Lcy02g007790 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy02g007790
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	NAD(P)H-quinone oxidoreductase subunit I, chloroplastic
Location	Chr02: 11169256 .. 11169678 (+)
RNA-Seq Expression	Lcy02g007790
Synteny	Lcy02g007790

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTACTTTATCCCATGCAAATCGTTTGCCTGTAACTATTCAATATCCTTACGAAAAATTAATCGCATCGGAACGTTTCCGCGGTCGAATCCATTTTGAATTTGATAAATGCATTGCTTGTGAAGTATGTGTTCGTGTATGTCCTATTGATCTCCCCGTTGTTGATTGGAAATTGGAAACGGATATTCGAAAGAAACGATTGCTTAATTACAGTATTGATTTCGGGATCTGTATATTTTGTGGTAACTGCGTTGAATATTGCCCAACAAATTGTTTATCAATGACTGAAGAATATGAACTTTCTACTTATGATCGTCACGAATTGAATTATAATCAAATTTCTTTGGGTCGTTTACCAATGTCAGTAGTTGATGATTATACAATTAGAACAATTTTGAATTCGCCTCAAATTGAAGTCTAA

mRNA sequence

ATGATTACTTTATCCCATGCAAATCGTTTGCCTGTAACTATTCAATATCCTTACGAAAAATTAATCGCATCGGAACGTTTCCGCGGTCGAATCCATTTTGAATTTGATAAATGCATTGCTTGTGAAGTATGTGTTCGTGTATGTCCTATTGATCTCCCCGTTGTTGATTGGAAATTGGAAACGGATATTCGAAAGAAACGATTGCTTAATTACAGTATTGATTTCGGGATCTGTATATTTTGTGGTAACTGCGTTGAATATTGCCCAACAAATTGTTTATCAATGACTGAAGAATATGAACTTTCTACTTATGATCGTCACGAATTGAATTATAATCAAATTTCTTTGGGTCGTTTACCAATGTCAGTAGTTGATGATTATACAATTAGAACAATTTTGAATTCGCCTCAAATTGAAGTCTAA

Coding sequence (CDS)

ATGATTACTTTATCCCATGCAAATCGTTTGCCTGTAACTATTCAATATCCTTACGAAAAATTAATCGCATCGGAACGTTTCCGCGGTCGAATCCATTTTGAATTTGATAAATGCATTGCTTGTGAAGTATGTGTTCGTGTATGTCCTATTGATCTCCCCGTTGTTGATTGGAAATTGGAAACGGATATTCGAAAGAAACGATTGCTTAATTACAGTATTGATTTCGGGATCTGTATATTTTGTGGTAACTGCGTTGAATATTGCCCAACAAATTGTTTATCAATGACTGAAGAATATGAACTTTCTACTTATGATCGTCACGAATTGAATTATAATCAAATTTCTTTGGGTCGTTTACCAATGTCAGTAGTTGATGATTATACAATTAGAACAATTTTGAATTCGCCTCAAATTGAAGTCTAA

Protein sequence

MITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELSTYDRHELNYNQISLGRLPMSVVDDYTIRTILNSPQIEV

Homology

[Close]

BLAST of Lcy02g007790 vs. ExPASy Swiss-Prot
Match: Q0ZIW4 (NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Vitis vinifera OX=29760 GN=ndhI PE=3 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 8.2e-78
Identity = 134/138 (97.10%), Postives = 137/138 (99.28%), Query Frame = 0


Query: 1   MITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLE 60
           MITLSHANRLPVTIQYPYEKLI SERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLE
Sbjct: 27  MITLSHANRLPVTIQYPYEKLITSERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLE 86

Query: 61  TDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELSTYDRHELNYNQISLGRLP 120
           TDIRKK+LLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELSTYDRHELNYNQI+LGRLP
Sbjct: 87  TDIRKKQLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELSTYDRHELNYNQIALGRLP 146

Query: 121 MSVVDDYTIRTILNSPQI 139
           MSV+DDYTIRTILNSPQI
Sbjct: 147 MSVIDDYTIRTILNSPQI 164

[Close]

BLAST of Lcy02g007790 vs. ExPASy Swiss-Prot
Match: Q8HVS6 (NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Coespeletia timotensis OX=183013 GN=ndhI PE=3 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 1.4e-77
Identity = 132/140 (94.29%), Postives = 138/140 (98.57%), Query Frame = 0


Query: 1   MITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLE 60
           MITLSHANRLPVTIQYPYEKLI SERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLE
Sbjct: 27  MITLSHANRLPVTIQYPYEKLITSERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLE 86

Query: 61  TDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELSTYDRHELNYNQISLGRLP 120
           TDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELSTYDRHELNYNQI+LGRLP
Sbjct: 87  TDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELSTYDRHELNYNQIALGRLP 146

Query: 121 MSVVDDYTIRTILNSPQIEV 141
           MS++DDYTIRTILN P+I++
Sbjct: 147 MSIIDDYTIRTILNLPEIKI 166

[Close]

BLAST of Lcy02g007790 vs. ExPASy Swiss-Prot
Match: Q8HVV5 (NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Athroisma gracile subsp. psyllioides OX=183107 GN=ndhI PE=3 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 2.4e-77
Identity = 133/139 (95.68%), Postives = 137/139 (98.56%), Query Frame = 0


Query: 1   MITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLE 60
           MITLSHANRLPVTIQYPYEKLI SERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLE
Sbjct: 27  MITLSHANRLPVTIQYPYEKLITSERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLE 86

Query: 61  TDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELSTYDRHELNYNQISLGRLP 120
           TDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELSTYDRHELNYNQI+LGRLP
Sbjct: 87  TDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELSTYDRHELNYNQIALGRLP 146

Query: 121 MSVVDDYTIRTILNSPQIE 140
           MSV+DDYTIRTILN P+I+
Sbjct: 147 MSVIDDYTIRTILNLPEIK 165

[Close]

BLAST of Lcy02g007790 vs. ExPASy Swiss-Prot
Match: Q8HVV2 (NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Blepharispermum zanguebaricum OX=41494 GN=ndhI PE=3 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 2.4e-77
Identity = 133/139 (95.68%), Postives = 137/139 (98.56%), Query Frame = 0


Query: 1   MITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLE 60
           MITLSHANRLPVTIQYPYEKLI SERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLE
Sbjct: 27  MITLSHANRLPVTIQYPYEKLITSERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLE 86

Query: 61  TDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELSTYDRHELNYNQISLGRLP 120
           TDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELSTYDRHELNYNQI+LGRLP
Sbjct: 87  TDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELSTYDRHELNYNQIALGRLP 146

Query: 121 MSVVDDYTIRTILNSPQIE 140
           MSV+DDYTIRTILN P+I+
Sbjct: 147 MSVIDDYTIRTILNLPEIK 165

[Close]

BLAST of Lcy02g007790 vs. ExPASy Swiss-Prot
Match: Q8HVR0 (NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Pentanema britannicum OX=119176 GN=ndhI PE=3 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 2.4e-77
Identity = 133/139 (95.68%), Postives = 137/139 (98.56%), Query Frame = 0


Query: 1   MITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLE 60
           MITLSHANRLPVTIQYPYEKLI SERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLE
Sbjct: 27  MITLSHANRLPVTIQYPYEKLITSERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLE 86

Query: 61  TDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELSTYDRHELNYNQISLGRLP 120
           TDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELSTYDRHELNYNQI+LGRLP
Sbjct: 87  TDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELSTYDRHELNYNQIALGRLP 146

Query: 121 MSVVDDYTIRTILNSPQIE 140
           MSV+DDYTIRTILN P+I+
Sbjct: 147 MSVIDDYTIRTILNLPEIK 165

[Close]

BLAST of Lcy02g007790 vs. ExPASy TrEMBL
Match: A0A6H0EQ77 (NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Luffa aegyptiaca OX=3670 GN=ndhI PE=3 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 1.1e-77
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLE 60
           MITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLE
Sbjct: 27  MITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLE 86

Query: 61  TDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELSTYDRHELNYNQISLGRLP 120
           TDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELSTYDRHELNYNQISLGRLP
Sbjct: 87  TDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELSTYDRHELNYNQISLGRLP 146

Query: 121 MSVVDDYTIRTILNSPQIEV 141
           MSVVDDYTIRTILNSPQIEV
Sbjct: 147 MSVVDDYTIRTILNSPQIEV 166

[Close]

BLAST of Lcy02g007790 vs. ExPASy TrEMBL
Match: A0A0S2IG67 (NADH-quinone oxidoreductase subunit I OS=Cucurbita moschata OX=3662 GN=ndhI PE=3 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 1.1e-77
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLE 60
           MITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLE
Sbjct: 27  MITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLE 86

Query: 61  TDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELSTYDRHELNYNQISLGRLP 120
           TDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELSTYDRHELNYNQISLGRLP
Sbjct: 87  TDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELSTYDRHELNYNQISLGRLP 146

Query: 121 MSVVDDYTIRTILNSPQIEV 141
           MSVVDDYTIRTILNSPQIEV
Sbjct: 147 MSVVDDYTIRTILNSPQIEV 166

[Close]

BLAST of Lcy02g007790 vs. ExPASy TrEMBL
Match: A0A0S2IDY2 (NADH-quinone oxidoreductase subunit I OS=Cucurbita argyrosperma OX=34294 GN=ndhI PE=3 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 1.1e-77
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLE 60
           MITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLE
Sbjct: 27  MITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLE 86

Query: 61  TDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELSTYDRHELNYNQISLGRLP 120
           TDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELSTYDRHELNYNQISLGRLP
Sbjct: 87  TDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELSTYDRHELNYNQISLGRLP 146

Query: 121 MSVVDDYTIRTILNSPQIEV 141
           MSVVDDYTIRTILNSPQIEV
Sbjct: 147 MSVVDDYTIRTILNSPQIEV 166

[Close]

BLAST of Lcy02g007790 vs. ExPASy TrEMBL
Match: A0A7T3QNM9 (NADH-plastoquinone oxidoreductase subunit I OS=Benincasa hispida OX=102211 GN=ndhI PE=4 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 1.1e-77
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLE 60
           MITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLE
Sbjct: 27  MITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLE 86

Query: 61  TDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELSTYDRHELNYNQISLGRLP 120
           TDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELSTYDRHELNYNQISLGRLP
Sbjct: 87  TDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELSTYDRHELNYNQISLGRLP 146

Query: 121 MSVVDDYTIRTILNSPQIEV 141
           MSVVDDYTIRTILNSPQIEV
Sbjct: 147 MSVVDDYTIRTILNSPQIEV 166

[Close]

BLAST of Lcy02g007790 vs. ExPASy TrEMBL
Match: A0A2I6C0F0 (NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Lagenaria siceraria OX=3668 GN=ndhI PE=3 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 1.1e-77
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLE 60
           MITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLE
Sbjct: 27  MITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLE 86

Query: 61  TDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELSTYDRHELNYNQISLGRLP 120
           TDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELSTYDRHELNYNQISLGRLP
Sbjct: 87  TDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELSTYDRHELNYNQISLGRLP 146

Query: 121 MSVVDDYTIRTILNSPQIEV 141
           MSVVDDYTIRTILNSPQIEV
Sbjct: 147 MSVVDDYTIRTILNSPQIEV 166

[Close]

BLAST of Lcy02g007790 vs. NCBI nr
Match: QZL38649.1 (NADH dehydrogenase subunit I [Citrullus naudinianus])

HSP 1 Score: 298.9 bits (764), Expect = 2.3e-77
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLE 60
           MITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLE
Sbjct: 27  MITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLE 86

Query: 61  TDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELSTYDRHELNYNQISLGRLP 120
           TDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELSTYDRHELNYNQISLGRLP
Sbjct: 87  TDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELSTYDRHELNYNQISLGRLP 146

Query: 121 MSVVDDYTIRTILNSPQIEV 141
           MSVVDDYTIRTILNSPQIEV
Sbjct: 147 MSVVDDYTIRTILNSPQIEV 166

[Close]

BLAST of Lcy02g007790 vs. NCBI nr
Match: YP_009447590.1 (NADH dehydrogenase subunit I [Cucurbita moschata] >YP_009456201.1 NADH dehydrogenase subunit I [Lagenaria siceraria] >YP_009505134.1 NADH dehydrogenase subunit I [Cucurbita pepo] >YP_010131144.1 NADH-plastoquinone oxidoreductase subunit I [Benincasa hispida] >ALO21736.1 NdhI [Cucurbita argyrosperma] >ALO21820.1 NdhI [Cucurbita argyrosperma var. palmeri] >ALO21857.1 NdhI [Cucurbita argyrosperma subsp. sororia] >ALO22075.1 NdhI [Cucurbita ecuadorensis] >ALO22139.1 NdhI [Cucurbita ficifolia] >ALO22202.1 NdhI [Cucurbita foetidissima] >ALO22257.1 NdhI [Cucurbita lundelliana] >ALO22451.1 NdhI [Cucurbita okeechobeensis] >ALO22505.1 NdhI [Cucurbita okeechobeensis subsp. martinezii] >ALO22595.1 NdhI [Cucurbita pepo subsp. fraterna] >ALO22615.1 NdhI [Cucurbita pepo subsp. ovifera] >ALO22746.1 NdhI [Cucurbita pepo subsp. pepo] >ALO22813.1 NdhI [Cucurbita pepo var. texana] >ALO22924.1 NdhI [Cucurbita pedatifolia] >QHB76019.1 NADH dehydrogenase subunit I [Cucumis melo subsp. melo] >QIT04103.1 NADH dehydrogenase subunit I [Luffa aegyptiaca] >QKX48529.1 NADH-plastoquinone oxidoreductase subunit I [Luffa acutangula] >QNM38586.1 NADH-plastoquinone oxidoreductase subunit I [Lagenaria siceraria var. microcarpa])

HSP 1 Score: 298.9 bits (764), Expect = 2.3e-77
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLE 60
           MITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLE
Sbjct: 27  MITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLE 86

Query: 61  TDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELSTYDRHELNYNQISLGRLP 120
           TDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELSTYDRHELNYNQISLGRLP
Sbjct: 87  TDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELSTYDRHELNYNQISLGRLP 146

Query: 121 MSVVDDYTIRTILNSPQIEV 141
           MSVVDDYTIRTILNSPQIEV
Sbjct: 147 MSVVDDYTIRTILNSPQIEV 166

[Close]

BLAST of Lcy02g007790 vs. NCBI nr
Match: YP_009326044.1 (NADH dehydrogenase subunit I [Citrullus lanatus] >YP_009348086.1 NADH dehydrogenase subunit I [Citrullus mucosospermus] >YP_009420849.1 NADH dehydrogenase subunit I [Citrullus colocynthis] >YP_009431611.1 NADH dehydrogenase subunit I [Citrullus amarus] >YP_009431697.1 NADH dehydrogenase subunit I [Citrullus rehmii] >APW82517.1 NADH dehydrogenase subunit I [Citrullus lanatus subsp. vulgaris] >QZL38737.1 NADH dehydrogenase subunit I [Citrullus ecirrhosus] >APD52536.1 NADH dehydrogenase subunit I [Citrullus lanatus] >APW82602.1 NADH dehydrogenase subunit I [Citrullus lanatus subsp. vulgaris] >APW82687.1 NADH dehydrogenase subunit I [Citrullus lanatus subsp. vulgaris])

HSP 1 Score: 297.4 bits (760), Expect = 6.7e-77
Identity = 139/140 (99.29%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLE 60
           MITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLE
Sbjct: 27  MITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLE 86

Query: 61  TDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELSTYDRHELNYNQISLGRLP 120
           TDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELSTYDRHELNYNQISLGRLP
Sbjct: 87  TDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELSTYDRHELNYNQISLGRLP 146

Query: 121 MSVVDDYTIRTILNSPQIEV 141
           +SVVDDYTIRTILNSPQIEV
Sbjct: 147 ISVVDDYTIRTILNSPQIEV 166

[Close]

BLAST of Lcy02g007790 vs. NCBI nr
Match: ALO22694.1 (NdhI [Cucurbita pepo var. ozarkana])

HSP 1 Score: 297.4 bits (760), Expect = 6.7e-77
Identity = 139/140 (99.29%), Postives = 139/140 (99.29%), Query Frame = 0


Query: 1   MITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLE 60
           MITLSHANR PVTIQYPYEKLIASERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLE
Sbjct: 27  MITLSHANRFPVTIQYPYEKLIASERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLE 86

Query: 61  TDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELSTYDRHELNYNQISLGRLP 120
           TDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELSTYDRHELNYNQISLGRLP
Sbjct: 87  TDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELSTYDRHELNYNQISLGRLP 146

Query: 121 MSVVDDYTIRTILNSPQIEV 141
           MSVVDDYTIRTILNSPQIEV
Sbjct: 147 MSVVDDYTIRTILNSPQIEV 166

[Close]

BLAST of Lcy02g007790 vs. NCBI nr
Match: YP_009447505.1 (NADH dehydrogenase subunit I [Cucurbita maxima] >ALO22343.1 NdhI [Cucurbita maxima subsp. andreana] >ATY69944.1 NADH dehydrogenase subunit I [Cucurbita maxima])

HSP 1 Score: 297.4 bits (760), Expect = 6.7e-77
Identity = 139/140 (99.29%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLE 60
           +ITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLE
Sbjct: 27  IITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLE 86

Query: 61  TDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELSTYDRHELNYNQISLGRLP 120
           TDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELSTYDRHELNYNQISLGRLP
Sbjct: 87  TDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELSTYDRHELNYNQISLGRLP 146

Query: 121 MSVVDDYTIRTILNSPQIEV 141
           MSVVDDYTIRTILNSPQIEV
Sbjct: 147 MSVVDDYTIRTILNSPQIEV 166

[Close]

BLAST of Lcy02g007790 vs. TAIR 10
Match: ATCG01090.1 (NADPH dehydrogenases )

HSP 1 Score: 283.9 bits (725), Expect = 7.1e-77
Identity = 130/137 (94.89%), Postives = 133/137 (97.08%), Query Frame = 0


Query: 1   MITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLE 60
           MITLSH NRLPVTIQYPYEKLI SERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLE
Sbjct: 27  MITLSHTNRLPVTIQYPYEKLITSERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLE 86

Query: 61  TDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELSTYDRHELNYNQISLGRLP 120
           T+IRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYE STYDRHELNYNQI+LGRLP
Sbjct: 87  TNIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYEFSTYDRHELNYNQIALGRLP 146

Query: 121 MSVVDDYTIRTILNSPQ 138
           MSV+DDYTIRTI NSPQ
Sbjct: 147 MSVIDDYTIRTIWNSPQ 163

[Close]

BLAST of Lcy02g007790 vs. TAIR 10
Match: AT1G16700.1 (Alpha-helical ferredoxin )

HSP 1 Score: 75.5 bits (184), Expect = 3.8e-14
Identity = 42/120 (35.00%), Postives = 61/120 (50.83%), Query Frame = 0


Query: 2   ITLSHANRLPVTIQYPYEKLIASERFRG-----RIHFEFDKCIACEVCVRVCPIDLPVVD 61
           +TL +     VTI YP+EK   S RFRG     R     ++CIAC++C  VCP     ++
Sbjct: 82  LTLKYFFDPKVTINYPFEKGPLSPRFRGEHALRRYPTGEERCIACKLCEAVCPAQAITIE 141

Query: 62  WKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELSTYDRHELNYNQISL 117
            + E +   +R   Y ID   CI+CG C E CP + +     +E +T    EL Y++  L
Sbjct: 142 AE-EREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFATETHEELLYDKEKL 200

[Close]

BLAST of Lcy02g007790 vs. TAIR 10
Match: AT1G79010.1 (Alpha-helical ferredoxin )

HSP 1 Score: 75.5 bits (184), Expect = 3.8e-14
Identity = 42/120 (35.00%), Postives = 61/120 (50.83%), Query Frame = 0


Query: 2   ITLSHANRLPVTIQYPYEKLIASERFRG-----RIHFEFDKCIACEVCVRVCPIDLPVVD 61
           +TL +     VTI YP+EK   S RFRG     R     ++CIAC++C  VCP     ++
Sbjct: 82  LTLKYFFDPKVTINYPFEKGPLSPRFRGEHALRRYPTGEERCIACKLCEAVCPAQAITIE 141

Query: 62  WKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELSTYDRHELNYNQISL 117
            + E +   +R   Y ID   CI+CG C E CP + +     +E +T    EL Y++  L
Sbjct: 142 AE-EREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFATETHEELLYDKEKL 200

The following BLAST results are available for this feature:

BLAST of Lcy02g007790 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0ZIW4	8.2e-78	97.10	NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Vitis vinifera OX=297...	[more]
Q8HVS6	1.4e-77	94.29	NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Coespeletia timotensi...	[more]
Q8HVV5	2.4e-77	95.68	NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Athroisma gracile sub...	[more]
Q8HVV2	2.4e-77	95.68	NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Blepharispermum zangu...	[more]
Q8HVR0	2.4e-77	95.68	NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Pentanema britannicum...	[more]

BLAST of Lcy02g007790 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6H0EQ77	1.1e-77	100.00	NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Luffa aegyptiaca OX=3...	[more]
A0A0S2IG67	1.1e-77	100.00	NADH-quinone oxidoreductase subunit I OS=Cucurbita moschata OX=3662 GN=ndhI PE=3...	[more]
A0A0S2IDY2	1.1e-77	100.00	NADH-quinone oxidoreductase subunit I OS=Cucurbita argyrosperma OX=34294 GN=ndhI...	[more]
A0A7T3QNM9	1.1e-77	100.00	NADH-plastoquinone oxidoreductase subunit I OS=Benincasa hispida OX=102211 GN=nd...	[more]
A0A2I6C0F0	1.1e-77	100.00	NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Lagenaria siceraria O...	[more]

BLAST of Lcy02g007790 vs. NCBI nr


Match Name	E-value	Identity	Description
QZL38649.1	2.3e-77	100.00	NADH dehydrogenase subunit I [Citrullus naudinianus]	[more]
YP_009447590.1	2.3e-77	100.00	NADH dehydrogenase subunit I [Cucurbita moschata] >YP_009456201.1 NADH dehydroge...	[more]
YP_009326044.1	6.7e-77	99.29	NADH dehydrogenase subunit I [Citrullus lanatus] >YP_009348086.1 NADH dehydrogen...	[more]
ALO22694.1	6.7e-77	99.29	NdhI [Cucurbita pepo var. ozarkana]	[more]
YP_009447505.1	6.7e-77	99.29	NADH dehydrogenase subunit I [Cucurbita maxima] >ALO22343.1 NdhI [Cucurbita maxi...	[more]

BLAST of Lcy02g007790 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG01090.1	7.1e-77	94.89	NADPH dehydrogenases	[more]
AT1G16700.1	3.8e-14	35.00	Alpha-helical ferredoxin	[more]
AT1G79010.1	3.8e-14	35.00	Alpha-helical ferredoxin	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010226	NADH-quinone oxidoreductase, chain I	TIGRFAM	TIGR01971	TIGR01971	coord: 1..116 e-value: 8.6E-42 score: 139.5
None	No IPR available	GENE3D	3.30.70.3270		coord: 16..129 e-value: 1.3E-29 score: 105.0
None	No IPR available	PIRSR	PIRSR005784-1	PIRSR005784-1	coord: 34..98 e-value: 8.0E-5 score: 20.5
None	No IPR available	PANTHER	PTHR47275:SF1	NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT I, CHLOROPLASTIC	coord: 1..139
None	No IPR available	SUPERFAMILY	54862	4Fe-4S ferredoxins	coord: 16..114
IPR017896	4Fe-4S ferredoxin-type, iron-sulphur binding domain	PFAM	PF13187	Fer4_9	coord: 37..92 e-value: 9.7E-9 score: 35.3
IPR017896	4Fe-4S ferredoxin-type, iron-sulphur binding domain	PROSITE	PS51379	4FE4S_FER_2	coord: 29..58 score: 9.734557
IPR017896	4Fe-4S ferredoxin-type, iron-sulphur binding domain	PROSITE	PS51379	4FE4S_FER_2	coord: 69..98 score: 10.532633
IPR004497	NADH-plastoquinone oxidoreductase, subunit I	PANTHER	PTHR47275	FAMILY NOT NAMED	coord: 1..139
IPR017900	4Fe-4S ferredoxin, iron-sulphur binding, conserved site	PROSITE	PS00198	4FE4S_FER_1	coord: 78..89

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy02g007790.1	Lcy02g007790.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
biological_process	GO:0019684	photosynthesis, light reaction
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0008137	NADH dehydrogenase (ubiquinone) activity
molecular_function	GO:0048038	quinone binding
molecular_function	GO:0016651	oxidoreductase activity, acting on NAD(P)H