICLEPFTSQDPATITSCKHDYHLHCILEWAKRSNECPICSQLLFMKD 84
           D  ED C IC E +  ++P   T C+H++HL C+LEW +RS+ CPIC + +   D
Sbjct: 133 DEEEDCCPICFEDYDVENPRLTTKCEHEFHLSCLLEWIERSDRCPICDKEVVFDD 187

[Close]

BLAST of Lcy02g014990 vs. ExPASy Swiss-Prot
Match: Q93ZF6 (E3 ubiquitin-protein ligase AIRP1 OS=Arabidopsis thaliana OX=3702 GN=AIRP1 PE=1 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.4e-08
Identity = 23/51 (45.10%), Postives = 32/51 (62.75%), Query Frame = 0


Query: 33  DACSICLEPFTSQDPATITSCKHDYHLHCILEWAKRSNECPICSQLLFMKD 84
           D C ICLE +   +P  +T C HD+HL CIL W +RS  CP+C + L + +
Sbjct: 102 DECPICLEEYEIDNPKLLTKCGHDFHLACILAWMERSEACPVCDKELVLTE 152

[Close]

BLAST of Lcy02g014990 vs. ExPASy TrEMBL
Match: A0A6J1C8W9 (E3 ubiquitin-protein ligase RHF1A-like OS=Momordica charantia OX=3673 GN=LOC111009283 PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 3.7e-65
Identity = 148/234 (63.25%), Postives = 168/234 (71.79%), Query Frame = 0


Query: 1   MADFNASTSSAEKPTLSTTTVMFSGDVDDPSED--ACSICLEPFTSQDPATITSCKHDYH 60
           MADFNA T +    ++ST  V+FSG VDDPSED  +CSICLEPF SQDPA+ITSCKHDYH
Sbjct: 1   MADFNADTPTF---SISTRMVVFSGVVDDPSEDDFSCSICLEPFNSQDPASITSCKHDYH 60

Query: 61  LHCILEWAKRSNECPICSQLLFMKDPSSQELLVSMKNERCSRSRYTITTSTILNLNEEHL 120
           L C+LEWAKRSNECPICS+ L MKDP SQELLVSM+NE  SRS     TSTI   +EE L
Sbjct: 61  LQCVLEWAKRSNECPICSRSLVMKDPISQELLVSMRNESFSRSINPSATSTI---HEEDL 120

Query: 121 GQNASYSDDPDFRGRIMRHLATAASRARYLHRADRQRPSGQAFMSSPEEMLVFDSSDGSS 180
            Q                HLA  A+RA YLH  +R+R SGQ F+SSPEE+LVFDSSD  S
Sbjct: 121 EQ----------------HLAGGANRAHYLHETERRRLSGQEFVSSPEEILVFDSSDRRS 180

Query: 181 RPSRSLSEDHYRSPYSVAPTSTDTSSNPCTGSEPTMKPRVRHWQAPSNITRRPN 233
             S SLSEDHYRSP SVA T+  T+ +P  GSEP MKPRVRHWQAPS+ T+R N
Sbjct: 181 HTSSSLSEDHYRSPSSVASTNAITTFSPYAGSEPVMKPRVRHWQAPSDNTQRTN 212

[Close]

BLAST of Lcy02g014990 vs. ExPASy TrEMBL
Match: A0A7N2LWI5 (RING-type domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.3e-42
Identity = 115/249 (46.18%), Postives = 156/249 (62.65%), Query Frame = 0


Query: 1   MADFNASTSSAEKPTLSTTTVMFSGDVDDPSEDACSICLEPFTSQDPATITSCKHDYHLH 60
           M++ + S+SS+  P +ST +   SG  DD  EDACSICLEPF + DPATITSCKH+YHLH
Sbjct: 1   MSNLSFSSSSSGNPLVSTAS--SSGLNDDVFEDACSICLEPFNTADPATITSCKHEYHLH 60

Query: 61  CILEWAKRSNECPICSQLLFMKDPSSQELLVSMKNERCSRSR--YTITTSTILNLNEE-H 120
           CILEW++RS ECPIC QLL +KDP+SQ LL ++  ERCSRSR   ++  + + +  E+ +
Sbjct: 61  CILEWSQRSKECPICCQLLVLKDPASQALLAAVDIERCSRSRSISSVAPTPLHHFCEDFN 120

Query: 121 LGQNASYSDDPDFRGRIMRHLATAASRARYLHRADRQRPSGQAFMSSPEEMLVFDSSDGS 180
           +  ++SYSDD DF  RIM+HLA AASRARYL R +RQR SG      P E+L+F SS  S
Sbjct: 121 VEHDSSYSDDSDFDDRIMQHLAAAASRARYLRRRERQRASG----LGPSELLIFTSSSSS 180

Query: 181 SRPSRSLSED----HYRSP-------YSVAPTST---DTSSNPCTGSEPTMKPRVRHWQA 233
            + + +  ED     Y SP        +V P S+   +  S      +   +P V + Q 
Sbjct: 181 QQTNVTSPEDFQNLSYGSPEGSPTSGVNVQPQSSVVVNLGSTTAVNRDIPSRPSVVYSQP 240

[Close]

BLAST of Lcy02g014990 vs. ExPASy TrEMBL
Match: A0A2I4GSJ3 (E3 ubiquitin-protein ligase RHF1A OS=Juglans regia OX=51240 GN=LOC109010471 PE=4 SV=2)

HSP 1 Score: 175.6 bits (444), Expect = 2.4e-40
Identity = 110/255 (43.14%), Postives = 155/255 (60.78%), Query Frame = 0


Query: 1   MADFNASTSSAEKPTLSTTTVMFSGDVDDPSEDACSICLEPFTSQDPATITSCKHDYHLH 60
           +A  ++ +SS + P +S  +   SG  DD  E++CSICLEPF + DPATITSCKH+YHLH
Sbjct: 4   IAPSSSPSSSLQNPVVSAAS-SSSGVPDDAFEESCSICLEPFIAADPATITSCKHEYHLH 63

Query: 61  CILEWAKRSNECPICSQLLFMKDPSSQELLVSMKNERCSRSR--YTITTSTILNLNEE-H 120
           CILEW++RS ECPIC QLL +KDP+SQELL +++ ER SRSR  Y+   + + N +E+  
Sbjct: 64  CILEWSQRSKECPICCQLLVLKDPASQELLAAVEIERRSRSRNIYSSAPTALHNFHEDFD 123

Query: 121 LGQNASYSDDPDFRGRIMRHLATAASRARYLHRADRQRPSG-----------------QA 180
           +  +  YS+D DF  RIM+ L+ AASRARY+HR +R R SG                 Q 
Sbjct: 124 VEHDTYYSEDSDFDERIMQRLSAAASRARYIHRRERHRSSGLGPSQVLAFTSPANMSPQT 183

Query: 181 FMSSPEEM--LVFDSSDGSSRPSRSLSEDHYRSPYSVAPTSTDTSSNPCTGSEPTMKPRV 234
           +M+SPE+   L + S +G S  S   S  ++R P +V     D   +     +  + PR+
Sbjct: 184 YMTSPEDYPNLSYGSPEGGSPSSGMPSAINFRPPGAV---DVDLVPSTYLNRDNPVNPRI 243

[Close]

BLAST of Lcy02g014990 vs. ExPASy TrEMBL
Match: A0A371IBL0 (E3 ubiquitin-protein ligase RHF1A (Fragment) OS=Mucuna pruriens OX=157652 GN=RHF1A PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 1.6e-39
Identity = 118/259 (45.56%), Postives = 154/259 (59.46%), Query Frame = 0


Query: 5   NASTSSAEKPTLS-TTTVMFSGDVDDPSEDACSICLEPFTSQDPATITSCKHDYHLHCIL 64
           N ++SS   P++S  ++   S   DD SEDACSICLEPF + DPATITSCKH+YHLHCIL
Sbjct: 3   NFTSSSPLPPSMSHISSPSSSAAFDDSSEDACSICLEPFGTDDPATITSCKHEYHLHCIL 62

Query: 65  EWAKRSNECPICSQLLFMKDPSSQELLVSMKNERCSRSR------YTITTSTILNLNEEH 124
           EW++RS ECPIC QLL +KDP+SQELL +++ E+C  SR      +T +   +  LN +H
Sbjct: 63  EWSQRSKECPICWQLLILKDPASQELLAAVEAEKCLTSRTVYSHAFTNSRIPLERLNNDH 122

Query: 125 ----LGQNASYSDDPDFRGRIMRHLATAASRARYLHRADRQRPSGQAFMSSPEEMLVFDS 184
               L Q+ S SDD DF  ++M+HL  AASRARY+ R +RQR SG    + P E+LVF+S
Sbjct: 123 RQIILLQDDSCSDDSDFDEQLMQHLVAAASRARYICRRERQRSSG----AGPSEVLVFNS 182

Query: 185 S--------------DGSSRPSRSL--SEDHYRSP----YSVAPTSTDTSSNPCTGSEPT 233
           S               G S P+  +  S+ H + P     SV   ST+TSS     S+  
Sbjct: 183 SMHALGMQPTLTTPPSGGSSPTSGVPFSDAHNQPPTPAFSSVGMVSTNTSSE----SDIP 242

[Close]

BLAST of Lcy02g014990 vs. ExPASy TrEMBL
Match: A0A6P5X3S1 (E3 ubiquitin-protein ligase RHF1A-like isoform X1 OS=Durio zibethinus OX=66656 GN=LOC111280130 PE=4 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 2.2e-38
Identity = 97/188 (51.60%), Postives = 123/188 (65.43%), Query Frame = 0


Query: 1   MADFNASTSSA-------EKPTLSTTT------VMFSGDVDDPSEDACSICLEPFTSQDP 60
           MADF  S+S+A       EKP + T T        F G + D SED CSICLEPFT QDP
Sbjct: 1   MADFTTSSSAAAASCSLFEKPLVLTATSSSSPPSSFGGALSDGSEDGCSICLEPFTVQDP 60

Query: 61  ATITSCKHDYHLHCILEWAKRSNECPICSQLLFMKDPSSQELLVSMKNERCSRSRYTITT 120
            T+TSC+H+YHL CILEW++RS ECPIC QL  +KDP+SQELL +++NER  RSR     
Sbjct: 61  VTVTSCRHEYHLQCILEWSQRSKECPICWQLFVLKDPASQELLDAVRNERYCRSRNISAV 120

Query: 121 STILNLNEEHLG--QNASYSDDPDFRGRIMRHLATAASRARYLHRADRQRPSGQA----- 169
            T L+   +  G  ++A +SDD DF  RI++HLA AAS+ARY+ R +RQR SG       
Sbjct: 121 PTDLHHFHDVFGIPEDAFHSDDLDFDERILQHLAAAASQARYVRRRERQRSSGLGPSQVL 180

[Close]

BLAST of Lcy02g014990 vs. NCBI nr
Match: XP_022138018.1 (E3 ubiquitin-protein ligase RHF1A-like [Momordica charantia] >XP_022138019.1 E3 ubiquitin-protein ligase RHF1A-like [Momordica charantia])

HSP 1 Score: 258.1 bits (658), Expect = 7.6e-65
Identity = 148/234 (63.25%), Postives = 168/234 (71.79%), Query Frame = 0


Query: 1   MADFNASTSSAEKPTLSTTTVMFSGDVDDPSED--ACSICLEPFTSQDPATITSCKHDYH 60
           MADFNA T +    ++ST  V+FSG VDDPSED  +CSICLEPF SQDPA+ITSCKHDYH
Sbjct: 1   MADFNADTPTF---SISTRMVVFSGVVDDPSEDDFSCSICLEPFNSQDPASITSCKHDYH 60

Query: 61  LHCILEWAKRSNECPICSQLLFMKDPSSQELLVSMKNERCSRSRYTITTSTILNLNEEHL 120
           L C+LEWAKRSNECPICS+ L MKDP SQELLVSM+NE  SRS     TSTI   +EE L
Sbjct: 61  LQCVLEWAKRSNECPICSRSLVMKDPISQELLVSMRNESFSRSINPSATSTI---HEEDL 120

Query: 121 GQNASYSDDPDFRGRIMRHLATAASRARYLHRADRQRPSGQAFMSSPEEMLVFDSSDGSS 180
            Q                HLA  A+RA YLH  +R+R SGQ F+SSPEE+LVFDSSD  S
Sbjct: 121 EQ----------------HLAGGANRAHYLHETERRRLSGQEFVSSPEEILVFDSSDRRS 180

Query: 181 RPSRSLSEDHYRSPYSVAPTSTDTSSNPCTGSEPTMKPRVRHWQAPSNITRRPN 233
             S SLSEDHYRSP SVA T+  T+ +P  GSEP MKPRVRHWQAPS+ T+R N
Sbjct: 181 HTSSSLSEDHYRSPSSVASTNAITTFSPYAGSEPVMKPRVRHWQAPSDNTQRTN 212

[Close]

BLAST of Lcy02g014990 vs. NCBI nr
Match: XP_030922741.1 (E3 ubiquitin-protein ligase RHF1A isoform X1 [Quercus lobata])

HSP 1 Score: 181.8 bits (460), Expect = 6.9e-42
Identity = 115/249 (46.18%), Postives = 156/249 (62.65%), Query Frame = 0


Query: 1   MADFNASTSSAEKPTLSTTTVMFSGDVDDPSEDACSICLEPFTSQDPATITSCKHDYHLH 60
           M++ + S+SS+  P +ST +   SG  DD  EDACSICLEPF + DPATITSCKH+YHLH
Sbjct: 1   MSNLSFSSSSSGNPLVSTAS--SSGLNDDVFEDACSICLEPFNTADPATITSCKHEYHLH 60

Query: 61  CILEWAKRSNECPICSQLLFMKDPSSQELLVSMKNERCSRSR--YTITTSTILNLNEE-H 120
           CILEW++RS ECPIC QLL +KDP+SQ LL ++  ERCSRSR   ++  + + +  E+ +
Sbjct: 61  CILEWSQRSKECPICCQLLVLKDPASQALLAAVDIERCSRSRSISSVAPTPLHHFCEDFN 120

Query: 121 LGQNASYSDDPDFRGRIMRHLATAASRARYLHRADRQRPSGQAFMSSPEEMLVFDSSDGS 180
           +  ++SYSDD DF  RIM+HLA AASRARYL R +RQR SG      P E+L+F SS  S
Sbjct: 121 VEHDSSYSDDSDFDDRIMQHLAAAASRARYLRRRERQRASG----LGPSELLIFTSSSSS 180

Query: 181 SRPSRSLSED----HYRSP-------YSVAPTST---DTSSNPCTGSEPTMKPRVRHWQA 233
            + + +  ED     Y SP        +V P S+   +  S      +   +P V + Q 
Sbjct: 181 QQTNVTSPEDFQNLSYGSPEGSPTSGVNVQPQSSVVVNLGSTTAVNRDIPSRPSVVYSQP 240

[Close]

BLAST of Lcy02g014990 vs. NCBI nr
Match: KAF3955788.1 (hypothetical protein CMV_019032 [Castanea mollissima])

HSP 1 Score: 180.6 bits (457), Expect = 1.5e-41
Identity = 116/249 (46.59%), Postives = 152/249 (61.04%), Query Frame = 0


Query: 1   MADFNASTSSAEKPTLSTTTVMFSGDVDDPSEDACSICLEPFTSQDPATITSCKHDYHLH 60
           M++ + S+SS E P +ST +   SG  DD  EDACSICLEPF + DPATITSCKH+YHLH
Sbjct: 1   MSNLSFSSSSLENPLVSTAS--SSGLNDDVFEDACSICLEPFNTADPATITSCKHEYHLH 60

Query: 61  CILEWAKRSNECPICSQLLFMKDPSSQELLVSMKNERCSRS-RYTITTSTILN--LNEEH 120
           CILEW++RS ECPIC QLL +KDP+SQ LL ++  ERCSRS   +    T L+    + +
Sbjct: 61  CILEWSQRSKECPICCQLLVLKDPASQALLAAVDIERCSRSTNISSAAPTPLHHFCEDLY 120

Query: 121 LGQNASYSDDPDFRGRIMRHLATAASRARYLHRADRQRPSGQAFMSSPEEMLVFDSSDGS 180
           +  ++SYSDD DF  RIM+HLA AASRARYL R +RQR SG      P E+L+F SS  S
Sbjct: 121 VEHDSSYSDDSDFDDRIMQHLAAAASRARYLRRRERQRASG----LGPSELLIFTSSSSS 180

Query: 181 SRPSRSLSED----HYRSP-------YSVAPTST---DTSSNPCTGSEPTMKPRVRHWQA 233
            +   +  ED     Y SP        +V P S+   +  S      +   +P V + Q 
Sbjct: 181 QQTHVTSPEDFQNLSYGSPEGSPTSGVNVQPQSSVDVNLGSTTAVNRDIPFRPSVVYSQP 240

[Close]

BLAST of Lcy02g014990 vs. NCBI nr
Match: XP_023895717.1 (E3 ubiquitin-protein ligase RHF1A [Quercus suber])

HSP 1 Score: 180.6 bits (457), Expect = 1.5e-41
Identity = 117/252 (46.43%), Postives = 152/252 (60.32%), Query Frame = 0


Query: 1   MADFNASTSSAEKPTLSTTTVMFSGDVDDPSEDACSICLEPFTSQDPATITSCKHDYHLH 60
           M++   S+SS+E P +ST +   SG  DD  EDACSICLEPF + DPATIT CKH+YHLH
Sbjct: 1   MSNLIFSSSSSENPLVSTAS--SSGLNDDVFEDACSICLEPFNTADPATITKCKHEYHLH 60

Query: 61  CILEWAKRSNECPICSQLLFMKDPSSQELLVSMKNERCSRSRYTITTST------ILNLN 120
           CILEW++RS ECPIC QLL +KDP+SQ LL ++  ERCSRSR   + +         + N
Sbjct: 61  CILEWSQRSKECPICCQLLVLKDPASQALLAAVDIERCSRSRNISSAAPTPLHHFCEDFN 120

Query: 121 EEHLGQNASYSDDPDFRGRIMRHLATAASRARYLHRADRQRPSGQAFMSSPEEMLVFDSS 180
            EH   ++SYSDD DF  RIM+HLA AASRARYL R +RQR SG      P E+L+F SS
Sbjct: 121 VEH---DSSYSDDSDFDDRIMQHLAAAASRARYLRRRERQRASG----LGPSELLIFTSS 180

Query: 181 DGSSRPSRSLSED----HYRSP-------YSVAPTST---DTSSNPCTGSEPTMKPRVRH 233
             S + + +  ED     Y SP        +V P S+   +  S      +   +P V +
Sbjct: 181 SSSQQTNVTSPEDFQNLSYGSPEGSPTSGVNVQPQSSVDVNLGSTTAVNRDILSRPSVVY 240

[Close]

BLAST of Lcy02g014990 vs. NCBI nr
Match: KAF3955787.1 (hypothetical protein CMV_019032 [Castanea mollissima])

HSP 1 Score: 180.3 bits (456), Expect = 2.0e-41
Identity = 107/206 (51.94%), Postives = 136/206 (66.02%), Query Frame = 0


Query: 1   MADFNASTSSAEKPTLSTTTVMFSGDVDDPSEDACSICLEPFTSQDPATITSCKHDYHLH 60
           M++ + S+SS E P +ST +   SG  DD  EDACSICLEPF + DPATITSCKH+YHLH
Sbjct: 1   MSNLSFSSSSLENPLVSTAS--SSGLNDDVFEDACSICLEPFNTADPATITSCKHEYHLH 60

Query: 61  CILEWAKRSNECPICSQLLFMKDPSSQELLVSMKNERCSRS-RYTITTSTILN--LNEEH 120
           CILEW++RS ECPIC QLL +KDP+SQ LL ++  ERCSRS   +    T L+    + +
Sbjct: 61  CILEWSQRSKECPICCQLLVLKDPASQALLAAVDIERCSRSTNISSAAPTPLHHFCEDLY 120

Query: 121 LGQNASYSDDPDFRGRIMRHLATAASRARYLHRADRQRPSGQAFMSSPEEMLVFDSSDGS 180
           +  ++SYSDD DF  RIM+HLA AASRARYL R +RQR SG      P E+L+F SS  S
Sbjct: 121 VEHDSSYSDDSDFDDRIMQHLAAAASRARYLRRRERQRASG----LGPSELLIFTSSSSS 180

Query: 181 SRPSRSLSEDHYRSPYSVAPTSTDTS 204
            +   +  ED     Y  +P  + TS
Sbjct: 181 QQTHVTSPEDFQNLSYG-SPEGSPTS 199

[Close]

BLAST of Lcy02g014990 vs. TAIR 10
Match: AT4G14220.1 (RING-H2 group F1A )

HSP 1 Score: 131.7 bits (330), Expect = 7.6e-31
Identity = 72/169 (42.60%), Postives = 105/169 (62.13%), Query Frame = 0


Query: 4   FNASTSSAEKPTL-----STTTVMFSGDVDDPSEDACSICLEPFTSQDPATITSCKHDYH 63
           FN S +S   P +     S++ ++ + D D+ ++DACSICLEPFT QDP+T+TSCKH+YH
Sbjct: 10  FNLSDNSPFNPAIGSSSSSSSALVVASDDDNNTDDACSICLEPFTLQDPSTVTSCKHEYH 69

Query: 64  LHCILEWAKRSNECPICSQLLFMKDPSSQELLVSMKNERCSRSRYTITTSTILNLNEEH- 123
           L CI+EW++RS ECPIC QL  ++DP+SQELL +++ ER  ++R  I++S+ ++++  H 
Sbjct: 70  LQCIIEWSQRSKECPICWQLFVLRDPASQELLAAVEKERLLKTR-NISSSSPISIHHSHD 129

Query: 124 -LGQNASYSDDPDFRGRIMRHLATAASRARYLHRADRQRPSGQAFMSSP 166
                   S    F  + +RHL  AA R   L R D Q  S     S P
Sbjct: 130 DFHSEEEESQFSSFDEQFLRHLTEAAHRRCLLRRRDGQISSSLVSSSDP 177

[Close]

BLAST of Lcy02g014990 vs. TAIR 10
Match: AT5G22000.2 (RING-H2 group F2A )

HSP 1 Score: 120.2 bits (300), Expect = 2.3e-27
Identity = 80/252 (31.75%), Postives = 128/252 (50.79%), Query Frame = 0


Query: 3   DFNASTSSAEKPTLSTTTVMFSGDVDDPSEDACSICLEPFTSQDPATITSCKHDYHLHCI 62
           +   ST+++E   L++      G + D  +DACSICLE F   DP+T+TSCKH+YHL CI
Sbjct: 2   EVRVSTTTSE-GHLTSAAAFVEGGIQDACDDACSICLESFCESDPSTLTSCKHEYHLQCI 61

Query: 63  LEWAKRSNECPICSQLLFMKDPSSQELLVSMKNERCSRSRYTITTS-----TILNLNEEH 122
           LEW +RS++CP+C Q + +KDP+SQELL +++ ER  R   T   +     T+ +   +H
Sbjct: 62  LEWCQRSSQCPMCWQSISLKDPTSQELLEAVEQERNFRFNPTRNATIFRHPTLGDFELQH 121

Query: 123 LGQNASYSDDPDFRGRIMRHLATAASRARYLHRADRQRPSGQAFMSSPEEMLVFDSSDGS 182
           L       D+ +   RI++HLA AA+  R  H   R+    ++     ++ +VF S   +
Sbjct: 122 LPVGV---DNAEIEERIIQHLAAAAAMGRARHGVRREGHRSRSSSQGHQQFMVFSSQPNA 181

Query: 183 SR-----------------------PSRSLSEDHYRS---------PYSVAPTSTDTSSN 218
           S                        P  +L E  ++S         P  V+P+++D++S 
Sbjct: 182 SSPPPHPPMPSSPSQRDESDTVSNLPHNALGEGSHQSNTQPPTSSHPRQVSPSASDSNSR 241

[Close]

BLAST of Lcy02g014990 vs. TAIR 10
Match: AT5G22000.1 (RING-H2 group F2A )

HSP 1 Score: 120.2 bits (300), Expect = 2.3e-27
Identity = 78/249 (31.33%), Postives = 125/249 (50.20%), Query Frame = 0


Query: 6   ASTSSAEKPTLSTTTVMFSGDVDDPSEDACSICLEPFTSQDPATITSCKHDYHLHCILEW 65
           A  ++  +  L++      G + D  +DACSICLE F   DP+T+TSCKH+YHL CILEW
Sbjct: 4   AGETTTSEGHLTSAAAFVEGGIQDACDDACSICLESFCESDPSTLTSCKHEYHLQCILEW 63

Query: 66  AKRSNECPICSQLLFMKDPSSQELLVSMKNERCSRSRYTITTS-----TILNLNEEHLGQ 125
            +RS++CP+C Q + +KDP+SQELL +++ ER  R   T   +     T+ +   +HL  
Sbjct: 64  CQRSSQCPMCWQSISLKDPTSQELLEAVEQERNFRFNPTRNATIFRHPTLGDFELQHLPV 123

Query: 126 NASYSDDPDFRGRIMRHLATAASRARYLHRADRQRPSGQAFMSSPEEMLVFDSSDGSSR- 185
                D+ +   RI++HLA AA+  R  H   R+    ++     ++ +VF S   +S  
Sbjct: 124 GV---DNAEIEERIIQHLAAAAAMGRARHGVRREGHRSRSSSQGHQQFMVFSSQPNASSP 183

Query: 186 ----------------------PSRSLSEDHYRS---------PYSVAPTSTDTSSNPCT 218
                                 P  +L E  ++S         P  V+P+++D++S P  
Sbjct: 184 PPHPPMPSSPSQRDESDTVSNLPHNALGEGSHQSNTQPPTSSHPRQVSPSASDSNSRPLN 243

[Close]

BLAST of Lcy02g014990 vs. TAIR 10
Match: AT5G22000.3 (RING-H2 group F2A )

HSP 1 Score: 120.2 bits (300), Expect = 2.3e-27
Identity = 78/249 (31.33%), Postives = 125/249 (50.20%), Query Frame = 0


Query: 6   ASTSSAEKPTLSTTTVMFSGDVDDPSEDACSICLEPFTSQDPATITSCKHDYHLHCILEW 65
           A  ++  +  L++      G + D  +DACSICLE F   DP+T+TSCKH+YHL CILEW
Sbjct: 4   AGETTTSEGHLTSAAAFVEGGIQDACDDACSICLESFCESDPSTLTSCKHEYHLQCILEW 63

Query: 66  AKRSNECPICSQLLFMKDPSSQELLVSMKNERCSRSRYTITTS-----TILNLNEEHLGQ 125
            +RS++CP+C Q + +KDP+SQELL +++ ER  R   T   +     T+ +   +HL  
Sbjct: 64  CQRSSQCPMCWQSISLKDPTSQELLEAVEQERNFRFNPTRNATIFRHPTLGDFELQHLPV 123

Query: 126 NASYSDDPDFRGRIMRHLATAASRARYLHRADRQRPSGQAFMSSPEEMLVFDSSDGSSR- 185
                D+ +   RI++HLA AA+  R  H   R+    ++     ++ +VF S   +S  
Sbjct: 124 GV---DNAEIEERIIQHLAAAAAMGRARHGVRREGHRSRSSSQGHQQFMVFSSQPNASSP 183

Query: 186 ----------------------PSRSLSEDHYRS---------PYSVAPTSTDTSSNPCT 218
                                 P  +L E  ++S         P  V+P+++D++S P  
Sbjct: 184 PPHPPMPSSPSQRDESDTVSNLPHNALGEGSHQSNTQPPTSSHPRQVSPSASDSNSRPLN 243

[Close]

BLAST of Lcy02g014990 vs. TAIR 10
Match: AT3G02290.1 (RING/U-box superfamily protein )

HSP 1 Score: 67.0 bits (162), Expect = 2.3e-11
Identity = 23/48 (47.92%), Postives = 33/48 (68.75%), Query Frame = 0


Query: 32  EDACSICLEPFTSQDPATITSCKHDYHLHCILEWAKRSNECPICSQLL 80
           ED C  CLE +TS++P  +T C H +HL CI EW +RS  CP+C +++
Sbjct: 178 EDVCPTCLEEYTSENPKIVTKCSHHFHLSCIYEWMERSENCPVCGKVM 225

The following BLAST results are available for this feature:

BLAST of Lcy02g014990 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q4TU14	1.1e-29	42.60	E3 ubiquitin-protein ligase RHF1A OS=Arabidopsis thaliana OX=3702 GN=RHF1A PE=1 ...	[more]
Q9ZT42	3.2e-26	31.33	E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis thaliana OX=3702 GN=RHF2A PE=2 ...	[more]
Q8LE94	3.2e-10	47.92	E3 ubiquitin-protein ligase At3g02290 OS=Arabidopsis thaliana OX=3702 GN=At3g022...	[more]
Q2HIJ8	7.2e-10	43.64	Probable E3 ubiquitin-protein ligase RHB1A OS=Arabidopsis thaliana OX=3702 GN=RH...	[more]
Q93ZF6	1.4e-08	45.10	E3 ubiquitin-protein ligase AIRP1 OS=Arabidopsis thaliana OX=3702 GN=AIRP1 PE=1 ...	[more]

BLAST of Lcy02g014990 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C8W9	3.7e-65	63.25	E3 ubiquitin-protein ligase RHF1A-like OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A7N2LWI5	3.3e-42	46.18	RING-type domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1	[more]
A0A2I4GSJ3	2.4e-40	43.14	E3 ubiquitin-protein ligase RHF1A OS=Juglans regia OX=51240 GN=LOC109010471 PE=4...	[more]
A0A371IBL0	1.6e-39	45.56	E3 ubiquitin-protein ligase RHF1A (Fragment) OS=Mucuna pruriens OX=157652 GN=RHF...	[more]
A0A6P5X3S1	2.2e-38	51.60	E3 ubiquitin-protein ligase RHF1A-like isoform X1 OS=Durio zibethinus OX=66656 G...	[more]

BLAST of Lcy02g014990 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022138018.1	7.6e-65	63.25	E3 ubiquitin-protein ligase RHF1A-like [Momordica charantia] >XP_022138019.1 E3 ...	[more]
XP_030922741.1	6.9e-42	46.18	E3 ubiquitin-protein ligase RHF1A isoform X1 [Quercus lobata]	[more]
KAF3955788.1	1.5e-41	46.59	hypothetical protein CMV_019032 [Castanea mollissima]	[more]
XP_023895717.1	1.5e-41	46.43	E3 ubiquitin-protein ligase RHF1A [Quercus suber]	[more]
KAF3955787.1	2.0e-41	51.94	hypothetical protein CMV_019032 [Castanea mollissima]	[more]

BLAST of Lcy02g014990 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G14220.1	7.6e-31	42.60	RING-H2 group F1A	[more]
AT5G22000.2	2.3e-27	31.75	RING-H2 group F2A	[more]
AT5G22000.1	2.3e-27	31.33	RING-H2 group F2A	[more]
AT5G22000.3	2.3e-27	31.33	RING-H2 group F2A	[more]
AT3G02290.1	2.3e-11	47.92	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 35..75 e-value: 1.4E-7 score: 41.2
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 34..75 e-value: 1.8E-11 score: 44.2
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 35..76 score: 12.356501
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 11..79 e-value: 9.6E-17 score: 62.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 170..237
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 192..211
None	No IPR available	PANTHER	PTHR46463:SF49	E3 UBIQUITIN-PROTEIN LIGASE RHF1A-LIKE	coord: 1..201
None	No IPR available	PANTHER	PTHR46463	ZINC FINGER, RING/FYVE/PHD-TYPE	coord: 1..201
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 26..82

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy02g014990.1	Lcy02g014990.1	mRNA