Lcy02g008100 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy02g008100
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	CCHC-type domain-containing protein
Location	Chr02: 11817414 .. 11818199 (-)
RNA-Seq Expression	Lcy02g008100
Synteny	Lcy02g008100

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTTCATTATGGAATGTTCATAAGGGTAATCGAATTGAGCATGTGGGAGAAAATGTTTTCATCTTCAAATTTCGGTCAGTGGCTGAGAAAATTAGAGTAATGAATGGGGGGCCTTGGACCTTTGATAGAGCTTTGTTGGTCCTTGTGTCGCCCCAGGGGAATGATGATCCAGTGGCAATGGATTTCTCAAAATGTGCTTTCCGGGTTAATTTTTGCAATGTACCTTTGAAATATCTTACATGTGTTATGGCTAGGAATTTTGGGAGTGCTGTGGGTACTGTTGTAGATGTGTATGGTGCAGGACAGGAGGAGTGGATAGGATCTGTTATGCAGGTTCGTGTTTGTATTGAACTTAATAAACCATTGAGGCGTGGTATTCGACTTCGACTTGAGGATGATTCGGTTAGTTGGTGTCCGATTCAATACGAACGTTTGCCCGATTTTTGTTTTCAGTGTGGTAGGATTGGGCATCTGCATCGTGACTGTGTGGTCAGTGGGCATGGGAACAATGCAGACATGGGTTTTCCTTATGGTGATTGGCTTCGGGTTGATTTTTTTCGACTGTCTCGGGGACCTGTGATGACCAGGGGAGTTAATGAATTCCAAGAAAGAGGAGGTCGTCGTGGGTGTGGCCATGGACGGTTTGCTGGGGTTTCATCTGTTAATCGTGAATGTGAGTTTGAGGATGTGTTTGATCCTGGGGATGATGGAGCACTGGTAAACTGTTTGGCCCCGACTGCGATTGTATCACCACCAAATGGTCCTGCAGTGGGTGAGAGTTAG

mRNA sequence

ATGATTTCATTATGGAATGTTCATAAGGGTAATCGAATTGAGCATGTGGGAGAAAATGTTTTCATCTTCAAATTTCGGTCAGTGGCTGAGAAAATTAGAGTAATGAATGGGGGGCCTTGGACCTTTGATAGAGCTTTGTTGGTCCTTGTGTCGCCCCAGGGGAATGATGATCCAGTGGCAATGGATTTCTCAAAATGTGCTTTCCGGGTTAATTTTTGCAATGTACCTTTGAAATATCTTACATGTGTTATGGCTAGGAATTTTGGGAGTGCTGTGGGTACTGTTGTAGATGTGTATGGTGCAGGACAGGAGGAGTGGATAGGATCTGTTATGCAGGTTCGTGTTTGTATTGAACTTAATAAACCATTGAGGCGTGGTATTCGACTTCGACTTGAGGATGATTCGGTTAGTTGGTGTCCGATTCAATACGAACGTTTGCCCGATTTTTGTTTTCAGTGTGGTAGGATTGGGCATCTGCATCGTGACTGTGTGGTCAGTGGGCATGGGAACAATGCAGACATGGGTTTTCCTTATGGTGATTGGCTTCGGGTTGATTTTTTTCGACTGTCTCGGGGACCTGTGATGACCAGGGGAGTTAATGAATTCCAAGAAAGAGGAGGTCGTCGTGGGTGTGGCCATGGACGGTTTGCTGGGGTTTCATCTGTTAATCGTGAATGTGAGTTTGAGGATGTGTTTGATCCTGGGGATGATGGAGCACTGGTAAACTGTTTGGCCCCGACTGCGATTGTATCACCACCAAATGGTCCTGCAGTGGGTGAGAGTTAG

Coding sequence (CDS)

ATGATTTCATTATGGAATGTTCATAAGGGTAATCGAATTGAGCATGTGGGAGAAAATGTTTTCATCTTCAAATTTCGGTCAGTGGCTGAGAAAATTAGAGTAATGAATGGGGGGCCTTGGACCTTTGATAGAGCTTTGTTGGTCCTTGTGTCGCCCCAGGGGAATGATGATCCAGTGGCAATGGATTTCTCAAAATGTGCTTTCCGGGTTAATTTTTGCAATGTACCTTTGAAATATCTTACATGTGTTATGGCTAGGAATTTTGGGAGTGCTGTGGGTACTGTTGTAGATGTGTATGGTGCAGGACAGGAGGAGTGGATAGGATCTGTTATGCAGGTTCGTGTTTGTATTGAACTTAATAAACCATTGAGGCGTGGTATTCGACTTCGACTTGAGGATGATTCGGTTAGTTGGTGTCCGATTCAATACGAACGTTTGCCCGATTTTTGTTTTCAGTGTGGTAGGATTGGGCATCTGCATCGTGACTGTGTGGTCAGTGGGCATGGGAACAATGCAGACATGGGTTTTCCTTATGGTGATTGGCTTCGGGTTGATTTTTTTCGACTGTCTCGGGGACCTGTGATGACCAGGGGAGTTAATGAATTCCAAGAAAGAGGAGGTCGTCGTGGGTGTGGCCATGGACGGTTTGCTGGGGTTTCATCTGTTAATCGTGAATGTGAGTTTGAGGATGTGTTTGATCCTGGGGATGATGGAGCACTGGTAAACTGTTTGGCCCCGACTGCGATTGTATCACCACCAAATGGTCCTGCAGTGGGTGAGAGTTAG

Protein sequence

MISLWNVHKGNRIEHVGENVFIFKFRSVAEKIRVMNGGPWTFDRALLVLVSPQGNDDPVAMDFSKCAFRVNFCNVPLKYLTCVMARNFGSAVGTVVDVYGAGQEEWIGSVMQVRVCIELNKPLRRGIRLRLEDDSVSWCPIQYERLPDFCFQCGRIGHLHRDCVVSGHGNNADMGFPYGDWLRVDFFRLSRGPVMTRGVNEFQERGGRRGCGHGRFAGVSSVNRECEFEDVFDPGDDGALVNCLAPTAIVSPPNGPAVGES

Homology

[Close]

BLAST of Lcy02g008100 vs. ExPASy TrEMBL
Match: A0A6J1D765 (uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017902 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 1.4e-46
Identity = 88/213 (41.31%), Postives = 133/213 (62.44%), Query Frame = 0


Query: 1   MISLWNVHKGNRIEHVGENVFIFKFRSVAEKIRVMNGGPWTFDRALLVLVSPQGNDDPVA 60
           M S+W VH   R E +G N+++  F+S++EK RV++ GPWTF+++LLVL SP   + P+ 
Sbjct: 58  MKSVWRVHNSTRFEPLGMNIYVILFKSLSEKSRVLSSGPWTFNKSLLVLTSPTATNQPLD 117

Query: 61  MDFSKCAFRVNFCNVPLKYLTCVMARNFGSAVGTVVDVYGAGQEEWIGSVMQVRVCIELN 120
           M+F+ CAF +   N+P + ++  MA   G+ +G V ++ G G + W G  ++VRV I+++
Sbjct: 118 MNFNFCAFWIQIHNIPFECISTEMANILGAKLGDVEEIEGDGADGWAGPFIRVRVKIDVS 177

Query: 121 KPLRRGIRLRLEDDSVSWCPIQYERLPDFCFQCGRIGHLHRDCVVSGHGNNADMGFPYGD 180
           KPLRRGI+L+  D    WCP++YE+LPDFC++CG+IGH  R+C         +    YGD
Sbjct: 178 KPLRRGIKLKNSDGKDIWCPLRYEKLPDFCYECGKIGHSGRECEQRSKVVTTNSPEQYGD 237

Query: 181 WLRVDFFRLSRGPVMTRGVNEFQERGGRRGCGH 214
           WLR    + S    ++    E   RGGR G GH
Sbjct: 238 WLRATLLKKS----VSHPEEEVFWRGGRFGRGH 266

[Close]

BLAST of Lcy02g008100 vs. ExPASy TrEMBL
Match: A0A6J1DVS4 (uncharacterized protein LOC111023555 OS=Momordica charantia OX=3673 GN=LOC111023555 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 1.3e-34
Identity = 68/162 (41.98%), Postives = 103/162 (63.58%), Query Frame = 0


Query: 1   MISLWNVHKGNRIEHVGENVFIFKFRSVAEKIRVMNGGPWTFDRALLVLVSPQGNDDPVA 60
           M  +W +H   RIE  G N+++  F+++AEKIRV + GPWTFD++LL+LV     + P+ 
Sbjct: 58  MKQVWKIHNSTRIETAGLNIYVIAFKTMAEKIRVFSLGPWTFDKSLLILVPTTAANKPLD 117

Query: 61  MDFSKCAFRVNFCNVPLKYLTCVMARNFGSAVGTVVDVYGAGQEEWIGSVMQVRVCIELN 120
           +D S CAF V    +  + +T  MA+  G+ +G V +V G    +W+   + VRV I + 
Sbjct: 118 IDISLCAFWVQIHYITFECMTKDMAKFLGARLGEVEEVDGMSSYDWVRPFLWVRVKINVL 177

Query: 121 KPLRRGIRLRLEDDSVSWCPIQYERLPDFCFQCGRIGHLHRD 163
           KPLRRG++++  D    WCP++YERLPDFC+ CG +GH  R+
Sbjct: 178 KPLRRGLKVKTSDGKDIWCPLRYERLPDFCYGCGCVGHSIRE 219

[Close]

BLAST of Lcy02g008100 vs. ExPASy TrEMBL
Match: A0A2N9GWE9 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS31787 PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 1.4e-33
Identity = 90/260 (34.62%), Postives = 130/260 (50.00%), Query Frame = 0


Query: 1   MISLW-NVHKGNRIEHVGENVFIFKFRSVAEKIRVMNGGPWTFDRALLVLVSPQGNDDPV 60
           M+ LW  V +G    ++GEN+F+F+FR   E+ RVM G PW FD +LL+L    G+    
Sbjct: 59  MLRLWGGVARGITARNIGENLFVFQFRDDFERRRVMTGAPWLFDNSLLLLKEFDGSCPAS 118

Query: 61  AMDFSKCAFRVNFCNVPLKYLTCVMARNFGSAVGTVVDVYGAGQEEWIGSVMQVRVCIEL 120
            + FS C F V F  VPL Y+T       GS  G V +V  +      G+ ++VR+C+++
Sbjct: 119 QVQFSWCCFWVQFYGVPLSYMTKQTGEQVGSVFGKVEEVDVSEDGVGWGTYLRVRICLDI 178

Query: 121 NKPLRRGIRLRLEDDSVSWCPIQYERLPDFCFQCGRIGHLHRDCVVSGHGNNADMG--FP 180
            KP+ RG  +        W   +YERLP  CF CG IGHL RDCV  G  N++  G    
Sbjct: 179 TKPIPRGRVVTFNSLGQMWVSFKYERLPWLCFHCGLIGHLERDCVSRGKNNSSSPGGVQQ 238

Query: 181 YGDWLRVDFFRLSRGPVMTRGVNEFQERGGRRGC--GHGRFAGVS---SVNRECEFEDVF 240
           YG WLR      S  P   RG++  +    R G     G  +G +    +NR+ +F++  
Sbjct: 239 YGPWLRA-----SELPSRRRGMDVRRSERVRSGAVLNRGTQSGGNFNFELNRQTDFQEGG 298

Query: 241 DPGDDGALVNCLAPTAIVSP 253
                G + N  A    ++P
Sbjct: 299 STNVQGEVQNNEADKLEINP 313

[Close]

