Lcy02g010250 (gene) Sponge gourd (P93075) v1

Overview
NameLcy02g010250
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Descriptionchromosome transmission fidelity protein 8 homolog
LocationChr02: 27822343 .. 27829906 (-)
RNA-Seq ExpressionLcy02g010250
SyntenyLcy02g010250
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGATTAAGGTAAAATGTAACTGCGGCGAAACCAAATGCTTAGAATGGGCCGTTGTTGAGTTGCAAGGCGTAGTTGAAGCTCAACCCTCCTTCCAAGATCGCCTTCAAAACCTCGAAATCGGCATTCTATGTCGGTCCTCCGCTCAGGTGCTTTCTCTTGCTTTCTCATTTATCGATCATTTAACAGTAGTTTCAATTTCTTCTTTTGCATCTCATTCTTAGCCCCCGTTGTAGTCCTAGAATTGAATTCCTCGAGTATGGTATTGTTTAGCATAGTTAGGTTCATAAGAGGAATTAGTTACTAGATCAATCGTATTGAAATGGATTTCTCGCCTTAGTTTTATTGTATTGGTTGTCGGTGTAACCTAATTGATGATGAATTTGCAAAATCGGTGTCCAAGAGTGATTTCCGTTCCGTAAAGTCGTGTTTCTTCCCCTCATTGCTAGGGTGATTTGTAGCATTAAGGGTTCGTTTGGAATACCTTTTAGTTTAAATGTTTTTCAAAAATGCATTTTATTTTAAACATTTTGTATAAAAGTTGTTAAGAATTTAAACACTCTTATGTTTGGTTACATATCCCCATAAGTGTTTAGTTAGACCTCCTATAATTCGGGTATACAAGAGGAAGGGCAGGATGGGAAACAAGGCTAGCATACCGTTAGAGGAGGGAGCAGGGGGGACCACAAGGGATCGTGGGAGTGAGCACATTATGTACTGAGAGCAGGGGAATGTTTGGGGTGTGGATCATTTTGGCTTAGACTGAGTGAGGTCTAGGAAGGAGAATTCCAGCTTCTCGAATCGCTGGGGGTTACTTGTTCTTGTTGTTCTTGTTCTTCTTCTTTAATATCAATATATCGGCTAATAACCCCTCTATCTATTGAAGAACTCTCAATAGGATAGAGTTGGGTCATATTCTCCTCCATTTCTGTGTGTGTTTGGCTATTTTCTCTTATCTTAACAGGTTATATTGTTTGGATACCTAACGAATTGGTATCAGAGCACGTGACATCCTGGGGAGAACGAGGATTATGGCGCAAAAACAAGTTGAGGAGAGGTTAGAGGGCCAAGAAAGAGAGATGAGTGCGGTGAAAGAGTCGCTGCTTCTGTTTGGTAAACAACTCGAGCTGATAGCAGTAGAAATGAAAGAGAACCAGAGATCTAGACTAGCTTTAATGGCTGGACAGAGTGCGAGTAGGGGACAGTCATCATCAGATGTTACCGAGTCGTTGAACAAACAAGGGAAAGACAAAGAAAAAGAGTCGAATGAGTTGGTCGTCTTGACCGAATTGACAGAGGTCAACAGAGTGCAAAAGGAGCTACAAGGAGGAGATAGATGTAAGTTTAAGAAACTTGATATGCCCGTGTTCACAGGCGAGAACCCCGACTCTTGGTTGTTTCGAGCTGAGCGTTATTTTGACATACACCAGTTAACGGAAGCGGAGAAGATAACCGCTGCAATCATCAGCTTCGACCATGACGTTGTGGATTGGTATAGGTGGGAGTTGAGTCAAGAAAAAATACAGACATGGGAACAGTTAAAGGCCAGGGTATTCGAACGTTATCGTCCTTCTCAGAAAGGCAGTCTCTGTGCAAGGTTTTTGGCCGTGAAACAAGGAACCGTCGCCGATTTCAGGAAAAGGTTCGAGATATACGCCGCGCCGATGCCGGACTTGCCGCAGTAGGTACTCGAGAGTGCTTTCTTAAACGGGTTGGACCCGACAATACGAGCAGAGGTGGTCAGTCGTCGACCCGTTGGGTTACGTGAAATTATGAAAGAAGCCCAGTTGGTCGAAGATCGTGATTTGGTAATCAAATTGGCCATCGAATCGTTGGGCCTGGGAACACCGAAGGCAGCCCAATATGGGGGAACCAAAATATCAGGTACGAGTAACTCCAAATCTCGATATCAGGATTCCCTGCACGTTCGTACGGTTACTATTCCAAAAGGAGCTGTGCCTCGCAAGGACATCCCTACGCGCAGGTTAACAGATGCCGAATACAAGGAGAAGCGGGAAAGAGGACTTTGTTTCAAATGTGATGAGAAATTTTCAGCGAACCATAGATGTAAAACCAGGGATATCAGAGAGCTGCGAGTTTTATTAGTCAGTGGCGAGGAAGAGTTTGAAATCGAACCATTGACTCAGGAAGAAGAGGAAGCAGAGGAAGCTGAGCTTCACGTCTTCGAGGTCAGTGATATTGACACTGTGGCACTTGATCTTAAATCGGTTGTGGGATTCTCTACTCCAGACACCATGAAGGTTCGAGGATTGATTGAGGGAAAGGAAGTGGTGGTTCTAATAGACTGTGGAGCCACCCATAATTTTATTTCCCAACAGTTGGTCGACGAGTTCAACTTTCCTTTGGTAACCACAGCTAACTACGGAATCGTGATGGGAACTGGAGTGGCTATTCAAGGTAAGGGAGTTTGTAAGGATATCGTGGTATCTCTTCCCGAAGTATCAATCAAGGAAGATTTCCTCCCACTCGAACTAAGAGGAGTGGATATCATCTTGGGGATGCAGTGGCTTCGCACCATGGGTGGTATGACAGTGAACTGGACGGAATTGACCATGTCCTTTGAGGTTAATGGTACCAAGGTGACAATCCAAGGCGACCCTGCCCTTACCAAGGCCGAGATAACAATGAAAGCAATGATGAGGTCGTGGTCAGAGTCTGATGAAGGTTATTTGGTTGAACTAAGAGGGCTGACTGTTGACGAAATCTCTGAAGATTCGAATGAAGATGACTTGAAGGACCCCGAGTTACCAAGATCAATCCACTCGCTCCTTGAAGAATTCCAAGGTGTGTTCCATTTACCCAATAAGTTACCACCTAAAAGAGGCATAGATCACAGAATAGTGCTTCAGGAAGGCCACGGTCCCATTAATGTGAGACCCTATAAGTACGCTCATGCTCAGAAGAATGAGATTGAGAATATGGTAAGTGAAATGCTGTTATCCAGAATCATCAGACCCAGCTTCAGCCCTTTCTCAAGCTCTGTTTTGCTCGTCAAAAAAAAGGATGGGGGCTGGCGATTCTGTGTGGACTACCAGGCCTTAAACCAAGCCACCATTCCTGATAAGTTCCCCATACCCGTAATTGAAGAGTTGCTTGATGAGTTGAACGACTCGACAATCTACTCCAAGCTGGACTTGAAATCTGGTTACCACCAAATCAGAATGAAGGCTTTTCGCACCCACGAAGGCCACTACGAGTTCCTAGTCATGCCTTTTGGTTTGACAAACGCCCCGGCCACATTCCAATCCCTGACGAACTAGGTATTCCGATCGTTCCTAAGGAGGTTCATTCTAGTTTTTCTTGATGATATATTGGTGTATAGCCTAGATCTGGACACACATAGGAAGCACCTGGCCATTGTGTTTGAAACTCTAAAGAACAACTCCCTGTTTGCCAATAGCAAGAAATGTGTTTTCGCGAAGAACCGAATTGAGTACCTTGGCCACTGGGTGTCAGCTCAGGGTGTGGAGGCCGATCAAAAGAAAATCAGAGCAATGTTACAGTGGCCGGTTCCCACATCAGTCAAGGAGTTGCGGGGGTTCCTAGGTCTCACAGGGTATTATCGCCGCTTTGTGAAGAACTACGGTACCTTGGCAGCTCCCTTGACCAACTTACTCAAGAAAGACTCATTCTCATGGACAGAGCAAGCAACGCTGGCCTTTGAAGCTCTACGAGTAGCCATGGTGACATTGCCAGTCCTAGCTCTCCCAGACTTCTCCTTACCCTTCACCATCGAGACTGATGCATCTGGATATGGGTTGGGGGCAGTCCTATCTCAGAAGGGGCGTCCAATTGCTTTCTTCAGCCAAGCTTTGGGACAGAGGGCACAAGCAAGATCAGTATACGAGCGAGAATTGATGGCCATAGTCTTCTCGGTGCAAAAATGGCGCCACTACCTTCTTGGGCAGAGATTCACCGTGTTGACCGACCAACGAGCCTTGAAACACCTTTTGGAGCAGCGAGAAGTGCAGCCCGAATATCAAAAATGGCTCACCAAGCTTTTGGGCTATGATTTTGAGATCAAATATCATCCCGGACTCCTCAACAAAGCTGCTGATGCCTTATCGAGAATCATTCCAGAATGTGAGCTTCGAGCCATATCGGTCCCTTCTCTGATTAACATTGGAAAGATTAAGGCTGAGGTTGACCAAGACAGTGAGTTAGAGAACATTCTGCAAGATATTCGAGTAGACCCCTTGAAACACCCGAAGTTTACCTTAGTTCATGAGATGCTTCACTACAAAGGGAGACTTGTATTGTCTAGCAAATCTGAATTGATCCCTACACTCTTACAAGTCTTCCACGATTCAGTTCTAGGGGGGCATTCAGGCTTTCTTCGAACCTACAAGAGATTGACAGGAGAACTTTTTTGGAAAGGAATGAAAAATGATGTCAAAAAGTATGTAGAGAGATGTCAAGTCTGCCAAGCGAACAAAACAGAGGCAGTGGCACCAGCAGGCCTCCTCCAGCCCTTACCTCATCCGGACCGAATATGGGAAGATTTATCCATGGACTTCATTGAGGGTCTCCCTATCTCACACGGAATGGACACCATCATGGTCGTGGTCGATCGGTTAAGTAAGTATGCCCATTTTATCTTACTTAAGCATCCTTTTTCAGCTATGGTAGTGGCTGCTATGTTTGTCAAAGAGGTGGTGCGACTCCATGGCTTCCCTCGTTCGATTGTGTTGGACCGTGATAGGATTTTTGTTAGCCATTTTTGGAATGAAATGTTCAGAATCCAAGGAACGGAATTGAAAAGAAGCACGACCTTCCATCCTCAGACCGATGGTCAAACCGAGAGGGTCAACCGCTGCCTAGAGATGTACCTCCGGTGTTTTTGCAATGAACAACCTAAGAAGTGGTCGTTGTGGATGTCGTGGGCGGAATTTTGGTACAACACGACCTATCACACATCCATCAACACCATTCCATTCCATGTGGTTTACGGCCGAGCCCCCCTCCAGTGATCTCATATGGGGATAACAAGACCACCAATGATTCAGTGGAATAGCAGCTCCTCGAGAGAGACAGACAGCTTTTGAGGTTGAAGGAACAACTGTCGCTTGCCCAAGATCGAATGAACAAGCAAGCTGATAAGAAGCACAGGGATGTGGAACTACAGGTGGGGGATTTGGCCTACTTGAAGATCAGACCATACCGACAGAAATCGATCGCTCGCAAGAGATGTGAAAAATTATCCCCCAGATACTCTGGCCCTTATAAGGTTTTGAAACGAATTGGCATGGTAGCCTATCAGCTGGAACTACCGTCTTCAGCAGCTATTCATGATGTCTTCCACATTTCGCAGCTCAAGAAGGCTGTTGGTCACCCGTTAGTTGTTCATGATGTCATCCCCCCGTTATCTGAAGAATTTGAGTGGCTGATCGAACCAATCGCCAGGTTAGGGGTCCGCTGGAATGAGGATACTGACAGTGAAGAATGGCTAATACAGTGGAAAGACCAAGAGATCTTTAATGCTACATGGGAGAAAGCCTCAGATATCAAGCTGCAGTACCCGAATTTCCACCTTGAGGACAAGGTGAATCTTGAACAAGGGGGTATTGTTAGACCTCCTATAATTCGGGTATACAAGAGGAAGGGCAGAATGGGAAACAAGGCTAGCATACCGTTAGAGGAGGGAGCAGGGGGGACCACAAGGGATCGTGGGAGTGAGCACCTTATGTACTGAGAGCAGGGGAATGTTTGGGGTGTGGATCATTTTGGCTTAGACTGAGTGAGGTCTAGGAAGGAGAATTCCAGCTTCTCGAATCGCTGGGGTTACTTGTTCTTGTTGTTCTTGTTCTTCTTTAATATCAATATATCGGCTAATAACCCCTCTATCTATTGAAGAACTCTCAATAGGATAGAGTTGGGTCATATTCTCCTCCATTTCGGTGTGTGTTTGGCTATTTTCTCTTATCTTAACAGGTTATATTGTTTGGATACCTAACATGTTTTTATACACAAGTTATTATATACTTAAAATTTCTTTTTAAAAAATTTGCTTTCAAGTGTTTCCCTCAAAACGGTTTATTTCTCAATCTCATTTTTTAATAAGTAATTTTTAGTGTCAAAGCGAGCATAGCTCAACGGTAATTGACATGTACCATCGACCAAGAGGTCAGAGGTTCGAATCCCCCCACCCCAAATGTTATTGTACTAAAAAAAAAATGAGATTGTAGGAAGTATATACTTTTACACCCCAAATGTTCATGGCACTTTGTTTTTTGGTTTGTAGGAAGTTTATACTTTTACAGTAGGGTATCATGAACTGACAGGAAACAAAGTGCCATTGAAGAAGCCGCTGTTGGTGTTGAAGAAAAAGAGGTGCGTGGATGAGGATCAGAGTGGAGATACCAATTCCGCTACTGCAGAGTTGGAAGTCATTGGGATAATCAGGCAGCGGATTTTGTTTAAGAGCAGACCAAAGGCCCTCATATCCAGTAAGTCCGTAAAATTTGGCTATCATTTGAAAATGTTACTTCAAAAGTAAGCTTATACAATACAGAATTTATTGGATAAAAAAATTCAGTTTAGAAAATCGATAATATTAAACCAAATGGTAAAATATCTATTCTGTACCATATAAATCTGGCAAACCAATGGAAGTCTCGTTGTGTTTTATTTCTAGTTGAGAACATAGATAACAGGGAACAATCTGAAAGTCCATAGATTTAGATTTAGACTCGTGTTTGGGGCCCCGAAACCCAAGTAAAATCACTTGCCAAAGGTTTCTCGCCAGTTTTTCCTGCTAAAGGACCCTACAAATAGAAAGATAAAGAGGGAGGGAGTTTTAGGCATTAAAACCTTGATTGTTAAGCTTGGATTTTTGGTAATGCTTCAGTAGCCTCATGGTTTATCTCTTTTACAAATGTTCTTGTTGTTTCACTTTCTAAACTCATTGAATTGAGTACATGCAGTTAAAATAACCTGGCCATCTTGATAATCTCGGAGCTGACCTTGAATGTATAAAGTCTTCTGGGGATTAGTGAGGTATAGGAACCCGATAATAAGAAAATATGGCGGAAATTATATTCATGATTTAAAGAGAAATTATGCTGAGTAATAACTTTTCGAGAGGGCTCTCTCTCCATAGTTTCTCAACGAACCAATTCCCAACATTACGCCTTCTCTAATGCCTCTAACTCACTTTTATTTATGACCATCCGCTCTAGCAAACTCCCATGTATTTATAACATTTCGCTACTAATATACTCTAAACATGCATAATGCAAGGAATATGGTACACGTACATCTTAGTTAAAAAAAGAAAAGAAAAGCTGGCCATTGGTAACTTGATATACCACCTTACTTGAATAGGATATGTTCTATAATTATACGATTGTGTCGTTGAGTTGTAAGGTTAACTTGATATGTATGCTTTAGTTTTTGTGATAGAGATGTTTCTTTCGCTTCTTTTCTCTTCTTTGGTGCAATGCATAATCCATATTACAATACTTTTTCCTATCAGAACCACAGCCATTGGTGAAGGAGAGATCCCGCGCTTCAGGATCTGCAGTGACAGGCCAATCGACATGA

mRNA sequence

ATGCAGATTAAGGTAAAATGTAACTGCGGCGAAACCAAATGCTTAGAATGGGCCGTTGTTGAGTTGCAAGGCGTAGTTGAAGCTCAACCCTCCTTCCAAGATCGCCTTCAAAACCTCGAAATCGGCATTCTATGTCGGTCCTCCGCTCAGGAAGTTTATACTTTTACAGTAGGGTATCATGAACTGACAGGAAACAAAGTGCCATTGAAGAAGCCGCTGTTGGTGTTGAAGAAAAAGAGGTGCGTGGATGAGGATCAGAGTGGAGATACCAATTCCGCTACTGCAGAGTTGGAAGTCATTGGGATAATCAGGCAGCGGATTTTGTTTAAGAGCAGACCAAAGGCCCTCATATCCAAACCACAGCCATTGGTGAAGGAGAGATCCCGCGCTTCAGGATCTGCAGTGACAGGCCAATCGACATGA

Coding sequence (CDS)

ATGCAGATTAAGGTAAAATGTAACTGCGGCGAAACCAAATGCTTAGAATGGGCCGTTGTTGAGTTGCAAGGCGTAGTTGAAGCTCAACCCTCCTTCCAAGATCGCCTTCAAAACCTCGAAATCGGCATTCTATGTCGGTCCTCCGCTCAGGAAGTTTATACTTTTACAGTAGGGTATCATGAACTGACAGGAAACAAAGTGCCATTGAAGAAGCCGCTGTTGGTGTTGAAGAAAAAGAGGTGCGTGGATGAGGATCAGAGTGGAGATACCAATTCCGCTACTGCAGAGTTGGAAGTCATTGGGATAATCAGGCAGCGGATTTTGTTTAAGAGCAGACCAAAGGCCCTCATATCCAAACCACAGCCATTGGTGAAGGAGAGATCCCGCGCTTCAGGATCTGCAGTGACAGGCCAATCGACATGA

Protein sequence

MQIKVKCNCGETKCLEWAVVELQGVVEAQPSFQDRLQNLEIGILCRSSAQEVYTFTVGYHELTGNKVPLKKPLLVLKKKRCVDEDQSGDTNSATAELEVIGIIRQRILFKSRPKALISKPQPLVKERSRASGSAVTGQST
Homology
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BLAST of Lcy02g010250 vs. ExPASy Swiss-Prot
Match: Q54JL4 (Putative uncharacterized protein DDB_G0287975 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0287975 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 8.1e-09
Identity = 41/132 (31.06%), Postives = 65/132 (49.24%), Query Frame = 0 

Query: 1   MQIKVKCNCGETKCLEWAVVELQGVVEAQPSFQDRLQNLEIGILCRS-SAQEVYTFTVGY 60
           MQI +K     T   EW +++LQG +E    +   L+N  +GIL +  + ++ ++F +G 
Sbjct: 1   MQIFIK---ESTNKKEWFILDLQGHLE----YTGDLKNETLGILTKKPNTKDDFSFQIGN 60

Query: 61  HELTGNKVPLKKPLLVLKKKRCVDEDQSGDTNSAT--------------AELEVIGIIRQ 118
             L G +VPLKKPLLV+KK +  + + S + N                  E  + GI   
Sbjct: 61  SVLVGKRVPLKKPLLVIKKSKLNNNNNSNNNNKMAVDNKDNKDNEKDKEVEYSIEGICND 120

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BLAST of Lcy02g010250 vs. ExPASy Swiss-Prot
Match: P0CG13 (Chromosome transmission fidelity protein 8 homolog OS=Homo sapiens OX=9606 GN=CHTF8 PE=1 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 1.7e-06
Identity = 34/103 (33.01%), Postives = 53/103 (51.46%), Query Frame = 0 

Query: 16  EWAVVELQGVVEAQPSFQDRLQNLEIGILCRSSAQEVYTFTVGYHELTGNKVPLKKPLLV 75
           EW ++ELQG +EA+  +   L    +G L   + + +    VG+H L G  + L+KP  V
Sbjct: 16  EWVLMELQGEIEAR--YSTGLAGNLLGDL-HYTTEGIPVLIVGHHILYGKIIHLEKPFAV 75

Query: 76  LKKKRCVDEDQSGDTNSATAELEVIGIIRQRILFKSRPKALIS 119
           L K    D+D             V  +I+ +ILFK+RPK +I+
Sbjct: 76  LVKHTPGDQDCDELGRETGTRYLVTALIKDKILFKTRPKPIIT 115

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BLAST of Lcy02g010250 vs. ExPASy Swiss-Prot
Match: P0CG15 (Chromosome transmission fidelity protein 8 homolog OS=Mus musculus OX=10090 GN=Chtf8 PE=3 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 1.7e-06
Identity = 33/103 (32.04%), Postives = 53/103 (51.46%), Query Frame = 0 

Query: 16  EWAVVELQGVVEAQPSFQDRLQNLEIGILCRSSAQEVYTFTVGYHELTGNKVPLKKPLLV 75
           EW ++ELQG +EA+  +   L    +G L   + + +    VG+H L G  + L+KP  V
Sbjct: 16  EWVLMELQGEIEAR--YSTGLAGNLLGDL-HYTTEGIPVLIVGHHILYGKTIHLEKPFAV 75

Query: 76  LKKKRCVDEDQSGDTNSATAELEVIGIIRQRILFKSRPKALIS 119
           L K     +D          +  V  +I+ +ILFK+RPK +I+
Sbjct: 76  LVKHTPGKQDCDEPGRGTGTQYLVTALIKNKILFKTRPKPIIT 115

[Close]
BLAST of Lcy02g010250 vs. ExPASy Swiss-Prot
Match: Q65ZA6 (Chromosome transmission fidelity protein 8 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ctf8 PE=1 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 5.4e-05
Identity = 34/93 (36.56%), Postives = 50/93 (53.76%), Query Frame = 0 

Query: 25  VVEAQPSFQDRLQNLEIG----ILCRSSAQEVYTFTVGYHELTGNKVPLKKPLLVLKKKR 84
           +VE Q + + +  +L IG    I  ++S ++  T TVG   + G    LKKPL VL+K  
Sbjct: 16  LVEVQATLERKADSLHIGDLKIIKEKNSEKKKATLTVGNQYMEGVVESLKKPLAVLQK-- 75

Query: 85  CVDEDQSGDTNSATAELEVIGIIRQRILFKSRP 114
             + D     +S + EL+   IIR+RI F SRP
Sbjct: 76  -TNADPVDVYSSPSHELKCCSIIRERIRFSSRP 105

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BLAST of Lcy02g010250 vs. ExPASy TrEMBL
Match: A0A6J1I4S6 (Uncharacterized protein OS=Cucurbita maxima OX=3661 GN=LOC111469152 PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 7.5e-66
Identity = 127/140 (90.71%), Postives = 134/140 (95.71%), Query Frame = 0 

Query: 1   MQIKVKCNCGETKCLEWAVVELQGVVEAQPSFQDRLQNLEIGILCRSSAQEVYTFTVGYH 60
           MQIKVKCNCGETKCLEWAVVELQG+VEAQPSF+DR Q LEIG+LCR SAQEVYTFTVGYH
Sbjct: 1   MQIKVKCNCGETKCLEWAVVELQGIVEAQPSFEDRFQTLEIGVLCRPSAQEVYTFTVGYH 60

Query: 61  ELTGNKVPLKKPLLVLKKKRCVDEDQSGDTNSATAELEVIGIIRQRILFKSRPKALISKP 120
           ELTG+KVPLKKPLLVLKKK+CVDEDQSGDT SATAELEVIGIIRQR LFK+RPKALISKP
Sbjct: 61  ELTGSKVPLKKPLLVLKKKKCVDEDQSGDTKSATAELEVIGIIRQRFLFKTRPKALISKP 120

Query: 121 QPLVKERSRASGSAVTGQST 141
           QP VKERSRASGSAVTGQ+T
Sbjct: 121 QPSVKERSRASGSAVTGQTT 140

[Close]
BLAST of Lcy02g010250 vs. ExPASy TrEMBL
Match: A0A6J1EMV0 (Uncharacterized protein OS=Cucurbita moschata OX=3662 GN=LOC111435796 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 1.1e-64
Identity = 128/142 (90.14%), Postives = 135/142 (95.07%), Query Frame = 0 

Query: 1   MQIKVKCNCGETKCLEWAVVELQGVVEAQPSFQDRLQNLEIGILCRSSAQEVYTFTVGYH 60
           MQIKVKCNCGETKCLEWAVVELQG+VEAQPSF+DRLQ LEIG+LCR SAQEVYTFTVGYH
Sbjct: 1   MQIKVKCNCGETKCLEWAVVELQGIVEAQPSFEDRLQTLEIGVLCRPSAQEVYTFTVGYH 60

Query: 61  ELTGNKVPLKKPLLVLKKKRCVDEDQSGDTNSATAELEVIGIIRQRILFKSRPKALISKP 120
           EL G+KVPLKKPLLVLKKK+CVDEDQSGDT SATAELEVIGIIRQRILFK+RPKALISKP
Sbjct: 61  ELAGSKVPLKKPLLVLKKKKCVDEDQSGDTKSATAELEVIGIIRQRILFKTRPKALISKP 120

Query: 121 QPLVKERSRA--SGSAVTGQST 141
           QP VKERSRA  SGSAVTGQ+T
Sbjct: 121 QPSVKERSRASGSGSAVTGQAT 142

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BLAST of Lcy02g010250 vs. ExPASy TrEMBL
Match: A0A0A0KPT4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G172910 PE=4 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 6.5e-62
Identity = 123/140 (87.86%), Postives = 130/140 (92.86%), Query Frame = 0 

Query: 1   MQIKVKCNCGETKCLEWAVVELQGVVEAQPSFQDRLQNLEIGILCRSSAQEVYTFTVGYH 60
           M+IK+KCNCGETKCLEWAVVELQGVVE Q +FQDRLQNLEIGILCR SAQEVYTFTVGYH
Sbjct: 1   MEIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLEIGILCRPSAQEVYTFTVGYH 60

Query: 61  ELTGNKVPLKKPLLVLKKKRCVDEDQSGDTNSATAELEVIGIIRQRILFKSRPKALISKP 120
           ELTG+K+ LKKPLLVLKK R VDEDQS DT S  AELEVIGIIRQRILFK+RPKALISKP
Sbjct: 61  ELTGSKISLKKPLLVLKKTRSVDEDQSSDTKSGNAELEVIGIIRQRILFKTRPKALISKP 120

Query: 121 QPLVKERSRASGSAVTGQST 141
           QPLVKERSRASGSAVTGQ+T
Sbjct: 121 QPLVKERSRASGSAVTGQTT 140

[Close]
BLAST of Lcy02g010250 vs. ExPASy TrEMBL
Match: A0A5D3BQB7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1728G00430 PE=4 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 6.1e-60
Identity = 120/140 (85.71%), Postives = 128/140 (91.43%), Query Frame = 0 

Query: 1   MQIKVKCNCGETKCLEWAVVELQGVVEAQPSFQDRLQNLEIGILCRSSAQEVYTFTVGYH 60
           MQIK+KCNCGETKCLEWAVVELQGVVE Q +FQDR+QNLEIGILCR SAQE+YTFTVGYH
Sbjct: 1   MQIKLKCNCGETKCLEWAVVELQGVVEHQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYH 60

Query: 61  ELTGNKVPLKKPLLVLKKKRCVDEDQSGDTNSATAELEVIGIIRQRILFKSRPKALISKP 120
           ELTG+KV LKKPLLVLKK R VDEDQS D  S  AELEVIGIIRQRILFK+RPKALISKP
Sbjct: 61  ELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVIGIIRQRILFKTRPKALISKP 120

Query: 121 QPLVKERSRASGSAVTGQST 141
           +PLVKERSRASGSAV GQ+T
Sbjct: 121 EPLVKERSRASGSAVKGQTT 140

[Close]
BLAST of Lcy02g010250 vs. ExPASy TrEMBL
Match: A0A1S3CT18 (Uncharacterized protein OS=Cucumis melo OX=3656 GN=LOC103504632 PE=4 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 6.1e-60
Identity = 120/140 (85.71%), Postives = 128/140 (91.43%), Query Frame = 0 

Query: 1   MQIKVKCNCGETKCLEWAVVELQGVVEAQPSFQDRLQNLEIGILCRSSAQEVYTFTVGYH 60
           MQIK+KCNCGETKCLEWAVVELQGVVE Q +FQDR+QNLEIGILCR SAQE+YTFTVGYH
Sbjct: 1   MQIKLKCNCGETKCLEWAVVELQGVVEHQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYH 60

Query: 61  ELTGNKVPLKKPLLVLKKKRCVDEDQSGDTNSATAELEVIGIIRQRILFKSRPKALISKP 120
           ELTG+KV LKKPLLVLKK R VDEDQS D  S  AELEVIGIIRQRILFK+RPKALISKP
Sbjct: 61  ELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVIGIIRQRILFKTRPKALISKP 120

Query: 121 QPLVKERSRASGSAVTGQST 141
           +PLVKERSRASGSAV GQ+T
Sbjct: 121 EPLVKERSRASGSAVKGQTT 140

[Close]
BLAST of Lcy02g010250 vs. NCBI nr
Match: XP_023551664.1 (putative uncharacterized protein DDB_G0287975 [Cucurbita pepo subsp. pepo] >KAG7017126.1 hypothetical protein SDJN02_22238 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 262.7 bits (670), Expect = 1.8e-66
Identity = 129/140 (92.14%), Postives = 136/140 (97.14%), Query Frame = 0 

Query: 1   MQIKVKCNCGETKCLEWAVVELQGVVEAQPSFQDRLQNLEIGILCRSSAQEVYTFTVGYH 60
           MQIKVKCNCGETKCLEWAVVELQG+VEAQPSF+DRLQ LEIG+LCR SAQEVYTFTVGYH
Sbjct: 1   MQIKVKCNCGETKCLEWAVVELQGIVEAQPSFEDRLQTLEIGVLCRPSAQEVYTFTVGYH 60

Query: 61  ELTGNKVPLKKPLLVLKKKRCVDEDQSGDTNSATAELEVIGIIRQRILFKSRPKALISKP 120
           ELTG+KVPLKKPLLVLKKK+CVDEDQSGDT SATAELEVIGIIRQRILFK+RPKALISKP
Sbjct: 61  ELTGSKVPLKKPLLVLKKKKCVDEDQSGDTKSATAELEVIGIIRQRILFKTRPKALISKP 120

Query: 121 QPLVKERSRASGSAVTGQST 141
           QP VKERSRASGSAVTGQ+T
Sbjct: 121 QPSVKERSRASGSAVTGQAT 140

[Close]
BLAST of Lcy02g010250 vs. NCBI nr
Match: XP_022970179.1 (putative uncharacterized protein DDB_G0287975 [Cucurbita maxima])

HSP 1 Score: 259.6 bits (662), Expect = 1.5e-65
Identity = 127/140 (90.71%), Postives = 134/140 (95.71%), Query Frame = 0 

Query: 1   MQIKVKCNCGETKCLEWAVVELQGVVEAQPSFQDRLQNLEIGILCRSSAQEVYTFTVGYH 60
           MQIKVKCNCGETKCLEWAVVELQG+VEAQPSF+DR Q LEIG+LCR SAQEVYTFTVGYH
Sbjct: 1   MQIKVKCNCGETKCLEWAVVELQGIVEAQPSFEDRFQTLEIGVLCRPSAQEVYTFTVGYH 60

Query: 61  ELTGNKVPLKKPLLVLKKKRCVDEDQSGDTNSATAELEVIGIIRQRILFKSRPKALISKP 120
           ELTG+KVPLKKPLLVLKKK+CVDEDQSGDT SATAELEVIGIIRQR LFK+RPKALISKP
Sbjct: 61  ELTGSKVPLKKPLLVLKKKKCVDEDQSGDTKSATAELEVIGIIRQRFLFKTRPKALISKP 120

Query: 121 QPLVKERSRASGSAVTGQST 141
           QP VKERSRASGSAVTGQ+T
Sbjct: 121 QPSVKERSRASGSAVTGQTT 140

[Close]
BLAST of Lcy02g010250 vs. NCBI nr
Match: KAG6579684.1 (hypothetical protein SDJN03_24132, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 257.7 bits (657), Expect = 5.8e-65
Identity = 129/142 (90.85%), Postives = 136/142 (95.77%), Query Frame = 0 

Query: 1   MQIKVKCNCGETKCLEWAVVELQGVVEAQPSFQDRLQNLEIGILCRSSAQEVYTFTVGYH 60
           MQIKVKCNCGETKCLEWAVVELQG+VEAQPSF+DRLQ LEIG+LCR SAQEVYTFTVGYH
Sbjct: 1   MQIKVKCNCGETKCLEWAVVELQGIVEAQPSFEDRLQTLEIGVLCRPSAQEVYTFTVGYH 60

Query: 61  ELTGNKVPLKKPLLVLKKKRCVDEDQSGDTNSATAELEVIGIIRQRILFKSRPKALISKP 120
           ELTG+KVPLKKPLLVLKKK+CVDEDQSGDT SATAELEVIGIIRQRILFK+RPKALISKP
Sbjct: 61  ELTGSKVPLKKPLLVLKKKKCVDEDQSGDTKSATAELEVIGIIRQRILFKTRPKALISKP 120

Query: 121 QPLVKERSRA--SGSAVTGQST 141
           QP VKERSRA  SGSAVTGQ+T
Sbjct: 121 QPSVKERSRASGSGSAVTGQAT 142

[Close]
BLAST of Lcy02g010250 vs. NCBI nr
Match: XP_022929119.1 (putative uncharacterized protein DDB_G0287975 [Cucurbita moschata])

HSP 1 Score: 255.8 bits (652), Expect = 2.2e-64
Identity = 128/142 (90.14%), Postives = 135/142 (95.07%), Query Frame = 0 

Query: 1   MQIKVKCNCGETKCLEWAVVELQGVVEAQPSFQDRLQNLEIGILCRSSAQEVYTFTVGYH 60
           MQIKVKCNCGETKCLEWAVVELQG+VEAQPSF+DRLQ LEIG+LCR SAQEVYTFTVGYH
Sbjct: 1   MQIKVKCNCGETKCLEWAVVELQGIVEAQPSFEDRLQTLEIGVLCRPSAQEVYTFTVGYH 60

Query: 61  ELTGNKVPLKKPLLVLKKKRCVDEDQSGDTNSATAELEVIGIIRQRILFKSRPKALISKP 120
           EL G+KVPLKKPLLVLKKK+CVDEDQSGDT SATAELEVIGIIRQRILFK+RPKALISKP
Sbjct: 61  ELAGSKVPLKKPLLVLKKKKCVDEDQSGDTKSATAELEVIGIIRQRILFKTRPKALISKP 120

Query: 121 QPLVKERSRA--SGSAVTGQST 141
           QP VKERSRA  SGSAVTGQ+T
Sbjct: 121 QPSVKERSRASGSGSAVTGQAT 142

[Close]
BLAST of Lcy02g010250 vs. NCBI nr
Match: XP_038906846.1 (putative uncharacterized protein DDB_G0287975 [Benincasa hispida] >XP_038906847.1 putative uncharacterized protein DDB_G0287975 [Benincasa hispida] >XP_038906848.1 putative uncharacterized protein DDB_G0287975 [Benincasa hispida] >XP_038906849.1 putative uncharacterized protein DDB_G0287975 [Benincasa hispida] >XP_038906850.1 putative uncharacterized protein DDB_G0287975 [Benincasa hispida])

HSP 1 Score: 250.8 bits (639), Expect = 7.1e-63
Identity = 126/140 (90.00%), Postives = 131/140 (93.57%), Query Frame = 0 

Query: 1   MQIKVKCNCGETKCLEWAVVELQGVVEAQPSFQDRLQNLEIGILCRSSAQEVYTFTVGYH 60
           MQIK+KCNCGETKCLEWAVVELQGVVE Q +FQDRLQNLEIGILCR SAQEVYTFTVGYH
Sbjct: 1   MQIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLEIGILCRPSAQEVYTFTVGYH 60

Query: 61  ELTGNKVPLKKPLLVLKKKRCVDEDQSGDTNSATAELEVIGIIRQRILFKSRPKALISKP 120
           ELTG+KVPLKKPLLVLKK R VDEDQS D  SA AELEVIGIIRQRILFK+RPKALISKP
Sbjct: 61  ELTGSKVPLKKPLLVLKKMRSVDEDQSSDAKSANAELEVIGIIRQRILFKTRPKALISKP 120

Query: 121 QPLVKERSRASGSAVTGQST 141
           QPLVKERSRASGSAVTGQ+T
Sbjct: 121 QPLVKERSRASGSAVTGQTT 140

[Close]
BLAST of Lcy02g010250 vs. TAIR 10
Match: AT5G52220.1 (CONTAINS InterPro DOMAIN/s: Chromosome transmission fidelity protein 8 (InterPro:IPR018607); Has 127 Blast hits to 127 proteins in 63 species: Archae - 0; Bacteria - 0; Metazoa - 70; Fungi - 17; Plants - 31; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). )

HSP 1 Score: 149.4 bits (376), Expect = 2.1e-36
Identity = 77/119 (64.71%), Postives = 89/119 (74.79%), Query Frame = 0 

Query: 1   MQIKVKCNCGETKCLEWAVVELQGVVEAQPSFQDRLQNLEIGILCRS-SAQEVYTFTVGY 60
           M+I+VKC CGE +C EWA+VELQGVVE Q SFQ  +QNLEIG LC S S+Q  YTFTVGY
Sbjct: 1   MEIRVKCRCGEEECSEWAIVELQGVVETQASFQGSIQNLEIGRLCHSDSSQGTYTFTVGY 60

Query: 61  HELTGNKVPLKKPLLVLKKKRCVDEDQSGDTNSATAELEVIGIIRQRILFKSRPKALIS 119
           HEL G+KV LKKPLLVLKK       Q  + +    ELEV+GIIR +ILFK+RPK LIS
Sbjct: 61  HELVGSKVTLKKPLLVLKKL------QFDEVSGKATELEVVGIIRTKILFKTRPKPLIS 113

[Close]
BLAST of Lcy02g010250 vs. TAIR 10
Match: AT5G52220.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chromosome transmission fidelity protein 8 (InterPro:IPR018607). )

HSP 1 Score: 149.4 bits (376), Expect = 2.1e-36
Identity = 77/119 (64.71%), Postives = 89/119 (74.79%), Query Frame = 0 

Query: 1   MQIKVKCNCGETKCLEWAVVELQGVVEAQPSFQDRLQNLEIGILCRS-SAQEVYTFTVGY 60
           M+I+VKC CGE +C EWA+VELQGVVE Q SFQ  +QNLEIG LC S S+Q  YTFTVGY
Sbjct: 1   MEIRVKCRCGEEECSEWAIVELQGVVETQASFQGSIQNLEIGRLCHSDSSQGTYTFTVGY 60

Query: 61  HELTGNKVPLKKPLLVLKKKRCVDEDQSGDTNSATAELEVIGIIRQRILFKSRPKALIS 119
           HEL G+KV LKKPLLVLKK       Q  + +    ELEV+GIIR +ILFK+RPK LIS
Sbjct: 61  HELVGSKVTLKKPLLVLKKL------QFDEVSGKATELEVVGIIRTKILFKTRPKPLIS 113

The following BLAST results are available for this feature:
BLAST of Lcy02g010250 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q54JL48.1e-0931.06Putative uncharacterized protein DDB_G0287975 OS=Dictyostelium discoideum OX=446... [more]
P0CG131.7e-0633.01Chromosome transmission fidelity protein 8 homolog OS=Homo sapiens OX=9606 GN=CH... [more]
P0CG151.7e-0632.04Chromosome transmission fidelity protein 8 homolog OS=Mus musculus OX=10090 GN=C... [more]
Q65ZA65.4e-0536.56Chromosome transmission fidelity protein 8 OS=Schizosaccharomyces pombe (strain ... [more]
BLAST of Lcy02g010250 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1I4S67.5e-6690.71Uncharacterized protein OS=Cucurbita maxima OX=3661 GN=LOC111469152 PE=4 SV=1[more]
A0A6J1EMV01.1e-6490.14Uncharacterized protein OS=Cucurbita moschata OX=3662 GN=LOC111435796 PE=4 SV=1[more]
A0A0A0KPT46.5e-6287.86Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G172910 PE=4 SV=1[more]
A0A5D3BQB76.1e-6085.71Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3CT186.1e-6085.71Uncharacterized protein OS=Cucumis melo OX=3656 GN=LOC103504632 PE=4 SV=1[more]
BLAST of Lcy02g010250 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023551664.11.8e-6692.14putative uncharacterized protein DDB_G0287975 [Cucurbita pepo subsp. pepo] >KAG7... [more]
XP_022970179.11.5e-6590.71putative uncharacterized protein DDB_G0287975 [Cucurbita maxima][more]
KAG6579684.15.8e-6590.85hypothetical protein SDJN03_24132, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022929119.12.2e-6490.14putative uncharacterized protein DDB_G0287975 [Cucurbita moschata][more]
XP_038906846.17.1e-6390.00putative uncharacterized protein DDB_G0287975 [Benincasa hispida] >XP_038906847.... [more]
BLAST of Lcy02g010250 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G52220.12.1e-3664.71CONTAINS InterPro DOMAIN/s: Chromosome transmission fidelity protein 8 (InterPro... [more]
AT5G52220.22.1e-3664.71FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018607Chromosome transmission fidelity protein 8PFAMPF09696Ctf8coord: 49..114
e-value: 3.7E-10
score: 40.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 120..140
NoneNo IPR availablePANTHERPTHR47475CHROMOSOME TRANSMISSION FIDELITY PROTEIN 8coord: 1..132

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy02g010250.1Lcy02g010250.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007064 mitotic sister chromatid cohesion
cellular_component GO:0031390 Ctf18 RFC-like complex