Lcy02g009650 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCGCAAAATTCATTAGAAAAGCATTGTGCTGATGAGGTCAATGAAACTGATGAGTTGAAAAGTGAGGGACCATGGCCTGACAAGAATGAGACTCTATTTGTTGACTTAATGGATGAAGAGGTTGCAAAGGGCAATCGACCAACTACAACATTTACAAGGACTAGTTGGAATTATATGAGAAACCAACTAAACACTAGTACCGGCTATGCTTATACTCATGATCAATTGAAAAATAAGTTCAACAAATTAAGGCAAAATTACAAAGACTTCAAAAAGATATTGAGTTATATGTCAGGAAATAGTTGGGATCCATTATTGGGCACTATCACCCTAGAAGATGAGCAATGGAATGATGTTTTTAAGGTATACATTAATAGCAAATGATTTCCACTCCAATGTCTAATCATCTATTGAACTATGGTTGACTTTATGTATTATTGTGAAATTTCTTATAGGTCAATAGGAGAGCTAAGAGGTTTAAAAAAAGTGGTTGCCCGCATTATGCAAAGCTTATGAGAATTTTTGGAGATATTACAGCTATAGGTGTTAGTGCTTGTCCATCAACAAAGCTTCCTTCAGATTCTGAAGATGAAAATGATTTTTGGAGATAATACAAATTTTACTGGTGAAGACAATGGTCCTGAAAAAAGTAGAAAACGAGTTCGAAGGAAGAAAGATGAATTTAGTAGTTTCATTTCTTCATTTATAGATGTGTATGCTGAGAATGCCAAGAGAAGAAATGACATCCTTGAGAAAAGATCTCTTAATTCTATTGCTAGTCAAGTTGGGGAAGGTCAGACATCAAAAGCAAAAGATGATGTCGATGAAGAGTTGATGGAATGCTTCAAAATTTTGAATGCAATGGAGGATCTAGATGGAGACGGCTTATACTAA ATGTCGCAAAATTCATTAGAAAAGCATTGTGCTGATGAGGTCAATGAAACTGATGAGTTGAAAAGTGAGGGACCATGGCCTGACAAGAATGAGACTCTATTTGTTGACTTAATGGATGAAGAGGTTGCAAAGGGCAATCGACCAACTACAACATTTACAAGGACTAGTTGGAATTATATGAGAAACCAACTAAACACTAGTACCGGCTATGCTTATACTCATGATCAATTGAAAAATAAGTTCAACAAATTAAGGCAAAATTACAAAGACTTCAAAAAGATATTGAGTTATATGTCAGGAAATAGTTGGGATCCATTATTGGGCACTATCACCCTAGAAGATGAGCAATGGAATGATGTTTTTAAGGTCAATAGGAGAGCTAAGAGGTTTAAAAAAAGTGGTTGCCCGCATTATGCAAAGCTTATGAGAATTTTTGGAGATATTACAGCTATAGACAATGGTCCTGAAAAAAGTAGAAAACGAGTTCGAAGGAAGAAAGATGAATTTAGTAGTTTCATTTCTTCATTTATAGATGTGTATGCTGAGAATGCCAAGAGAAGAAATGACATCCTTGAGAAAAGATCTCTTAATTCTATTGCTAGTCAAGTTGGGGAAGGTCAGACATCAAAAGCAAAAGATGATGTCGATGAAGAGTTGATGGAATGCTTCAAAATTTTGAATGCAATGGAGGATCTAGATGGAGACGGCTTATACTAA ATGTCGCAAAATTCATTAGAAAAGCATTGTGCTGATGAGGTCAATGAAACTGATGAGTTGAAAAGTGAGGGACCATGGCCTGACAAGAATGAGACTCTATTTGTTGACTTAATGGATGAAGAGGTTGCAAAGGGCAATCGACCAACTACAACATTTACAAGGACTAGTTGGAATTATATGAGAAACCAACTAAACACTAGTACCGGCTATGCTTATACTCATGATCAATTGAAAAATAAGTTCAACAAATTAAGGCAAAATTACAAAGACTTCAAAAAGATATTGAGTTATATGTCAGGAAATAGTTGGGATCCATTATTGGGCACTATCACCCTAGAAGATGAGCAATGGAATGATGTTTTTAAGGTCAATAGGAGAGCTAAGAGGTTTAAAAAAAGTGGTTGCCCGCATTATGCAAAGCTTATGAGAATTTTTGGAGATATTACAGCTATAGACAATGGTCCTGAAAAAAGTAGAAAACGAGTTCGAAGGAAGAAAGATGAATTTAGTAGTTTCATTTCTTCATTTATAGATGTGTATGCTGAGAATGCCAAGAGAAGAAATGACATCCTTGAGAAAAGATCTCTTAATTCTATTGCTAGTCAAGTTGGGGAAGGTCAGACATCAAAAGCAAAAGATGATGTCGATGAAGAGTTGATGGAATGCTTCAAAATTTTGAATGCAATGGAGGATCTAGATGGAGACGGCTTATACTAA MSQNSLEKHCADEVNETDELKSEGPWPDKNETLFVDLMDEEVAKGNRPTTTFTRTSWNYMRNQLNTSTGYAYTHDQLKNKFNKLRQNYKDFKKILSYMSGNSWDPLLGTITLEDEQWNDVFKVNRRAKRFKKSGCPHYAKLMRIFGDITAIDNGPEKSRKRVRRKKDEFSSFISSFIDVYAENAKRRNDILEKRSLNSIASQVGEGQTSKAKDDVDEELMECFKILNAMEDLDGDGLY Homology
BLAST of Lcy02g009650 vs. ExPASy Swiss-Prot
Match: Q9FFJ8 (L10-interacting MYB domain-containing protein OS=Arabidopsis thaliana OX=3702 GN=LIMYB PE=1 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 2.0e-15 Identity = 69/265 (26.04%), Postives = 118/265 (44.53%), Query Frame = 0
BLAST of Lcy02g009650 vs. ExPASy TrEMBL
Match: A0A1S3B8P1 (uncharacterized protein LOC103487000 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487000 PE=4 SV=1) HSP 1 Score: 239.6 bits (610), Expect = 1.4e-59 Identity = 122/270 (45.19%), Postives = 170/270 (62.96%), Query Frame = 0
BLAST of Lcy02g009650 vs. ExPASy TrEMBL
Match: A0A1S4DUG7 (L10-interacting MYB domain-containing protein-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487000 PE=4 SV=1) HSP 1 Score: 238.4 bits (607), Expect = 3.0e-59 Identity = 120/260 (46.15%), Postives = 165/260 (63.46%), Query Frame = 0
BLAST of Lcy02g009650 vs. ExPASy TrEMBL
Match: A0A1S3CFA7 (L10-interacting MYB domain-containing protein-like OS=Cucumis melo OX=3656 GN=LOC103500275 PE=4 SV=1) HSP 1 Score: 232.6 bits (592), Expect = 1.7e-57 Identity = 128/230 (55.65%), Postives = 151/230 (65.65%), Query Frame = 0
BLAST of Lcy02g009650 vs. ExPASy TrEMBL
Match: A0A1S3CTN1 (uncharacterized protein LOC103504323 OS=Cucumis melo OX=3656 GN=LOC103504323 PE=4 SV=1) HSP 1 Score: 206.8 bits (525), Expect = 9.7e-50 Identity = 105/173 (60.69%), Postives = 120/173 (69.36%), Query Frame = 0
BLAST of Lcy02g009650 vs. ExPASy TrEMBL
Match: A0A5D3BNQ5 (L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold233G00100 PE=4 SV=1) HSP 1 Score: 196.8 bits (499), Expect = 1.0e-46 Identity = 99/169 (58.58%), Postives = 115/169 (68.05%), Query Frame = 0
BLAST of Lcy02g009650 vs. NCBI nr
Match: XP_038904552.1 (L10-interacting MYB domain-containing protein-like isoform X1 [Benincasa hispida]) HSP 1 Score: 251.9 bits (642), Expect = 5.5e-63 Identity = 126/269 (46.84%), Postives = 173/269 (64.31%), Query Frame = 0
BLAST of Lcy02g009650 vs. NCBI nr
Match: XP_038904553.1 (L10-interacting MYB domain-containing protein-like isoform X2 [Benincasa hispida]) HSP 1 Score: 251.1 bits (640), Expect = 9.3e-63 Identity = 126/270 (46.67%), Postives = 172/270 (63.70%), Query Frame = 0
BLAST of Lcy02g009650 vs. NCBI nr
Match: XP_038904554.1 (L10-interacting MYB domain-containing protein-like isoform X3 [Benincasa hispida]) HSP 1 Score: 251.1 bits (640), Expect = 9.3e-63 Identity = 125/265 (47.17%), Postives = 171/265 (64.53%), Query Frame = 0
BLAST of Lcy02g009650 vs. NCBI nr
Match: XP_008443406.1 (PREDICTED: uncharacterized protein LOC103487000 isoform X1 [Cucumis melo]) HSP 1 Score: 239.6 bits (610), Expect = 2.8e-59 Identity = 122/270 (45.19%), Postives = 170/270 (62.96%), Query Frame = 0
BLAST of Lcy02g009650 vs. NCBI nr
Match: XP_016899632.1 (PREDICTED: L10-interacting MYB domain-containing protein-like isoform X2 [Cucumis melo]) HSP 1 Score: 238.4 bits (607), Expect = 6.2e-59 Identity = 120/260 (46.15%), Postives = 165/260 (63.46%), Query Frame = 0
BLAST of Lcy02g009650 vs. TAIR 10
Match: AT3G11290.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11310.1); Has 720 Blast hits to 435 proteins in 28 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 32; Plants - 682; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). ) HSP 1 Score: 84.3 bits (207), Expect = 1.4e-16 Identity = 49/150 (32.67%), Postives = 77/150 (51.33%), Query Frame = 0
BLAST of Lcy02g009650 vs. TAIR 10
Match: AT5G05800.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 84.3 bits (207), Expect = 1.4e-16 Identity = 69/265 (26.04%), Postives = 118/265 (44.53%), Query Frame = 0
BLAST of Lcy02g009650 vs. TAIR 10
Match: AT5G05800.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 881 Blast hits to 512 proteins in 30 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 38; Plants - 833; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). ) HSP 1 Score: 84.3 bits (207), Expect = 1.4e-16 Identity = 69/265 (26.04%), Postives = 118/265 (44.53%), Query Frame = 0
BLAST of Lcy02g009650 vs. TAIR 10
Match: AT2G24960.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 1453 Blast hits to 509 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 39; Plants - 1363; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). ) HSP 1 Score: 69.7 bits (169), Expect = 3.6e-12 Identity = 38/121 (31.40%), Postives = 60/121 (49.59%), Query Frame = 0
BLAST of Lcy02g009650 vs. TAIR 10
Match: AT2G24960.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 69.7 bits (169), Expect = 3.6e-12 Identity = 38/121 (31.40%), Postives = 60/121 (49.59%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
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