Lcy02g013310 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy02g013310
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	late embryogenesis abundant protein At1g64065
Location	Chr02: 38981418 .. 38982123 (-)
RNA-Seq Expression	Lcy02g013310
Synteny	Lcy02g013310

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTATAAAACCATTCCTTTTACACCACCAATAAACCCCCCTCCTCCTCCTCCAGCCGGAATCAATGGCGGCCGAAGAAACTTCCGGCGACCGGCCGGCGACACTCCCATCAAGGCGCAGAGCATCAGAAAAATGCATCAACACCTTCTGCATTTACCTCTTCGCCGCCGCCGCCACCGCCTGCATCGCCGCCCTGACCCTCGGCCTCGTCGTCGTCCGGGTAAAAACCCCGACGGTAAAATTAACCTCCGTCGCGGTAAGAAATCTCCACTACGGCTTCTCGCCGACCCCGTTCATGGACGCCACATTAATCGCCGAAATAGCGATCGGAAATCCCAATTTCGGGAAGTTCAGGTACGAGGAGAAAACGAACGTGACATTGATTTACTACGGCGTGGCGGTGGGAATCGGCGAGGTAAAAGGGGTCTCTGTAAATGCAAAGGGTGTTGAAGAAACGAAGCTTACAGTGAAGGTGAAACCAAATTCGAGCTTCGTTGACGTGGATTACTTCAGCGACGATTTGGCGAGGTTGAAGACGATGAATATGAGCTGCATCGCTGAGTTTGAGGGAAGGGTTCGTTTGTTGAAATTGTTTAAGGAGAAGAAAGTTTCTGTGTTGAAATGTACTATGACCTTGAATTTGACCTCCCATGGCGTCCAAAATATTGCTTGCCTTTAGAGGAATATCGAGGAATATATGGGAGTGA

mRNA sequence

TCTATAAAACCATTCCTTTTACACCACCAATAAACCCCCCTCCTCCTCCTCCAGCCGGAATCAATGGCGGCCGAAGAAACTTCCGGCGACCGGCCGGCGACACTCCCATCAAGGCGCAGAGCATCAGAAAAATGCATCAACACCTTCTGCATTTACCTCTTCGCCGCCGCCGCCACCGCCTGCATCGCCGCCCTGACCCTCGGCCTCGTCGTCGTCCGGGTAAAAACCCCGACGGTAAAATTAACCTCCGTCGCGGTAAGAAATCTCCACTACGGCTTCTCGCCGACCCCGTTCATGGACGCCACATTAATCGCCGAAATAGCGATCGGAAATCCCAATTTCGGGAAGTTCAGGTACGAGGAGAAAACGAACGTGACATTGATTTACTACGGCGTGGCGGTGGGAATCGGCGAGGTAAAAGGGGTCTCTGTAAATGCAAAGGGTGTTGAAGAAACGAAGCTTACAGTGAAGGTGAAACCAAATTCGAGCTTCGTTGACGTGGATTACTTCAGCGACGATTTGGCGAGGTTGAAGACGATGAATATGAGCTGCATCGCTGAGTTTGAGGGAAGGGTTCGTTTGTTGAAATTGTTTAAGGAGAAGAAAGTTTCTGTGTTGAAATGTACTATGACCTTGAATTTGACCTCCCATGGCGTCCAAAATATTGCTTGCCTTTAGAGGAATATCGAGGAATATATGGGAGTGA

Coding sequence (CDS)

ATGGCGGCCGAAGAAACTTCCGGCGACCGGCCGGCGACACTCCCATCAAGGCGCAGAGCATCAGAAAAATGCATCAACACCTTCTGCATTTACCTCTTCGCCGCCGCCGCCACCGCCTGCATCGCCGCCCTGACCCTCGGCCTCGTCGTCGTCCGGGTAAAAACCCCGACGGTAAAATTAACCTCCGTCGCGGTAAGAAATCTCCACTACGGCTTCTCGCCGACCCCGTTCATGGACGCCACATTAATCGCCGAAATAGCGATCGGAAATCCCAATTTCGGGAAGTTCAGGTACGAGGAGAAAACGAACGTGACATTGATTTACTACGGCGTGGCGGTGGGAATCGGCGAGGTAAAAGGGGTCTCTGTAAATGCAAAGGGTGTTGAAGAAACGAAGCTTACAGTGAAGGTGAAACCAAATTCGAGCTTCGTTGACGTGGATTACTTCAGCGACGATTTGGCGAGGTTGAAGACGATGAATATGAGCTGCATCGCTGAGTTTGAGGGAAGGGTTCGTTTGTTGAAATTGTTTAAGGAGAAGAAAGTTTCTGTGTTGAAATGTACTATGACCTTGAATTTGACCTCCCATGGCGTCCAAAATATTGCTTGCCTTTAG

Protein sequence

MAAEETSGDRPATLPSRRRASEKCINTFCIYLFAAAATACIAALTLGLVVVRVKTPTVKLTSVAVRNLHYGFSPTPFMDATLIAEIAIGNPNFGKFRYEEKTNVTLIYYGVAVGIGEVKGVSVNAKGVEETKLTVKVKPNSSFVDVDYFSDDLARLKTMNMSCIAEFEGRVRLLKLFKEKKVSVLKCTMTLNLTSHGVQNIACL

Homology

[Close]

BLAST of Lcy02g013310 vs. ExPASy Swiss-Prot
Match: Q6DST1 (Late embryogenesis abundant protein At1g64065 OS=Arabidopsis thaliana OX=3702 GN=At1g64065 PE=2 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.4e-14
Identity = 68/203 (33.50%), Postives = 106/203 (52.22%), Query Frame = 0


Query: 4   EETSGDRPATLPSRRRASEKCINTFCIYLFAAAATACIAALTLGLVVVRVKTPTVKLTSV 63
           EE SG R       RR +E+      +Y            L L  + +R+  P ++  S+
Sbjct: 20  EEQSGPR-----IWRRKTEEPPGKCLVYSLTIIVIIFALCLILSSIFLRISKPEIETRSI 79

Query: 64  AVRNLHYGFSPT-PFMDATLIAEIAIGNPNFGKFRYEEKT-NVTLIYYGVAVGIGEVKGV 123
           + R+L  G + T P+ +ATL+++I+I N NFG F +E+ T  V    +GV VG  +++G 
Sbjct: 80  STRDLRSGGNSTNPYFNATLVSDISIRNSNFGAFEFEDSTLRVVYADHGV-VGETKIEGR 139

Query: 124 SVNA-KGVEETKLTVKVKPNSSFVDVDYFSDDLARLKTMNMSCIAEFEGRVRLLKLFKEK 183
            V A K V  T + V++  +   +D      DL RL  + +  +AE  GR+++L   K  
Sbjct: 140 RVEAHKTVRITGVVVEI-GSFRLLDTKDLDKDL-RLGFLELRSVAEVRGRIKVLGR-KRW 199

Query: 184 KVSVLKCTMTLNLTSHGVQNIAC 204
           KVSV+ CTM LNLT   +QN+ C
Sbjct: 200 KVSVMSCTMRLNLTGRFIQNLLC 213

[Close]

BLAST of Lcy02g013310 vs. ExPASy TrEMBL
Match: A0A6J1I1W2 (late embryogenesis abundant protein At1g64065 OS=Cucurbita maxima OX=3661 GN=LOC111469093 PE=4 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 2.5e-86
Identity = 170/203 (83.74%), Postives = 181/203 (89.16%), Query Frame = 0


Query: 1   MAAEETSGDRPATLPSRRRASEKCINTFCIYLFAAAATACIAALTLGLVVVRVKTPTVKL 60
           MAA E   DRPATL SRR+ASEKCINTFCIYLFA AA ACIAAL LGLVVVRVKTPTVKL
Sbjct: 1   MAAGEPPNDRPATLRSRRKASEKCINTFCIYLFAIAAVACIAALILGLVVVRVKTPTVKL 60

Query: 61  TSVAVRNLHYGFSPTPFMDATLIAEIAIGNPNFGKFRYEEKTNVTLIYYGVAVGIGEVKG 120
           TSV V+NLHYGFSPTPFMDATLIAEI + NPNFG+F+YEE TN TLIYYGVAVGIGEVK 
Sbjct: 61  TSVTVKNLHYGFSPTPFMDATLIAEITMENPNFGEFKYEEVTNTTLIYYGVAVGIGEVKT 120

Query: 121 VSVNAKGVEETKLTVKVKPNSSFVDVDYFSDDLARLKTMNMSCIAEFEGRVRLLKLFKEK 180
           VSVNAK  +    TVKVKPNSSFVDVDYFS DLA LKTMNMSCIAEF+GRVRLLKLFKEK
Sbjct: 121 VSVNAKSNKNANFTVKVKPNSSFVDVDYFSHDLAMLKTMNMSCIAEFKGRVRLLKLFKEK 180

Query: 181 KVSVLKCTMTLNLTSHGVQNIAC 204
           KVS+LKCTM+LNL+SHGVQN+AC
Sbjct: 181 KVSMLKCTMSLNLSSHGVQNLAC 203

[Close]

BLAST of Lcy02g013310 vs. ExPASy TrEMBL
Match: A0A6J1EM85 (late embryogenesis abundant protein At1g64065 OS=Cucurbita moschata OX=3662 GN=LOC111435804 PE=4 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 1.2e-85
Identity = 169/203 (83.25%), Postives = 180/203 (88.67%), Query Frame = 0


Query: 1   MAAEETSGDRPATLPSRRRASEKCINTFCIYLFAAAATACIAALTLGLVVVRVKTPTVKL 60
           MAA E   DRPATL SRR+ASEKCINTFCIYLFA AA ACIAAL LGLVVVRVKTPTVKL
Sbjct: 1   MAAGEPPNDRPATLRSRRKASEKCINTFCIYLFAIAAVACIAALILGLVVVRVKTPTVKL 60

Query: 61  TSVAVRNLHYGFSPTPFMDATLIAEIAIGNPNFGKFRYEEKTNVTLIYYGVAVGIGEVKG 120
           TSV V+NLHYGFSPTPFMDATLIAEI + NPNFG+F+YEE TN TLIYYGVAVGIGEVK 
Sbjct: 61  TSVTVKNLHYGFSPTPFMDATLIAEITMENPNFGEFKYEEVTNTTLIYYGVAVGIGEVKT 120

Query: 121 VSVNAKGVEETKLTVKVKPNSSFVDVDYFSDDLARLKTMNMSCIAEFEGRVRLLKLFKEK 180
           VSVNAK  ++    VKVKPNSSFVDVDYFS DLA LKTMNMSCIAEF+GRVRLLKLFKEK
Sbjct: 121 VSVNAKSNKKANFKVKVKPNSSFVDVDYFSHDLAMLKTMNMSCIAEFKGRVRLLKLFKEK 180

Query: 181 KVSVLKCTMTLNLTSHGVQNIAC 204
           KVS+LKCTM+LNL SHGVQN+AC
Sbjct: 181 KVSMLKCTMSLNLNSHGVQNLAC 203

[Close]

BLAST of Lcy02g013310 vs. ExPASy TrEMBL
Match: A0A6J1CXS7 (late embryogenesis abundant protein At1g64065 OS=Momordica charantia OX=3673 GN=LOC111015254 PE=4 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 1.2e-77
Identity = 152/203 (74.88%), Postives = 171/203 (84.24%), Query Frame = 0


Query: 1   MAAEETSGDRPATLPSRRRASEKCINTFCIYLFAAAATACIAALTLGLVVVRVKTPTVKL 60
           MAA+ETSGDRPATL SRRRASE+CIN  CIYLFA AA AC+A L LGL VVRVKTPT KL
Sbjct: 1   MAAQETSGDRPATLRSRRRASERCINACCIYLFAGAAAACVAVLILGLTVVRVKTPTAKL 60

Query: 61  TSVAVRNLHYGFSPTPFMDATLIAEIAIGNPNFGKFRYEEKTNVTLIYYGVAVGIGEVKG 120
           +SVAV+NL YGFSP PF+DATLIAE+ I NPNFG+F+YEE T+ + IYYGVA GIGEVK 
Sbjct: 61  SSVAVKNLSYGFSPNPFVDATLIAEVTIENPNFGEFKYEENTDASFIYYGVAAGIGEVKR 120

Query: 121 VSVNAKGVEETKLTVKVKPNSSFVDVDYFSDDLARLKTMNMSCIAEFEGRVRLLKLFKEK 180
           VSVNAKGV+ T  +V+VK N+S  DVDY S DLA LK MNMSCIAEFEGRVRLLKLFKE 
Sbjct: 121 VSVNAKGVKRTSFSVEVKTNASVADVDYMSYDLASLKRMNMSCIAEFEGRVRLLKLFKEM 180

Query: 181 KVSVLKCTMTLNLTSHGVQNIAC 204
           KVS+LKCTMTLN +SH + N+AC
Sbjct: 181 KVSLLKCTMTLNFSSHAIHNLAC 203

[Close]

BLAST of Lcy02g013310 vs. ExPASy TrEMBL
Match: A0A5A7TMT1 (Late embryogenesis abundant protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G002130 PE=4 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 3.6e-77
Identity = 152/204 (74.51%), Postives = 174/204 (85.29%), Query Frame = 0


Query: 1   MAAEETSGDRPATLPSRRRASEKCINTFCIYLFAAAATACIAALTLGLVVVRVKTPTVKL 60
           MAA++  GDRP    SRR++S+KC+N FCI LFAAAATACIAALT GLVV+RVKTPTVKL
Sbjct: 1   MAADKIPGDRPTAHRSRRKSSKKCLNAFCICLFAAAATACIAALTFGLVVLRVKTPTVKL 60

Query: 61  TSVAVRNLHYGFSPTPFMDATLIAEIAIGNPNFGKFRYEEKTNVTLIYYGVAVGIGEVKG 120
           TSVAV+NLHYGFSPTPFM+ATL  EI + NPN+G F YE   NVTLIYYGV VGIGEVK 
Sbjct: 61  TSVAVKNLHYGFSPTPFMEATLTGEITMENPNYGAFEYEGVRNVTLIYYGVVVGIGEVKR 120

Query: 121 VSVNAKGVEETKLTVKVKPNSSFVDVDYFSDDLARLKTMNMSCIAEFEGRVRLLKLFKEK 180
           +SVNAK +E+ K  VKVKPN  FV+VDYFSDDLARLKTMNMS  AEFEG++ LLKLFKEK
Sbjct: 121 LSVNAKSIEKRKFIVKVKPNWRFVNVDYFSDDLARLKTMNMSWNAEFEGKIYLLKLFKEK 180

Query: 181 KVSVLKCTMTLNLTSHGVQNIACL 205
           K+SV+KC+ +LNLTSHGVQN+ACL
Sbjct: 181 KISVMKCSTSLNLTSHGVQNLACL 204

[Close]

BLAST of Lcy02g013310 vs. ExPASy TrEMBL
Match: A0A1S3AUE7 (late embryogenesis abundant protein At1g64065 OS=Cucumis melo OX=3656 GN=LOC103482795 PE=4 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 3.6e-77
Identity = 152/204 (74.51%), Postives = 174/204 (85.29%), Query Frame = 0


Query: 1   MAAEETSGDRPATLPSRRRASEKCINTFCIYLFAAAATACIAALTLGLVVVRVKTPTVKL 60
           MAA++  GDRP    SRR++S+KC+N FCI LFAAAATACIAALT GLVV+RVKTPTVKL
Sbjct: 1   MAADKIPGDRPTAHRSRRKSSKKCLNAFCICLFAAAATACIAALTFGLVVLRVKTPTVKL 60

Query: 61  TSVAVRNLHYGFSPTPFMDATLIAEIAIGNPNFGKFRYEEKTNVTLIYYGVAVGIGEVKG 120
           TSVAV+NLHYGFSPTPFM+ATL  EI + NPN+G F YE   NVTLIYYGV VGIGEVK 
Sbjct: 61  TSVAVKNLHYGFSPTPFMEATLTGEITMENPNYGAFEYEGVRNVTLIYYGVVVGIGEVKR 120

Query: 121 VSVNAKGVEETKLTVKVKPNSSFVDVDYFSDDLARLKTMNMSCIAEFEGRVRLLKLFKEK 180
           +SVNAK +E+ K  VKVKPN  FV+VDYFSDDLARLKTMNMS  AEFEG++ LLKLFKEK
Sbjct: 121 LSVNAKSIEKRKFIVKVKPNWRFVNVDYFSDDLARLKTMNMSWNAEFEGKIYLLKLFKEK 180

Query: 181 KVSVLKCTMTLNLTSHGVQNIACL 205
           K+SV+KC+ +LNLTSHGVQN+ACL
Sbjct: 181 KISVMKCSTSLNLTSHGVQNLACL 204

[Close]

BLAST of Lcy02g013310 vs. NCBI nr
Match: XP_022970100.1 (late embryogenesis abundant protein At1g64065 [Cucurbita maxima] >KAG6579536.1 Late embryogenesis abundant protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016995.1 Late embryogenesis abundant protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 328.2 bits (840), Expect = 5.1e-86
Identity = 170/203 (83.74%), Postives = 181/203 (89.16%), Query Frame = 0


Query: 1   MAAEETSGDRPATLPSRRRASEKCINTFCIYLFAAAATACIAALTLGLVVVRVKTPTVKL 60
           MAA E   DRPATL SRR+ASEKCINTFCIYLFA AA ACIAAL LGLVVVRVKTPTVKL
Sbjct: 1   MAAGEPPNDRPATLRSRRKASEKCINTFCIYLFAIAAVACIAALILGLVVVRVKTPTVKL 60

Query: 61  TSVAVRNLHYGFSPTPFMDATLIAEIAIGNPNFGKFRYEEKTNVTLIYYGVAVGIGEVKG 120
           TSV V+NLHYGFSPTPFMDATLIAEI + NPNFG+F+YEE TN TLIYYGVAVGIGEVK 
Sbjct: 61  TSVTVKNLHYGFSPTPFMDATLIAEITMENPNFGEFKYEEVTNTTLIYYGVAVGIGEVKT 120

Query: 121 VSVNAKGVEETKLTVKVKPNSSFVDVDYFSDDLARLKTMNMSCIAEFEGRVRLLKLFKEK 180
           VSVNAK  +    TVKVKPNSSFVDVDYFS DLA LKTMNMSCIAEF+GRVRLLKLFKEK
Sbjct: 121 VSVNAKSNKNANFTVKVKPNSSFVDVDYFSHDLAMLKTMNMSCIAEFKGRVRLLKLFKEK 180

Query: 181 KVSVLKCTMTLNLTSHGVQNIAC 204
           KVS+LKCTM+LNL+SHGVQN+AC
Sbjct: 181 KVSMLKCTMSLNLSSHGVQNLAC 203

[Close]

BLAST of Lcy02g013310 vs. NCBI nr
Match: XP_023550526.1 (late embryogenesis abundant protein At1g64065 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 327.4 bits (838), Expect = 8.8e-86
Identity = 169/203 (83.25%), Postives = 182/203 (89.66%), Query Frame = 0


Query: 1   MAAEETSGDRPATLPSRRRASEKCINTFCIYLFAAAATACIAALTLGLVVVRVKTPTVKL 60
           MAA +   DRPATL SRR+ASEKCINTFCIYLFA AA ACIAAL LGLVVVRVKTPTVKL
Sbjct: 1   MAAGQPPNDRPATLRSRRKASEKCINTFCIYLFAIAAVACIAALILGLVVVRVKTPTVKL 60

Query: 61  TSVAVRNLHYGFSPTPFMDATLIAEIAIGNPNFGKFRYEEKTNVTLIYYGVAVGIGEVKG 120
           TSV V+NLHYGFSPTPFMDATLIAEI + NPNFG+F+YEE TN TLIYYGVAVGIGEVK 
Sbjct: 61  TSVTVKNLHYGFSPTPFMDATLIAEITMENPNFGEFKYEEVTNTTLIYYGVAVGIGEVKT 120

Query: 121 VSVNAKGVEETKLTVKVKPNSSFVDVDYFSDDLARLKTMNMSCIAEFEGRVRLLKLFKEK 180
           VSVNAK  ++   TVKVKPNSSFVDVDYFS DLA LKTMNMSCIAEF+GRVRLLKLFKEK
Sbjct: 121 VSVNAKSNKKANFTVKVKPNSSFVDVDYFSHDLAMLKTMNMSCIAEFKGRVRLLKLFKEK 180

Query: 181 KVSVLKCTMTLNLTSHGVQNIAC 204
           KVS+LKCTM+LNL+SHGVQN+AC
Sbjct: 181 KVSMLKCTMSLNLSSHGVQNLAC 203

[Close]

BLAST of Lcy02g013310 vs. NCBI nr
Match: XP_022929131.1 (late embryogenesis abundant protein At1g64065 [Cucurbita moschata])

HSP 1 Score: 325.9 bits (834), Expect = 2.5e-85
Identity = 169/203 (83.25%), Postives = 180/203 (88.67%), Query Frame = 0


Query: 1   MAAEETSGDRPATLPSRRRASEKCINTFCIYLFAAAATACIAALTLGLVVVRVKTPTVKL 60
           MAA E   DRPATL SRR+ASEKCINTFCIYLFA AA ACIAAL LGLVVVRVKTPTVKL
Sbjct: 1   MAAGEPPNDRPATLRSRRKASEKCINTFCIYLFAIAAVACIAALILGLVVVRVKTPTVKL 60

Query: 61  TSVAVRNLHYGFSPTPFMDATLIAEIAIGNPNFGKFRYEEKTNVTLIYYGVAVGIGEVKG 120
           TSV V+NLHYGFSPTPFMDATLIAEI + NPNFG+F+YEE TN TLIYYGVAVGIGEVK 
Sbjct: 61  TSVTVKNLHYGFSPTPFMDATLIAEITMENPNFGEFKYEEVTNTTLIYYGVAVGIGEVKT 120

Query: 121 VSVNAKGVEETKLTVKVKPNSSFVDVDYFSDDLARLKTMNMSCIAEFEGRVRLLKLFKEK 180
           VSVNAK  ++    VKVKPNSSFVDVDYFS DLA LKTMNMSCIAEF+GRVRLLKLFKEK
Sbjct: 121 VSVNAKSNKKANFKVKVKPNSSFVDVDYFSHDLAMLKTMNMSCIAEFKGRVRLLKLFKEK 180

Query: 181 KVSVLKCTMTLNLTSHGVQNIAC 204
           KVS+LKCTM+LNL SHGVQN+AC
Sbjct: 181 KVSMLKCTMSLNLNSHGVQNLAC 203

[Close]

BLAST of Lcy02g013310 vs. NCBI nr
Match: XP_022145906.1 (late embryogenesis abundant protein At1g64065 [Momordica charantia])

HSP 1 Score: 299.3 bits (765), Expect = 2.6e-77
Identity = 152/203 (74.88%), Postives = 171/203 (84.24%), Query Frame = 0


Query: 1   MAAEETSGDRPATLPSRRRASEKCINTFCIYLFAAAATACIAALTLGLVVVRVKTPTVKL 60
           MAA+ETSGDRPATL SRRRASE+CIN  CIYLFA AA AC+A L LGL VVRVKTPT KL
Sbjct: 1   MAAQETSGDRPATLRSRRRASERCINACCIYLFAGAAAACVAVLILGLTVVRVKTPTAKL 60

Query: 61  TSVAVRNLHYGFSPTPFMDATLIAEIAIGNPNFGKFRYEEKTNVTLIYYGVAVGIGEVKG 120
           +SVAV+NL YGFSP PF+DATLIAE+ I NPNFG+F+YEE T+ + IYYGVA GIGEVK 
Sbjct: 61  SSVAVKNLSYGFSPNPFVDATLIAEVTIENPNFGEFKYEENTDASFIYYGVAAGIGEVKR 120

Query: 121 VSVNAKGVEETKLTVKVKPNSSFVDVDYFSDDLARLKTMNMSCIAEFEGRVRLLKLFKEK 180
           VSVNAKGV+ T  +V+VK N+S  DVDY S DLA LK MNMSCIAEFEGRVRLLKLFKE 
Sbjct: 121 VSVNAKGVKRTSFSVEVKTNASVADVDYMSYDLASLKRMNMSCIAEFEGRVRLLKLFKEM 180

Query: 181 KVSVLKCTMTLNLTSHGVQNIAC 204
           KVS+LKCTMTLN +SH + N+AC
Sbjct: 181 KVSLLKCTMTLNFSSHAIHNLAC 203

[Close]

BLAST of Lcy02g013310 vs. NCBI nr
Match: XP_008437351.1 (PREDICTED: late embryogenesis abundant protein At1g64065 [Cucumis melo] >KAA0042715.1 late embryogenesis abundant protein [Cucumis melo var. makuwa])

HSP 1 Score: 297.7 bits (761), Expect = 7.4e-77
Identity = 152/204 (74.51%), Postives = 174/204 (85.29%), Query Frame = 0


Query: 1   MAAEETSGDRPATLPSRRRASEKCINTFCIYLFAAAATACIAALTLGLVVVRVKTPTVKL 60
           MAA++  GDRP    SRR++S+KC+N FCI LFAAAATACIAALT GLVV+RVKTPTVKL
Sbjct: 1   MAADKIPGDRPTAHRSRRKSSKKCLNAFCICLFAAAATACIAALTFGLVVLRVKTPTVKL 60

Query: 61  TSVAVRNLHYGFSPTPFMDATLIAEIAIGNPNFGKFRYEEKTNVTLIYYGVAVGIGEVKG 120
           TSVAV+NLHYGFSPTPFM+ATL  EI + NPN+G F YE   NVTLIYYGV VGIGEVK 
Sbjct: 61  TSVAVKNLHYGFSPTPFMEATLTGEITMENPNYGAFEYEGVRNVTLIYYGVVVGIGEVKR 120

Query: 121 VSVNAKGVEETKLTVKVKPNSSFVDVDYFSDDLARLKTMNMSCIAEFEGRVRLLKLFKEK 180
           +SVNAK +E+ K  VKVKPN  FV+VDYFSDDLARLKTMNMS  AEFEG++ LLKLFKEK
Sbjct: 121 LSVNAKSIEKRKFIVKVKPNWRFVNVDYFSDDLARLKTMNMSWNAEFEGKIYLLKLFKEK 180

Query: 181 KVSVLKCTMTLNLTSHGVQNIACL 205
           K+SV+KC+ +LNLTSHGVQN+ACL
Sbjct: 181 KISVMKCSTSLNLTSHGVQNLACL 204

[Close]

BLAST of Lcy02g013310 vs. TAIR 10
Match: AT1G64065.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 81.3 bits (199), Expect = 1.0e-15
Identity = 68/203 (33.50%), Postives = 106/203 (52.22%), Query Frame = 0


Query: 4   EETSGDRPATLPSRRRASEKCINTFCIYLFAAAATACIAALTLGLVVVRVKTPTVKLTSV 63
           EE SG R       RR +E+      +Y            L L  + +R+  P ++  S+
Sbjct: 20  EEQSGPR-----IWRRKTEEPPGKCLVYSLTIIVIIFALCLILSSIFLRISKPEIETRSI 79

Query: 64  AVRNLHYGFSPT-PFMDATLIAEIAIGNPNFGKFRYEEKT-NVTLIYYGVAVGIGEVKGV 123
           + R+L  G + T P+ +ATL+++I+I N NFG F +E+ T  V    +GV VG  +++G 
Sbjct: 80  STRDLRSGGNSTNPYFNATLVSDISIRNSNFGAFEFEDSTLRVVYADHGV-VGETKIEGR 139

Query: 124 SVNA-KGVEETKLTVKVKPNSSFVDVDYFSDDLARLKTMNMSCIAEFEGRVRLLKLFKEK 183
            V A K V  T + V++  +   +D      DL RL  + +  +AE  GR+++L   K  
Sbjct: 140 RVEAHKTVRITGVVVEI-GSFRLLDTKDLDKDL-RLGFLELRSVAEVRGRIKVLGR-KRW 199

Query: 184 KVSVLKCTMTLNLTSHGVQNIAC 204
           KVSV+ CTM LNLT   +QN+ C
Sbjct: 200 KVSVMSCTMRLNLTGRFIQNLLC 213

The following BLAST results are available for this feature:

BLAST of Lcy02g013310 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6DST1	1.4e-14	33.50	Late embryogenesis abundant protein At1g64065 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of Lcy02g013310 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I1W2	2.5e-86	83.74	late embryogenesis abundant protein At1g64065 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1EM85	1.2e-85	83.25	late embryogenesis abundant protein At1g64065 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1CXS7	1.2e-77	74.88	late embryogenesis abundant protein At1g64065 OS=Momordica charantia OX=3673 GN=...	[more]
A0A5A7TMT1	3.6e-77	74.51	Late embryogenesis abundant protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A1S3AUE7	3.6e-77	74.51	late embryogenesis abundant protein At1g64065 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]

BLAST of Lcy02g013310 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022970100.1	5.1e-86	83.74	late embryogenesis abundant protein At1g64065 [Cucurbita maxima] >KAG6579536.1 L...	[more]
XP_023550526.1	8.8e-86	83.25	late embryogenesis abundant protein At1g64065 [Cucurbita pepo subsp. pepo]	[more]
XP_022929131.1	2.5e-85	83.25	late embryogenesis abundant protein At1g64065 [Cucurbita moschata]	[more]
XP_022145906.1	2.6e-77	74.88	late embryogenesis abundant protein At1g64065 [Momordica charantia]	[more]
XP_008437351.1	7.4e-77	74.51	PREDICTED: late embryogenesis abundant protein At1g64065 [Cucumis melo] >KAA0042...	[more]

BLAST of Lcy02g013310 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G64065.1	1.0e-15	33.50	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31852	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY	coord: 20..203
None	No IPR available	PANTHER	PTHR31852:SF157	LATE EMBRYOGENESIS ABUNDANT PROTEIN	coord: 20..203
None	No IPR available	SUPERFAMILY	117070	LEA14-like	coord: 43..140

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy02g013310.1	Lcy02g013310.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane