Lcy02g007530 (gene) Sponge gourd (P93075) v1

Overview
NameLcy02g007530
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionUnknown protein
LocationChr02: 10355074 .. 10360385 (+)
RNA-Seq ExpressionLcy02g007530
SyntenyLcy02g007530
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTCACTCTTCAGCAATCAGCAGTTCAGCACATATAAATTGGAAAACAAAAAACCCTAACGTCCTTTTGTCGTTCGAAATCCACAGCCCCGCCCACTTTCAGATCAGCTTCGTCGTTCACCGTCGCCCCACCACTCGCCTTCACCCTTCGCCAGTTCGCCTTCATCTCCCTCGTCGACGATTCATCGCCTTCGAGATTCCGTTTAGCTCACATTCTCAGCAGCGCACATTCGTCGCTGGCAGCTCACATTCTTCAGCAGTCCTCAACTCACATTCGCCTGCAGTGTATGTGCTTTTTTTTTTAGAGTGGAATCTAGTTGTAAGTAAGATTGGAGTTGGAGGATTCAAAATTCTTAAATTATTAATTTAGTTCCTAACCTAACCTAACGTCATCTTTCTGATTCAGTTTCAGCAACGTCATCGCCGGCACACCGTCTTTTTCGACTCACAAGTTGGACTCCTCTGAAGAGTAAGCTTTCAAAACACCATTTTTTTTTTTAAATTAGAACTAGAATTGAAAGCTTAATTTTTAGATTTTTTGGGAAATCTTAATTAGAACTAGAATTGAAAGCTTAATTTTTAGAACTAGAATTGAAAGCTTAATTAGGATTAGAATTAGAATTGAAAGCTTAGACCCCATTTGATAACCATTTGGTTTTTGAAAATTAAGCTTATAAACACTATTTAACATACAAGTTTCTTTGTTTTTCTAATACTCTTCTTTCCATGTTTTTAAAAACCAAGCCAATTTTTGAAAACCAAAAAAACTAGTTTTCAAAAAACAGTTTTTGTTTTTGGAATCTGGCTAGGAATTCAAATGTATCATTGACAATGATGAAAACCAAGGTAGGAAAATTGGGAGAAAATAAGCCTAATTTTCAAAAACCAAAAACCCAAAACCAAATGGTTATCAAACGAGGTCTTAATTTTTTGGGAAATCAACTCACAAGCTTTAGTTTTTAGATTTCAAAAAATAATTTTTGAAAGTTTTAGTGAACTAGAATTGTAAGCTTAATTTTATTAAATTTTCATTTCTAATGTTGAGTGTTTGTTAAATATTAGGGAAAAATACACTTTTGGTCCCTGAGGTTTGAGTTAAGTTACACTTTGTTCCCTAAGTTTTCAAACTCAACAAAATTACCCCTGAGGTTTGAGATAAGGAGCAATTTGGTCCCTGCCATCCATTTTTCCGTTAAAAACTAACGGCTTGCTGACGTGGCGTTGTTTTTTTTTTTTTAATTAAAAATATATTTTTAATTATTTAAATAAAAATATATTAAATTAATTAAAAAATATATTTATTATTATTATTATTATTTCTTTTTTACTTTTTTCTTCTTTCTTCCCCATATCCCTGGACTCATTAACCTTTCTTCTCCATAGCCCCACCGCCGGCAGAAGTCGGCCGGCATGGATTCTTCTTCTCCTTTATTCTTTCCCCAAACTCTCTGTTTTTTTTTTTCTTTTTTTCCTCATTCGTTTTTGGCGTCGGAACCAAAACGCCGTCGCCGCAAGAAGCCAATATATGCAGTTCGTGAAACGCTGCAAGAAGGAACCATCGTTCGTGAAAACGCAGTTGCTGCCGTTCGTGAAACGTCCAGATCTGAAAAAAAAACCCCACAAACAGGCATCGACGTCAAGCGTAAAAAAAAACTCAGATCTGAAAACATCTGGCGCACCGCTGCCGGAAATCGAACAGACGCCGAAACCCATAATGAACGTCGACCAACCGTCGCGCCGCTGTCGGAAATCGAACAGACGTCGAAACCCACGAACGAAACCCACCCGAGAAGCCTACTGTACCGCGCCGCCGCCGTCGAAACCCACGAACGAACCCCATAGCGAATGCCCGCCCTTCGAACGTCGGCGAACCCAGTGGAAGAGAGAGAGAGACGAGCTGGTGCCGTGGGTTTTGCTACCGGTGAATGAAAGAGTGGGTGTTTGGCGGCAAGAAGATAAAAACCCTAAGTTTTCTTCTTTTTTTTGTTGAAAAAAAAGTGAAGAAAAGGGAGAGAGGAAGAGGAAAGAAGAAGAAGAAAAAGGGAGGAGAGAGAATAATGAGATAAGGGGAGAAAAAAAGAGGAAAAAAATGGGAAATGTTTTTTTCCGCCGGTGGCCGGCGACGGAGATGGTGGTGGCTAGCATTGGAGCTTGAAGTTGAATAAAAAGATAGAGAGGAAGAAGATGAAGAAAAAAAAAATAAAAGGAGAAATAAAAGAAAAATAATAAATAAATATTTAATATATTGTTTTATTTAAAAAATTAGAAAAAATATTTTTTTAATAAAAAAAAAATAGGTGCCACGTCAGCAATCTATTAACATTTAACGGAAAAATGGATGGAGGGACTAAAATGTCGAGTTTGAAAACTTAGGGACCAAAGTGTAACTTAACCCAAACCTCAGGGACCAAAAGTGTATTTTTTCCTAAATGTTAATTTCATTCCATGTTTATTTTCACAGAGTCAACATGGATAGTATTATAGAAGAAAGTTCAGTCCATGTTGTGGATGTGGAGAAATCAAGTGGAGTTAAGAAAAGTAAAATGGGTCATTCGAGTCCAACCAAAAAGCGTAAGAATACTAAAATCTCTGTTGTTTGGGATCATTTTGAGAAATTAAAGATTGTGATCCTAATGATCCCTATGCTAAGTGTAAATATTGTGGGGTTAAGTATGCATGTCATTCCAAGCGTAATGGTACCGACAGTTTGAAACACCATTTAGAAAATTGTAAGAAATACCCTTATCAAAGAACGAAAGATCCAGGACAAAAACAATTGGTTTTCAAGCCTAAAGAAGCGATTGATAATTCTGAATCAAAACTTAGTTGTGATACTTTCAGTTTGGAGAGTTGTAGAAGAGCTCTTGCTGAGATGATTATTCTAGATGAATTGCCTTTTAGGTTTGTGGAGAACATAGGTTTTCGAAGATTCATCAACAAATCAATAACCGGCGAGGAGAGGAGAAGAGATTGGAGAGGGAGAGATTTGCCACTGCTTGGCGTTGGTTGCGTCGAGGAGAAGAAACACGAGATGGAGGGACTAAAATGAAACTAAAACCAAACTTCAGAGGCTAAATTGTTGAGTTTGAAAACTCAGGGACCAAAATAAACCTAATATAAACCGTGGCAAATCCAAAACTTTGGGGGCTATATAGAAGTAAAGAAAAATATCAATTTTAATCCTAAAATTTGGTAAGTTGTTTCAATTTTTACCCTAAACTTTCAATGACAACCAATTGCACACTAAACTTGGATTAGTTTTGCAATTTTCTATTTAACTTTAAAAAAAAAAAGTGTCGCAATTTTACCTCATGGTAAATTTTCACTCAAAGAATTTTCTATGTAAATATAAAAGAAAAAGGATGAAATTCAAATAATAAGGTAGATTTTTCTTTTTTCTGGTTTACAAAAATTATACCTTCATTTCATATTATTCCTTTTCTTAAAAATAGTTTACTGAAATTTAAAAATAATTTTATTTATTTTCACATATATTTAATCCAAGAAAATAAAATTTAAATTTAAATTTGTAACTAAAACAAAATTTAATTAGTGTTTTAAATTGTTATCAAAGTAACTGAAAATAAAAAATAAAAAGTAAAACCAAAACAAAAAAAGGGTAAAGACAAAAACGGTCTTCTTTTGCAATACTTAAAAAGGTCTCTCATGGCCAATTTCTTATTACAGCGTTGTCGACCATAGAACTCGGTCTGAGGGGTCAACCCAGTGGCTTCTATGAGGAAGGCGGCGCAAAGGAGGCTCGAGGGCTTGTTAAGGAAGGCGACAAGGGCCGACGAAGGGGGGAAAACGAAAGGCGTTTTCTGGTCCCCCCTGAGTCGGGTGGTGCTCGTGTGGGGGGTGTGGCACGACGAAACAAGGGAATGAAAGGCCGCTTTGCGTTGGAAGCTCTTTACCCTCCCCATAATGAGGGCTCTGTAGTCTTGGGGAGCGTTGAAGCTTGCTCCTTCTCCAAAGTTTTCTTGAAACCAACTTTTTTAAGAAGAGTGTTTAGCATACAATAACTTGTGTATAAAAACACCTTATGAGAAAATGCAACCAAACATATGAGTGTTTAAATTATAAACAATTTTTATACAAGATGTTTTTTAAAAATACATTCGTGAAAAACATTTAAATTAAAATGTATTACAAACGGACCCTTCGTATCCGTTTGGAATACATTTTAATTTAAATATTTTTCAATAATGGATTTTTTAAAAAAACATATTGTATACAAATTGTTTAGAATTTAAACATTCATATATTTGGTTACATTTCATCATAAGTGTTTTTATACACAAGTTATTGCATACTTAAAAACTATTTTTAAAGAAGGGTATGTTTGGTTTAACTTTTCAAGTGTTTAATTTTGAAAAAAAAAAAAATCATTTTGAAATAATTTCTAGTGTCTGACAACCATAAAAAATGACTTATTAGGAAATGTGATTGAGAAATAAACCATTTTGAGAGAAACACTTGATTTTTTTTTTTTTTTTTTTTTTAAAGAGTTTTTAAATATATGATAACTTGTGTATAAAAACACTCATGAGGAAATGTAACAAAACATATGAGTGTTTAAATTATAAACAATTTTTATACAAAATATTTTTTTAAAAATGCATTCTTGAAAAACATTTAAATTAAAATATATTCAAAACGAACCCGAAGTTGGTTTTCAAGTGTTTATTTTAAAATGATTTATTTCTTAATCTCATTTTCTAATAAGTCATTTTAGTGGTTGCCAAACACTAAAATTTTTTTCAAAAATGATTTTTTTTTTAATAAAAAATTAAACACATGAAAAGTTAAACCTAACACCTTCAGTAATTAAAAAGTTGAATACTCTACTCAAACATTTATGGAACTAAACTAAAAAAAAGGTAATTATTTAGATAAGGTAGTTATCATAATTTTGTTCATAAACAATAACAATGAATGAAGCTCAATTTATTAGATTAAAAAAAAAACCAAATTAATCGACCAATTAGGCAATATACATAACTACTGGGTTATCGTTCGGCAACAAAAGGGCGCGTAAAATAAGCGCGTAAATTTACGCGATGATAATTGGAGAAGTGGTCGGTTTGTTATTTTATGAAAAATGAATGGCATAACTGAAAATTCAGGTTTCTATTTCCAATATGCGGGATAGATTTTTCCATCTTTCCTACAGCACGAGAAGTGGAAAGAAACACACCGGACGAGGAGGAGCGAGTAGCAAAGAGGAAGAGAGGCGGAAGATTGCCAATTGAAACCTCGCTGGGGGCTTCGTCTATGGCGTTTAGGGTTTCTGCTTCCAAGTCTCACTGA

mRNA sequence

ATGCTTCACTCTTCAGCAATCAGCAGTTCAGCACATATAAATTGGAAAACAAAAAACCCTAACGTCCTTTTGTCGTTCGAAATCCACAGCCCCGCCCACTTTCAGATCAGCTTCGTCGTTCACCGTCGCCCCACCACTCGCCTTCACCCTTCGCCAGTTCGCCTTCATCTCCCTCGTCGACGATTCATCGCCTTCGAGATTCCGTTTAGCTCACATTCTCAGCAGCGCACATTCGTCGCTGGCAGCTCACATTCTTCAGCAGTCCTCAACTCACATTCGCCTGCAGTTTTCAGCAACGTCATCGCCGGCACACCGTCTTTTTCGACTCACAAGTTGGACTCCTCTGAAGAAGTCAACATGGATAGTATTATAGAAGAAAGTTCAGTCCATGTTGTGGATGTGGAGAAATCAAGTGGAGTTAAGAAAACGTTGTCGACCATAGAACTCGGTCTGAGGGGTCAACCCAGTGGCTTCTATGAGGAAGGCGGCGCAAAGGAGGCTCGAGGGCTTGTTAAGGAAGGCGACAAGGGCCGACGAAGGGGGGAAAACGAAAGGCGTTTTCTGGTCCCCCCTGAGTCGGGTGGTGCTCGTGTGGGGGCACGAGAAGTGGAAAGAAACACACCGGACGAGGAGGAGCGAGTAGCAAAGAGGAAGAGAGGCGGAAGATTGCCAATTGAAACCTCGCTGGGGGCTTCGTCTATGGCGTTTAGGGTTTCTGCTTCCAAGTCTCACTGA

Coding sequence (CDS)

ATGCTTCACTCTTCAGCAATCAGCAGTTCAGCACATATAAATTGGAAAACAAAAAACCCTAACGTCCTTTTGTCGTTCGAAATCCACAGCCCCGCCCACTTTCAGATCAGCTTCGTCGTTCACCGTCGCCCCACCACTCGCCTTCACCCTTCGCCAGTTCGCCTTCATCTCCCTCGTCGACGATTCATCGCCTTCGAGATTCCGTTTAGCTCACATTCTCAGCAGCGCACATTCGTCGCTGGCAGCTCACATTCTTCAGCAGTCCTCAACTCACATTCGCCTGCAGTTTTCAGCAACGTCATCGCCGGCACACCGTCTTTTTCGACTCACAAGTTGGACTCCTCTGAAGAAGTCAACATGGATAGTATTATAGAAGAAAGTTCAGTCCATGTTGTGGATGTGGAGAAATCAAGTGGAGTTAAGAAAACGTTGTCGACCATAGAACTCGGTCTGAGGGGTCAACCCAGTGGCTTCTATGAGGAAGGCGGCGCAAAGGAGGCTCGAGGGCTTGTTAAGGAAGGCGACAAGGGCCGACGAAGGGGGGAAAACGAAAGGCGTTTTCTGGTCCCCCCTGAGTCGGGTGGTGCTCGTGTGGGGGCACGAGAAGTGGAAAGAAACACACCGGACGAGGAGGAGCGAGTAGCAAAGAGGAAGAGAGGCGGAAGATTGCCAATTGAAACCTCGCTGGGGGCTTCGTCTATGGCGTTTAGGGTTTCTGCTTCCAAGTCTCACTGA

Protein sequence

MLHSSAISSSAHINWKTKNPNVLLSFEIHSPAHFQISFVVHRRPTTRLHPSPVRLHLPRRRFIAFEIPFSSHSQQRTFVAGSSHSSAVLNSHSPAVFSNVIAGTPSFSTHKLDSSEEVNMDSIIEESSVHVVDVEKSSGVKKTLSTIELGLRGQPSGFYEEGGAKEARGLVKEGDKGRRRGENERRFLVPPESGGARVGAREVERNTPDEEERVAKRKRGGRLPIETSLGASSMAFRVSASKSH
Homology
[Close]
BLAST of Lcy02g007530 vs. ExPASy TrEMBL
Match: A0A385G2B7 (Uncharacterized protein OS=Ammopiptanthus mongolicus OX=126911 GN=amoMp24 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 8.5e-17
Identity = 48/57 (84.21%), Postives = 49/57 (85.96%), Query Frame = 0 

Query: 140 VKKTLSTIELGLRGQPSGFYEEGGAKEARGLVKEGDKGRRRGENERRFLVPPESGGA 197
           +  T STIE GLRGQP GFYEEGGAKEARGLVKEG KGRRRGENERRFLVPP  GGA
Sbjct: 141 IPSTFSTIEFGLRGQPGGFYEEGGAKEARGLVKEGGKGRRRGENERRFLVPPSPGGA 197

[Close]
BLAST of Lcy02g007530 vs. ExPASy TrEMBL
Match: A0A6A2YR19 (Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111308pilonHSYRG00021 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 1.7e-12
Identity = 41/55 (74.55%), Postives = 44/55 (80.00%), Query Frame = 0 

Query: 140 VKKTLSTIELGLRGQPSGFYEEGGAKEARGLVKEGDKGRRRGENERRFLVPPESG 195
           +  T STIE G RGQP GFYEEGGAKEARGL+KEG KGRRR +NERRFLV P  G
Sbjct: 85  IPSTFSTIEFGPRGQPGGFYEEGGAKEARGLIKEGGKGRRREQNERRFLVSPSRG 139

[Close]
BLAST of Lcy02g007530 vs. ExPASy TrEMBL
Match: A0A1J3J606 (Uncharacterized protein (Fragment) OS=Noccaea caerulescens OX=107243 GN=MP_TR143_c9_g1_i1_g.299 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 2.4e-11
Identity = 40/47 (85.11%), Postives = 41/47 (87.23%), Query Frame = 0 

Query: 150 GLRGQPSGFYEEGGAKEARGLVKEGDKGRRRGENERRFLVPPESGGA 197
           GLRGQP GFYEEGGAK+ARGLVKE  KGRRRGENER FLVPPE  GA
Sbjct: 1   GLRGQPGGFYEEGGAKKARGLVKEDGKGRRRGENERPFLVPPEPEGA 47

[Close]
BLAST of Lcy02g007530 vs. NCBI nr
Match: YP_009526583.1 (hypothetical protein [Ammopiptanthus mongolicus] >AXV54342.1 hypothetical protein [Ammopiptanthus mongolicus])

HSP 1 Score: 97.4 bits (241), Expect = 1.8e-16
Identity = 48/57 (84.21%), Postives = 49/57 (85.96%), Query Frame = 0 

Query: 140 VKKTLSTIELGLRGQPSGFYEEGGAKEARGLVKEGDKGRRRGENERRFLVPPESGGA 197
           +  T STIE GLRGQP GFYEEGGAKEARGLVKEG KGRRRGENERRFLVPP  GGA
Sbjct: 141 IPSTFSTIEFGLRGQPGGFYEEGGAKEARGLVKEGGKGRRRGENERRFLVPPSPGGA 197

[Close]
BLAST of Lcy02g007530 vs. NCBI nr
Match: KAE8646988.1 (hypothetical protein Csa_023852, partial [Cucumis sativus])

HSP 1 Score: 85.1 bits (209), Expect = 9.1e-13
Identity = 52/84 (61.90%), Postives = 55/84 (65.48%), Query Frame = 0 

Query: 145 STIELGLRGQPSGFYEEGGAKEARGLVKEGDKGRRRGENERRFLVPPESGGARVGAREVE 204
           STIE GLRGQP  FYEEGGAKEARGLVKEG K RRRGE ER FLVPPE GGA V      
Sbjct: 2   STIEFGLRGQPGSFYEEGGAKEARGLVKEGGKVRRRGEKERPFLVPPEPGGACVWG---- 61

Query: 205 RNTPDEEERVAKRKRG--GRLPIE 227
                    V +RK+G  GR  +E
Sbjct: 62  ---------VPRRKKGMKGRFALE 72

[Close]
BLAST of Lcy02g007530 vs. NCBI nr
Match: KAE8681803.1 (Detected protein of unknown function [Hibiscus syriacus])

HSP 1 Score: 83.2 bits (204), Expect = 3.4e-12
Identity = 41/55 (74.55%), Postives = 44/55 (80.00%), Query Frame = 0 

Query: 140 VKKTLSTIELGLRGQPSGFYEEGGAKEARGLVKEGDKGRRRGENERRFLVPPESG 195
           +  T STIE G RGQP GFYEEGGAKEARGL+KEG KGRRR +NERRFLV P  G
Sbjct: 85  IPSTFSTIEFGPRGQPGGFYEEGGAKEARGLIKEGGKGRRREQNERRFLVSPSRG 139

[Close]
BLAST of Lcy02g007530 vs. NCBI nr
Match: GEV99934.1 (uncharacterized mitochondrial protein AtMg00810-like [Tanacetum cinerariifolium])

HSP 1 Score: 62.4 bits (150), Expect = 6.3e-06
Identity = 33/41 (80.49%), Postives = 35/41 (85.37%), Query Frame = 0 

Query: 156  SGFYEEGGAKEARGLVKEGDKGRRRGENERRFLVPPESGGA 197
            +G  +EGGAKEARGLVKEG KGRRR ENER FLVPPE GGA
Sbjct: 1598 NGPTKEGGAKEARGLVKEGGKGRRRRENERPFLVPPEPGGA 1638

The following BLAST results are available for this feature:
BLAST of Lcy02g007530 vs.
Match NameE-valueIdentityDescription
BLAST of Lcy02g007530 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A385G2B78.5e-1784.21Uncharacterized protein OS=Ammopiptanthus mongolicus OX=126911 GN=amoMp24 PE=4 S... [more]
A0A6A2YR191.7e-1274.55Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111308pilon... [more]
A0A1J3J6062.4e-1185.11Uncharacterized protein (Fragment) OS=Noccaea caerulescens OX=107243 GN=MP_TR143... [more]
BLAST of Lcy02g007530 vs. NCBI nr
Match NameE-valueIdentityDescription
YP_009526583.11.8e-1684.21hypothetical protein [Ammopiptanthus mongolicus] >AXV54342.1 hypothetical protei... [more]
KAE8646988.19.1e-1361.90hypothetical protein Csa_023852, partial [Cucumis sativus][more]
KAE8681803.13.4e-1274.55Detected protein of unknown function [Hibiscus syriacus][more]
GEV99934.16.3e-0680.49uncharacterized mitochondrial protein AtMg00810-like [Tanacetum cinerariifolium][more]
BLAST of Lcy02g007530 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 171..228
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 198..223
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 171..187

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy02g007530.1Lcy02g007530.1mRNA