Lcy02g006820 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy02g006820
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	protein RALF-like 33
Location	Chr02: 9169889 .. 9170866 (+)
RNA-Seq Expression	Lcy02g006820
Synteny	Lcy02g006820

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCTCTCGAAACCAACAGAACCTCCAAAATGGGAATCTCACGCGTTTCTTCTCTCCTTGCTGCCGTCGCCATTCTCGCCTCTCACTTTCTTCTCATCTCATCGGCGATGCCCGTCGATTTCTCCGCCGACCACAACCTCCTCTTCGTTCCGGCAAAATCCGAGTGCCGAGGCTCAATCGCCGAGTGCTTCCTCGCCGATTCCGCTTTCGGAACGGAGTTCGAGATGGACTCTGAGATCAATCGCCGAATTTTAGCGACTACTCGCTACATCAGCTATGGCGCTCTGAGAAGGAACAACATTCCTTGCTCTCGCCGCGGTGCTTCTTACTACAACTGCCGGCCAGGTGCTCAGGCGAATCCTTACACCCGCGGTTGCAGCGCCATCACTCGCTGCCGGAGTTGATTTCTCACTCGATTCTTTTTTTGGATTTAGATTCGTCGTCGTACTCTACCGGTTAGTTCTTCGCGTGTTTATACTGAATATACATGTCGATTTGAGTAATAAGATCCATACTGATGATTGAAAATGTAATTTAAATCCGTTTCTCCGAGTCTTCTATATGATTTTTTTCGTGGCTGATTCTGGTTGTCTCCAGAAACATTTGTTATTGTTTGCAATTGGTAATACAGTGGTAGGAAGAACACACAGTATTTTGTGTAAATTGGTGGTGGATCTTGCTGGATTTACAGGGACCTTTACTTGAGTTCTTTGTTTGTTCATGATCATTTATTCATTTTATATTACTTTCTTTTTATTTATTCATTTATTTTGGTTGGTTGAATTTTTGGCTGTCACGTTTGGGCTGTCCAAATAGGTGCAGATTTTTTTTTTCTTTTTTAACATCATTTTTATTATTATTATTATTTCTTATTCCATCCTAATCTGGATAGAATGTTCTAACTAACTTTCCAAAAATATTAATAATTGTTTTAAATTTCATATTTCAAAGAAATGTATTACTGGACCACCAAGTTCTT

mRNA sequence

TCCTCTCGAAACCAACAGAACCTCCAAAATGGGAATCTCACGCGTTTCTTCTCTCCTTGCTGCCGTCGCCATTCTCGCCTCTCACTTTCTTCTCATCTCATCGGCGATGCCCGTCGATTTCTCCGCCGACCACAACCTCCTCTTCGTTCCGGCAAAATCCGAGTGCCGAGGCTCAATCGCCGAGTGCTTCCTCGCCGATTCCGCTTTCGGAACGGAGTTCGAGATGGACTCTGAGATCAATCGCCGAATTTTAGCGACTACTCGCTACATCAGCTATGGCGCTCTGAGAAGGAACAACATTCCTTGCTCTCGCCGCGGTGCTTCTTACTACAACTGCCGGCCAGGTGCTCAGGCGAATCCTTACACCCGCGGTTGCAGCGCCATCACTCGCTGCCGGAGTTGATTTCTCACTCGATTCTTTTTTTGGATTTAGATTCGTCGTCGTACTCTACCGGTTAGTTCTTCGCGTGTTTATACTGAATATACATGTCGATTTGAGTAATAAGATCCATACTGATGATTGAAAATGTAATTTAAATCCGTTTCTCCGAGTCTTCTATATGATTTTTTTCGTGGCTGATTCTGGTTGTCTCCAGAAACATTTGTTATTGTTTGCAATTGGTAATACAGTGGTAGGAAGAACACACAGTATTTTGTGTAAATTGGTGGTGGATCTTGCTGGATTTACAGGGACCTTTACTTGAGTTCTTTGTTTGTTCATGATCATTTATTCATTTTATATTACTTTCTTTTTATTTATTCATTTATTTTGGTTGGTTGAATTTTTGGCTGTCACGTTTGGGCTGTCCAAATAGGTGCAGATTTTTTTTTTCTTTTTTAACATCATTTTTATTATTATTATTATTTCTTATTCCATCCTAATCTGGATAGAATGTTCTAACTAACTTTCCAAAAATATTAATAATTGTTTTAAATTTCATATTTCAAAGAAATGTATTACTGGACCACCAAGTTCTT

Coding sequence (CDS)

ATGGGAATCTCACGCGTTTCTTCTCTCCTTGCTGCCGTCGCCATTCTCGCCTCTCACTTTCTTCTCATCTCATCGGCGATGCCCGTCGATTTCTCCGCCGACCACAACCTCCTCTTCGTTCCGGCAAAATCCGAGTGCCGAGGCTCAATCGCCGAGTGCTTCCTCGCCGATTCCGCTTTCGGAACGGAGTTCGAGATGGACTCTGAGATCAATCGCCGAATTTTAGCGACTACTCGCTACATCAGCTATGGCGCTCTGAGAAGGAACAACATTCCTTGCTCTCGCCGCGGTGCTTCTTACTACAACTGCCGGCCAGGTGCTCAGGCGAATCCTTACACCCGCGGTTGCAGCGCCATCACTCGCTGCCGGAGTTGA

Protein sequence

MGISRVSSLLAAVAILASHFLLISSAMPVDFSADHNLLFVPAKSECRGSIAECFLADSAFGTEFEMDSEINRRILATTRYISYGALRRNNIPCSRRGASYYNCRPGAQANPYTRGCSAITRCRS

Homology

[Close]

BLAST of Lcy02g006820 vs. ExPASy Swiss-Prot
Match: Q8L9P8 (Protein RALF-like 33 OS=Arabidopsis thaliana OX=3702 GN=RALFL33 PE=2 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 2.4e-33
Identity = 77/111 (69.37%), Postives = 86/111 (77.48%), Query Frame = 0


Query: 13  VAILASHFLLISSAMPVDFSADHNLLFVPAKSECRGSIAECFLADSAFGTEFEMDSEINR 72
           +AIL  HFL   +A+    S D    FVP +S+C G+IAEC L  S    EFEMDSEINR
Sbjct: 13  IAILTVHFLF--AAVTSQSSGD----FVPIESKCNGTIAECSL--STAEEEFEMDSEINR 72

Query: 73  RILATTRYISYGALRRNNIPCSRRGASYYNCRPGAQANPYTRGCSAITRCR 124
           RILATT+YISYGALRRN +PCSRRGASYYNCR GAQANPY+RGCSAITRCR
Sbjct: 73  RILATTKYISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAITRCR 115

[Close]

BLAST of Lcy02g006820 vs. ExPASy Swiss-Prot
Match: Q9LUS7 (Rapid alkalinization factor 23 OS=Arabidopsis thaliana OX=3702 GN=RALF23 PE=1 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 2.1e-32
Identity = 80/138 (57.97%), Postives = 94/138 (68.12%), Query Frame = 0


Query: 2   GISR---VSSLLAAVAILASH-FLLISSAMPVDFSADHNLLFVPAKSECRGSIAEC---- 61
           G+SR    +++ A + ILA H + +  S+   +F+ D    F P ++ECRG+IAEC    
Sbjct: 3   GLSRNSGAAAIFAILLILAVHNWSVAVSSQSTEFAGD----FPPFETECRGTIAECSVSA 62

Query: 62  --------FLADSAFGTEFEMDSEINRRILATTRYISYGALRRNNIPCSRRGASYYNCRP 121
                   F      G EFEMDSEINRRILAT RYISYGALRRN IPCSRRGASYYNCR 
Sbjct: 63  ALGDGGDLFYGGGEMGEEFEMDSEINRRILATRRYISYGALRRNTIPCSRRGASYYNCRR 122

Query: 122 GAQANPYTRGCSAITRCR 124
           GAQANPY+RGCSAITRCR
Sbjct: 123 GAQANPYSRGCSAITRCR 136

[Close]

BLAST of Lcy02g006820 vs. ExPASy Swiss-Prot
Match: Q945T0 (Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.1e-28
Identity = 61/87 (70.11%), Postives = 73/87 (83.91%), Query Frame = 0


Query: 40  VPAKS--ECRGSIAECFLADSAFGTEFEMDSEINRRILATTRYISYGALRRNNIPCSRRG 99
           +PA+S   C+GSI EC   +     EFE+DSE NRRILAT +YISYGAL++N++PCSRRG
Sbjct: 33  MPARSGGGCKGSIGECIAEEE----EFELDSESNRRILATKKYISYGALQKNSVPCSRRG 92

Query: 100 ASYYNCRPGAQANPYTRGCSAITRCRS 125
           ASYYNC+PGAQANPY+RGCSAITRCRS
Sbjct: 93  ASYYNCKPGAQANPYSRGCSAITRCRS 115

[Close]

BLAST of Lcy02g006820 vs. ExPASy Swiss-Prot
Match: Q9SRY3 (Protein RALF-like 1 OS=Arabidopsis thaliana OX=3702 GN=RALF1 PE=1 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 2.2e-26
Identity = 59/81 (72.84%), Postives = 67/81 (82.72%), Query Frame = 0


Query: 44  SECRGSIAECFLADSAFGTEFEMDSEINRRILATTRYISYGALRRNNIPCSRRGASYYNC 103
           S C GSIAEC  A+     E EMDSEINRRILATT+YISY +L+RN++PCSRRGASYYNC
Sbjct: 45  SGCHGSIAECIGAE-----EEEMDSEINRRILATTKYISYQSLKRNSVPCSRRGASYYNC 104

Query: 104 RPGAQANPYTRGCSAITRCRS 125
           + GAQANPY+RGCS I RCRS
Sbjct: 105 QNGAQANPYSRGCSKIARCRS 120

[Close]

BLAST of Lcy02g006820 vs. ExPASy Swiss-Prot
Match: Q9MA62 (Protein RALF-like 22 OS=Arabidopsis thaliana OX=3702 GN=RALFL22 PE=3 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 3.2e-25
Identity = 66/126 (52.38%), Postives = 84/126 (66.67%), Query Frame = 0


Query: 3   ISRVSSLLAAVAILASHFLLISSAMPVDFSADHNLLFVPAKSE-----CRGSIAECFLAD 62
           ++   ++ A +AILA    ++ SA+        +L FV A S      C GSIAEC   +
Sbjct: 1   MTNTRAIYAVIAILA----IVISAVESTGDFGDSLDFVRAGSSSLFSGCTGSIAECIAEE 60

Query: 63  SAFGTEFEMDSEINRRILATTRYISYGALRRNNIPCSRRGASYYNCRPGAQANPYTRGCS 122
                E E DS+I+RRILA  +YISYGA+RRN++PCSRRGASYYNC+ GAQANPY+RGCS
Sbjct: 61  E----EMEFDSDISRRILAQKKYISYGAMRRNSVPCSRRGASYYNCQRGAQANPYSRGCS 118

Query: 123 AITRCR 124
            ITRCR
Sbjct: 121 TITRCR 118

[Close]

BLAST of Lcy02g006820 vs. ExPASy TrEMBL
Match: A0A6J1H3W7 (protein RALF-like 33 OS=Cucurbita moschata OX=3662 GN=LOC111460267 PE=3 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 8.7e-50
Identity = 104/128 (81.25%), Postives = 115/128 (89.84%), Query Frame = 0


Query: 1   MGISRVSSLLAAVAILASHFLLISSAMPVDFSADHNLLFVPAKSECRGSIAECFLA---- 60
           MGISRVS+L+AA A+LA+HFL++S+A  +DFS D+ +LF P KSECRGSIAECFLA    
Sbjct: 1   MGISRVSALIAAFAVLAAHFLILSAA-AIDFSGDNEILFAPTKSECRGSIAECFLAGNDD 60

Query: 61  DSAFGTEFEMDSEINRRILATTRYISYGALRRNNIPCSRRGASYYNCRPGAQANPYTRGC 120
           DS FG EFEMDSEINRRILATTRYISYGALRRNN+PCSRRGASYYNCRPGAQANPYTRGC
Sbjct: 61  DSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGC 120

Query: 121 SAITRCRS 125
           SAITRCRS
Sbjct: 121 SAITRCRS 127

[Close]

BLAST of Lcy02g006820 vs. ExPASy TrEMBL
Match: A0A6J1KVY0 (protein RALF-like 33 OS=Cucurbita maxima OX=3661 GN=LOC111499183 PE=3 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 1.5e-49
Identity = 105/128 (82.03%), Postives = 113/128 (88.28%), Query Frame = 0


Query: 1   MGISRVSSLLAAVAILASHFLLISSAMPVDFSADHNLLFVPAKSECRGSIAECFLA---- 60
           MGISRVS+L+AA A+LA+HF LISSA  +DFS D+ +LF P KSECRGSI ECFLA    
Sbjct: 1   MGISRVSALIAAFAVLAAHF-LISSATAIDFSGDNEILFAPTKSECRGSITECFLAGNYD 60

Query: 61  DSAFGTEFEMDSEINRRILATTRYISYGALRRNNIPCSRRGASYYNCRPGAQANPYTRGC 120
           DS FG EFEMDSEINRRILATTRYISYGALRRNN+PCSRRGASYYNCRPGAQANPYTRGC
Sbjct: 61  DSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGC 120

Query: 121 SAITRCRS 125
           SAITRCRS
Sbjct: 121 SAITRCRS 127

[Close]

BLAST of Lcy02g006820 vs. ExPASy TrEMBL
Match: A0A6J1C9N4 (protein RALF-like 33 OS=Momordica charantia OX=3673 GN=LOC111009595 PE=3 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 1.1e-47
Identity = 104/126 (82.54%), Postives = 111/126 (88.10%), Query Frame = 0


Query: 1   MGISRVSSLLAAVAILASHFLLISSAMPVDFSADHNLLFVPAKSECRGSIAECFLA--DS 60
           M ISRVSSLLAA AI A+H LL+SSA   DFS DH LL+VPAKSECRGSIAEC LA  DS
Sbjct: 1   MEISRVSSLLAAFAIFAAH-LLLSSATAADFSGDHKLLYVPAKSECRGSIAECLLAGDDS 60

Query: 61  AFGTEFEMDSEINRRILATTRYISYGALRRNNIPCSRRGASYYNCRPGAQANPYTRGCSA 120
            FGTEFEMDSEINRRILAT RYISYGAL+RN++PCSRRGASYYNC+PGAQANPY RGCSA
Sbjct: 61  GFGTEFEMDSEINRRILATMRYISYGALKRNSVPCSRRGASYYNCQPGAQANPYNRGCSA 120

Query: 121 ITRCRS 125
           ITRCRS
Sbjct: 121 ITRCRS 125

[Close]

BLAST of Lcy02g006820 vs. ExPASy TrEMBL
Match: A0A6J1KG89 (protein RALF-like 33 OS=Cucurbita maxima OX=3661 GN=LOC111494831 PE=3 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 9.9e-46
Identity = 101/128 (78.91%), Postives = 112/128 (87.50%), Query Frame = 0


Query: 1   MGISRVSSLLAAVAILASHFLLISSAMPVDFSADHNLLFVPAKSECRGSIAECFLA---- 60
           M ISRV S LAA AI+A+HFLL SSAM VDFS D  LLFVPA+S+CRGSIAECFLA    
Sbjct: 1   MEISRVFSFLAASAIIAAHFLL-SSAMVVDFSGDDKLLFVPAESKCRGSIAECFLAGDDN 60

Query: 61  DSAFGTEFEMDSEINRRILATTRYISYGALRRNNIPCSRRGASYYNCRPGAQANPYTRGC 120
           DSAFG EFEMDSEINRRILA +RY+SYGAL+RN++PCSRRGASYYNC+PGAQANPY RGC
Sbjct: 61  DSAFGMEFEMDSEINRRILAASRYLSYGALKRNSVPCSRRGASYYNCQPGAQANPYRRGC 120

Query: 121 SAITRCRS 125
           +AITRCRS
Sbjct: 121 NAITRCRS 127

[Close]

BLAST of Lcy02g006820 vs. ExPASy TrEMBL
Match: A0A6J1EV64 (protein RALF-like 33 OS=Cucurbita moschata OX=3662 GN=LOC111436882 PE=3 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 3.8e-45
Identity = 100/128 (78.12%), Postives = 112/128 (87.50%), Query Frame = 0


Query: 1   MGISRVSSLLAAVAILASHFLLISSAMPVDFSADHNLLFVPAKSECRGSIAECFLA---- 60
           M ISRV S LAA AI+A+HFLL SSAM VDFS    LLFVPA+S+CRGSIAECFLA    
Sbjct: 1   MEISRVFSFLAASAIIAAHFLL-SSAMAVDFSGGDKLLFVPAESKCRGSIAECFLAGDDN 60

Query: 61  DSAFGTEFEMDSEINRRILATTRYISYGALRRNNIPCSRRGASYYNCRPGAQANPYTRGC 120
           DSAFG EFEMDSEINRRILA++RY+SYGAL+RN++PCSRRGASYYNC+PGAQANPY RGC
Sbjct: 61  DSAFGMEFEMDSEINRRILASSRYLSYGALKRNSVPCSRRGASYYNCQPGAQANPYRRGC 120

Query: 121 SAITRCRS 125
           +AITRCRS
Sbjct: 121 NAITRCRS 127

[Close]

BLAST of Lcy02g006820 vs. NCBI nr
Match: XP_038875155.1 (protein RALF-like 33 [Benincasa hispida])

HSP 1 Score: 214.2 bits (544), Expect = 6.6e-52
Identity = 113/128 (88.28%), Postives = 116/128 (90.62%), Query Frame = 0


Query: 1   MGISRVSSLLAAVAILASHFLLISSAMPVDFSADHNLLFVPAKSECRGSIAECFLA---- 60
           MGISRVSSLLAAVAILA+HF LISSA  VDFS DH LLFVP KSECRGSIAECFLA    
Sbjct: 1   MGISRVSSLLAAVAILAAHF-LISSATAVDFSGDHKLLFVPTKSECRGSIAECFLAGNDD 60

Query: 61  DSAFGTEFEMDSEINRRILATTRYISYGALRRNNIPCSRRGASYYNCRPGAQANPYTRGC 120
           DSAFG EF MDSEINRRILATTRYISYGALRRNN+PCSRRGASYYNCRPGAQANPYTRGC
Sbjct: 61  DSAFGMEFVMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGC 120

Query: 121 SAITRCRS 125
           +AITRCRS
Sbjct: 121 NAITRCRS 127

[Close]

BLAST of Lcy02g006820 vs. NCBI nr
Match: XP_022959207.1 (protein RALF-like 33 [Cucurbita moschata])

HSP 1 Score: 206.1 bits (523), Expect = 1.8e-49
Identity = 104/128 (81.25%), Postives = 115/128 (89.84%), Query Frame = 0


Query: 1   MGISRVSSLLAAVAILASHFLLISSAMPVDFSADHNLLFVPAKSECRGSIAECFLA---- 60
           MGISRVS+L+AA A+LA+HFL++S+A  +DFS D+ +LF P KSECRGSIAECFLA    
Sbjct: 1   MGISRVSALIAAFAVLAAHFLILSAA-AIDFSGDNEILFAPTKSECRGSIAECFLAGNDD 60

Query: 61  DSAFGTEFEMDSEINRRILATTRYISYGALRRNNIPCSRRGASYYNCRPGAQANPYTRGC 120
           DS FG EFEMDSEINRRILATTRYISYGALRRNN+PCSRRGASYYNCRPGAQANPYTRGC
Sbjct: 61  DSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGC 120

Query: 121 SAITRCRS 125
           SAITRCRS
Sbjct: 121 SAITRCRS 127

[Close]

BLAST of Lcy02g006820 vs. NCBI nr
Match: KAG6575064.1 (Protein RALF-like 33, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 205.3 bits (521), Expect = 3.1e-49
Identity = 104/128 (81.25%), Postives = 114/128 (89.06%), Query Frame = 0


Query: 1   MGISRVSSLLAAVAILASHFLLISSAMPVDFSADHNLLFVPAKSECRGSIAECFLA---- 60
           MGISRVS+L+AA A+LA+HFL++ SA  +DFS D+ +LF P KSECRGSIAECFLA    
Sbjct: 1   MGISRVSALIAAFAVLAAHFLIL-SATAIDFSGDNEILFAPTKSECRGSIAECFLAGNDD 60

Query: 61  DSAFGTEFEMDSEINRRILATTRYISYGALRRNNIPCSRRGASYYNCRPGAQANPYTRGC 120
           DS FG EFEMDSEINRRILATTRYISYGALRRNN+PCSRRGASYYNCRPGAQANPYTRGC
Sbjct: 61  DSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGC 120

Query: 121 SAITRCRS 125
           SAITRCRS
Sbjct: 121 SAITRCRS 127

[Close]

BLAST of Lcy02g006820 vs. NCBI nr
Match: XP_023006467.1 (protein RALF-like 33 [Cucurbita maxima])

HSP 1 Score: 205.3 bits (521), Expect = 3.1e-49
Identity = 105/128 (82.03%), Postives = 113/128 (88.28%), Query Frame = 0


Query: 1   MGISRVSSLLAAVAILASHFLLISSAMPVDFSADHNLLFVPAKSECRGSIAECFLA---- 60
           MGISRVS+L+AA A+LA+HF LISSA  +DFS D+ +LF P KSECRGSI ECFLA    
Sbjct: 1   MGISRVSALIAAFAVLAAHF-LISSATAIDFSGDNEILFAPTKSECRGSITECFLAGNYD 60

Query: 61  DSAFGTEFEMDSEINRRILATTRYISYGALRRNNIPCSRRGASYYNCRPGAQANPYTRGC 120
           DS FG EFEMDSEINRRILATTRYISYGALRRNN+PCSRRGASYYNCRPGAQANPYTRGC
Sbjct: 61  DSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGC 120

Query: 121 SAITRCRS 125
           SAITRCRS
Sbjct: 121 SAITRCRS 127

[Close]

BLAST of Lcy02g006820 vs. NCBI nr
Match: XP_023547686.1 (protein RALF-like 33 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 205.3 bits (521), Expect = 3.1e-49
Identity = 105/128 (82.03%), Postives = 113/128 (88.28%), Query Frame = 0


Query: 1   MGISRVSSLLAAVAILASHFLLISSAMPVDFSADHNLLFVPAKSECRGSIAECFLA---- 60
           MGISRVS+L+AA  +LA+HF LISSA  +DFS D+ +LF P KSECRGSIAECFLA    
Sbjct: 1   MGISRVSALIAAFVVLAAHF-LISSATAIDFSGDNEILFAPTKSECRGSIAECFLAGNND 60

Query: 61  DSAFGTEFEMDSEINRRILATTRYISYGALRRNNIPCSRRGASYYNCRPGAQANPYTRGC 120
           DS FG EFEMDSEINRRILATTRYISYGALRRNN+PCSRRGASYYNCRPGAQANPYTRGC
Sbjct: 61  DSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGC 120

Query: 121 SAITRCRS 125
           SAITRCRS
Sbjct: 121 SAITRCRS 127

[Close]

BLAST of Lcy02g006820 vs. TAIR 10
Match: AT4G15800.1 (ralf-like 33 )

HSP 1 Score: 142.9 bits (359), Expect = 1.7e-34
Identity = 77/111 (69.37%), Postives = 86/111 (77.48%), Query Frame = 0


Query: 13  VAILASHFLLISSAMPVDFSADHNLLFVPAKSECRGSIAECFLADSAFGTEFEMDSEINR 72
           +AIL  HFL   +A+    S D    FVP +S+C G+IAEC L  S    EFEMDSEINR
Sbjct: 13  IAILTVHFLF--AAVTSQSSGD----FVPIESKCNGTIAECSL--STAEEEFEMDSEINR 72

Query: 73  RILATTRYISYGALRRNNIPCSRRGASYYNCRPGAQANPYTRGCSAITRCR 124
           RILATT+YISYGALRRN +PCSRRGASYYNCR GAQANPY+RGCSAITRCR
Sbjct: 73  RILATTKYISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAITRCR 115

[Close]

BLAST of Lcy02g006820 vs. TAIR 10
Match: AT3G16570.1 (rapid alkalinization factor 23 )

HSP 1 Score: 139.8 bits (351), Expect = 1.5e-33
Identity = 80/138 (57.97%), Postives = 94/138 (68.12%), Query Frame = 0


Query: 2   GISR---VSSLLAAVAILASH-FLLISSAMPVDFSADHNLLFVPAKSECRGSIAEC---- 61
           G+SR    +++ A + ILA H + +  S+   +F+ D    F P ++ECRG+IAEC    
Sbjct: 3   GLSRNSGAAAIFAILLILAVHNWSVAVSSQSTEFAGD----FPPFETECRGTIAECSVSA 62

Query: 62  --------FLADSAFGTEFEMDSEINRRILATTRYISYGALRRNNIPCSRRGASYYNCRP 121
                   F      G EFEMDSEINRRILAT RYISYGALRRN IPCSRRGASYYNCR 
Sbjct: 63  ALGDGGDLFYGGGEMGEEFEMDSEINRRILATRRYISYGALRRNTIPCSRRGASYYNCRR 122

Query: 122 GAQANPYTRGCSAITRCR 124
           GAQANPY+RGCSAITRCR
Sbjct: 123 GAQANPYSRGCSAITRCR 136

[Close]

BLAST of Lcy02g006820 vs. TAIR 10
Match: AT1G02900.1 (rapid alkalinization factor 1 )

HSP 1 Score: 119.8 bits (299), Expect = 1.6e-27
Identity = 59/81 (72.84%), Postives = 67/81 (82.72%), Query Frame = 0


Query: 44  SECRGSIAECFLADSAFGTEFEMDSEINRRILATTRYISYGALRRNNIPCSRRGASYYNC 103
           S C GSIAEC  A+     E EMDSEINRRILATT+YISY +L+RN++PCSRRGASYYNC
Sbjct: 45  SGCHGSIAECIGAE-----EEEMDSEINRRILATTKYISYQSLKRNSVPCSRRGASYYNC 104

Query: 104 RPGAQANPYTRGCSAITRCRS 125
           + GAQANPY+RGCS I RCRS
Sbjct: 105 QNGAQANPYSRGCSKIARCRS 120

[Close]

BLAST of Lcy02g006820 vs. TAIR 10
Match: AT3G05490.1 (ralf-like 22 )

HSP 1 Score: 115.9 bits (289), Expect = 2.3e-26
Identity = 66/126 (52.38%), Postives = 84/126 (66.67%), Query Frame = 0


Query: 3   ISRVSSLLAAVAILASHFLLISSAMPVDFSADHNLLFVPAKSE-----CRGSIAECFLAD 62
           ++   ++ A +AILA    ++ SA+        +L FV A S      C GSIAEC   +
Sbjct: 1   MTNTRAIYAVIAILA----IVISAVESTGDFGDSLDFVRAGSSSLFSGCTGSIAECIAEE 60

Query: 63  SAFGTEFEMDSEINRRILATTRYISYGALRRNNIPCSRRGASYYNCRPGAQANPYTRGCS 122
                E E DS+I+RRILA  +YISYGA+RRN++PCSRRGASYYNC+ GAQANPY+RGCS
Sbjct: 61  E----EMEFDSDISRRILAQKKYISYGAMRRNSVPCSRRGASYYNCQRGAQANPYSRGCS 118

Query: 123 AITRCR 124
            ITRCR
Sbjct: 121 TITRCR 118

[Close]

BLAST of Lcy02g006820 vs. TAIR 10
Match: AT2G33775.1 (ralf-like 19 )

HSP 1 Score: 87.0 bits (214), Expect = 1.1e-17
Identity = 41/61 (67.21%), Postives = 48/61 (78.69%), Query Frame = 0


Query: 63  EFEMDSEINRRILATTR-YISYGALRRNNIPCSRRGASYYNCRPGAQANPYTRGCSAITR 122
           ++ MDSE NRR LA  R YISYGALR+NN+PCSRRG SYY+C+   +ANPY RGCS IT 
Sbjct: 45  DYLMDSETNRRQLAARRSYISYGALRKNNVPCSRRGRSYYDCKKRKRANPYRRGCSVITH 104

The following BLAST results are available for this feature:

BLAST of Lcy02g006820 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L9P8	2.4e-33	69.37	Protein RALF-like 33 OS=Arabidopsis thaliana OX=3702 GN=RALFL33 PE=2 SV=1	[more]
Q9LUS7	2.1e-32	57.97	Rapid alkalinization factor 23 OS=Arabidopsis thaliana OX=3702 GN=RALF23 PE=1 SV...	[more]
Q945T0	1.1e-28	70.11	Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1	[more]
Q9SRY3	2.2e-26	72.84	Protein RALF-like 1 OS=Arabidopsis thaliana OX=3702 GN=RALF1 PE=1 SV=1	[more]
Q9MA62	3.2e-25	52.38	Protein RALF-like 22 OS=Arabidopsis thaliana OX=3702 GN=RALFL22 PE=3 SV=1	[more]

BLAST of Lcy02g006820 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H3W7	8.7e-50	81.25	protein RALF-like 33 OS=Cucurbita moschata OX=3662 GN=LOC111460267 PE=3 SV=1	[more]
A0A6J1KVY0	1.5e-49	82.03	protein RALF-like 33 OS=Cucurbita maxima OX=3661 GN=LOC111499183 PE=3 SV=1	[more]
A0A6J1C9N4	1.1e-47	82.54	protein RALF-like 33 OS=Momordica charantia OX=3673 GN=LOC111009595 PE=3 SV=1	[more]
A0A6J1KG89	9.9e-46	78.91	protein RALF-like 33 OS=Cucurbita maxima OX=3661 GN=LOC111494831 PE=3 SV=1	[more]
A0A6J1EV64	3.8e-45	78.13	protein RALF-like 33 OS=Cucurbita moschata OX=3662 GN=LOC111436882 PE=3 SV=1	[more]

BLAST of Lcy02g006820 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875155.1	6.6e-52	88.28	protein RALF-like 33 [Benincasa hispida]	[more]
XP_022959207.1	1.8e-49	81.25	protein RALF-like 33 [Cucurbita moschata]	[more]
KAG6575064.1	3.1e-49	81.25	Protein RALF-like 33, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023006467.1	3.1e-49	82.03	protein RALF-like 33 [Cucurbita maxima]	[more]
XP_023547686.1	3.1e-49	82.03	protein RALF-like 33 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lcy02g006820 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G15800.1	1.7e-34	69.37	ralf-like 33	[more]
AT3G16570.1	1.5e-33	57.97	rapid alkalinization factor 23	[more]
AT1G02900.1	1.6e-27	72.84	rapid alkalinization factor 1	[more]
AT3G05490.1	2.3e-26	52.38	ralf-like 22	[more]
AT2G33775.1	1.1e-17	67.21	ralf-like 19	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008801	Rapid ALkalinization Factor	PFAM	PF05498	RALF	coord: 63..123 e-value: 1.8E-30 score: 105.7
None	No IPR available	PANTHER	PTHR33136:SF50	PROTEIN RALF-LIKE 33	coord: 9..124
None	No IPR available	PANTHER	PTHR33136	RAPID ALKALINIZATION FACTOR-LIKE	coord: 9..124

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy02g006820.1	Lcy02g006820.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019722	calcium-mediated signaling
cellular_component	GO:0005576	extracellular region