BLAST of Lcy02g008100 vs. ExPASy TrEMBL
Match: A0A5C7GUN1 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_027725 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 2.6e-32
Identity = 75/182 (41.21%), Postives = 106/182 (58.24%), Query Frame = 0


Query: 4   LWNVHKGNRIEHVGENVFIFKFRSVAEKIRVMNGGPWTFDRALLVLVSPQGNDDPVAMDF 63
           +W V  G  IE +  N++ F F+S  ++ RV  GGPW+FD AL+VL  P+G     ++ F
Sbjct: 51  IWKVQGGVEIEVISTNIYAFPFQSFDDRKRVFMGGPWSFDGALIVLEEPEGKGAINSLLF 110

Query: 64  SKCAFRVNFCNVPLKYLTCVMARNFGSAVGTVVDVYGAGQEEWIGSVMQVRVCIELNKPL 123
           +   F V+  NVP+ Y+T  + +  GS +G V +V      + +G  M+VRV +E++KPL
Sbjct: 111 NSVDFWVHITNVPMIYMTKDIGKFLGSIIGEVREVDVGPSSDCLGKFMRVRVAVEVDKPL 170

Query: 124 RRGIRLR-LEDDSVSWCPIQYERLPDFCFQCGRIGHLHRDCVVSGH-GNNADMGFPYGDW 183
           RR +R+  L D   +  PIQYERLP FCF CG +GHL  +C   G  G     G  YG W
Sbjct: 171 RRFLRVDVLGDGEETVMPIQYERLPSFCFLCGLVGHLVHECTSYGEDGLREGSGMVYGAW 230

[Close]

BLAST of Lcy02g008100 vs. ExPASy TrEMBL
Match: A0A314YVX1 (CCHC-type domain-containing protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_17609 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 3.5e-32
Identity = 69/214 (32.24%), Postives = 114/214 (53.27%), Query Frame = 0


Query: 1   MISLWNVHKGNRIEHVGENVFIFKFRSVAEKIRVMNGGPWTFDRALLVLVSPQGNDDPVA 60
           M+ +WN  +   ++ +GEN+F+F F +  ++++V+  GPW FD+AL++L  P G   P  
Sbjct: 59  MLKIWNTAREVVVKDLGENLFLFIFATEGDRLKVLRSGPWNFDKALVLLEVPDGRVAPSK 118

Query: 61  MDFSKCAFRVNFCNVPLKYLTCVMARNFGSAVGTVVDVYGAGQEEWIGSVMQVRVCIELN 120
           M      F +   NVPL  +T  M R  G+++G  +DV        +G  +++RVC++++
Sbjct: 119 MHLKYADFWIQIHNVPLCCMTTNMGRQIGNSLGRCLDVLEGMDGGCLGRFLRIRVCLDVS 178

Query: 121 KPLRRGIRLRLEDDSVSWCPIQYERLPDFCFQCGRIGHLHRDCVVSGHGNNADMGFPYGD 180
           KPL RG +L L   +  +   +YERLP+FCF CGR+GH+ ++C             PYG 
Sbjct: 179 KPLWRGKKLTLPSGNTEFVDFRYERLPEFCFCCGRVGHVFKECAFVDQAAKQACEKPYGI 238

Query: 181 WLRVDFFRLSRGPVMTRGVNEFQERGGRRGCGHG 215
           WL+            T+ +N  +    +R  G G
Sbjct: 239 WLKA-----------TKDLNSTRANNSKRPSGGG 261

[Close]

BLAST of Lcy02g008100 vs. NCBI nr
Match: XP_022149484.1 (uncharacterized protein LOC111017902 [Momordica charantia])

HSP 1 Score: 196.4 bits (498), Expect = 3.0e-46
Identity = 88/213 (41.31%), Postives = 133/213 (62.44%), Query Frame = 0


Query: 1   MISLWNVHKGNRIEHVGENVFIFKFRSVAEKIRVMNGGPWTFDRALLVLVSPQGNDDPVA 60
           M S+W VH   R E +G N+++  F+S++EK RV++ GPWTF+++LLVL SP   + P+ 
Sbjct: 58  MKSVWRVHNSTRFEPLGMNIYVILFKSLSEKSRVLSSGPWTFNKSLLVLTSPTATNQPLD 117

Query: 61  MDFSKCAFRVNFCNVPLKYLTCVMARNFGSAVGTVVDVYGAGQEEWIGSVMQVRVCIELN 120
           M+F+ CAF +   N+P + ++  MA   G+ +G V ++ G G + W G  ++VRV I+++
Sbjct: 118 MNFNFCAFWIQIHNIPFECISTEMANILGAKLGDVEEIEGDGADGWAGPFIRVRVKIDVS 177

Query: 121 KPLRRGIRLRLEDDSVSWCPIQYERLPDFCFQCGRIGHLHRDCVVSGHGNNADMGFPYGD 180
           KPLRRGI+L+  D    WCP++YE+LPDFC++CG+IGH  R+C         +    YGD
Sbjct: 178 KPLRRGIKLKNSDGKDIWCPLRYEKLPDFCYECGKIGHSGRECEQRSKVVTTNSPEQYGD 237

Query: 181 WLRVDFFRLSRGPVMTRGVNEFQERGGRRGCGH 214
           WLR    + S    ++    E   RGGR G GH
Sbjct: 238 WLRATLLKKS----VSHPEEEVFWRGGRFGRGH 266

[Close]

BLAST of Lcy02g008100 vs. NCBI nr
Match: XP_022156711.1 (uncharacterized protein LOC111023555 [Momordica charantia])

HSP 1 Score: 156.8 bits (395), Expect = 2.6e-34
Identity = 68/162 (41.98%), Postives = 103/162 (63.58%), Query Frame = 0


Query: 1   MISLWNVHKGNRIEHVGENVFIFKFRSVAEKIRVMNGGPWTFDRALLVLVSPQGNDDPVA 60
           M  +W +H   RIE  G N+++  F+++AEKIRV + GPWTFD++LL+LV     + P+ 
Sbjct: 58  MKQVWKIHNSTRIETAGLNIYVIAFKTMAEKIRVFSLGPWTFDKSLLILVPTTAANKPLD 117

Query: 61  MDFSKCAFRVNFCNVPLKYLTCVMARNFGSAVGTVVDVYGAGQEEWIGSVMQVRVCIELN 120
           +D S CAF V    +  + +T  MA+  G+ +G V +V G    +W+   + VRV I + 
Sbjct: 118 IDISLCAFWVQIHYITFECMTKDMAKFLGARLGEVEEVDGMSSYDWVRPFLWVRVKINVL 177

Query: 121 KPLRRGIRLRLEDDSVSWCPIQYERLPDFCFQCGRIGHLHRD 163
           KPLRRG++++  D    WCP++YERLPDFC+ CG +GH  R+
Sbjct: 178 KPLRRGLKVKTSDGKDIWCPLRYERLPDFCYGCGCVGHSIRE 219

[Close]

BLAST of Lcy02g008100 vs. NCBI nr
Match: XP_015382410.1 (uncharacterized protein LOC107175497 [Citrus sinensis])

HSP 1 Score: 156.0 bits (393), Expect = 4.5e-34
Identity = 71/183 (38.80%), Postives = 109/183 (59.56%), Query Frame = 0


Query: 1   MISLWNVHKGNRIEHVGENVFIFKFRSVAEKIRVMNGGPWTFDRALLVLVSPQGNDDPVA 60
           M+ +W  +K  RIE +G N+F+FKF   A+K RVM GGPW FD AL+VL  P+G  D   
Sbjct: 60  MLQIWRTNKEVRIESLGSNIFMFKFAVEADKKRVMGGGPWHFDGALMVLTEPKGIGDIAN 119

Query: 61  MDFSKCAFRVNFCNVPLKYLTCVMARNFGSAVGTVVDVYGAGQEEWIGSVMQVRVCIELN 120
             F+   F V+  N+P+ ++   M +  G  +G+V D+    +   IG + ++R+ +++ 
Sbjct: 120 QSFTHTLFWVHLRNMPITWMHRDMVQELGEYIGSVEDIDTDKEGNCIGEIARLRISVDIT 179

Query: 121 KPLRRGIRLRLEDDSVSWCPIQYERLPDFCFQCGRIGHLHRDCVVSGHGNNADMGFPYGD 180
           KPLR+ + +  ED+     PI YERLPDFCF CG IGH +++C+        D+  PYG 
Sbjct: 180 KPLRKFLEVETEDECSIPIPILYERLPDFCFCCGLIGHQYKECIEYKGQPKKDL--PYGY 239

Query: 181 WLR 184
           W++
Sbjct: 240 WMK 240

[Close]

BLAST of Lcy02g008100 vs. NCBI nr
Match: XP_024037025.1 (uncharacterized protein LOC112096996 [Citrus clementina])

HSP 1 Score: 155.2 bits (391), Expect = 7.6e-34
Identity = 71/183 (38.80%), Postives = 109/183 (59.56%), Query Frame = 0


Query: 1   MISLWNVHKGNRIEHVGENVFIFKFRSVAEKIRVMNGGPWTFDRALLVLVSPQGNDDPVA 60
           M+ +W  +K  RIE +G N+F+FKF   A+K RVM GGPW FD AL+VL  P+G  D   
Sbjct: 60  MLQIWRTNKEVRIESLGGNIFMFKFAVEADKKRVMGGGPWHFDGALMVLTEPKGIGDIAN 119

Query: 61  MDFSKCAFRVNFCNVPLKYLTCVMARNFGSAVGTVVDVYGAGQEEWIGSVMQVRVCIELN 120
             F+   F V+  N+P+ ++   M +  G  +G+V D+    +   IG + ++R+ +++ 
Sbjct: 120 QSFTHTLFWVHLRNMPITWMHRDMVQELGEYIGSVEDIDTDKEGNCIGEIARLRISVDIT 179

Query: 121 KPLRRGIRLRLEDDSVSWCPIQYERLPDFCFQCGRIGHLHRDCVVSGHGNNADMGFPYGD 180
           KPLR+ + +  ED+     PI YERLPDFCF CG IGH +++C+        D+  PYG 
Sbjct: 180 KPLRKFLEVETEDECSIPIPILYERLPDFCFCCGLIGHQYKECIEYKGQPKKDL--PYGY 239

Query: 181 WLR 184
           W++
Sbjct: 240 WMK 240

[Close]

BLAST of Lcy02g008100 vs. NCBI nr
Match: XP_024955847.1 (uncharacterized protein LOC112498636 [Citrus sinensis])

HSP 1 Score: 154.8 bits (390), Expect = 1.0e-33
Identity = 70/183 (38.25%), Postives = 109/183 (59.56%), Query Frame = 0


Query: 1   MISLWNVHKGNRIEHVGENVFIFKFRSVAEKIRVMNGGPWTFDRALLVLVSPQGNDDPVA 60
           M+ +W  +K  RIE +G N+F+FKF   A+K RVM GGPW FD AL+VL  P+G  D   
Sbjct: 60  MLQIWRTNKEVRIESLGSNIFMFKFAVEADKKRVMGGGPWHFDGALMVLTEPKGIGDIAN 119

Query: 61  MDFSKCAFRVNFCNVPLKYLTCVMARNFGSAVGTVVDVYGAGQEEWIGSVMQVRVCIELN 120
             F+   F V+  N+P+ ++   M +  G  +G+V ++    +   IG + ++R+ +++ 
Sbjct: 120 QSFTHTLFWVHLRNMPITWMHRDMVQELGEYIGSVEEIDTDEEGNCIGKIARLRISVDIT 179

Query: 121 KPLRRGIRLRLEDDSVSWCPIQYERLPDFCFQCGRIGHLHRDCVVSGHGNNADMGFPYGD 180
           KPLR+ + +  ED+     PI YERLPDFCF CG IGH +++C+        D+  PYG 
Sbjct: 180 KPLRKFLEVETEDEGSIPIPILYERLPDFCFCCGLIGHQYKECIEYKGQPKKDL--PYGY 239

Query: 181 WLR 184
           W++
Sbjct: 240 WMK 240

[Close]

BLAST of Lcy02g008100 vs. TAIR 10
Match: AT3G42140.1 (zinc ion binding;nucleic acid binding )

HSP 1 Score: 48.5 bits (114), Expect = 9.4e-06
Identity = 34/152 (22.37%), Postives = 61/152 (40.13%), Query Frame = 0


Query: 23  FKFRSVAEKIRVMNGGPWTFDRALLVLVSPQGNDDPVAMDFSKCAFRVNFCNVPLKYLTC 82
           F F+S      ++  GPW+F+  + V+   +        +F +  F +    +PL++LT 
Sbjct: 64  FLFQSEESMFSILRRGPWSFNDWMCVI--QRWTKLHSDAEFKRIPFWIQIRGIPLRFLTA 123

Query: 83  VMARNFGSAVGTVVDVYGAGQEEWIGSVMQVRVCIELNKPLRRGIRLRLEDDSVSWCPIQ 142
            +  + G  +G  ++    G++                               VS    Q
Sbjct: 124 RIITSIGERMGLFLET-NLGRD-------------------------------VSVLKFQ 181

Query: 143 YERLPDFCFQCGRIGHLHRDCVVSGH-GNNAD 174
           YE+L +FC  CG + H   +C  SG+ G +AD
Sbjct: 184 YEKLKNFCTTCGMLSHDASECPTSGNQGPHAD 181

The following BLAST results are available for this feature:

BLAST of Lcy02g008100 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy02g008100 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D765	1.4e-46	41.31	uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]
A0A6J1DVS4	1.3e-34	41.98	uncharacterized protein LOC111023555 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A2N9GWE9	1.4e-33	34.62	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS31787 PE=4 SV=1	[more]
A0A5C7GUN1	2.6e-32	41.21	Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_027725 PE=4 SV=1	[more]
A0A314YVX1	3.5e-32	32.24	CCHC-type domain-containing protein OS=Prunus yedoensis var. nudiflora OX=209455...	[more]

BLAST of Lcy02g008100 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022149484.1	3.0e-46	41.31	uncharacterized protein LOC111017902 [Momordica charantia]	[more]
XP_022156711.1	2.6e-34	41.98	uncharacterized protein LOC111023555 [Momordica charantia]	[more]
XP_015382410.1	4.5e-34	38.80	uncharacterized protein LOC107175497 [Citrus sinensis]	[more]
XP_024037025.1	7.6e-34	38.80	uncharacterized protein LOC112096996 [Citrus clementina]	[more]
XP_024955847.1	1.0e-33	38.25	uncharacterized protein LOC112498636 [Citrus sinensis]	[more]

BLAST of Lcy02g008100 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G42140.1	9.4e-06	22.37	zinc ion binding;nucleic acid binding	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025836	Zinc knuckle CX2CX4HX4C	PFAM	PF14392	zf-CCHC_4	coord: 119..163 e-value: 3.6E-13 score: 49.0
IPR025558	Domain of unknown function DUF4283	PFAM	PF14111	DUF4283	coord: 2..115 e-value: 7.6E-12 score: 45.0
IPR040256	Uncharacterized protein At4g02000-like	PANTHER	PTHR31286	GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8-LIKE	coord: 3..163
None	No IPR available	PANTHER	PTHR31286:SF37	SUBFAMILY NOT NAMED	coord: 3..163
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 150..163 score: 10.114237

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy02g008100.1	Lcy02g008100.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding