Lcy02g010940 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy02g010940
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Protein SDA1
Location	Chr02: 32969264 .. 32977863 (+)
RNA-Seq Expression	Lcy02g010940
Synteny	Lcy02g010940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGAAACAACACCTTCCAGATGGTGCTTACTTCTACAAGTCTCTTGTTGAACTGAGGAAGCTGCAGTTTGTCCTTGATGTTGAAGAGTCAAGGGCTGCAATTGAGGATTTGAGTTGCAGGTTTCTTGCTGAATTGGGAACACAGCAACTTGTTCCTGTTGCAGAGAGCTTTCAAAATGGAAATTTTGATCTTCTTTGTTTGTTGCAGAGCCACCATCATCTGCTATTTGTTCTTATTCCAGCATGTGTTGATTCCCACTTAGATTTGACATTTCCACATCTATGATTTTAGTGTTTGATAGAGGTTTGGCACAAGTCTTAGCAGTTGCGCTGTGGTTGTTATTAGACCAATCTTCAATCCCTTGGAACTCAGAAACAACAAGAGTGTTTTCTTTTTTCACTCAAATTATTGTTAGTTAATTTTGCATCGAAGACAACATGTCTGGATATATAGGAACAAAAAAACAGAGTATATAAACCATTCTAACTAACAAGCAATAACCAAAATGAAACTTATCCCACAAACAACCCATGGCGGATAGTTTCAATGAACTTAAAAGCTCTGATACCATTTAGAACTTCAAAACAAGGGTATAGAGAAATTGATCTGCTTTCAATAATCTGTTAAATTTAATACCAACTTGCATAGCAAGCTGTGAACTATACGTTACACAAAAGACAAAATTAGCCCAAAGAAAATAAATGTTCCACTGGTAATAATAAGATACAACCAATCCAATACTTTCCTTGTATGTAAATGAGGATTTTGCGAATCCAAACTATCAAAAAAATAGAAGAAAATGCCGTTGGAGATTGCCTTTGATGCGGCAAAAATTATAGGGATTTTCATACAACTTGGTGTTGACAAAGGAAACCATTTAACTGTACTATGGACTTAAGTTAGGTAGCTACAACATCTTCTCCAACAAACTTTAACACCTAATTATTTCAGTACATACTTTTTAATTAATTTGTATTTGCTTATAAATTTCATCAACAAATTATCTTTTTGTAGATGAGGATTTGGATGCTGTTGGATCTGTTTCTTTCCATGCTGAAGAAGAAATTCTTGCTTTTACAGTATCTGAAAAGGTGAAGTTTCCTACCCTCACACCCATCTTCTAATATTTATGACAGTTTTATATATTTAAATCATTTTAATTTAATTATTATTCAATAACTCCAGTTACATATTTGGAGATACAAGCAAGGCAGTGATTTTTATAATATACTAACTGCATCAGGACCAATTCGAAAAGTTCAATTCCATCCACTGGGTGCGCCATATATATTGACGACTGAGGTAAATCATTTGAGCATAGTTTCATTTTTTAATATAGTTAAAAAACACTTTTGGTCTCTGAACTTTCATTAAGTAACGATTTATAGTCCTTAAACTTTTCAAAGTAACGATCTAGTCCCTGTACTTTCATATTAGCCGTAACAATTTAGTCCCTGAACTTTTATATTCTTTGATATAACATGCATGCACATAGGTGAATAGAAAATTCAGGCGTAGCTTGGTCATAGCATTTTGTGGTTTTGATCCAGAAGGCTTGGATGATATACTTTTTACCACCACCATTAAATCAGGTGACAAGAAGAATTTCACTACTCAACTACTAGTTACATAATGGCCGTTCGTTAATAGTCTACATTTTTTTTTAGATATTAGAATCGATTTAAGTCCAAGTTGGAGTTGTGCACCAAGATTTCGGATTCGTCGAAATGCTAAAAGTAATTACTCGACGTTGCATTTGATTAACCCTCTTGACTTCTTTACTCCACCCGCGATGTCGAGATTGTCTCTGAATGCTCAAGCTGTGGTGGAGCGCCTCCATATTGTGAAACTAAAAGTTTGGCGATATGATTCGATAGGCGACCATGTGCTTAACAACCATCGTTTGTGCATACGGAACGTCATTCTAAACTAGTAATTGTACACTTAAGTTGATGGGTTGGGTAAATTTAACTGGTAATTGTACACTTAAGTTGATATGTTGGGTAAATTTAATTTTGGATATCTTAACAGACTTTGATATGCAGTGGAAGGAGTGCAGATATCTCTCCATGCGACAAGTTTCTGGTTACTTGTGTCGTTAAGAGGAGAGAAGCTAAGAAGAGGATCTTCGAATTATTTCCTGAGGAAAAGTTCGATCACTCCACAGTTTGCACGCTTGTATATCATATACGTGTGTATTCTATAGCAGATTCCAGGTAGTAGGACATTTATAAATATTTCCGTTTTATGAGGCGTTCGCTTTTGTTAAAAATTGAATAAATATTTTTGTTATAATATTGTTTGTTTGTTTGTTTTTGCATGAAATAGTTTTGGCAAAATTATATAAAAAAAAAAGAATCAGAGCTGGTTATGCCGTGAATGCAATTCAGGTTTGTTGAAGTTTATAAGTTTACATTGATTTTTTCATTAAATTTGCATGCATGCATAAGCTAGAATAAGAAATGCAAGATACGATTGCAGTTTTCCCCAACTTCAGAATATATCTTAGTCGGGTATGGGAAAAGGCATAGTTCGCTTGTCTCGGGAGTAGAAATGAAAGCTGGGAAGGTTGTGCATGCATTTACCATACTGGAGGTAATTAATTGTACATTTAAATAGTATAGCTTCAAGCAAATGACACTTTTTAGGTTAAAAAACACATTTGGTCCCTAGGTCATTACTTTTGAAACTTCAAGGACTAAATCGATACTTTAATGAAAGTTCAAGGACCAAAAGTGGTTTTTTAACCCATATTTTTATTATCTGACTTTATGTTTCCCAAGCTCATATTTATCGAATCTCCGACATGGAACTTGTGGGAACCGTGAGGTAGTTCAACAGAGGTGACCAGCGTGGCATGCTTCCATCCAGAGCCTGGAGAAGGTATAGTCTATTGCACAAAGGTATGTGGACAAATGACTTTACATATATATAATATTGTAATTGTATGATTATTTTTGTATGCTTTGGATGCTAAATACTAATTTATTTAGAAAATTTGTTTAGGATTGGAAGCGACGAAAAGTTAAGGTTCTCACACGTCACCCAGAAAAGGAAGAAAACTAAACTGAGAAGATGGTTTGGTTTAGGCGGCTAAGATCATTTTTGTCGAAGGTAATTCAAATACATTTTGTGTTATGAACGAAAAGGAAAAATATTGGAGAAAAAAGAAAGAAAATGTTGCAGATAGTTTAAGTGGTTCTAGCTAGTTGTTTTTTTTTTTTTGGAATTGAAAGTTTTTGGGTTTATAAGGGTGAAATATATGTTATCCCATCTTAAACCTACTTGAGTTTCAAAAACTTTTAATTCAAAAAAAACCAGCTAGAACCACTTAAACCATCTGCAACATTTTCTTTCTTTTTTCTCCAATATTTTTCCTTTTCGTTCATAACACAAAATGTATTTGAATTACCTTCGACAAAAATGATCTCAGCCGCCTAAACCAAACCATCTTCTCAGTTTAGTTTTCTTCCTTTTCTGGGTGACGTGTGAGAATCTTAACTTTTCGTCGCTTCCAATCCTAAACAAATTTTCTAAATAAATTAGTATTTAGCATCCAATGCATACAAAAATAATCATACAATTACAATATTATATATATGTAAAGTCATTTGTCCACAAACCTTTGTGCAATAGACTATACCTTCTCCCACGTTGGTCACCTCTGTTGAACTACTCACGCTTCCCACAAGTTCCATGTCAGAGATCCGATAAATCTGAGCTTGGGAAACATCATGTCAGATAATAAAAACATGGGTTAAAAAACACTTTTGGTCCTTGAACTTTCATTAAAGTATCGATTTAGTCCTTGAAGTTTCAAAAGTAATGACTTAGGGACCAAATGTGCTTTTTAACCTAAAAGGTGTCATTTGCTTGAAGCTATACTATTTAAATGTACAATTTGTAAGGGATTATAGGACACTACACATATCTCCACAATGGTATGATATTGTCAACTTTGGGCATAAGCACTCGTGACTTTGCTTTTGGTTTACCCCAAAAGGCCTCATACCAGTGGAGATAGTTGTCCTTCCTTATAAACCCATGGGCATCCCTTTATCTAGCCAATGTGGGACTTTGGTCGCACTCCCAACACAATTAATTACCTCCAGTATGGTTTGCATGCGCAAGTTTCCCAGTTTTCATTTCTACTCCCGAGACAAGCGAACTATGCCTTTTCCCATACCCGACTAAGATATATTCTGAAGTTGGGGAAAACTGCAATCGTATCTTGCATTTCTTATTCTAGCTTATGCATGCATGAAAATTTAATGAAAAAATCAATGTAAACTTATAAACTTCAACAAACCTGAATTGCATTCACGGCATAACCAGCTCTGATTTTTTTTCTTTATATATAATTTCGCCAAAACTATTTCATGCAAAAACAAACAAACAAACAATATTATAATAAAAATATTTATTCAATTTTTAACAAAAGCGAACGCCTCATAAAACAGAAATATTTATAAATGTCCTACTACCTGGAATCTGCTATAGAATACACGCATATATAATATCCAAGTGTGCAAACTGTGGAGTGATCGAACTTTTCCTCAGGAAATAATTCGAAGATCCTCTTCTTAGCTTCTCTCCTCTTAACGACACAAGCAACCAGAAACTTGCTGCATGGAGAGATATCTGCACTCCTTTCACTGCATATCAAAGTCTGTTAAGATATCCAAAATTAAATTTACCCAACCCATCAACTTAAGTGTACAATTACCAGTTAAATTTACCCAACCCATCAACTTAAGTGTACAATTACTAGTTTAGAATGACGTTCCGTATGCACAAACGATGGTTGTTAAGCACATGGTCGCCTATCGAATCATATCGCCAAACTTTTAGTTTCACAATATGGAGGCGCTCCACCACAGCTTGAGCATTCAGAGACAATCTCGACATCGCGGGTGGAGTAAAGAAGTCAAGAGGGTTAATCAAATGCAACGTCGAGTAATTACTTTTAGCATTTCGACGAATCCGAAATCTTGGTGCACAACTCCAACTTGGACTTAAATCGATTCTAATATCTAAAAAAAAATGTAGACTGTTAACGAACTGCCATTATGTAACTAGTAGTTGAGTAGTGAAATTCTTCTTGTCACCTGATTTAATGGTGGTGGTAAAAAGTATATCATCCAACCCTTCGATCAAAACCATAAAATGCTATGACCAAGCTACGCCTGAATTTTCTATTCACCTATGTGCATGCATGTTATATCAAAGAATATAAAAGTTTAGGGACTAAATTGTTACGGCTAATATGAAAGTACAGGGACTAGATCGTTACTTTGAAAAGTTTAAGGACTATAAATCGTTACTTAATGAAAGTTCAGAGACCAAAAGTGTTTTTTAACTATATTAAAAAATGAAACTATGCTCAAATGATTTACCTCAGTCGTCAATATATATGGCGCACCCAGTGGATGGAATTGAACTTTTCGAATTGGTCCCGATGCAGTTAGTATATTATAAAAATCACTGCCTTGCTTGTATCTCCAAATATGTAACTGGAGTTATTCAATAATAATTAAATTAAAATGATTTAAATATATAAAACTATCATAAATATTAGAAGATGGGTGTGAGGGTAGGAAACTTCACCTTTTCAGATACTGTAAAAGCAAGAATTTCTTCTTCAGCATGGAAAGAAACAGATCCAACAGCATCCAAATCCTCATCTACAAAAAGATAATTTGTTGATGAAATTTATAAGCAAATACAAATTAATTAAAAAGTATGTACTGAAATAATTAGGTGTTAAAGTTTGTTGGAGAAGATGTTGTAGCTACCTAACTTAAGTCCACAGTACAGTTAAATGGTTTCCTTTGTCAACACCAAGTTGTATGAAAATCCCTATAATTTTTGCCGCATCAAAGGCAATCTCCAACGGCATTTTCTTCTATTTTTTGATAGTTTGGATTCGCAAAATCCTCATTTACATACAAGGAAAGTATTGGATTGGTTGTATCTTATTATTACCAGTGGAACATTTATTTTCTTTGGGCTAATTTTGTCTTTTGTGTAACATATAATTCACAGCTTGCTATGCAATTATAATATAGGTTTGTTAGGACAGGTGGCAGGTCGTGCTTTTTCCAGAAGCGCGACGACACTTGAATAAATATATATGTAATCTCTGAAAAGCATGAACTGTTATTGTGTGATGATTGGTTGTAAAGCTTGCTTGTTTTGTTATGCATTCATGAGTTAAGCATGAGTCGTGAGCAAGTTGTTGTATGTATATACTTGGTGGGCATATGAGTCTAGAAGCATGTTGCAGGGCATATGCATTATAGATAGATGTGAGAAAGAAGTTAGGGACCTAAATGTGAAACAAAGGAATGATGAGTGAATGTCAGTGCACCTCGGGTACAAATGGTCGAGGGGTGACATGTCACCATTGGTTTTAAGAGAGCATCAAGGCCTTGGATACAAATGGTCAAGGGTTGGTGTGATGAGTCTAGAAAGCAAGTATTGGGCGCCTGGGGAAGGGCCAATACTTTGCTAAGTCATCGGTGCACCTTGAGTACAAATGGCCAAGGGGTGATGCACAGTTCGAGGCCTTGGGTACAAATGGTCAAGGGTCGAACGTCGAGCTCCATAGAGAGCATTGTGGCCCTGGGTACAAATGGTCAGGGGACTGTCCGACTCGAAGGATCAGTCTTGGAGAGCCATGTGAGGGCTAAACATGAGTGTTGAGTGAGCTCATGGAGCATGAGTGGTTAGTGAGTTGCATAGAGAGATGCATGAGGTTTGGCTTAGGAGAGTCAATCATTTTACTCACTTTTGAGCATGTTGATGTGTTTATAGCTTTAAGATGTATGCTGTTTGCGCATGAAAAGCATGTTGTTTGCTTGGTTGTTGTTTGATGGCTTCTCAGGTAGGGGTTGCTTACCAGTACTGTGGTTGTACTGACCCCTTCCCCTTCTTTCCTCCAACATTTTAGTTAGATTATGCAGGTTATGAGGACTGCCTTGACCATGGTGATGCAGAGGAGACGCATGAGGAAGGACCATAGCTAGATAGCGTTATTTTCCTTTATATTCTTATCTTGGTTAGGGTAGTGTTGCTTTCATTGGTTGGACAACTGTTTGTTCTATTTGTTTTAGTTCTGAATCTATTCTTGTTGAATTCTAGGCTTAGTTGTGTTTGTTTTAAAGAACTCTATCTCTTCTTTTAGTTAATGATAATTAAGTTTGTTCGAATAAACTAAAGTTATAAGCTTTGTTAAGGTTGTGTTTTTGGTTAGATAGTCGTTGATAACACGAGACCTGACTCGCTTGTTTGTCTGGAGTTCTGCTGTGTTGTGGAAAATGTTATAGAAGTGTTACTCTTGTTCTAACAGGTCTTTGGAAAATTTTGGGTTAGTCCTATGTATGTCGTTATGTTGCCGAAATTTTCGGTGCACTCGGTTAGTTTTGTCATGAGTTAGTAATGTCACTAGGTTAGTAGTTTATAAAAACATGGGGAGTTAGTAATTACCTAGCAGAAACAATGAGGCTGATGGAATCCTTATTTGAAGAACATCTGCATAATTCAACTTAACATGAAAAAGAATCCAAAAAAATACATCAACTGTTTTTGGACTCTTTGCTGCAATAGAAACTTGCAATTATAAATTTTATTTGTTGATTTGTATGATTTTACAGTCAGTCATACTCTTCTCTTGAACTCAGTTATTTCTTATAAGTAATTTAAGCTTCTTTTTTCGATTCAGGTTCCTCCTGATGCTGTTGAACCATTGTTCAAACAGATTGTAAATCAATTTGTGCACGATCGTTCACGAACAGAGGTGTTTGTTTAATTGACAGTGTTTTATATTGATCCTATCAACTTTGTGAACTCAAACTCAAAGTTCTATTGTTCTTTTTCAGGCCATTGTGGTTGGGCTCAATGCAGTAACCCATATATGTGAACGAATGCCTTTGGTAACTTTCATTACCTAGATGTTATAATGAGTATTTTATGTGATTTACTGTTTCTTCAATATTCTTGAACTCTTTCTATGTATTGCATGCCTTCATTTTATGTTTTCTTGATTTTATTATGTGTATTTATACACTTATTTTGATATGATGTGAACTTCTGTTTTTTTTTTTTTTTTGACGAAATCAAATACTATACCTTAATATGTTCTCTATTTTGTACTGGACTGGATGTAGATTAACTTACCAACATTTTTTATACTATAGGATTCTATCATGTGTCATGTAATGCAATTATTATTATTGATATTTTTTGTGTTTTCGGTAACTCTTTTTAATAGTAATCTTTTATCCTTGCTAACTAGTTAATGACAGAAGGTTTGCTACAAGATCTTGCGTTGTACAAGAAATCCCGTGACAAGGCACTTTCTGGAGCTGCGCAATCACTTATTGCATCATTTCAATCGGTATACATATAAAAATTTGACAAGTTCTCTCCATTTTTAATAGTGCATTCGTAGTGAGACAGCAGGCTGACAACTTCTATATTTGTAGATTTGCCCATCCTTCCTGGGTAAGAAGGATCGTGGCCGTCCTACTAATCCAAAGGCAAGACCGAATGCTTACGGGGAAGTATCTGAAGTATGCGATATTCCTGGTACCTAG

mRNA sequence

ATGTGGAAACAACACCTTCCAGATGGTGCTTACTTCTACAAGTCTCTTGTTGAACTGAGGAAGCTGCAGTTTGTCCTTGATGTTGAAGAGTCAAGGGCTGCAATTGAGGATTTGAGTTGCAGGTTTCTTGCTGAATTGGGAACACAGCAACTTGTTCCTGTTGCAGAGAGCTTTCAAAATGGAAATTTTGATCTTCTTTCTCATATTTATCGAATCTCCGACATGGAACTTGTGGGAACCGTTCCTCCTGATGCTGTTGAACCATTGTTCAAACAGATTGTAAATCAATTTGTGCACGATCGTTCACGAACAGAGGCCATTGTGGTTGGGCTCAATGCAGTAACCCATATATGTGAACGAATGCCTTTGTTAATGACAGAAGGTTTGCTACAAGATCTTGCGTTGTACAAGAAATCCCGTGACAAGGCACTTTCTGGAGCTGCGCAATCACTTATTGCATCATTTCAATCGATTTGCCCATCCTTCCTGGGTAAGAAGGATCGTGGCCGTCCTACTAATCCAAAGGCAAGACCGAATGCTTACGGGGAAGTATCTGAAGTATGCGATATTCCTGGTACCTAG

Coding sequence (CDS)

ATGTGGAAACAACACCTTCCAGATGGTGCTTACTTCTACAAGTCTCTTGTTGAACTGAGGAAGCTGCAGTTTGTCCTTGATGTTGAAGAGTCAAGGGCTGCAATTGAGGATTTGAGTTGCAGGTTTCTTGCTGAATTGGGAACACAGCAACTTGTTCCTGTTGCAGAGAGCTTTCAAAATGGAAATTTTGATCTTCTTTCTCATATTTATCGAATCTCCGACATGGAACTTGTGGGAACCGTTCCTCCTGATGCTGTTGAACCATTGTTCAAACAGATTGTAAATCAATTTGTGCACGATCGTTCACGAACAGAGGCCATTGTGGTTGGGCTCAATGCAGTAACCCATATATGTGAACGAATGCCTTTGTTAATGACAGAAGGTTTGCTACAAGATCTTGCGTTGTACAAGAAATCCCGTGACAAGGCACTTTCTGGAGCTGCGCAATCACTTATTGCATCATTTCAATCGATTTGCCCATCCTTCCTGGGTAAGAAGGATCGTGGCCGTCCTACTAATCCAAAGGCAAGACCGAATGCTTACGGGGAAGTATCTGAAGTATGCGATATTCCTGGTACCTAG

Protein sequence

MWKQHLPDGAYFYKSLVELRKLQFVLDVEESRAAIEDLSCRFLAELGTQQLVPVAESFQNGNFDLLSHIYRISDMELVGTVPPDAVEPLFKQIVNQFVHDRSRTEAIVVGLNAVTHICERMPLLMTEGLLQDLALYKKSRDKALSGAAQSLIASFQSICPSFLGKKDRGRPTNPKARPNAYGEVSEVCDIPGT

Homology

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BLAST of Lcy02g010940 vs. ExPASy Swiss-Prot
Match: A7S6A5 (Protein SDA1 homolog OS=Nematostella vectensis OX=45351 GN=sdad1 PE=3 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.1e-23
Identity = 58/114 (50.88%), Postives = 78/114 (68.42%), Query Frame = 0


Query: 81  VPPDAVEPLFKQIVNQFVHDRSRTEAIVVGLNAVTHICERMPLLMTEGLLQDLALYKKSR 140
           VPP+ VEP  + IVN FV +R+  E + VGLNAV  +C+R PL+MT+ LLQDLA YK S+
Sbjct: 360 VPPEVVEPGVRTIVNNFVTERNSHEVMAVGLNAVREVCQRCPLVMTDTLLQDLAQYKTSK 419

Query: 141 DKALSGAAQSLIASFQSICPSFLGKKDRGRPTNPK--ARPNAYGEVSEVCDIPG 193
           DK++  A+QSLI  F+S+ P+ L KKDRG+PT  +  ++P  Y  V     IPG
Sbjct: 420 DKSVMMASQSLIQLFRSVNPNLLHKKDRGQPTESREDSKPLDYAAVEAKDYIPG 473

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BLAST of Lcy02g010940 vs. ExPASy Swiss-Prot
Match: A4IIB1 (Protein SDA1 homolog OS=Xenopus tropicalis OX=8364 GN=sdad1 PE=2 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.3e-20
Identity = 55/114 (48.25%), Postives = 75/114 (65.79%), Query Frame = 0


Query: 81  VPPDAVEPLFKQIVNQFVHDRSRTEAIVVGLNAVTHICERMPLLMTEGLLQDLALYKKSR 140
           VPP+  + + + I N FV DR+  E + VG+NA+  +  R PL MTE LLQDLALYK  +
Sbjct: 365 VPPEISQSVLRTIANNFVTDRNSGEVMTVGINAIKELTARCPLAMTEELLQDLALYKTHK 424

Query: 141 DKALSGAAQSLIASFQSICPSFLGKKDRGRPT--NPKARPNAYGEVSEVCDIPG 193
           DK +S +A+SLI  F+S+ P  L KK RG+PT  + +AR +AYGE+     IPG
Sbjct: 425 DKNVSMSARSLIQLFRSLNPEMLQKKFRGKPTEASKEARIHAYGELDAKDYIPG 478

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BLAST of Lcy02g010940 vs. ExPASy Swiss-Prot
Match: Q2VPG3 (Protein SDA1 homolog OS=Xenopus laevis OX=8355 GN=sdad1 PE=2 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 2.8e-20
Identity = 55/114 (48.25%), Postives = 73/114 (64.04%), Query Frame = 0


Query: 81  VPPDAVEPLFKQIVNQFVHDRSRTEAIVVGLNAVTHICERMPLLMTEGLLQDLALYKKSR 140
           VPP+  + + K I N FV DR+  E + VG+NA+  +  R PL MTE LLQDLA YK  R
Sbjct: 365 VPPEISQSVLKTIANNFVTDRNSGEVMTVGINAIKEVTARCPLAMTEELLQDLAQYKTHR 424

Query: 141 DKALSGAAQSLIASFQSICPSFLGKKDRGRPT--NPKARPNAYGEVSEVCDIPG 193
           DK +S +A+ LI  F+S+ P  L KK RG+PT  + +AR +AYGE+     IPG
Sbjct: 425 DKNVSMSARGLIQLFRSLNPDMLQKKFRGKPTEASKEARIHAYGELDAKDYIPG 478

[Close]

BLAST of Lcy02g010940 vs. ExPASy Swiss-Prot
Match: Q7KKH3 (Protein SDA1 homolog OS=Drosophila melanogaster OX=7227 GN=Mys45A PE=1 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.4e-19
Identity = 49/105 (46.67%), Postives = 69/105 (65.71%), Query Frame = 0


Query: 81  VPPDAVEPLFKQIVNQFVHDRSRTEAIVVGLNAVTHICERMPLLMTEGLLQDLALYKKSR 140
           VP D +EP+ K I N F+ +R+ ++ + +GLNA   IC R PL M E LLQDLA+YK  +
Sbjct: 365 VPGDIIEPILKTIANNFITERNSSDVMAIGLNATREICMRCPLAMGEDLLQDLAMYKTYK 424

Query: 141 DKALSGAAQSLIASFQSICPSFLGKKDRGRPTNPKA--RPNAYGE 184
           +K++  AA+SLI  ++   P+ L KKDRGR T  +A  +  AYGE
Sbjct: 425 EKSVMMAARSLITLYREQLPALLHKKDRGRQTEAQAERKVRAYGE 469

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BLAST of Lcy02g010940 vs. ExPASy Swiss-Prot
Match: Q6NV26 (Protein SDA1 homolog OS=Danio rerio OX=7955 GN=sdad1 PE=2 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 3.1e-19
Identity = 50/114 (43.86%), Postives = 71/114 (62.28%), Query Frame = 0


Query: 81  VPPDAVEPLFKQIVNQFVHDRSRTEAIVVGLNAVTHICERMPLLMTEGLLQDLALYKKSR 140
           VPP+ +EP+   I N FV DR+  E + VG+NA+  +  R PL M+E LLQDL  YK  +
Sbjct: 365 VPPEIIEPVIMTIANNFVTDRNSGEVMTVGINAIKEVVARCPLSMSEDLLQDLTQYKSHK 424

Query: 141 DKALSGAAQSLIASFQSICPSFLGKKDRGRPT--NPKARPNAYGEVSEVCDIPG 193
           DK +  +A+ LI  F+ + P  L +KDRGRPT  + +A+ + YGE+     IPG
Sbjct: 425 DKNVVMSARGLIQLFRDLNPKMLTRKDRGRPTESSKEAKIHKYGELEAKDYIPG 478

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BLAST of Lcy02g010940 vs. ExPASy TrEMBL
Match: A0A6J1D5Q3 (Protein SDA1 OS=Momordica charantia OX=3673 GN=LOC111017865 PE=3 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 7.9e-42
Identity = 90/112 (80.36%), Postives = 96/112 (85.71%), Query Frame = 0


Query: 81  VPPDAVEPLFKQIVNQFVHDRSRTEAIVVGLNAVTHICERMPLLMTEGLLQDLALYKKSR 140
           VPPDAVEPLFKQIVNQFVHDRSRTEAI VGLN V  IC RMPLLMTE LLQDLALYKKS 
Sbjct: 389 VPPDAVEPLFKQIVNQFVHDRSRTEAIAVGLNVVREICLRMPLLMTEDLLQDLALYKKSH 448

Query: 141 DKALSGAAQSLIASFQSICPSFLGKKDRGRPTNPKARPNAYGEVSEVCDIPG 193
           +KA+S AA+SLI  F+ ICPS L KKDRGRPT+PKARP AYG+VS  CDIPG
Sbjct: 449 EKAVSIAARSLIGLFREICPSLLVKKDRGRPTDPKARPKAYGKVSVACDIPG 500

[Close]

BLAST of Lcy02g010940 vs. ExPASy TrEMBL
Match: A0A6J1JM56 (Protein SDA1 OS=Cucurbita maxima OX=3661 GN=LOC111488129 PE=3 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 5.1e-41
Identity = 89/112 (79.46%), Postives = 95/112 (84.82%), Query Frame = 0


Query: 81  VPPDAVEPLFKQIVNQFVHDRSRTEAIVVGLNAVTHICERMPLLMTEGLLQDLALYKKSR 140
           VPPDAVEPLFKQIVNQFVHDRSRTEAI VGLN V  IC RMPLLMTE LLQDLALYKKS 
Sbjct: 389 VPPDAVEPLFKQIVNQFVHDRSRTEAIAVGLNVVREICLRMPLLMTEDLLQDLALYKKSH 448

Query: 141 DKALSGAAQSLIASFQSICPSFLGKKDRGRPTNPKARPNAYGEVSEVCDIPG 193
           +KA+S AA+SLI  F+ ICPS L KKDRGRPT+PKA+P AYGEVS   DIPG
Sbjct: 449 EKAISVAARSLIGLFREICPSLLVKKDRGRPTDPKAKPKAYGEVSVASDIPG 500

[Close]

BLAST of Lcy02g010940 vs. ExPASy TrEMBL
Match: A0A6J1GQ82 (Protein SDA1 OS=Cucurbita moschata OX=3662 GN=LOC111456108 PE=3 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 5.1e-41
Identity = 89/112 (79.46%), Postives = 95/112 (84.82%), Query Frame = 0


Query: 81  VPPDAVEPLFKQIVNQFVHDRSRTEAIVVGLNAVTHICERMPLLMTEGLLQDLALYKKSR 140
           VPPDAVEPLFKQIVNQFVHDRSRTEAI VGLN V  IC RMPLLMTE LLQDLALYKKS 
Sbjct: 389 VPPDAVEPLFKQIVNQFVHDRSRTEAIAVGLNVVREICLRMPLLMTEDLLQDLALYKKSH 448

Query: 141 DKALSGAAQSLIASFQSICPSFLGKKDRGRPTNPKARPNAYGEVSEVCDIPG 193
           +KA+S AA+SLI  F+ ICPS L KKDRGRPT+PKA+P AYGEVS   DIPG
Sbjct: 449 EKAISVAARSLIGLFREICPSLLVKKDRGRPTDPKAKPKAYGEVSVASDIPG 500

[Close]

BLAST of Lcy02g010940 vs. ExPASy TrEMBL
Match: A0A5N6R1A9 (Protein SDA1 OS=Carpinus fangiana OX=176857 GN=FH972_009260 PE=3 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 6.7e-41
Identity = 88/112 (78.57%), Postives = 96/112 (85.71%), Query Frame = 0


Query: 81  VPPDAVEPLFKQIVNQFVHDRSRTEAIVVGLNAVTHICERMPLLMTEGLLQDLALYKKSR 140
           VPPDAVEPLFKQIVNQFVHDRSRTEAI VGLNA+  IC R+PLLMTE LLQDLALYKKS 
Sbjct: 404 VPPDAVEPLFKQIVNQFVHDRSRTEAIAVGLNAIREICLRIPLLMTEDLLQDLALYKKSH 463

Query: 141 DKALSGAAQSLIASFQSICPSFLGKKDRGRPTNPKARPNAYGEVSEVCDIPG 193
           +KA+S AA+SLI  F+ ICPS L KKDRGRPT+PKARP AYGEV  V D+PG
Sbjct: 464 EKAVSVAARSLITLFREICPSLLIKKDRGRPTDPKARPKAYGEVDVVSDVPG 515

[Close]

BLAST of Lcy02g010940 vs. ExPASy TrEMBL
Match: A0A1S3CDG0 (Protein SDA1 OS=Cucumis melo OX=3656 GN=LOC103499173 PE=3 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 3.3e-40
Identity = 87/112 (77.68%), Postives = 94/112 (83.93%), Query Frame = 0


Query: 81  VPPDAVEPLFKQIVNQFVHDRSRTEAIVVGLNAVTHICERMPLLMTEGLLQDLALYKKSR 140
           VPPDAVEPLFKQIVNQFVHDRSRTEAI VGLN V  IC RMPLLMTE LLQDLALYKKS 
Sbjct: 389 VPPDAVEPLFKQIVNQFVHDRSRTEAIAVGLNVVREICMRMPLLMTEDLLQDLALYKKSH 448

Query: 141 DKALSGAAQSLIASFQSICPSFLGKKDRGRPTNPKARPNAYGEVSEVCDIPG 193
           +KA+S AA+SLI  F+  CPS L KKDRGRPT+PKARP AYGEV+   +IPG
Sbjct: 449 EKAISIAARSLIGLFREYCPSLLAKKDRGRPTDPKARPKAYGEVAVASNIPG 500

[Close]

BLAST of Lcy02g010940 vs. NCBI nr
Match: XP_022149440.1 (protein SDA1 homolog [Momordica charantia])

HSP 1 Score: 180.3 bits (456), Expect = 1.6e-41
Identity = 90/112 (80.36%), Postives = 96/112 (85.71%), Query Frame = 0


Query: 81  VPPDAVEPLFKQIVNQFVHDRSRTEAIVVGLNAVTHICERMPLLMTEGLLQDLALYKKSR 140
           VPPDAVEPLFKQIVNQFVHDRSRTEAI VGLN V  IC RMPLLMTE LLQDLALYKKS 
Sbjct: 389 VPPDAVEPLFKQIVNQFVHDRSRTEAIAVGLNVVREICLRMPLLMTEDLLQDLALYKKSH 448

Query: 141 DKALSGAAQSLIASFQSICPSFLGKKDRGRPTNPKARPNAYGEVSEVCDIPG 193
           +KA+S AA+SLI  F+ ICPS L KKDRGRPT+PKARP AYG+VS  CDIPG
Sbjct: 449 EKAVSIAARSLIGLFREICPSLLVKKDRGRPTDPKARPKAYGKVSVACDIPG 500

[Close]

BLAST of Lcy02g010940 vs. NCBI nr
Match: XP_022991552.1 (protein SDA1 homolog [Cucurbita maxima])

HSP 1 Score: 177.6 bits (449), Expect = 1.1e-40
Identity = 89/112 (79.46%), Postives = 95/112 (84.82%), Query Frame = 0


Query: 81  VPPDAVEPLFKQIVNQFVHDRSRTEAIVVGLNAVTHICERMPLLMTEGLLQDLALYKKSR 140
           VPPDAVEPLFKQIVNQFVHDRSRTEAI VGLN V  IC RMPLLMTE LLQDLALYKKS 
Sbjct: 389 VPPDAVEPLFKQIVNQFVHDRSRTEAIAVGLNVVREICLRMPLLMTEDLLQDLALYKKSH 448

Query: 141 DKALSGAAQSLIASFQSICPSFLGKKDRGRPTNPKARPNAYGEVSEVCDIPG 193
           +KA+S AA+SLI  F+ ICPS L KKDRGRPT+PKA+P AYGEVS   DIPG
Sbjct: 449 EKAISVAARSLIGLFREICPSLLVKKDRGRPTDPKAKPKAYGEVSVASDIPG 500

[Close]

BLAST of Lcy02g010940 vs. NCBI nr
Match: XP_023548412.1 (protein SDA1 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 177.6 bits (449), Expect = 1.1e-40
Identity = 89/112 (79.46%), Postives = 95/112 (84.82%), Query Frame = 0


Query: 81  VPPDAVEPLFKQIVNQFVHDRSRTEAIVVGLNAVTHICERMPLLMTEGLLQDLALYKKSR 140
           VPPDAVEPLFKQIVNQFVHDRSRTEAI VGLN V  IC RMPLLMTE LLQDLALYKKS 
Sbjct: 389 VPPDAVEPLFKQIVNQFVHDRSRTEAIAVGLNVVREICLRMPLLMTEDLLQDLALYKKSH 448

Query: 141 DKALSGAAQSLIASFQSICPSFLGKKDRGRPTNPKARPNAYGEVSEVCDIPG 193
           +KA+S AA+SLI  F+ ICPS L KKDRGRPT+PKA+P AYGEVS   DIPG
Sbjct: 449 EKAISVAARSLIGLFREICPSLLVKKDRGRPTDPKAKPKAYGEVSVASDIPG 500

[Close]

BLAST of Lcy02g010940 vs. NCBI nr
Match: KAG6575976.1 (Protein SDA1-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 177.6 bits (449), Expect = 1.1e-40
Identity = 89/112 (79.46%), Postives = 95/112 (84.82%), Query Frame = 0


Query: 81  VPPDAVEPLFKQIVNQFVHDRSRTEAIVVGLNAVTHICERMPLLMTEGLLQDLALYKKSR 140
           VPPDAVEPLFKQIVNQFVHDRSRTEAI VGLN V  IC RMPLLMTE LLQDLALYKKS 
Sbjct: 389 VPPDAVEPLFKQIVNQFVHDRSRTEAIAVGLNVVREICLRMPLLMTEDLLQDLALYKKSH 448

Query: 141 DKALSGAAQSLIASFQSICPSFLGKKDRGRPTNPKARPNAYGEVSEVCDIPG 193
           +KA+S AA+SLI  F+ ICPS L KKDRGRPT+PKA+P AYGEVS   DIPG
Sbjct: 449 EKAISVAARSLIGLFREICPSLLVKKDRGRPTDPKAKPKAYGEVSVASDIPG 500

[Close]

BLAST of Lcy02g010940 vs. NCBI nr
Match: XP_022953635.1 (protein SDA1 homolog [Cucurbita moschata])

HSP 1 Score: 177.6 bits (449), Expect = 1.1e-40
Identity = 89/112 (79.46%), Postives = 95/112 (84.82%), Query Frame = 0


Query: 81  VPPDAVEPLFKQIVNQFVHDRSRTEAIVVGLNAVTHICERMPLLMTEGLLQDLALYKKSR 140
           VPPDAVEPLFKQIVNQFVHDRSRTEAI VGLN V  IC RMPLLMTE LLQDLALYKKS 
Sbjct: 389 VPPDAVEPLFKQIVNQFVHDRSRTEAIAVGLNVVREICLRMPLLMTEDLLQDLALYKKSH 448

Query: 141 DKALSGAAQSLIASFQSICPSFLGKKDRGRPTNPKARPNAYGEVSEVCDIPG 193
           +KA+S AA+SLI  F+ ICPS L KKDRGRPT+PKA+P AYGEVS   DIPG
Sbjct: 449 EKAISVAARSLIGLFREICPSLLVKKDRGRPTDPKAKPKAYGEVSVASDIPG 500

[Close]

BLAST of Lcy02g010940 vs. TAIR 10
Match: AT1G13160.1 (ARM repeat superfamily protein )

HSP 1 Score: 133.3 bits (334), Expect = 2.1e-31
Identity = 71/111 (63.96%), Postives = 81/111 (72.97%), Query Frame = 0


Query: 81  VPPDAVEPLFKQIVNQFVHDRSRTEAIVVGLNAVTHICERMPLLMTEGLLQDLALYKKSR 140
           VP D VEPLFKQIVNQFVHD+SR EAI VGLN V  +C R+  LMTE LLQDLALYKKS 
Sbjct: 405 VPSDVVEPLFKQIVNQFVHDKSRPEAIAVGLNVVREMCLRVHDLMTEELLQDLALYKKSH 464

Query: 141 DKALSGAAQSLIASFQSICPSFLGKKDRGRPTNPKARPNAYGEVSEVCDIP 192
           +KA+S AA+SLIA F+ I PS L KKDRGRP      P  YGE +   ++P
Sbjct: 465 EKAISAAARSLIALFREINPSLLVKKDRGRPGATVFIPKHYGESNVFSNVP 515

[Close]

BLAST of Lcy02g010940 vs. TAIR 10
Match: AT4G31520.1 (SDA1 family protein )

HSP 1 Score: 120.9 bits (302), Expect = 1.1e-27
Identity = 67/116 (57.76%), Postives = 79/116 (68.10%), Query Frame = 0


Query: 81  VPPDAVEPLFKQIVNQFVHDRSRTEAIVVGLNAVTHICERMPLLMTEGLLQDLALYK--- 140
           VP DAVEPLFKQIVN+F+HDRS  EAI V LN V  +  R+P LMTE LL DLA YK   
Sbjct: 321 VPSDAVEPLFKQIVNKFLHDRSSPEAIPVALNVVREMFLRIPELMTEDLLHDLAQYKTDK 380

Query: 141 --KSRDKALSGAAQSLIASFQSICPSFLGKKDRGRPTNPKARPNAYGEVSEVCDIP 192
             ++  KA+S A+ SLIA F+ I P  L KKDRGRP  P ARP  YGEV+   ++P
Sbjct: 381 KYRTHRKAISAASASLIALFREINPLLLVKKDRGRPGGPIARPKKYGEVNVFSNVP 436

The following BLAST results are available for this feature:

BLAST of Lcy02g010940 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A7S6A5	2.1e-23	50.88	Protein SDA1 homolog OS=Nematostella vectensis OX=45351 GN=sdad1 PE=3 SV=1	[more]
A4IIB1	1.3e-20	48.25	Protein SDA1 homolog OS=Xenopus tropicalis OX=8364 GN=sdad1 PE=2 SV=1	[more]
Q2VPG3	2.8e-20	48.25	Protein SDA1 homolog OS=Xenopus laevis OX=8355 GN=sdad1 PE=2 SV=1	[more]
Q7KKH3	2.4e-19	46.67	Protein SDA1 homolog OS=Drosophila melanogaster OX=7227 GN=Mys45A PE=1 SV=1	[more]
Q6NV26	3.1e-19	43.86	Protein SDA1 homolog OS=Danio rerio OX=7955 GN=sdad1 PE=2 SV=1	[more]

BLAST of Lcy02g010940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D5Q3	7.9e-42	80.36	Protein SDA1 OS=Momordica charantia OX=3673 GN=LOC111017865 PE=3 SV=1	[more]
A0A6J1JM56	5.1e-41	79.46	Protein SDA1 OS=Cucurbita maxima OX=3661 GN=LOC111488129 PE=3 SV=1	[more]
A0A6J1GQ82	5.1e-41	79.46	Protein SDA1 OS=Cucurbita moschata OX=3662 GN=LOC111456108 PE=3 SV=1	[more]
A0A5N6R1A9	6.7e-41	78.57	Protein SDA1 OS=Carpinus fangiana OX=176857 GN=FH972_009260 PE=3 SV=1	[more]
A0A1S3CDG0	3.3e-40	77.68	Protein SDA1 OS=Cucumis melo OX=3656 GN=LOC103499173 PE=3 SV=1	[more]

BLAST of Lcy02g010940 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022149440.1	1.6e-41	80.36	protein SDA1 homolog [Momordica charantia]	[more]
XP_022991552.1	1.1e-40	79.46	protein SDA1 homolog [Cucurbita maxima]	[more]
XP_023548412.1	1.1e-40	79.46	protein SDA1 homolog [Cucurbita pepo subsp. pepo]	[more]
KAG6575976.1	1.1e-40	79.46	Protein SDA1-like protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022953635.1	1.1e-40	79.46	protein SDA1 homolog [Cucurbita moschata]	[more]

BLAST of Lcy02g010940 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G13160.1	2.1e-31	63.96	ARM repeat superfamily protein	[more]
AT4G31520.1	1.1e-27	57.76	SDA1 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007949	SDA1 domain	PFAM	PF05285	SDA1	coord: 125..192 e-value: 2.4E-20 score: 73.3
IPR027312	Sda1	PANTHER	PTHR12730	HSDA/SDA1-RELATED	coord: 80..193
None	No IPR available	PANTHER	PTHR12730:SF0	PROTEIN SDA1 HOMOLOG	coord: 80..193

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy02g010940.1	Lcy02g010940.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030036	actin cytoskeleton organization
biological_process	GO:0015031	protein transport
biological_process	GO:0042273	ribosomal large subunit biogenesis
biological_process	GO:0000055	ribosomal large subunit export from nucleus
cellular_component	GO:0005730	nucleolus