Lcy02g007360 (gene) Sponge gourd (P93075) v1

Overview
NameLcy02g007360
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionProtein of unknown function (DUF3511)
LocationChr02: 10087278 .. 10087620 (+)
RNA-Seq ExpressionLcy02g007360
SyntenyLcy02g007360
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGCCAGAGGAAACAGAGAGAGGAGAGGAGGAGCGTTAAAATCACCGTGTAGGTCAGATACGTATATGAGCAGTGAGAATCAACAGCGGTTTCCGGCGTCGGCGACGGCGGCATGGAATACGCAGAGCCATTTGCACGGTGGTTCGTCGTTTTCGAATTCCAACGGCGGCGGGTACGATGAACCGGAGGCTAAAAGGCAACGGCGGATTGCCAAGTACAAGGCCTACGCCGTTGAAAGCAAATTGAAAGCGTCGCTTAGGACTGGGATTCGGTGGGTTAAGATCAAGTGTAGTGAGCTTCTTCATCGTTGATCTTTGATCCAATGATTTACAATTTCAC

mRNA sequence

ATGGCTGCCAGAGGAAACAGAGAGAGGAGAGGAGGAGCGTTAAAATCACCGTGTAGGTCAGATACGTATATGAGCAGTGAGAATCAACAGCGGTTTCCGGCGTCGGCGACGGCGGCATGGAATACGCAGAGCCATTTGCACGGTGGTTCGTCGTTTTCGAATTCCAACGGCGGCGGGTACGATGAACCGGAGGCTAAAAGGCAACGGCGGATTGCCAAGTACAAGGCCTACGCCGTTGAAAGCAAATTGAAAGCGTCGCTTAGGACTGGGATTCGGTGGGTTAAGATCAAGTGTAGTGAGCTTCTTCATCGTTGATCTTTGATCCAATGATTTACAATTTCAC

Coding sequence (CDS)

ATGGCTGCCAGAGGAAACAGAGAGAGGAGAGGAGGAGCGTTAAAATCACCGTGTAGGTCAGATACGTATATGAGCAGTGAGAATCAACAGCGGTTTCCGGCGTCGGCGACGGCGGCATGGAATACGCAGAGCCATTTGCACGGTGGTTCGTCGTTTTCGAATTCCAACGGCGGCGGGTACGATGAACCGGAGGCTAAAAGGCAACGGCGGATTGCCAAGTACAAGGCCTACGCCGTTGAAAGCAAATTGAAAGCGTCGCTTAGGACTGGGATTCGGTGGGTTAAGATCAAGTGTAGTGAGCTTCTTCATCGTTGA

Protein sequence

MAARGNRERRGGALKSPCRSDTYMSSENQQRFPASATAAWNTQSHLHGGSSFSNSNGGGYDEPEAKRQRRIAKYKAYAVESKLKASLRTGIRWVKIKCSELLHR
Homology
BLAST of Lcy02g007360 vs. ExPASy TrEMBL
Match: A0A0A0KCE9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G312030 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 3.0e-27
Identity = 74/104 (71.15%), Postives = 80/104 (76.92%), Query Frame = 0

Query: 1   MAARGNRERRGGALKSPCRSDTYMSSENQQRFPASATAAWNTQSHLHGGSSFSNSNGGGY 60
           MAA+GNRE RGG LKSPCRSDTY           +A  AWNT SHLHGGSS   S   G+
Sbjct: 1   MAAKGNRE-RGGVLKSPCRSDTY----------TAAPTAWNTHSHLHGGSS---SVSNGH 60

Query: 61  DEPEAKRQRRIAKYKAYAVESKLKASLRTGIRWVKIKCSELLHR 105
           DEPE KRQRRIAKYKAYAVESKLK+SLR+GIRWVKIKC+ELL R
Sbjct: 61  DEPEVKRQRRIAKYKAYAVESKLKSSLRSGIRWVKIKCNELLQR 90

BLAST of Lcy02g007360 vs. ExPASy TrEMBL
Match: A0A6J1CB45 (uncharacterized protein LOC111009876 OS=Momordica charantia OX=3673 GN=LOC111009876 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 3.4e-23
Identity = 72/112 (64.29%), Postives = 78/112 (69.64%), Query Frame = 0

Query: 1   MAARGNRERRGGALKSP--CRSDTYMSSEN-----QQRFPASATAAW-NTQSHLHGGSSF 60
           MA  GNRE RG   KS   C SD Y +  N      QRFP    AAW NT  H+HGGSSF
Sbjct: 1   MATGGNRE-RGSEFKSAYICSSDNYGNEMNGRSQVNQRFP----AAWNNTHGHMHGGSSF 60

Query: 61  SNSNGGGYDEPEAKRQRRIAKYKAYAVESKLKASLRTGIRWVKIKCSELLHR 105
           S    GGYDEPEAKRQRRIAKYKAYAVESKLK+S R GIRWVKIKC+++ HR
Sbjct: 61  S----GGYDEPEAKRQRRIAKYKAYAVESKLKSSFRNGIRWVKIKCNDIFHR 103

BLAST of Lcy02g007360 vs. ExPASy TrEMBL
Match: A0A5D3BVC0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G00180 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 6.4e-22
Identity = 72/105 (68.57%), Postives = 77/105 (73.33%), Query Frame = 0

Query: 1   MAARGNRERRGGALKSPCRSDTY-MSSENQQRFPASATAAWNTQSHLHGGSSFSNSNGGG 60
           MA +GNRE  GG LKS CRSD Y  SS+N QRF A+ T AWNT       SS SN    G
Sbjct: 1   MAGKGNRE-GGGVLKSTCRSDMYTSSSDNPQRFTAAPT-AWNT-------SSVSN----G 60

Query: 61  YDEPEAKRQRRIAKYKAYAVESKLKASLRTGIRWVKIKCSELLHR 105
           +DE E KRQRRIAKYKAYAVESKLK+SLR GIRWVKIK SELLHR
Sbjct: 61  HDEQEVKRQRRIAKYKAYAVESKLKSSLRNGIRWVKIKYSELLHR 92

BLAST of Lcy02g007360 vs. ExPASy TrEMBL
Match: A0A444CXT1 (Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=BHM03_00011113 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 5.6e-10
Identity = 35/56 (62.50%), Postives = 44/56 (78.57%), Query Frame = 0

Query: 48  GGSSFSNSNGGGYDEPEAKRQRRIAKYKAYAVESKLKASLRTGIRWVKIKCSELLH 104
           G SS S S+   + +PE KR+RR+A YKAYAVE K+KAS+R G RW+KIKCSEL+H
Sbjct: 71  GASSSSRSSAWCFGDPEMKRRRRVASYKAYAVEGKVKASIRKGFRWIKIKCSELIH 126

BLAST of Lcy02g007360 vs. ExPASy TrEMBL
Match: M0TP99 (Uncharacterized protein OS=Musa acuminata subsp. malaccensis OX=214687 GN=103993342 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 9.6e-10
Identity = 34/54 (62.96%), Postives = 44/54 (81.48%), Query Frame = 0

Query: 50  SSFSNSNGGGYDEPEAKRQRRIAKYKAYAVESKLKASLRTGIRWVKIKCSELLH 104
           SS S S+   + +PE KR+RR+AKYKAYAVE K+K+S+R G RW+KIKCSEL+H
Sbjct: 74  SSSSRSSAWCFGDPEMKRRRRVAKYKAYAVEGKVKSSIRKGFRWIKIKCSELIH 127

BLAST of Lcy02g007360 vs. NCBI nr
Match: KAG7026338.1 (hypothetical protein SDJN02_12839, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 142.1 bits (357), Expect = 2.7e-30
Identity = 76/104 (73.08%), Postives = 86/104 (82.69%), Query Frame = 0

Query: 1   MAARGNRERRGGALKSPCRSDTYMSSENQQRFPASATAAWNTQSHLHGGSSFSNSNGGGY 60
           MAARG+ E RGG LKSPCRSDTY+ +ENQQ+FPA+ TAA N  SHLHGGS+FS    GG 
Sbjct: 1   MAARGHTE-RGGQLKSPCRSDTYIDTENQQQFPAAQTAAGNRHSHLHGGSTFSK---GGS 60

Query: 61  DEPEAKRQRRIAKYKAYAVESKLKASLRTGIRWVKIKCSELLHR 105
           DE E KRQ+RIAKYKAYAVESK KAS+R+GIRWVKIKC +LL R
Sbjct: 61  DESEVKRQKRIAKYKAYAVESKFKASIRSGIRWVKIKCGDLLRR 100

BLAST of Lcy02g007360 vs. NCBI nr
Match: KGN47400.1 (hypothetical protein Csa_023055 [Cucumis sativus])

HSP 1 Score: 131.0 bits (328), Expect = 6.1e-27
Identity = 74/104 (71.15%), Postives = 80/104 (76.92%), Query Frame = 0

Query: 1   MAARGNRERRGGALKSPCRSDTYMSSENQQRFPASATAAWNTQSHLHGGSSFSNSNGGGY 60
           MAA+GNRE RGG LKSPCRSDTY           +A  AWNT SHLHGGSS   S   G+
Sbjct: 1   MAAKGNRE-RGGVLKSPCRSDTY----------TAAPTAWNTHSHLHGGSS---SVSNGH 60

Query: 61  DEPEAKRQRRIAKYKAYAVESKLKASLRTGIRWVKIKCSELLHR 105
           DEPE KRQRRIAKYKAYAVESKLK+SLR+GIRWVKIKC+ELL R
Sbjct: 61  DEPEVKRQRRIAKYKAYAVESKLKSSLRSGIRWVKIKCNELLQR 90

BLAST of Lcy02g007360 vs. NCBI nr
Match: KAG6593998.1 (hypothetical protein SDJN03_13474, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 122.1 bits (305), Expect = 2.8e-24
Identity = 67/92 (72.83%), Postives = 76/92 (82.61%), Query Frame = 0

Query: 1  MAARGNRERRGGALKSPCRSDTYMSSENQQRFPASATAAWNTQSHLHGGSSFSNSNGGGY 60
          MAARG+ E RGG LKSPCRSDTY+ +ENQQ+FPA+ TAA N  SHLHGGS+FS    GG 
Sbjct: 1  MAARGHTE-RGGQLKSPCRSDTYIDTENQQQFPAAQTAAGNRHSHLHGGSTFSK---GGS 60

Query: 61 DEPEAKRQRRIAKYKAYAVESKLKASLRTGIR 93
          DE E KRQ+RIAKYKAYAVESK KAS+R+GIR
Sbjct: 61 DESEVKRQKRIAKYKAYAVESKFKASIRSGIR 88

BLAST of Lcy02g007360 vs. NCBI nr
Match: XP_022138799.1 (uncharacterized protein LOC111009876 [Momordica charantia])

HSP 1 Score: 117.5 bits (293), Expect = 7.0e-23
Identity = 72/112 (64.29%), Postives = 78/112 (69.64%), Query Frame = 0

Query: 1   MAARGNRERRGGALKSP--CRSDTYMSSEN-----QQRFPASATAAW-NTQSHLHGGSSF 60
           MA  GNRE RG   KS   C SD Y +  N      QRFP    AAW NT  H+HGGSSF
Sbjct: 1   MATGGNRE-RGSEFKSAYICSSDNYGNEMNGRSQVNQRFP----AAWNNTHGHMHGGSSF 60

Query: 61  SNSNGGGYDEPEAKRQRRIAKYKAYAVESKLKASLRTGIRWVKIKCSELLHR 105
           S    GGYDEPEAKRQRRIAKYKAYAVESKLK+S R GIRWVKIKC+++ HR
Sbjct: 61  S----GGYDEPEAKRQRRIAKYKAYAVESKLKSSFRNGIRWVKIKCNDIFHR 103

BLAST of Lcy02g007360 vs. NCBI nr
Match: TYK02938.1 (hypothetical protein E5676_scaffold46G00180 [Cucumis melo var. makuwa])

HSP 1 Score: 113.2 bits (282), Expect = 1.3e-21
Identity = 72/105 (68.57%), Postives = 77/105 (73.33%), Query Frame = 0

Query: 1   MAARGNRERRGGALKSPCRSDTY-MSSENQQRFPASATAAWNTQSHLHGGSSFSNSNGGG 60
           MA +GNRE  GG LKS CRSD Y  SS+N QRF A+ T AWNT       SS SN    G
Sbjct: 1   MAGKGNRE-GGGVLKSTCRSDMYTSSSDNPQRFTAAPT-AWNT-------SSVSN----G 60

Query: 61  YDEPEAKRQRRIAKYKAYAVESKLKASLRTGIRWVKIKCSELLHR 105
           +DE E KRQRRIAKYKAYAVESKLK+SLR GIRWVKIK SELLHR
Sbjct: 61  HDEQEVKRQRRIAKYKAYAVESKLKSSLRNGIRWVKIKYSELLHR 92

BLAST of Lcy02g007360 vs. TAIR 10
Match: AT2G47480.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 60.8 bits (146), Expect = 7.3e-10
Identity = 25/47 (53.19%), Postives = 37/47 (78.72%), Query Frame = 0

Query: 58  GGYDEPEAKRQRRIAKYKAYAVESKLKASLRTGIRWVKIKCSELLHR 105
           GG  + E KR++RIA+YKAY VE K+K++L+ G RW+K KC +++HR
Sbjct: 63  GGLSDAEMKRKKRIARYKAYTVEGKVKSTLKNGFRWIKNKCCQIVHR 109

BLAST of Lcy02g007360 vs. TAIR 10
Match: AT3G05725.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 57.8 bits (138), Expect = 6.1e-09
Identity = 31/87 (35.63%), Postives = 50/87 (57.47%), Query Frame = 0

Query: 23  YMSSENQQRFPASATAAWNTQSHL------HGGSSFSNSNGGGYDEPEAKRQRRIAKYKA 82
           Y+  E+++      T  W   S+          SS S    G +++PE KR+RR+AKYK 
Sbjct: 36  YVVRESRRNRSPIKTDIWRKMSYKDMPVRPRRSSSHSTLFKGWWNDPEIKRKRRVAKYKL 95

Query: 83  YAVESKLKASLRTGIRWVKIKCSELLH 104
           Y+ E K+K +LR   +W+KI+CS+++H
Sbjct: 96  YSAEGKMKITLRKSYKWIKIQCSKIIH 122

BLAST of Lcy02g007360 vs. TAIR 10
Match: AT2G19460.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 52.8 bits (125), Expect = 2.0e-07
Identity = 22/51 (43.14%), Postives = 37/51 (72.55%), Query Frame = 0

Query: 53  SNSNGGGYDEPEAKRQRRIAKYKAYAVESKLKASLRTGIRWVKIKCSELLH 104
           S+S+  G+ +P+ +R++R+  Y+AY VE KLK S R   +W+K KC++LL+
Sbjct: 66  SSSSSWGFVDPDLQRKKRVVSYRAYTVEGKLKGSFRKSFKWIKDKCNKLLN 116

BLAST of Lcy02g007360 vs. TAIR 10
Match: AT3G62640.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 46.2 bits (108), Expect = 1.9e-05
Identity = 18/42 (42.86%), Postives = 31/42 (73.81%), Query Frame = 0

Query: 62  EPEAKRQRRIAKYKAYAVESKLKASLRTGIRWVKIKCSELLH 104
           + E KR++RIA YK YA+E K+K++++ G  W+K + S ++H
Sbjct: 68  DAETKRKKRIATYKTYALEGKVKSTVKKGFHWIKDRYSHIIH 109

BLAST of Lcy02g007360 vs. TAIR 10
Match: AT5G11970.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 46.2 bits (108), Expect = 1.9e-05
Identity = 20/53 (37.74%), Postives = 34/53 (64.15%), Query Frame = 0

Query: 51  SFSNSNGGGYDEPEAKRQRRIAKYKAYAVESKLKASLRTGIRWVKIKCSELLH 104
           S + S   G  +PE +R++R+A YK Y VE K+K S R   RW+K + +++++
Sbjct: 50  SIARSKSWGITDPELQRKKRVASYKMYGVEGKVKGSFRNSFRWLKQRYTQVVY 102

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KCE93.0e-2771.15Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G312030 PE=4 SV=1[more]
A0A6J1CB453.4e-2364.29uncharacterized protein LOC111009876 OS=Momordica charantia OX=3673 GN=LOC111009... [more]
A0A5D3BVC06.4e-2268.57Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A444CXT15.6e-1062.50Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=BHM03_00011113 PE=4 SV=... [more]
M0TP999.6e-1062.96Uncharacterized protein OS=Musa acuminata subsp. malaccensis OX=214687 GN=103993... [more]
Match NameE-valueIdentityDescription
KAG7026338.12.7e-3073.08hypothetical protein SDJN02_12839, partial [Cucurbita argyrosperma subsp. argyro... [more]
KGN47400.16.1e-2771.15hypothetical protein Csa_023055 [Cucumis sativus][more]
KAG6593998.12.8e-2472.83hypothetical protein SDJN03_13474, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022138799.17.0e-2364.29uncharacterized protein LOC111009876 [Momordica charantia][more]
TYK02938.11.3e-2168.57hypothetical protein E5676_scaffold46G00180 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
AT2G47480.17.3e-1053.19Protein of unknown function (DUF3511) [more]
AT3G05725.16.1e-0935.63Protein of unknown function (DUF3511) [more]
AT2G19460.12.0e-0743.14Protein of unknown function (DUF3511) [more]
AT3G62640.11.9e-0542.86Protein of unknown function (DUF3511) [more]
AT5G11970.11.9e-0537.74Protein of unknown function (DUF3511) [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021899Protein of unknown function DUF3511PFAMPF12023DUF3511coord: 61..103
e-value: 2.9E-21
score: 75.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 19..58
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..66
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..15
NoneNo IPR availablePANTHERPTHR33193:SF13DOMAIN PROTEIN, PUTATIVE (DUF3511)-RELATEDcoord: 27..103
NoneNo IPR availablePANTHERPTHR33193DOMAIN PROTEIN, PUTATIVE (DUF3511)-RELATEDcoord: 27..103

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy02g007360.1Lcy02g007360.1mRNA