Lcy02g006770 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy02g006770
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	transcription factor bHLH87-like
Location	Chr02: 9124328 .. 9126093 (-)
RNA-Seq Expression	Lcy02g006770
Synteny	Lcy02g006770

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGATTTGCTTTGGAATGGCTCATGGAGCACCGGCGAAGACGACGGTTCCGAAGAAAGCTTATTCTCCTCGGACGACCCGAGTCGTTGTTCGAGCCCACCATTACGAGAGCTTCAAACAGTTGCAAGAATATTGGGGTTGCCGGAGATCGAAACTCCGGCACCGGCAGTGGAATTGGCTATGGATCCCAAGTCATGGCCGGCGGGAGCTAGCTCCGGTGGAGTTTTGTTGGAAGAGCTTGAAAATGACAAAGGTTTGAACTTGTAAACTTGTTCACATTTGAATCTTATCCCATCTTTTTTTCCTCTTTTTCTTTTTTTTTTTTTTCTTTTTTGGTTGGGACATCTTGCTTTAATTAAGAAGAAAATATTGGGACATTCACACTTCAATTAAAACACATTTTTGTTTTCTTGTACTTCAAGTGTTCATACTTTGAAGCATGTGGACATAATTTTGAAAATCTCGTATTAATTCGAATTTAGTATTTAGTTAGTTTATATATGTATATACTTTTTAAGGTTTTTATTAGATTATATTTGATTTTAAATTGTTGAAGATTCACACTACGTACATTCATTTTGTATGGGTTCATCATTATTCATGTTATCAAAAAAAAAAAAAAAAGTTTCATGCATAAAATTGCTTTTTTATGAGATTAAAAAAAAAAAAAAAAGGAAATGCTTGACAACAAATAACTTAATTGTTAATTTATATAAAAGAAAGAAAAATAAACCAATCTAAACATAATTTAACTCCAAGCTAATAACCTTGGTAAAGGTTCGAGGTTTGGATTTCTATTTTTTTTTTTAAGCTTTCTATGTACTATTTAAAATAACTAACATATTGTAGTACTAAGCATATCAAAATACAATGTGATTCTTTTTAATTTTTTTTTAGTTGAATTAGATGTGGGGTTAGGTGATTCAAACGTCTAATTTCTTTGATCGAGGTTATAATATCTTAATCAATTGATCAGTTATAACCAGATTGATATATATTTATTTTTAAGCATAAAATAAAATATAATTGAAGTTTATAACTATCTTGAACATTTATCATATTATCATTTGTAATTTTTCTTTTGACGTGGATGTGATGGATCATCTGTTTTGATTATAAATTAGAAATTGCACCATGCAATATTAGATTTATATTATTATACCATGCAAATAATAACCCACAAGGGATTTTGCTATGTAGGAATTGCACCAGAGGGTGGATCTTGGGACATTTTTGAGAACCAACAACCAAAACAACAAAATCCCATAACACAAAAACAACCAAGCTCAGCCAAAAACAATGATCACTTCCAACACTCTACAACTTCGTCTCCATCACCATCGTCTTCGAACAACGACGAGTCTGAGCCTGTTGTTCGGGAGGTCGTGTCACAAATGAAGGAATTGATATATCACGCGGCGGTGTTTAGGCCGGTGAACTTAGGGTTGGAGACGGTGGAGAAGAAGACGAGGAGGAACGTGAAGACGTCGAAGGAGCCACAAACGGTGGCGGCGAGAAAACGGAGGGAGAAGATAAGTGAAAAAATTAGGGTTTTGCAGAGGTTGGTTCCTGGTGGGAACAAAATGGACACTGCCTCCATGCTCGATGAGGCTGCAAGCTACCTCAAGTTTCTTAGGGCACAAATCAAAGCACTAGAGGGTTTAAGCTACAAAGTTGGCAATGTTGATTGTCTCTCAACTTGCAACTCTTTTTCTTTCAACTCCACTATATTTCCCACAAATAATGCTTATTTTCCTCTCTAA

mRNA sequence

ATGGATGATTTGCTTTGGAATGGCTCATGGAGCACCGGCGAAGACGACGGTTCCGAAGAAAGCTTATTCTCCTCGGACGACCCGAGTCGTTGTTCGAGCCCACCATTACGAGAGCTTCAAACAGTTGCAAGAATATTGGGGTTGCCGGAGATCGAAACTCCGGCACCGGCAGTGGAATTGGCTATGGATCCCAAGTCATGGCCGGCGGGAGCTAGCTCCGGTGGAGTTTTGTTGGAAGAGCTTGAAAATGACAAAGGAATTGCACCAGAGGGTGGATCTTGGGACATTTTTGAGAACCAACAACCAAAACAACAAAATCCCATAACACAAAAACAACCAAGCTCAGCCAAAAACAATGATCACTTCCAACACTCTACAACTTCGTCTCCATCACCATCGTCTTCGAACAACGACGAGTCTGAGCCTGTTGTTCGGGAGGTCGTGTCACAAATGAAGGAATTGATATATCACGCGGCGGTGTTTAGGCCGGTGAACTTAGGGTTGGAGACGGTGGAGAAGAAGACGAGGAGGAACGTGAAGACGTCGAAGGAGCCACAAACGGTGGCGGCGAGAAAACGGAGGGAGAAGATAAGTGAAAAAATTAGGGTTTTGCAGAGGTTGGTTCCTGGTGGGAACAAAATGGACACTGCCTCCATGCTCGATGAGGCTGCAAGCTACCTCAAGTTTCTTAGGGCACAAATCAAAGCACTAGAGGGTTTAAGCTACAAAGTTGGCAATGTTGATTGTCTCTCAACTTGCAACTCTTTTTCTTTCAACTCCACTATATTTCCCACAAATAATGCTTATTTTCCTCTCTAA

Coding sequence (CDS)

ATGGATGATTTGCTTTGGAATGGCTCATGGAGCACCGGCGAAGACGACGGTTCCGAAGAAAGCTTATTCTCCTCGGACGACCCGAGTCGTTGTTCGAGCCCACCATTACGAGAGCTTCAAACAGTTGCAAGAATATTGGGGTTGCCGGAGATCGAAACTCCGGCACCGGCAGTGGAATTGGCTATGGATCCCAAGTCATGGCCGGCGGGAGCTAGCTCCGGTGGAGTTTTGTTGGAAGAGCTTGAAAATGACAAAGGAATTGCACCAGAGGGTGGATCTTGGGACATTTTTGAGAACCAACAACCAAAACAACAAAATCCCATAACACAAAAACAACCAAGCTCAGCCAAAAACAATGATCACTTCCAACACTCTACAACTTCGTCTCCATCACCATCGTCTTCGAACAACGACGAGTCTGAGCCTGTTGTTCGGGAGGTCGTGTCACAAATGAAGGAATTGATATATCACGCGGCGGTGTTTAGGCCGGTGAACTTAGGGTTGGAGACGGTGGAGAAGAAGACGAGGAGGAACGTGAAGACGTCGAAGGAGCCACAAACGGTGGCGGCGAGAAAACGGAGGGAGAAGATAAGTGAAAAAATTAGGGTTTTGCAGAGGTTGGTTCCTGGTGGGAACAAAATGGACACTGCCTCCATGCTCGATGAGGCTGCAAGCTACCTCAAGTTTCTTAGGGCACAAATCAAAGCACTAGAGGGTTTAAGCTACAAAGTTGGCAATGTTGATTGTCTCTCAACTTGCAACTCTTTTTCTTTCAACTCCACTATATTTCCCACAAATAATGCTTATTTTCCTCTCTAA

Protein sequence

MDDLLWNGSWSTGEDDGSEESLFSSDDPSRCSSPPLRELQTVARILGLPEIETPAPAVELAMDPKSWPAGASSGGVLLEELENDKGIAPEGGSWDIFENQQPKQQNPITQKQPSSAKNNDHFQHSTTSSPSPSSSNNDESEPVVREVVSQMKELIYHAAVFRPVNLGLETVEKKTRRNVKTSKEPQTVAARKRREKISEKIRVLQRLVPGGNKMDTASMLDEAASYLKFLRAQIKALEGLSYKVGNVDCLSTCNSFSFNSTIFPTNNAYFPL

Homology

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BLAST of Lcy02g006770 vs. ExPASy Swiss-Prot
Match: Q8S3D2 (Transcription factor bHLH87 OS=Arabidopsis thaliana OX=3702 GN=BHLH87 PE=1 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 1.8e-36
Identity = 101/184 (54.89%), Postives = 122/184 (66.30%), Query Frame = 0


Query: 90  EGGSWDIFENQQPKQQNPITQKQPSSAKNNDHFQHSTTSSPSPSSSNNDESEPVVREVVS 149
           +GG   I++  Q K + P T+K+     +N  FQHST  S        D  EP   E ++
Sbjct: 194 KGGFKLIYDENQSKSKKPRTEKE-RGGSSNISFQHSTCLS--------DNVEPDA-EAIA 253

Query: 150 QMKELIYHAAVFRPVNLGLETVEKKTRRNVKTSKEPQTVAARKRREKISEKIRVLQRLVP 209
           QMKE+IY AA FRPVN GLE VEK  R+NVK S +PQTVAAR+RRE+ISEKIRVLQ LVP
Sbjct: 254 QMKEMIYRAAAFRPVNFGLEIVEKPKRKNVKISTDPQTVAARQRRERISEKIRVLQTLVP 313

Query: 210 GGNKMDTASMLDEAASYLKFLRAQIKALEGLSYKVGNVDCLSTCNSFSFNSTIFPT-NNA 269
           GG KMDTASMLDEAA+YLKFLRAQ+KALE L  K+   +      SFS   T FP  + +
Sbjct: 314 GGTKMDTASMLDEAANYLKFLRAQVKALENLRPKLDQTNL-----SFSSAPTSFPLFHPS 362

Query: 270 YFPL 273
           + PL
Sbjct: 374 FLPL 362

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BLAST of Lcy02g006770 vs. ExPASy Swiss-Prot
Match: A0A0P0WQ90 (Transcription factor LATE FLOWERING OS=Oryza sativa subsp. japonica OX=39947 GN=LF PE=1 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.2e-24
Identity = 68/141 (48.23%), Postives = 92/141 (65.25%), Query Frame = 0


Query: 146 EVVSQMKELIYHAAVFRPVNLG------------LETVEKKTRRNVKTSKEPQTVAARKR 205
           E ++Q+KE+IY AA  RPV LG                ++  R+NV+ S +PQTVAAR R
Sbjct: 256 EAIAQVKEMIYRAAAMRPVTLGGPASASDPSSRPPPPPQRPRRKNVRISSDPQTVAARLR 315

Query: 206 REKISEKIRVLQRLVPGGNKMDTASMLDEAASYLKFLRAQIKALEGL------------S 263
           RE++SE++RVLQRLVPGG+KMDTA+MLDEAASYLKFL++Q++ALE L             
Sbjct: 316 RERVSERLRVLQRLVPGGSKMDTATMLDEAASYLKFLKSQLEALETLGNGNGNGNLLHHG 375

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BLAST of Lcy02g006770 vs. ExPASy Swiss-Prot
Match: Q9SND4 (Transcription factor HEC2 OS=Arabidopsis thaliana OX=3702 GN=HEC2 PE=1 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 1.9e-22
Identity = 59/111 (53.15%), Postives = 85/111 (76.58%), Query Frame = 0


Query: 129 SPSPSSSNNDESEPVVREV-VSQMKELIYHAAVFRPVNLGLETVEKKTRRNVKTSKEPQT 188
           +PSPSSS  ++         ++ M+E+I+  AV +P+++  E+V+   R+NV+ SK+PQ+
Sbjct: 72  APSPSSSLPEKRGGCSDNANMAAMREMIFRIAVMQPIHIDPESVKPPKRKNVRISKDPQS 131

Query: 189 VAARKRREKISEKIRVLQRLVPGGNKMDTASMLDEAASYLKFLRAQIKALE 239
           VAAR RRE+ISE+IR+LQRLVPGG KMDTASMLDEA  Y+KFL+ Q+++LE
Sbjct: 132 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSLE 182

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BLAST of Lcy02g006770 vs. ExPASy Swiss-Prot
Match: Q9LXD8 (Transcription factor HEC3 OS=Arabidopsis thaliana OX=3702 GN=HEC3 PE=1 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 4.2e-22
Identity = 61/113 (53.98%), Postives = 80/113 (70.80%), Query Frame = 0


Query: 125 STTSSPSPSSSNNDESEPVVREVVSQMKELIYHAAVFRPVNLGLETVEKKTRRNVKTSKE 184
           +TT        + DE EP+  E +  MKE++Y  A  + V++   TV+K  RRNV+ S +
Sbjct: 71  TTTLLSGDQEDDEDEEEPL--EELGAMKEMMYKIAAMQSVDIDPATVKKPKRRNVRISDD 130

Query: 185 PQTVAARKRREKISEKIRVLQRLVPGGNKMDTASMLDEAASYLKFLRAQIKAL 238
           PQ+VAAR RRE+ISE+IR+LQRLVPGG KMDTASMLDEA  Y+KFL+ QI+ L
Sbjct: 131 PQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 181

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BLAST of Lcy02g006770 vs. ExPASy Swiss-Prot
Match: Q9FHA7 (Transcription factor HEC1 OS=Arabidopsis thaliana OX=3702 GN=HEC1 PE=1 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 7.2e-22
Identity = 61/126 (48.41%), Postives = 88/126 (69.84%), Query Frame = 0


Query: 113 PSSAKNNDHFQHSTTSSPSPSSSNNDESEPVVREVVSQMKELIYHAAVFRPVNLGLETVE 172
           PSS   N  +        + S++NN+ +       ++ M+E+I+  AV +P+++  E V+
Sbjct: 66  PSSISPNTAYSSVFLDKRNNSNNNNNGTN------MAAMREMIFRIAVMQPIHIDPEAVK 125

Query: 173 KKTRRNVKTSKEPQTVAARKRREKISEKIRVLQRLVPGGNKMDTASMLDEAASYLKFLRA 232
              RRNV+ SK+PQ+VAAR RRE+ISE+IR+LQRLVPGG KMDTASMLDEA  Y+KFL+ 
Sbjct: 126 PPKRRNVRISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKK 185

Query: 233 QIKALE 239
           Q+++LE
Sbjct: 186 QVQSLE 185

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BLAST of Lcy02g006770 vs. ExPASy TrEMBL
Match: A0A6J1D4K8 (transcription factor bHLH87-like OS=Momordica charantia OX=3673 GN=LOC111016961 PE=4 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 5.5e-97
Identity = 212/291 (72.85%), Postives = 236/291 (81.10%), Query Frame = 0


Query: 1   MDDLLWNGSWSTGEDD-GSEESLFSSDDPSRCSSPPLRELQTVARILGLPEIET------ 60
           MDDLLWNGSWS G DD G EE+LF S DPS CSSPPL+ELQTVA ILGLPEI T      
Sbjct: 1   MDDLLWNGSWSGGGDDXGCEENLFIS-DPSCCSSPPLKELQTVAEILGLPEINTSASDMG 60

Query: 61  ------PAPAVELAM---DPKSWPAGASSGGVLLEELENDKG-IAPEGGSWDIFENQQPK 120
                 PA  V+L +      SWPAGASSGG+LLEELENDKG  APE GSWDIFEN +PK
Sbjct: 61  SMALRKPAGVVDLKLLCDRGNSWPAGASSGGLLLEELENDKGRTAPESGSWDIFENPKPK 120

Query: 121 QQNPITQKQPSSAKNNDHFQHSTTSSPSPSSSNNDESEPVVREV-VSQMKELIYHAAVFR 180
           QQNPI++KQPSSA N + FQ  + SSPSPSSSNN++ EP  RE  +++MK ++YHAA FR
Sbjct: 121 QQNPISEKQPSSA-NYNGFQQPSNSSPSPSSSNNNDVEPAGREAGMARMKAMMYHAAAFR 180

Query: 181 PVNLGLETVEKKTRRNVKTSKEPQTVAARKRREKISEKIRVLQRLVPGGNKMDTASMLDE 240
           PVNLGLETVEKK RRNVKTSKEPQTVAARKRREKISEKIRVLQRLVPGG+KMDTASMLDE
Sbjct: 181 PVNLGLETVEKKRRRNVKTSKEPQTVAARKRREKISEKIRVLQRLVPGGSKMDTASMLDE 240

Query: 241 AASYLKFLRAQIKALEGLSYKVGNVDCLSTCNSFSFNST-IFPTNNAYFPL 273
           AASYLKFLR Q+KA+E LSYK+G++DCLS C SFSFNST  FPT +AYFPL
Sbjct: 241 AASYLKFLREQVKAMEDLSYKLGSLDCLSNCTSFSFNSTSAFPT-SAYFPL 288

[Close]

BLAST of Lcy02g006770 vs. ExPASy TrEMBL
Match: A0A0A0LDH7 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G850530 PE=4 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 1.9e-86
Identity = 194/278 (69.78%), Postives = 214/278 (76.98%), Query Frame = 0


Query: 1   MDDLLWNGSWSTGEDDGSEESLFSSDDPSRCSSPPLRELQTVARILGLPEIETPAPAV-- 60
           MDDLLWN SWS  E+ GSEESLF SDDPSRCSSPPL+ELQTVARILGLPEI+T       
Sbjct: 1   MDDLLWNSSWSNEENSGSEESLFVSDDPSRCSSPPLQELQTVARILGLPEIDTSTRETRV 60

Query: 61  -ELAMD-------PKSWPAGASSGGVLLEELENDKGIAPEGGSWDIFENQQPKQQNPITQ 120
            +LA D        KSWP   ++GGVL E LENDKGIA +GG  DI ENQ+P QQN I +
Sbjct: 61  GKLAEDSKVLFECEKSWPMEVTTGGVLFEVLENDKGIASKGGFLDILENQKPNQQNTIIE 120

Query: 121 KQPSSAKNNDHFQHSTTSSPSPSSSNNDESEPVV--REVVSQMKELIYHAAVFRPVNLGL 180
            QPSS  +      + + SPSPSSSN +E E  V   +VVSQMKE IY+AAVFRPVNLGL
Sbjct: 121 NQPSSTNST-----TLSPSPSPSSSNIEEIEQAVDRDQVVSQMKEWIYYAAVFRPVNLGL 180

Query: 181 ETVEKKTRRNVKTSKEPQTVAARKRREKISEKIRVLQRLVPGGNKMDTASMLDEAASYLK 240
           ETVEKK R+NVK SKEPQTVAARKRREKISEKIRVLQRLVPGG+KMD  SMLDEAASYLK
Sbjct: 181 ETVEKKRRKNVKMSKEPQTVAARKRREKISEKIRVLQRLVPGGSKMDIGSMLDEAASYLK 240

Query: 241 FLRAQIKALEGLSYKVGNVDCLSTCNSFSFNSTIFPTN 267
           FLRAQIKALEGL+YK G++DCLSTC     NST FPTN
Sbjct: 241 FLRAQIKALEGLTYKFGSIDCLSTCT--PLNST-FPTN 270

[Close]

BLAST of Lcy02g006770 vs. ExPASy TrEMBL
Match: A0A5D3BVP3 (Transcription factor bHLH87-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold863G001900 PE=4 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 2.1e-85
Identity = 192/279 (68.82%), Postives = 216/279 (77.42%), Query Frame = 0


Query: 1   MDDLLWNGSWSTGEDDGSEESLFSSDDPSRCSSPPLRELQTVARILGLPEIETPAPAV-- 60
           M+DLLWN SWS  ED GSEESLF SD P RCSSPPL+ELQTVARILGLPEI+T  P +  
Sbjct: 1   MEDLLWNSSWSNEEDSGSEESLFVSDVPGRCSSPPLQELQTVARILGLPEIDTRTPEIRV 60

Query: 61  -ELAMD------PKSWPAGASSGGVLLEELENDKGIAPEGGSWDIFENQQPKQQNPITQK 120
            +LA D       KS P   ++GGVL E LEND+GIAP+GG  DIFENQ+  QQNPI +K
Sbjct: 61  EKLAKDSNVFEREKSCPVEVTTGGVLFEVLENDQGIAPKGGFLDIFENQKLSQQNPIIEK 120

Query: 121 QPSSAKNNDHFQHSTTSSPSPSSSNN--DESEPVVRE--VVSQMKELIYHAAVFRPVNLG 180
            PSS        +STT SPSPSSS++  +E E VV +   VSQMK+ IY+AAVF+PVNLG
Sbjct: 121 LPSST-------NSTTPSPSPSSSSSYIEEIEQVVDQDRFVSQMKQWIYYAAVFKPVNLG 180

Query: 181 LETVEKKTRRNVKTSKEPQTVAARKRREKISEKIRVLQRLVPGGNKMDTASMLDEAASYL 240
           LETVEKK RRNVK SKEPQTVAARKRREKISEKIRVL+RLVPGG+KMD ASMLDEAASYL
Sbjct: 181 LETVEKKRRRNVKVSKEPQTVAARKRREKISEKIRVLRRLVPGGSKMDIASMLDEAASYL 240

Query: 241 KFLRAQIKALEGLSYKVGNVDCLSTCNSFSFNSTIFPTN 267
           KFLRAQIKALEGL+YK G+ DCLSTC  F   +  FPTN
Sbjct: 241 KFLRAQIKALEGLNYKFGSTDCLSTCTPF---NPTFPTN 269

[Close]

BLAST of Lcy02g006770 vs. ExPASy TrEMBL
Match: A0A1S3BIP2 (transcription factor bHLH87-like OS=Cucumis melo OX=3656 GN=LOC103489996 PE=4 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 2.1e-85
Identity = 192/279 (68.82%), Postives = 216/279 (77.42%), Query Frame = 0


Query: 1   MDDLLWNGSWSTGEDDGSEESLFSSDDPSRCSSPPLRELQTVARILGLPEIETPAPAV-- 60
           M+DLLWN SWS  ED GSEESLF SD P RCSSPPL+ELQTVARILGLPEI+T  P +  
Sbjct: 1   MEDLLWNSSWSNEEDSGSEESLFVSDVPGRCSSPPLQELQTVARILGLPEIDTRTPEIRV 60

Query: 61  -ELAMD------PKSWPAGASSGGVLLEELENDKGIAPEGGSWDIFENQQPKQQNPITQK 120
            +LA D       KS P   ++GGVL E LEND+GIAP+GG  DIFENQ+  QQNPI +K
Sbjct: 61  EKLAKDSNVFEREKSCPVEVTTGGVLFEVLENDQGIAPKGGFLDIFENQKLSQQNPIIEK 120

Query: 121 QPSSAKNNDHFQHSTTSSPSPSSSNN--DESEPVVRE--VVSQMKELIYHAAVFRPVNLG 180
            PSS        +STT SPSPSSS++  +E E VV +   VSQMK+ IY+AAVF+PVNLG
Sbjct: 121 LPSST-------NSTTPSPSPSSSSSYIEEIEQVVDQDRFVSQMKQWIYYAAVFKPVNLG 180

Query: 181 LETVEKKTRRNVKTSKEPQTVAARKRREKISEKIRVLQRLVPGGNKMDTASMLDEAASYL 240
           LETVEKK RRNVK SKEPQTVAARKRREKISEKIRVL+RLVPGG+KMD ASMLDEAASYL
Sbjct: 181 LETVEKKRRRNVKVSKEPQTVAARKRREKISEKIRVLRRLVPGGSKMDIASMLDEAASYL 240

Query: 241 KFLRAQIKALEGLSYKVGNVDCLSTCNSFSFNSTIFPTN 267
           KFLRAQIKALEGL+YK G+ DCLSTC  F   +  FPTN
Sbjct: 241 KFLRAQIKALEGLNYKFGSTDCLSTCTPF---NPTFPTN 269

[Close]

BLAST of Lcy02g006770 vs. ExPASy TrEMBL
Match: A0A6J1GAJ8 (transcription factor bHLH87-like OS=Cucurbita moschata OX=3662 GN=LOC111452426 PE=4 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 4.6e-80
Identity = 184/275 (66.91%), Postives = 200/275 (72.73%), Query Frame = 0


Query: 1   MDDLLWNGSWSTGEDDGSEESLFSSDDPSRCSSPPLRELQTVARILGLPEIETPAP---A 60
           MDDLLWNGSW+ GEDDG +ESL  SD  SRCSSPPL+ELQTVARILGL EIETP P   A
Sbjct: 1   MDDLLWNGSWNNGEDDGGKESLLFSDGSSRCSSPPLQELQTVARILGLSEIETPTPEMRA 60

Query: 61  VELAMDPKSWPAGASSGGVLLEELENDKGIAPEGGSWDIFENQQPKQQNPITQKQPSSAK 120
           VELA+DPKSWPAGASSGG+LLEELENDKGI                              
Sbjct: 61  VELAVDPKSWPAGASSGGLLLEELENDKGI------------------------------ 120

Query: 121 NNDHFQHSTTSSPSPSSSNNDESEPVVR-EVVSQMKELIYHAAVFRPVNLGLETVEKKTR 180
                        SPSSSNN E+    R +++S+MKE+IYHAAVFRPVNLG+ETVEKK R
Sbjct: 121 -----------GVSPSSSNNYETASSDRDQIMSRMKEMIYHAAVFRPVNLGIETVEKKRR 180

Query: 181 RNVKTSKEPQTVAARKRREKISEKIRVLQRLVPGGNKMDTASMLDEAASYLKFLRAQIKA 240
           RNVK SKEPQTVAARKRREKISEKIRVLQRLVPGG+KMDTASMLDEAASYLKFLRAQIKA
Sbjct: 181 RNVKMSKEPQTVAARKRREKISEKIRVLQRLVPGGSKMDTASMLDEAASYLKFLRAQIKA 226

Query: 241 LEGLSYKVGNVDCLSTCNSFSFNSTIFPTNNAYFP 272
           LEG  YK+G     S+C   SFN T FP +NAYFP
Sbjct: 241 LEGNGYKLG-----SSCT--SFNPTSFP-SNAYFP 226

[Close]

BLAST of Lcy02g006770 vs. NCBI nr
Match: XP_022148257.1 (transcription factor bHLH87-like [Momordica charantia])

HSP 1 Score: 364.0 bits (933), Expect = 1.1e-96
Identity = 212/291 (72.85%), Postives = 236/291 (81.10%), Query Frame = 0


Query: 1   MDDLLWNGSWSTGEDD-GSEESLFSSDDPSRCSSPPLRELQTVARILGLPEIET------ 60
           MDDLLWNGSWS G DD G EE+LF S DPS CSSPPL+ELQTVA ILGLPEI T      
Sbjct: 1   MDDLLWNGSWSGGGDDXGCEENLFIS-DPSCCSSPPLKELQTVAEILGLPEINTSASDMG 60

Query: 61  ------PAPAVELAM---DPKSWPAGASSGGVLLEELENDKG-IAPEGGSWDIFENQQPK 120
                 PA  V+L +      SWPAGASSGG+LLEELENDKG  APE GSWDIFEN +PK
Sbjct: 61  SMALRKPAGVVDLKLLCDRGNSWPAGASSGGLLLEELENDKGRTAPESGSWDIFENPKPK 120

Query: 121 QQNPITQKQPSSAKNNDHFQHSTTSSPSPSSSNNDESEPVVREV-VSQMKELIYHAAVFR 180
           QQNPI++KQPSSA N + FQ  + SSPSPSSSNN++ EP  RE  +++MK ++YHAA FR
Sbjct: 121 QQNPISEKQPSSA-NYNGFQQPSNSSPSPSSSNNNDVEPAGREAGMARMKAMMYHAAAFR 180

Query: 181 PVNLGLETVEKKTRRNVKTSKEPQTVAARKRREKISEKIRVLQRLVPGGNKMDTASMLDE 240
           PVNLGLETVEKK RRNVKTSKEPQTVAARKRREKISEKIRVLQRLVPGG+KMDTASMLDE
Sbjct: 181 PVNLGLETVEKKRRRNVKTSKEPQTVAARKRREKISEKIRVLQRLVPGGSKMDTASMLDE 240

Query: 241 AASYLKFLRAQIKALEGLSYKVGNVDCLSTCNSFSFNST-IFPTNNAYFPL 273
           AASYLKFLR Q+KA+E LSYK+G++DCLS C SFSFNST  FPT +AYFPL
Sbjct: 241 AASYLKFLREQVKAMEDLSYKLGSLDCLSNCTSFSFNSTSAFPT-SAYFPL 288

[Close]

BLAST of Lcy02g006770 vs. NCBI nr
Match: XP_038902463.1 (transcription factor bHLH87-like [Benincasa hispida])

HSP 1 Score: 345.9 bits (886), Expect = 3.2e-91
Identity = 200/271 (73.80%), Postives = 220/271 (81.18%), Query Frame = 0


Query: 1   MDDLLWNGSWSTGEDDGSEESLFSSDDPSRCSSPPLRELQTVARILGLPEIETPAPAV-- 60
           MDDLLWNGSWS  ED   EESLF S+DPSRCSSPPL+ELQTVARILGL EI TPAP +  
Sbjct: 1   MDDLLWNGSWSIEEDRNCEESLFVSNDPSRCSSPPLQELQTVARILGLSEINTPAPEMKV 60

Query: 61  -ELAMD-------PKSWPAGASSGGVLLEELENDKGIAPEGGSWDIFENQQPKQQNPITQ 120
            +LA D        KSWP GASSGGVL +E+ENDKG AP+GG  DIFENQ+PKQQN I +
Sbjct: 61  EKLAKDSKVLFEREKSWPVGASSGGVLFDEVENDKGSAPQGGFLDIFENQKPKQQNSIIE 120

Query: 121 KQPSSAKNNDHFQHSTTSSPSPSSSNNDESE-PVVR-EVVSQMKELIYHAAVFRPVNLGL 180
           KQPSSA +      + + SPSPSSSNNDE E PV R ++VSQMKE IY+AAVFRPVNLG 
Sbjct: 121 KQPSSANS-----INPSLSPSPSSSNNDEVERPVDRDQLVSQMKECIYYAAVFRPVNLGS 180

Query: 181 ETVEKKTRRNVKTSKEPQTVAARKRREKISEKIRVLQRLVPGGNKMDTASMLDEAASYLK 240
           ETVEKK RRNVK SKEPQT+AAR RREKISEKIRVLQ LVPGGNKMD ASMLDEAASYLK
Sbjct: 181 ETVEKKRRRNVKMSKEPQTIAARIRREKISEKIRVLQSLVPGGNKMDIASMLDEAASYLK 240

Query: 241 FLRAQIKALEGLSYKVGNVDCLSTCNSFSFN 260
           FLRAQIKALEGLSYK+G++DCLST  SF+ N
Sbjct: 241 FLRAQIKALEGLSYKLGSIDCLSTSTSFNPN 266

[Close]

BLAST of Lcy02g006770 vs. NCBI nr
Match: XP_004146860.1 (transcription factor bHLH87 [Cucumis sativus] >KGN59848.1 hypothetical protein Csa_001182 [Cucumis sativus])

HSP 1 Score: 328.9 bits (842), Expect = 4.0e-86
Identity = 194/278 (69.78%), Postives = 214/278 (76.98%), Query Frame = 0


Query: 1   MDDLLWNGSWSTGEDDGSEESLFSSDDPSRCSSPPLRELQTVARILGLPEIETPAPAV-- 60
           MDDLLWN SWS  E+ GSEESLF SDDPSRCSSPPL+ELQTVARILGLPEI+T       
Sbjct: 1   MDDLLWNSSWSNEENSGSEESLFVSDDPSRCSSPPLQELQTVARILGLPEIDTSTRETRV 60

Query: 61  -ELAMD-------PKSWPAGASSGGVLLEELENDKGIAPEGGSWDIFENQQPKQQNPITQ 120
            +LA D        KSWP   ++GGVL E LENDKGIA +GG  DI ENQ+P QQN I +
Sbjct: 61  GKLAEDSKVLFECEKSWPMEVTTGGVLFEVLENDKGIASKGGFLDILENQKPNQQNTIIE 120

Query: 121 KQPSSAKNNDHFQHSTTSSPSPSSSNNDESEPVV--REVVSQMKELIYHAAVFRPVNLGL 180
            QPSS  +      + + SPSPSSSN +E E  V   +VVSQMKE IY+AAVFRPVNLGL
Sbjct: 121 NQPSSTNST-----TLSPSPSPSSSNIEEIEQAVDRDQVVSQMKEWIYYAAVFRPVNLGL 180

Query: 181 ETVEKKTRRNVKTSKEPQTVAARKRREKISEKIRVLQRLVPGGNKMDTASMLDEAASYLK 240
           ETVEKK R+NVK SKEPQTVAARKRREKISEKIRVLQRLVPGG+KMD  SMLDEAASYLK
Sbjct: 181 ETVEKKRRKNVKMSKEPQTVAARKRREKISEKIRVLQRLVPGGSKMDIGSMLDEAASYLK 240

Query: 241 FLRAQIKALEGLSYKVGNVDCLSTCNSFSFNSTIFPTN 267
           FLRAQIKALEGL+YK G++DCLSTC     NST FPTN
Sbjct: 241 FLRAQIKALEGLTYKFGSIDCLSTCT--PLNST-FPTN 270

[Close]

BLAST of Lcy02g006770 vs. NCBI nr
Match: XP_008447580.1 (PREDICTED: transcription factor bHLH87-like [Cucumis melo] >KAA0061131.1 transcription factor bHLH87-like [Cucumis melo var. makuwa] >TYK03801.1 transcription factor bHLH87-like [Cucumis melo var. makuwa])

HSP 1 Score: 325.5 bits (833), Expect = 4.4e-85
Identity = 192/279 (68.82%), Postives = 216/279 (77.42%), Query Frame = 0


Query: 1   MDDLLWNGSWSTGEDDGSEESLFSSDDPSRCSSPPLRELQTVARILGLPEIETPAPAV-- 60
           M+DLLWN SWS  ED GSEESLF SD P RCSSPPL+ELQTVARILGLPEI+T  P +  
Sbjct: 1   MEDLLWNSSWSNEEDSGSEESLFVSDVPGRCSSPPLQELQTVARILGLPEIDTRTPEIRV 60

Query: 61  -ELAMD------PKSWPAGASSGGVLLEELENDKGIAPEGGSWDIFENQQPKQQNPITQK 120
            +LA D       KS P   ++GGVL E LEND+GIAP+GG  DIFENQ+  QQNPI +K
Sbjct: 61  EKLAKDSNVFEREKSCPVEVTTGGVLFEVLENDQGIAPKGGFLDIFENQKLSQQNPIIEK 120

Query: 121 QPSSAKNNDHFQHSTTSSPSPSSSNN--DESEPVVRE--VVSQMKELIYHAAVFRPVNLG 180
            PSS        +STT SPSPSSS++  +E E VV +   VSQMK+ IY+AAVF+PVNLG
Sbjct: 121 LPSST-------NSTTPSPSPSSSSSYIEEIEQVVDQDRFVSQMKQWIYYAAVFKPVNLG 180

Query: 181 LETVEKKTRRNVKTSKEPQTVAARKRREKISEKIRVLQRLVPGGNKMDTASMLDEAASYL 240
           LETVEKK RRNVK SKEPQTVAARKRREKISEKIRVL+RLVPGG+KMD ASMLDEAASYL
Sbjct: 181 LETVEKKRRRNVKVSKEPQTVAARKRREKISEKIRVLRRLVPGGSKMDIASMLDEAASYL 240

Query: 241 KFLRAQIKALEGLSYKVGNVDCLSTCNSFSFNSTIFPTN 267
           KFLRAQIKALEGL+YK G+ DCLSTC  F   +  FPTN
Sbjct: 241 KFLRAQIKALEGLNYKFGSTDCLSTCTPF---NPTFPTN 269

[Close]

BLAST of Lcy02g006770 vs. NCBI nr
Match: KAG6606734.1 (Transcription factor basic helix-loop-helix 87, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 308.9 bits (790), Expect = 4.3e-80
Identity = 184/275 (66.91%), Postives = 200/275 (72.73%), Query Frame = 0


Query: 1   MDDLLWNGSWSTGEDDGSEESLFSSDDPSRCSSPPLRELQTVARILGLPEIETPAP---A 60
           MDDLLWNGSW+ GEDDG +ESL  SD  SRCSSPPL+ELQTVARILGL EIETP P   A
Sbjct: 28  MDDLLWNGSWNNGEDDGCKESLLFSDGSSRCSSPPLQELQTVARILGLSEIETPMPEMRA 87

Query: 61  VELAMDPKSWPAGASSGGVLLEELENDKGIAPEGGSWDIFENQQPKQQNPITQKQPSSAK 120
           VELA+DPKSWPAGAS GG+LL+ELENDKGI                              
Sbjct: 88  VELAVDPKSWPAGASPGGLLLKELENDKGI------------------------------ 147

Query: 121 NNDHFQHSTTSSPSPSSSNNDESEPVVR-EVVSQMKELIYHAAVFRPVNLGLETVEKKTR 180
                        SPSSSNN E+E   R ++VS+MK+LIYHAAVFRPVNLG+ETVEKK R
Sbjct: 148 -----------GVSPSSSNNYETESSDRDQIVSRMKKLIYHAAVFRPVNLGIETVEKKKR 207

Query: 181 RNVKTSKEPQTVAARKRREKISEKIRVLQRLVPGGNKMDTASMLDEAASYLKFLRAQIKA 240
           RNVK SKEPQTVAARKRREKISEKIRVLQRLVPGG+KMDTASMLDEAASYLKFLRAQIKA
Sbjct: 208 RNVKMSKEPQTVAARKRREKISEKIRVLQRLVPGGSKMDTASMLDEAASYLKFLRAQIKA 253

Query: 241 LEGLSYKVGNVDCLSTCNSFSFNSTIFPTNNAYFP 272
           LEG  YK+G+       N  SFN TIFP +NAYFP
Sbjct: 268 LEGNGYKLGS-------NCTSFNPTIFP-SNAYFP 253

[Close]

BLAST of Lcy02g006770 vs. TAIR 10
Match: AT3G21330.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 154.5 bits (389), Expect = 1.3e-37
Identity = 101/184 (54.89%), Postives = 122/184 (66.30%), Query Frame = 0


Query: 90  EGGSWDIFENQQPKQQNPITQKQPSSAKNNDHFQHSTTSSPSPSSSNNDESEPVVREVVS 149
           +GG   I++  Q K + P T+K+     +N  FQHST  S        D  EP   E ++
Sbjct: 194 KGGFKLIYDENQSKSKKPRTEKE-RGGSSNISFQHSTCLS--------DNVEPDA-EAIA 253

Query: 150 QMKELIYHAAVFRPVNLGLETVEKKTRRNVKTSKEPQTVAARKRREKISEKIRVLQRLVP 209
           QMKE+IY AA FRPVN GLE VEK  R+NVK S +PQTVAAR+RRE+ISEKIRVLQ LVP
Sbjct: 254 QMKEMIYRAAAFRPVNFGLEIVEKPKRKNVKISTDPQTVAARQRRERISEKIRVLQTLVP 313

Query: 210 GGNKMDTASMLDEAASYLKFLRAQIKALEGLSYKVGNVDCLSTCNSFSFNSTIFPT-NNA 269
           GG KMDTASMLDEAA+YLKFLRAQ+KALE L  K+   +      SFS   T FP  + +
Sbjct: 314 GGTKMDTASMLDEAANYLKFLRAQVKALENLRPKLDQTNL-----SFSSAPTSFPLFHPS 362

Query: 270 YFPL 273
           + PL
Sbjct: 374 FLPL 362

[Close]

BLAST of Lcy02g006770 vs. TAIR 10
Match: AT3G50330.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 107.8 bits (268), Expect = 1.4e-23
Identity = 59/111 (53.15%), Postives = 85/111 (76.58%), Query Frame = 0


Query: 129 SPSPSSSNNDESEPVVREV-VSQMKELIYHAAVFRPVNLGLETVEKKTRRNVKTSKEPQT 188
           +PSPSSS  ++         ++ M+E+I+  AV +P+++  E+V+   R+NV+ SK+PQ+
Sbjct: 72  APSPSSSLPEKRGGCSDNANMAAMREMIFRIAVMQPIHIDPESVKPPKRKNVRISKDPQS 131

Query: 189 VAARKRREKISEKIRVLQRLVPGGNKMDTASMLDEAASYLKFLRAQIKALE 239
           VAAR RRE+ISE+IR+LQRLVPGG KMDTASMLDEA  Y+KFL+ Q+++LE
Sbjct: 132 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSLE 182

[Close]

BLAST of Lcy02g006770 vs. TAIR 10
Match: AT5G09750.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 106.7 bits (265), Expect = 3.0e-23
Identity = 61/113 (53.98%), Postives = 80/113 (70.80%), Query Frame = 0


Query: 125 STTSSPSPSSSNNDESEPVVREVVSQMKELIYHAAVFRPVNLGLETVEKKTRRNVKTSKE 184
           +TT        + DE EP+  E +  MKE++Y  A  + V++   TV+K  RRNV+ S +
Sbjct: 71  TTTLLSGDQEDDEDEEEPL--EELGAMKEMMYKIAAMQSVDIDPATVKKPKRRNVRISDD 130

Query: 185 PQTVAARKRREKISEKIRVLQRLVPGGNKMDTASMLDEAASYLKFLRAQIKAL 238
           PQ+VAAR RRE+ISE+IR+LQRLVPGG KMDTASMLDEA  Y+KFL+ QI+ L
Sbjct: 131 PQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 181

[Close]

BLAST of Lcy02g006770 vs. TAIR 10
Match: AT5G67060.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 105.9 bits (263), Expect = 5.1e-23
Identity = 61/126 (48.41%), Postives = 88/126 (69.84%), Query Frame = 0


Query: 113 PSSAKNNDHFQHSTTSSPSPSSSNNDESEPVVREVVSQMKELIYHAAVFRPVNLGLETVE 172
           PSS   N  +        + S++NN+ +       ++ M+E+I+  AV +P+++  E V+
Sbjct: 66  PSSISPNTAYSSVFLDKRNNSNNNNNGTN------MAAMREMIFRIAVMQPIHIDPEAVK 125

Query: 173 KKTRRNVKTSKEPQTVAARKRREKISEKIRVLQRLVPGGNKMDTASMLDEAASYLKFLRA 232
              RRNV+ SK+PQ+VAAR RRE+ISE+IR+LQRLVPGG KMDTASMLDEA  Y+KFL+ 
Sbjct: 126 PPKRRNVRISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKK 185

Query: 233 QIKALE 239
           Q+++LE
Sbjct: 186 QVQSLE 185

[Close]

BLAST of Lcy02g006770 vs. TAIR 10
Match: AT4G00120.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 100.5 bits (249), Expect = 2.2e-21
Identity = 63/133 (47.37%), Postives = 87/133 (65.41%), Query Frame = 0


Query: 106 NPITQKQPSSAKNNDHFQHSTTSSPSPSSSNNDESEPVVREVVSQMKELIYHAAVFRPVN 165
           N +  ++ ++  N+ H  H     P  +  + DE E    E +  MKE+ Y  AV +PV+
Sbjct: 46  NDLLTQEHAAFLNDPH--HLMLDPPPETLIHLDEDEE-YDEDMDAMKEMQYMIAVMQPVD 105

Query: 166 LGLETVEKKTRRNVKTSKEPQTVAARKRREKISEKIRVLQRLVPGGNKMDTASMLDEAAS 225
           +   TV K  RRNV+ S +PQTV AR+RRE+ISEKIR+L+R+VPGG KMDTASMLDEA  
Sbjct: 106 IDPATVPKPNRRNVRISDDPQTVVARRRRERISEKIRILKRIVPGGAKMDTASMLDEAIR 165

Query: 226 YLKFLRAQIKALE 239
           Y KFL+ Q++ L+
Sbjct: 166 YTKFLKRQVRILQ 175

The following BLAST results are available for this feature:

BLAST of Lcy02g006770 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S3D2	1.8e-36	54.89	Transcription factor bHLH87 OS=Arabidopsis thaliana OX=3702 GN=BHLH87 PE=1 SV=1	[more]
A0A0P0WQ90	1.2e-24	48.23	Transcription factor LATE FLOWERING OS=Oryza sativa subsp. japonica OX=39947 GN=...	[more]
Q9SND4	1.9e-22	53.15	Transcription factor HEC2 OS=Arabidopsis thaliana OX=3702 GN=HEC2 PE=1 SV=1	[more]
Q9LXD8	4.2e-22	53.98	Transcription factor HEC3 OS=Arabidopsis thaliana OX=3702 GN=HEC3 PE=1 SV=1	[more]
Q9FHA7	7.2e-22	48.41	Transcription factor HEC1 OS=Arabidopsis thaliana OX=3702 GN=HEC1 PE=1 SV=1	[more]

BLAST of Lcy02g006770 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D4K8	5.5e-97	72.85	transcription factor bHLH87-like OS=Momordica charantia OX=3673 GN=LOC111016961 ...	[more]
A0A0A0LDH7	1.9e-86	69.78	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G850530 PE=4 S...	[more]
A0A5D3BVP3	2.1e-85	68.82	Transcription factor bHLH87-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3BIP2	2.1e-85	68.82	transcription factor bHLH87-like OS=Cucumis melo OX=3656 GN=LOC103489996 PE=4 SV...	[more]
A0A6J1GAJ8	4.6e-80	66.91	transcription factor bHLH87-like OS=Cucurbita moschata OX=3662 GN=LOC111452426 P...	[more]

BLAST of Lcy02g006770 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022148257.1	1.1e-96	72.85	transcription factor bHLH87-like [Momordica charantia]	[more]
XP_038902463.1	3.2e-91	73.80	transcription factor bHLH87-like [Benincasa hispida]	[more]
XP_004146860.1	4.0e-86	69.78	transcription factor bHLH87 [Cucumis sativus] >KGN59848.1 hypothetical protein C...	[more]
XP_008447580.1	4.4e-85	68.82	PREDICTED: transcription factor bHLH87-like [Cucumis melo] >KAA0061131.1 transcr...	[more]
KAG6606734.1	4.3e-80	66.91	Transcription factor basic helix-loop-helix 87, partial [Cucurbita argyrosperma ...	[more]

BLAST of Lcy02g006770 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G21330.1	1.3e-37	54.89	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G50330.1	1.4e-23	53.15	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G09750.1	3.0e-23	53.98	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G67060.1	5.1e-23	48.41	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G00120.1	2.2e-21	47.37	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 187..236 e-value: 4.8E-12 score: 56.0
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 189..230 e-value: 4.2E-6 score: 26.7
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 181..230 score: 15.414829
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 171..246 e-value: 7.6E-11 score: 44.0
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 183..240
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..35
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 97..143
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 57..76
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 87..144
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..35
None	No IPR available	PANTHER	PTHR45914:SF12	TRANSCRIPTION FACTOR BHLH87	coord: 93..266
None	No IPR available	PANTHER	PTHR45914	TRANSCRIPTION FACTOR HEC3-RELATED	coord: 93..266
None	No IPR available	CDD	cd11454	bHLH_AtIND_like	coord: 182..238 e-value: 2.70512E-34 score: 116.723

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy02g006770.1	Lcy02g006770.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity