Lcy02g006460 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy02g006460
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	RECA_2 domain-containing protein
Location	Chr02: 8479954 .. 8489554 (-)
RNA-Seq Expression	Lcy02g006460
Synteny	Lcy02g006460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCGTAAACCTCAGAACAGAAGTTGGTCTCTGTGCTCCAATGGAACTTGGCGGGTGATTACAGGGCTTAAATCCTTCTCCGCTGTCTCACGTAAAACCCTCAAATACTCTCTGATGCAGCTTTCAGACATGAAATCCCTCAGAACAATTTTCTATTCTCGAAAGCACTTTCTCATTTCCACAGCCTCCTCTTCCTCTACTCCATCGCTCATCTCCTGCCGCTCCCGCCTGAATCCCAACTCTTCCCTGTTTCACTTCGCCGGCCGTTTCAACAGCGCCCAGCTATCGACAATCGGCGTCGATGCCCCGAACGGCGACCGGCTCGGCGGTTCCTGTCCAGCAAATGGAAATGGCCGTGACGTTTGGACTATGTACGACCCAGTTACGAGTAAGCTTCTTACTCAAAGGGTCAAAAGCAGTAGCGATAGAAAAGAGCCCGAACCGACCATTGGAATTGAAACCTTCGGGGTTTCGTCGAGAAATGGAGGTGGGGCGGAGGATTTATTGAACGAGAAGGCTTCTGAGACTGTGAGGAAGGTGGGTTTAGGAGGTGGGTCGATTTGCAGGCCGAATTTGGGGAAGGTTGTGGGAGCGAAGAAGAAGAAGAGTAAGATTTCTTGGGTTTGTTCGAATTGTGGGCATAATGAGGGGCAGTGGTGGGGGACCTGTCGGTCGTGTAATATGGTTGGGACAATGAAGCAGTTTTCTGAAGGGGATGATAGTGGAGGAGGGAGTCGAGGGTTTGAAGTTTCTGAAAATGTGGTTAGAGCATGGCTTCCTAAGCAGGCCACAGACGTGCATCCTTTGCGGTTGACAGATGTGAACCGCGGGATCAATACTCTGGATTGGAGACTTCCTCTGTAAGTTATATTCTGCCAGTGCCACTCTTAATGTTTTTGATATCTCTTTTCTACTAGAAAAGCTCGTTGCAATATTCTTTTAATCCAAAATTGCTTTCAAAGTCACCCTTGGTGGAGTTCAGGGTAGTGTAATGAACTCAATGGATTATTAATTATAACATTATATGAATATATTGGATATCCGACGGTTTGTGAGGATATAATATATCTTTATTCTTTCCATTTTAGAAGGATGTTGATCGATCGGAAACTTTTTATCTTTTAACCTTTGCTTGACGTTTAGGCCTGGACCCTTTGGAAATGAAGTGGCAAGGGTGCTTGGTGGAGGGCTGGTACCAGGTTTGTTCAAACTTCAAATTTCTTTTGCATATTATTGTGATTGTGCGTTATAATTGTAATCTAGTTGTTCTTCATTCTACTTGCTTCTTTGTACAATTATCTGATTTCTTTTAGGTGAGGCGATCATTTCTGTTTTCTATACCTCTGATGCTCTTTTCCCTGGGTAATCAATTGAGCTGAAAAACATGTTTTTCTGTAAAACTTGTACTTCCACTCAAGATATGCAATGGATCCTTGTCAAATTAATTTTCATCTGCAGGACAGAAATTTATCTCAGAGTAGGATTTGTTATCCAACTCTCGCTAAACTAAACTTTAATGCAAGCACTAGCCTTTGATTTCTTTTGTTTAGTTTCTACTGAGATAGTTTTGCTTAATATAATAAACTAAATTTCTCTCATGTCTGGTCTTACCGAGAAAAAAAAGAAGAAACTAGACTTCTCTCAAGTAAATCTCACCTTAAGCTATATCATAATGATTTCTACAATCCTTCATTAATTTGAGTGTCATGGGTGCAATGTTACCATGTGTGATTTTGGTTTTCTATAGATGGCTTGACGACTTTATTATACTATTATCATATATTTGGATCATTGGACATATATCTAGTTTATTTTTACAGAATTTAGTTGTATAACTTATCTATCTTGTCACAGACTAATCATCTTAAGACTCTGGACTCATAACAGTCATGACATGGCATTTTTTATTACATCATCCTTCAGGTGTCCTTTGAATAGCTGTTTTTTAGTTTCCATTGATTTCTGGATCTTTCTGGTTTTGAAGGTTCTCTTGTTTTGGTTGGTGGTGATCCTGGTGTTGGCAAGAGTACATTGTTGTTGCAGGTATAAAGACGTGCAACCTCAATTTCAATTTGGTAGTAATTTGGAATTATATTTTATTATTATCTTATTTATACTTCTTATTTTTTGGTCATGGTGTCAAATCACACATTTGATTTGAAGATTGCTGCAATTTTAGCTGAAGGACGCGGCGAAGGTGAATTGGCATCGGTTGTTTATGTCTCTGGTGAAGAGGTTAGCCTCCTAACATTTTAAGATGGTCAATTTCCAATATTCTTTCTAAAAATTCTCCTAAAGAATGTCTAGGACTCTAGGTGAGTTCCTTTCTGAATTTGGATAATACCTTGTATACTTATCTATTTGTCCTTTGGCAGAGTGTGGAGCAAATTGGAAATAGGGCAGATCGATTGAATATTGAAACAGAGAATCTTTTCTTGTATTCAAGTACTGATGTTGAGGTGCATGATTATGTGCTTTTTCTTGCTAGTTCTTTTACTATTGACTTCTTCCACCCTTGTCAACCTGAATTTGTTGTTTAACTTGGATTATAGTTATGTTCTACTTATGCACATTCTAGATATTGATTCATGCACTCTTGCAAACATGTGGTCTAGGGACTTCAGGTTGTAGGTTGATAAATCATTAAGGATGGTTGGTATTTAGTTGTATGTATATCTGCTAATTAATGGAAGAAGTGGAAGTAATCGGTAGTTTTCCTTATTTCAGGATATATTTGAGAAGATTCAGCCTCTATCTCCTAGAGCCTTGATCATTGATTCTATTCAAACAGTTTATTTGCAAGGAGTAGCTGGAAGTGCTGGAGGGATTGGACAGGTTAGAAACATTATTCTACCAAACATGTGGTCTAGGTGAACATTTTTATGCTTATCCACTGCTTCACCATAATCATACAGTGGATTTCTAACTGTATAACTCACCCAAGGCTGCGATCTTAAGGACTCCAATGCTTGACAGGTGAAGGAATGCACCTCAGCCCTTCTGCGTTTTGCAAAGAGGACTGGCATCCCCATTTTATTGGTAAGTAAACCTAACATCAATTCATGTGTTGTTAGTAGGGAGTCAACTTTGCAAACTAGACTTGTAGTGTCCGATATAATAAATCCACTATTGTTTTTCCCTCTATGAATTTCTTTCTTAACTTTTCAAATCTTGAACCTTTGATATTTTACAACTATAGCATTTTTTCAACCTGGTATTGTCCTTGAGACTTTTGAAAGATTAGTCACCTCACATGTCACCTATTAATCATTCCTTATATAGGTGTATGTCTGGATGTAATACACACGTTATGATTGTTGAACTATTTCAGATTGGACATGTGAACAAATCAGGAGAAGTTGCTGGACCTCGAGTTTTGGAGCATATTGTGGATGTTGTACTGTATATGGAAGTGGGTACATGTACACCCCTTACATTTTACTTTTGTTATCTGTTTTTTAGCCATGTAACTCAGTCATATTATCATCAGCTTCATCAGAACCTAAATCTTTTTTTTTTGAAAATCATCAGAACCTAAATCTTGGTTTAAATAGCTATTAATTTTCAATGATCTACCATTGCACACCCACCTTTTCTCATTAATCTCTTTCCATATATGTTTGCTCTCACTAATTTAATTTCTCATTAGGCACACTTTCTCATCTCTCACTAATATCTTCTTTCCATATACGTATATTTTCTTATACCTCCGTCTCTTTTTATATAGTGCATTTGTTAAGTTTAGAAATGTAAATGTGACTGTTAGCACATATGGAAACCATTATAAGGAAATTGGATGAAAACAAGCATAATTGTCAAAAACCAAAATGAAAAATGAAATGGTTATCAAATAGGACCCTAAATAGTTATATTTAAAAAGCAGTACAGTATTTAATTTCTAAATTCATAATTTTGGTAAATGCTCTTTAAGTTCCAGTACACCTTTAATTTGATTTGATTTAATGTGTTGTTATAACCTACACTACATGGGTATTGGGTAGTGTAAGGAATCTCGTTTGTTCTTGAGTTTGTCCTATTTTGCTATTTTACTTTTATAAGTATTTAAAAAATGATTTGTGTGAAAGGAAAAAGGAGTATGGATGACGATGAAGTGATGTGTGGATTATTTAGGGGGAGAAATGCTCTTCGCATCGACTGCTTCGACCAGTGAAGAACCGATTTGGATCAACAGATGAGCTTGGAGTATTTGAGATGTTGCCGTCGGGACTGGAAGTGGTGTCAAATCCAAGCGAGATGTTCAGAAGGGATCACAATGCAAATTCAACCTCGGAGTATTTGGCAGGACTTGCTGTTGCAGTGATCATGGATGGAACTCGCACCTTCCTGCTTGAAATTCAGGTACTTATTCACTCAATCCCCTTCCTTCAGAAAGGATACCACATTCCAATTTTTTCTTATTAAAAGTATTTATCTAATTATAATTAGTTAAATTTCAAGTTTATTCCTCAATCATTGAGGTTCGTTCCTACTTTTTATAGGTCCTTGAACTTAAAAAAGTATTTAATAGGCATCTAAACTTTAAAAAGTATTTGGTTGGTGTGTCTACTAAAAAATTTATTTTTATTAGGTCCTTTTAACTTTGATTCTGCGTCTAATAAACCTCTAACATAAAATTTAGGAGTCAAATAGACACAAAATTCAAGAGCCCTATTCAATAAATTAAAAGTTGAAAGTTCAGACGTGTATTACATACTTTTAAAGTTTCGGAACCTATCAAGCATAAAATCAAAAGGTGATGGATCTATCATGCACAAAATTAAAAGTTTTAAAACCCATTAGACACAACCTTAAAAGTTAAACTAAACTTGTACATTTTTTCTTTTCTTTTTGAAAACTAAGCTTGTAATTGTTTTTTTTTTTTTTTGATAAAACTAAACTTGTAATTGTATCATAGGATTTTGGTTTTGATAATATTTTTAACGCAATATCTTTTAGGTTTTATTACAAGTTTGGTCCCTAAACTTTCAGGATTGTTTCAATTAGATCTTTGAACTATAAAAAATGTCTAATAGGTCATTGAACTTTCAAATTTGTGTCTAACATGGCCAACAAGAGCATAGCTCAACTGGCATAAAAGTTCGTATTACGACCAAGAGGTCAGAGGTTCAATCCCCCACCCCTTACATGTTGTCGAAAACATTTGTATCTAATAGGTCTCTGAATTTTAAAAATGTCTAATATGCCACTGAGCTTTTAATTTTGTGTCTAATAGGTCTCCGACACATTTGAGATTTTTAAAAATTAACCAATCTATTAGATATAAAATTGAATTTTATTCCTATTGGAATCCTAAACTTCCAACATGTATCTAGTAGGCTTGTGAATTTTAAAAAAGGTCAAATAGGTCAAAAACTTATTAGACACAATCCTGGAAGTTGAAAGATTTATTGGACACAAAAGTAAAAGTTTAAAGACCTACTGGATACTTTTTAAAATTCAATGACCTCTTTGGAGACAAAATTGAAAGTTCGAGGACCTAGTTGACATTTTTTTAAAGTTCAGGGACCCAATCGACACAACCCTGAAAGTTCAGGGACCAACTTGTAATTTAACCTATCTTTTATTACATTTTTTGCATTTCATTTAAAAAAAAACCCTCATATTTATTATTTTAATTAGAACAACTTTGAGACATTGAGAAATCCTCCCTATTTCACGAATTTATTGGATTGTCCAGGACTATCCTCATGGTTTGAGATTTTCTTTTTTAAAAAATTGTTATATTTTATTTGTTTGAGAATCCATGCTATTTACAATTGTGCTTTCTGTGTTGTGAAATTTCTGAATCACAAACTTCTCCAAATGAATTTTCTTCTTTGAATTTCTTAGTCCGAATTTGGAATTTCCTTTGATTATAAAGGCCTATTTGATAGCAATTTCATTTTTAAAAATTAACCTGACCACGTCAAACTTTAGCTAATATTCCTAAAAGGTTTTTTTTATTTTTATTTATTTTTATTTTATTTTTTATTTTTTTAATTTTTTTTAATTAAAAAAAGAACAAAGAAAAGTGTAAGCATAAGAAAAGAAAATAAGAAGTAATAACGTTTGTGAGTGATATGTGGTTCCTAGTTAGATTCTAGGTTTCTCTTTAGGCTTAGGTGACGAAGCCGTTTTATAATGATTGTTGATTGGAGGCCTTTTTTTTTTTTTTTTTCTTTGAAAGTGGCCCTTTCTCATCTTCAATTCGCGGACGATACTATTTTCTTTTGCTCGGGCATGGAGGATTCTTTCCTAATTTTGAACCATAACCTCAGTTTGTTCGAGTCCCTGTTGGGACTTAAAATCAATAAAGGAAAATGCCAAATCTTGGGTCTGAATTGCGAGGAAGACAAATTAAGAAGATGGGCTTCGTTGGTTGGGTGCGAGATTGGAGCCTTCCCTTCTTATTTAGGTCTCCCTCTCGGTCACAATCCTAAATTTGTCATCTTTTGGAACCCAATCATTGAGAAGGTTCGGAAAAGATTCGCCTCTTGGAAGAGAAGCTTCTTCTCTAAAGGGGGCAGAGTGACTCTTATTCGTTCCGTTCTAAGTGGCATTCCTATCTACTTTTTCTCTCTTCAGAGCCCCATGTCGGTCTATAATGTTTCGGAGAAGCTCCTGAGGGATTTTCTTTGGGAGGGGGTTGAAGAAGGGACAGGGGCTCACTTGGTGAGTTGGAATACTGTTGGAAAACTTGCGAGTCTGGGGGGTCTAGAATTGGGGAATCTGAGAATTCGTAACAGAGCGCTACTTGCTAAATGGCAATTCCGCCTCAAATTTGATTCTCTTTGGGTTAGGATTATCGAGAATAAATATGGGTGACATTCCTTCAATTGGCTCTAGGGTGTGGTAAAAGGCACCTTCAGGAATCCCTGGAAAAACATTTCTCTGGAGCTCTCCTCCTTTTCTTCCTTAGGCCAGTGTATCGCGGGGGATGGGAAGGACACTTATTTTTGGGAGGATTTTTGGGTGGGGGATCTCTCCCTCTGCTCACCGTTCCCTCGTTTATATCATTTATCCTCAATGAAAAATCGCACTGTGGCTGATGTCCTTGGCCATGTGGGGAGCCCCACTTCATTTTCCTTTGGTTTTTGCCATCCGTTATCTGATAGAAAAACCACGGACATCATGACCCTTCTTTCTTTGATTAAAGGGGTTTGTCGTAGTCCAGATAGGAGGGATGTTCGTTTTTGGAGTCTCAACCCTTCTGGGGGCTTTTCTTGTAGTTCGTTCTTTCAATTTTTGATTAATCCTTTCCCGGTTAGAAAGTCCGTTTTTTTCAAATCTATGGAAGGTTAAAGCTCCAAAGAAAGTTCGGTTCTTCGTTTGGCAGGTCATTTTGGGTCGTGTTAACACTATTGACAGGCTATCGAGAATGATGACCCCTGTGGTTGGCCCTTTTTGTTGCATTCATTGTCGGAAGGCAGAGGAAAATCTTGATCATTTGATGTGGGGTTGTGATTTTGCTCACTCAATCTGGAGCCTCTTCCTTGAGGTGTTCGAGTTCCAATTTGTTGGCCAACGTCGTTGCAGGGGGGTGATCGAGGAGTTCCTCCTCCATTTGCCATACCGGGAGAAGGGAAGGTTCTTATGGTTTGTTGGCGTTTGTGCTATTTTATGGGGTTTATGGAGGGAGAGGAATAATAAAATTTTTAGAGGGGTGGAGAGACAACCTTGTGAGGTTTGGGCTAATATTAGACTCTGCTTCGTTAGGTCTTATTTTGATCGACTGGAACCTATAGACGGGTTTCTTCTTTGGGGCTAGGTTTTTTGGATGCCATTGTATTCTTTCATTTTTTCTCAATGAAAGCTCGGTTATTCATTAAAAAAAAAAAAGAGATTGGAGGCCTTTTTTTAGTTTGCCTCCTTTTTTGTGGCTCTTTTTTTTTTTTTTGTATGTACACGTGTTCTTCATTTTTTTCTCAATGAAAACTCGATTGATCCTGAAAAAAAAAAAAAGAAATAACAATTTGATTGACTTCAAATCAACATATATCATTCTCATGGCTAACAAATCAATATATATATCATTTTGATCATTGGCTGCTAGCATTTTCTTGTAGGCATTGTGTTTGGCTCGATCAACTGTCACTAGGCACGTTAATGGGATTCAGCAAAGCAAGGCTGATATGATAATATCGGTACGTTGTTAATTGAGTTATTTCTGGTAAATTCAACATCACAAGAATCTACTTTTTGTTCCTTCTCAAAACAATTGACAAACTTTCTAAGACGCACTTGCAGTTGACAGTAGTCTAAAAAGTTCCTCAAGCACATGCTGGTTGCGAAATACTGTCTTCAATTGGTCATGCATCCAAACAACAATAAAAGCAAAGTCAAGGATGATGAATCTCGTTTTAATTTAAATTTACCTACGATGTCAATTTTAATGAACTTGAATTCTAGAGGTTCTGAAATGTAGCTTTATGCTACTTTTGTTGCTTATTTATTATCTCATGTTCAATTTCTTATCCTTGGTCCTTTTTTAACATTCCTTTTTCTACTTTTAATTATTTTGAACTTCTTTCGTGTGCCTACCTGATCTAACCTAGCCAGATTCTAAGAGAAAAGAAAAGAAGAATAGTTAAAGAAAAACTCTATTCACAGGATAGATAAAAGTGAAAATTATCATCTGATGATATATAGTTAATTGTTGAACTAATCAACTCTTTATAAATTGGTATTGAATTTATACATCCTATGAATGGTAGGTTCTCATGAAGCAAGCTGGGTTAAAGCTACAAGAAAGTGTGAGTTGACAGCTCTCCTTTTTTCTCCCCATCTAGAATTTTCTCACTATGCTTGTCAGTGGACTTGATCTTATTCTTCTCTTATTGATTAATGCAAAGTGGATGGATCTGCTTAATTATTGTCACTTGATTTGTTTTCTACTTTCATATTACAGGTAATTTTTTTGAATGTTGTTAGTGGGGTGACCTTGACAGAGACTGCAGGAGATCTTGCAATTGCAATGGCAATCTGTAGCAGGCATGTGATTCCAACTCATTGCACTTAACTGATAATCATACCTTTCTAGCTAAATGCAATATCCTCTTACCTCTCTAATTCATCTGCTTCTTTCTATAAATAATCTTTGGATTTGTCACTTCAGCTTTTTGGAGTTCCCCATTCCAAATGACATTGCATTCATTGGTGAAATTGGCCTTGGTGGTGAGCTTCGCATGGTAAGCACTCAATTTAAGTTTTAACATGACTTGCAAGAGATCATCTAGTATTAGGTCTATCGTTAGTAGACTTTTTTTTTTTCCTTTGATGAAATCTCAAATTTCATTAACGTTCAGGTGAGTAGAATGGAGAAGAGGATCAATACTGTAGCCAAACTAGGTTTCAAGAGATGTGTAGTACCCAAATCAGCTGAAAACTGTTTGGGAGTGGTAGAGTTAGGGGAGATGAAGCTCATAGGTTGCAGAAATTTGAAAGATGTTATCAATAGTGTGTTTATGGCGAGAGATGAAGCTAGCAGTCTACAATCTTTTGATGGGTAGTTGTAATTCTGTACATTTTTTTGTGTAAAGATGCAACTCATCCTAAAATGCAGTGAATGTATAGAAAATGTATCTTTTTTGGCCCTTCAAACC

mRNA sequence

CTCGTAAACCTCAGAACAGAAGTTGGTCTCTGTGCTCCAATGGAACTTGGCGGGTGATTACAGGGCTTAAATCCTTCTCCGCTGTCTCACGTAAAACCCTCAAATACTCTCTGATGCAGCTTTCAGACATGAAATCCCTCAGAACAATTTTCTATTCTCGAAAGCACTTTCTCATTTCCACAGCCTCCTCTTCCTCTACTCCATCGCTCATCTCCTGCCGCTCCCGCCTGAATCCCAACTCTTCCCTGTTTCACTTCGCCGGCCGTTTCAACAGCGCCCAGCTATCGACAATCGGCGTCGATGCCCCGAACGGCGACCGGCTCGGCGGTTCCTGTCCAGCAAATGGAAATGGCCGTGACGTTTGGACTATGTACGACCCAGTTACGAGTAAGCTTCTTACTCAAAGGGTCAAAAGCAGTAGCGATAGAAAAGAGCCCGAACCGACCATTGGAATTGAAACCTTCGGGGTTTCGTCGAGAAATGGAGGTGGGGCGGAGGATTTATTGAACGAGAAGGCTTCTGAGACTGTGAGGAAGGTGGGTTTAGGAGGTGGGTCGATTTGCAGGCCGAATTTGGGGAAGGTTGTGGGAGCGAAGAAGAAGAAGAGTAAGATTTCTTGGGTTTGTTCGAATTGTGGGCATAATGAGGGGCAGTGGTGGGGGACCTGTCGGTCGTGTAATATGGTTGGGACAATGAAGCAGTTTTCTGAAGGGGATGATAGTGGAGGAGGGAGTCGAGGGTTTGAAGTTTCTGAAAATGTGGTTAGAGCATGGCTTCCTAAGCAGGCCACAGACGTGCATCCTTTGCGGTTGACAGATGTGAACCGCGGGATCAATACTCTGGATTGGAGACTTCCTCTGCCTGGACCCTTTGGAAATGAAGTGGCAAGGGTGCTTGGTGGAGGGCTGGTACCAGGTTCTCTTGTTTTGGTTGGTGGTGATCCTGGTGTTGGCAAGAGTACATTGTTGTTGCAGATTGCTGCAATTTTAGCTGAAGGACGCGGCGAAGGTGAATTGGCATCGGTTGTTTATGTCTCTGGTGAAGAGAGTGTGGAGCAAATTGGAAATAGGGCAGATCGATTGAATATTGAAACAGAGAATCTTTTCTTGTATTCAAGTACTGATGTTGAGGATATATTTGAGAAGATTCAGCCTCTATCTCCTAGAGCCTTGATCATTGATTCTATTCAAACAGTTTATTTGCAAGGAGTAGCTGGAAGTGCTGGAGGGATTGGACAGGTGAAGGAATGCACCTCAGCCCTTCTGCGTTTTGCAAAGAGGACTGGCATCCCCATTTTATTGATTGGACATGTGAACAAATCAGGAGAAGTTGCTGGACCTCGAGTTTTGGAGCATATTGTGGATGTTGTACTGTATATGGAAGGGGAGAAATGCTCTTCGCATCGACTGCTTCGACCAGTGAAGAACCGATTTGGATCAACAGATGAGCTTGGAGTATTTGAGATGTTGCCGTCGGGACTGGAAGTGGTGTCAAATCCAAGCGAGATGTTCAGAAGGGATCACAATGCAAATTCAACCTCGGAGTATTTGGCAGGACTTGCTGTTGCAGTGATCATGGATGGAACTCGCACCTTCCTGCTTGAAATTCAGGCATTGTGTTTGGCTCGATCAACTGTCACTAGGCACGTTAATGGGATTCAGCAAAGCAAGGCTGATATGATAATATCGGTTCTCATGAAGCAAGCTGGGTTAAAGCTACAAGAAAGTGTAATTTTTTTGAATGTTGTTAGTGGGGTGACCTTGACAGAGACTGCAGGAGATCTTGCAATTGCAATGGCAATCTGTAGCAGCTTTTTGGAGTTCCCCATTCCAAATGACATTGCATTCATTGGTGAAATTGGCCTTGGTGGTGAGCTTCGCATGGTGAGTAGAATGGAGAAGAGGATCAATACTGTAGCCAAACTAGGTTTCAAGAGATGTGTAGTACCCAAATCAGCTGAAAACTGTTTGGGAGTGGTAGAGTTAGGGGAGATGAAGCTCATAGGTTGCAGAAATTTGAAAGATGTTATCAATAGTGTGTTTATGGCGAGAGATGAAGCTAGCAGTCTACAATCTTTTGATGGGTAGTTGTAATTCTGTACATTTTTTTGTGTAAAGATGCAACTCATCCTAAAATGCAGTGAATGTATAGAAAATGTATCTTTTTTGGCCCTTCAAACC

Coding sequence (CDS)

ATGCAGCTTTCAGACATGAAATCCCTCAGAACAATTTTCTATTCTCGAAAGCACTTTCTCATTTCCACAGCCTCCTCTTCCTCTACTCCATCGCTCATCTCCTGCCGCTCCCGCCTGAATCCCAACTCTTCCCTGTTTCACTTCGCCGGCCGTTTCAACAGCGCCCAGCTATCGACAATCGGCGTCGATGCCCCGAACGGCGACCGGCTCGGCGGTTCCTGTCCAGCAAATGGAAATGGCCGTGACGTTTGGACTATGTACGACCCAGTTACGAGTAAGCTTCTTACTCAAAGGGTCAAAAGCAGTAGCGATAGAAAAGAGCCCGAACCGACCATTGGAATTGAAACCTTCGGGGTTTCGTCGAGAAATGGAGGTGGGGCGGAGGATTTATTGAACGAGAAGGCTTCTGAGACTGTGAGGAAGGTGGGTTTAGGAGGTGGGTCGATTTGCAGGCCGAATTTGGGGAAGGTTGTGGGAGCGAAGAAGAAGAAGAGTAAGATTTCTTGGGTTTGTTCGAATTGTGGGCATAATGAGGGGCAGTGGTGGGGGACCTGTCGGTCGTGTAATATGGTTGGGACAATGAAGCAGTTTTCTGAAGGGGATGATAGTGGAGGAGGGAGTCGAGGGTTTGAAGTTTCTGAAAATGTGGTTAGAGCATGGCTTCCTAAGCAGGCCACAGACGTGCATCCTTTGCGGTTGACAGATGTGAACCGCGGGATCAATACTCTGGATTGGAGACTTCCTCTGCCTGGACCCTTTGGAAATGAAGTGGCAAGGGTGCTTGGTGGAGGGCTGGTACCAGGTTCTCTTGTTTTGGTTGGTGGTGATCCTGGTGTTGGCAAGAGTACATTGTTGTTGCAGATTGCTGCAATTTTAGCTGAAGGACGCGGCGAAGGTGAATTGGCATCGGTTGTTTATGTCTCTGGTGAAGAGAGTGTGGAGCAAATTGGAAATAGGGCAGATCGATTGAATATTGAAACAGAGAATCTTTTCTTGTATTCAAGTACTGATGTTGAGGATATATTTGAGAAGATTCAGCCTCTATCTCCTAGAGCCTTGATCATTGATTCTATTCAAACAGTTTATTTGCAAGGAGTAGCTGGAAGTGCTGGAGGGATTGGACAGGTGAAGGAATGCACCTCAGCCCTTCTGCGTTTTGCAAAGAGGACTGGCATCCCCATTTTATTGATTGGACATGTGAACAAATCAGGAGAAGTTGCTGGACCTCGAGTTTTGGAGCATATTGTGGATGTTGTACTGTATATGGAAGGGGAGAAATGCTCTTCGCATCGACTGCTTCGACCAGTGAAGAACCGATTTGGATCAACAGATGAGCTTGGAGTATTTGAGATGTTGCCGTCGGGACTGGAAGTGGTGTCAAATCCAAGCGAGATGTTCAGAAGGGATCACAATGCAAATTCAACCTCGGAGTATTTGGCAGGACTTGCTGTTGCAGTGATCATGGATGGAACTCGCACCTTCCTGCTTGAAATTCAGGCATTGTGTTTGGCTCGATCAACTGTCACTAGGCACGTTAATGGGATTCAGCAAAGCAAGGCTGATATGATAATATCGGTTCTCATGAAGCAAGCTGGGTTAAAGCTACAAGAAAGTGTAATTTTTTTGAATGTTGTTAGTGGGGTGACCTTGACAGAGACTGCAGGAGATCTTGCAATTGCAATGGCAATCTGTAGCAGCTTTTTGGAGTTCCCCATTCCAAATGACATTGCATTCATTGGTGAAATTGGCCTTGGTGGTGAGCTTCGCATGGTGAGTAGAATGGAGAAGAGGATCAATACTGTAGCCAAACTAGGTTTCAAGAGATGTGTAGTACCCAAATCAGCTGAAAACTGTTTGGGAGTGGTAGAGTTAGGGGAGATGAAGCTCATAGGTTGCAGAAATTTGAAAGATGTTATCAATAGTGTGTTTATGGCGAGAGATGAAGCTAGCAGTCTACAATCTTTTGATGGGTAG

Protein sequence

MQLSDMKSLRTIFYSRKHFLISTASSSSTPSLISCRSRLNPNSSLFHFAGRFNSAQLSTIGVDAPNGDRLGGSCPANGNGRDVWTMYDPVTSKLLTQRVKSSSDRKEPEPTIGIETFGVSSRNGGGAEDLLNEKASETVRKVGLGGGSICRPNLGKVVGAKKKKSKISWVCSNCGHNEGQWWGTCRSCNMVGTMKQFSEGDDSGGGSRGFEVSENVVRAWLPKQATDVHPLRLTDVNRGINTLDWRLPLPGPFGNEVARVLGGGLVPGSLVLVGGDPGVGKSTLLLQIAAILAEGRGEGELASVVYVSGEESVEQIGNRADRLNIETENLFLYSSTDVEDIFEKIQPLSPRALIIDSIQTVYLQGVAGSAGGIGQVKECTSALLRFAKRTGIPILLIGHVNKSGEVAGPRVLEHIVDVVLYMEGEKCSSHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHNANSTSEYLAGLAVAVIMDGTRTFLLEIQALCLARSTVTRHVNGIQQSKADMIISVLMKQAGLKLQESVIFLNVVSGVTLTETAGDLAIAMAICSSFLEFPIPNDIAFIGEIGLGGELRMVSRMEKRINTVAKLGFKRCVVPKSAENCLGVVELGEMKLIGCRNLKDVINSVFMARDEASSLQSFDG

Homology

[Close]

BLAST of Lcy02g006460 vs. ExPASy Swiss-Prot
Match: P37572 (DNA repair protein RadA OS=Bacillus subtilis (strain 168) OX=224308 GN=radA PE=1 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 1.3e-96
Identity = 205/481 (42.62%), Postives = 288/481 (59.88%), Query Frame = 0


Query: 164 KSKISWVCSNCGHNEGQWWGTCRSCNMVGTMKQFSEGDDSGGGSRGFEVSENVVRAWLPK 223
           K+K  ++C +CG+   +W G C  C    TM                 V E + +A   +
Sbjct: 3   KTKSKFICQSCGYESPKWMGKCPGCGAWNTM-----------------VEEMIKKAPANR 62

Query: 224 QATDVHPLRLTDVNRGINTLDW-RLPLPGPFGNEVARVLGGGLVPGSLVLVGGDPGVGKS 283
           +A   H ++       I +++    P       E  RVLGGG+V GSLVL+GGDPG+GKS
Sbjct: 63  RAAFSHSVQTVQKPSPITSIETSEEPRVKTQLGEFNRVLGGGVVKGSLVLIGGDPGIGKS 122

Query: 284 TLLLQIAAILAEGRGEGELASVVYVSGEESVEQIGNRADRLNIETENLFLYSSTDVEDIF 343
           TLLLQ++A L+     G   SV+Y+SGEESV+Q   RADRL I   +L + S TD+E I 
Sbjct: 123 TLLLQVSAQLS-----GSSNSVLYISGEESVKQTKLRADRLGINNPSLHVLSETDMEYIS 182

Query: 344 EKIQPLSPRALIIDSIQTVYLQGVAGSAGGIGQVKECTSALLRFAKRTGIPILLIGHVNK 403
             IQ ++P  +++DSIQTVY   +  + G + QV+ECT+ L++ AK  GIPI ++GHV K
Sbjct: 183 SAIQEMNPSFVVVDSIQTVYQSDITSAPGSVSQVRECTAELMKIAKTKGIPIFIVGHVTK 242

Query: 404 SGEVAGPRVLEHIVDVVLYMEGEKCSSHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNP 463
            G +AGPR+LEH+VD VLY EGE+  + R+LR VKNRFGST+E+G+FEM   GL  V NP
Sbjct: 243 EGSIAGPRLLEHMVDTVLYFEGERHHTFRILRAVKNRFGSTNEMGIFEMREEGLTEVLNP 302

Query: 464 SEMFRRDHNANSTSEYLAGLAVAVIMDGTRTFLLEIQALCLARS--TVTRHVNGIQQSKA 523
           SE+F  + +A S     AG ++   M+GTR  L+EIQAL    S     R   GI  ++ 
Sbjct: 303 SEIFLEERSAGS-----AGSSITASMEGTRPILVEIQALISPTSFGNPRRMATGIDHNRV 362

Query: 524 DMIISVLMKQAGLKLQESVIFLNVVSGVTLTETAGDLAIAMAICSSFLEFPIPNDIAFIG 583
            ++++VL K+ GL LQ    +L V  GV L E A DLAI ++I SSF + P      FIG
Sbjct: 363 SLLMAVLEKRVGLLLQNQDAYLKVAGGVKLDEPAIDLAIVISIASSFRDTPPNPADCFIG 422

Query: 584 EIGLGGELRMVSRMEKRINTVAKLGFKRCVVPKSAENCLGVVELGEMKLIGCRNLKDVIN 642
           E+GL GE+R VSR+E+R+   AKLGFKR ++P  A N  G  +   +++IG  N+ + + 
Sbjct: 423 EVGLTGEVRRVSRIEQRVKEAAKLGFKRMIIP--AANLDGWTKPKGIEVIGVANVAEALR 454

[Close]

BLAST of Lcy02g006460 vs. ExPASy Swiss-Prot
Match: Q9KGG1 (DNA repair protein RadA OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) OX=272558 GN=radA PE=3 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 3.1e-95
Identity = 202/480 (42.08%), Postives = 297/480 (61.88%), Query Frame = 0


Query: 164 KSKISWVCSNCGHNEGQWWGTCRSCNMVGTM-KQFSEGDDSGGGSRGFEVSENVVRAWLP 223
           K K  ++C  CG+   +W G C  C    +M ++F+            EV     R+++ 
Sbjct: 3   KKKTKFMCQECGYESAKWMGKCPGCQSWNSMVEEFT------------EVKAKSSRSYVT 62

Query: 224 KQATDVHPLRLTDVNRGINTLDWRLPLPGPFGNEVARVLGGGLVPGSLVLVGGDPGVGKS 283
             A    P  +T V R       + P       E+ RVLGGG+VPGSLVLVGGDPG+GKS
Sbjct: 63  SGAGIAKPQPITKVERE------QEPRIDTSMKELNRVLGGGIVPGSLVLVGGDPGIGKS 122

Query: 284 TLLLQIAAILAEGRGEGELASVVYVSGEESVEQIGNRADRLNIETENLFLYSSTDVEDIF 343
           TLLLQ++A LA+ +       V+Y+SGEESV+Q   R+DRL + +++L++ + TD+E I 
Sbjct: 123 TLLLQLSARLADLK-----QRVLYISGEESVKQTKIRSDRLGVLSDHLYVLAETDMEKIE 182

Query: 344 EKIQPLSPRALIIDSIQTVYLQGVAGSAGGIGQVKECTSALLRFAKRTGIPILLIGHVNK 403
           + I  + P  +IIDSIQTVY   +  + G + QV+ECT++ +R AK TG+ I ++GHV K
Sbjct: 183 QAIGEVDPTLVIIDSIQTVYQDEITSAPGSVAQVRECTASFMRIAKTTGVAIFIVGHVTK 242

Query: 404 SGEVAGPRVLEHIVDVVLYMEGEKCSSHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNP 463
            G +AGP++LEH+VD VLY EGE+  ++R+LR VKNRFGST+E+G+FEM  SGLE V+NP
Sbjct: 243 QGAIAGPKLLEHMVDSVLYFEGERHHTYRILRAVKNRFGSTNEMGIFEMKESGLEEVANP 302

Query: 464 SEMFRRDHNANSTSEYLAGLAVAVIMDGTRTFLLEIQALCLARS--TVTRHVNGIQQSKA 523
           SE+F  D ++      +AG  V   M+GTR  L+E+QAL    S     R   G+  ++ 
Sbjct: 303 SEIFLEDRSSG-----VAGSTVVASMEGTRPVLVELQALISPTSFGNPRRMATGVDHNRI 362

Query: 524 DMIISVLMKQAGLKLQESVIFLNVVSGVTLTETAGDLAIAMAICSSFL-EFPIPNDIAFI 583
            ++++VL K+ G+ LQ    ++NV  GV L E A DL IA++I SSF  +   P+++  I
Sbjct: 363 SLLMAVLEKRVGMLLQNQDAYVNVAGGVRLDEPAIDLGIAVSIASSFRNQHTNPHEVV-I 422

Query: 584 GEIGLGGELRMVSRMEKRINTVAKLGFKRCVVPKSAENCLGVVELGEMKLIGCRNLKDVI 640
           GEIGL GE+R VSR+++R+N  AKLGFKR ++P   +N  G      +++IG   ++D +
Sbjct: 423 GEIGLTGEVRRVSRIDQRVNEAAKLGFKRVIIPD--KNLGGWTIPSTIEVIGVSTVQDAL 451

[Close]

BLAST of Lcy02g006460 vs. ExPASy Swiss-Prot
Match: Q92F42 (DNA repair protein RadA OS=Listeria innocua serovar 6a (strain ATCC BAA-680 / CLIP 11262) OX=272626 GN=radA PE=3 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 2.9e-93
Identity = 197/480 (41.04%), Postives = 286/480 (59.58%), Query Frame = 0


Query: 162 KKKSKISWVCSNCGHNEGQWWGTCRSCNMVGTMKQFSEGDDSGGGSRGFEVSENVVRAWL 221
           K K    +VC +CG+   +W G C +CN    M +  E       +              
Sbjct: 3   KAKRTTKFVCQSCGYESAKWMGKCPNCNEWNQMVEALEPSKKSRSAFN--------HTGE 62

Query: 222 PKQATDVHPLRLTDVNRGINTLDWRLPLPGPFGNEVARVLGGGLVPGSLVLVGGDPGVGK 281
           P +AT +  +   +  R    ++  +P       E+ RVLGGG+VPGS+VLVGGDPG+GK
Sbjct: 63  PSKATPITQIASEEEAR----VETNMP-------ELNRVLGGGVVPGSMVLVGGDPGIGK 122

Query: 282 STLLLQIAAILAEGRGEGELASVVYVSGEESVEQIGNRADRLNIETENLFLYSSTDVEDI 341
           STLLLQ++A L           V+Y+SGEES++Q   RA+RL +  +NL++Y+ T++E +
Sbjct: 123 STLLLQVSAQLTLTN-----KKVLYISGEESIKQTKLRAERLQVSGDNLYVYAETNLEAV 182

Query: 342 FEKIQPLSPRALIIDSIQTVYLQGVAGSAGGIGQVKECTSALLRFAKRTGIPILLIGHVN 401
            E I  + P  ++IDSIQTVY   V  +AG + QV+ECT+AL+R AK   I I ++GHV 
Sbjct: 183 QETIDFVKPDFVVIDSIQTVYHPDVTSAAGSVSQVRECTAALMRIAKMQNIAIFIVGHVT 242

Query: 402 KSGEVAGPRVLEHIVDVVLYMEGEKCSSHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSN 461
           K G +AGPR+LEH+VD VLY EGE+  ++R+LR VKNRFGST+E+G+FEM   GL  V+N
Sbjct: 243 KEGAIAGPRLLEHMVDTVLYFEGERHHAYRILRAVKNRFGSTNEMGIFEMRDIGLVEVAN 302

Query: 462 PSEMFRRDHNANSTSEYLAGLAVAVIMDGTRTFLLEIQALCLAR--STVTRHVNGIQQSK 521
           PSE+F  +       E  +G  V   M+GTR  L+EIQAL          R   GI  +K
Sbjct: 303 PSEVFLEER-----LEGASGSTVVASMEGTRPVLVEIQALVSPTMFGNAKRMATGIDYNK 362

Query: 522 ADMIISVLMKQAGLKLQESVIFLNVVSGVTLTETAGDLAIAMAICSSFLEFPIPNDIAFI 581
             +I++VL K+ GL LQ    +L    GV L E A DLA+A+++ SS+ + P  +   FI
Sbjct: 363 VSLIMAVLEKRVGLMLQNQDAYLKAAGGVKLDEPAVDLAVAVSVASSYRDKPTRSTDCFI 422

Query: 582 GEIGLGGELRMVSRMEKRINTVAKLGFKRCVVPKSAENCLGVVELGEMKLIGCRNLKDVI 640
           GE+GL GE+R V+R+E+R+   AKLGFKR  +PK+ E    V +  +++++G   + + +
Sbjct: 423 GELGLTGEIRRVARIEQRVQEAAKLGFKRIFIPKNNEGTWKVPK--DVQVVGVETIGEAL 451

[Close]

BLAST of Lcy02g006460 vs. ExPASy Swiss-Prot
Match: Q48761 (DNA repair protein RadA OS=Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) OX=169963 GN=radA PE=3 SV=2)

HSP 1 Score: 340.9 bits (873), Expect = 3.2e-92
Identity = 194/457 (42.45%), Postives = 272/457 (59.52%), Query Frame = 0


Query: 162 KKKSKISWVCSNCGHNEGQWWGTCRSCNMVGTMKQFSEGDDSGGGSRGFEVSENVVRAWL 221
           K K    +VC  CG+   +W G C +CN    M +  E       +              
Sbjct: 3   KAKRTTKFVCQACGYESAKWMGKCPNCNEWNQMVEALEPSKKSRSAFN--------HTGE 62

Query: 222 PKQATDVHPLRLTDVNRGINTLDWRLPLPGPFGNEVARVLGGGLVPGSLVLVGGDPGVGK 281
           P +AT +  +      R    ++  +P       E+ RVLGGG+VPGS+VLVGGDPG+GK
Sbjct: 63  PSKATPITQIASETEKR----VETNMP-------ELNRVLGGGVVPGSMVLVGGDPGIGK 122

Query: 282 STLLLQIAAILAEGRGEGELASVVYVSGEESVEQIGNRADRLNIETENLFLYSSTDVEDI 341
           STLLLQ++A L           V+Y+SGEES++Q   RA+RL +  +NL++Y+ T++E +
Sbjct: 123 STLLLQVSAQLTLTN-----KKVLYISGEESIKQTKLRAERLQVSGDNLYVYAETNLEAV 182

Query: 342 FEKIQPLSPRALIIDSIQTVYLQGVAGSAGGIGQVKECTSALLRFAKRTGIPILLIGHVN 401
            E I  + P  ++IDSIQTVY   V  +AG + QV+ECT+ L+R AK   I I ++GHV 
Sbjct: 183 QETIDFVKPDFVVIDSIQTVYHSDVTSAAGSVSQVRECTATLMRIAKMQNIAIFIVGHVT 242

Query: 402 KSGEVAGPRVLEHIVDVVLYMEGEKCSSHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSN 461
           K G +AGPR+LEH+VD VLY EGE+  ++R+LR VKNRFGST+E+G+FEM   GL  V+N
Sbjct: 243 KEGAIAGPRLLEHMVDTVLYFEGERHHAYRILRAVKNRFGSTNEMGIFEMRDVGLVEVAN 302

Query: 462 PSEMFRRDHNANSTSEYLAGLAVAVIMDGTRTFLLEIQALCLAR--STVTRHVNGIQQSK 521
           PSE+F  +       E  +G  V   M+GTR  L+EIQAL          R   GI  +K
Sbjct: 303 PSEVFLEER-----LEGASGSTVVASMEGTRPVLVEIQALVSPTMFGNAKRMATGIDYNK 362

Query: 522 ADMIISVLMKQAGLKLQESVIFLNVVSGVTLTETAGDLAIAMAICSSFLEFPIPNDIAFI 581
             +I++VL K+ GL LQ    +L    GV L E A DLA+A+++ SS+ + P  +   FI
Sbjct: 363 VSLIMAVLEKRVGLMLQNQDAYLKAAGGVKLDEPAVDLAVAVSVASSYRDKPTRSTDCFI 422

Query: 582 GEIGLGGELRMVSRMEKRINTVAKLGFKRCVVPKSAE 617
           GE+GL GE+R V+R+E+R+   AKLGFKR  +PK+ E
Sbjct: 423 GELGLTGEIRRVARIEQRVQEAAKLGFKRIFIPKNNE 430

[Close]

BLAST of Lcy02g006460 vs. ExPASy Swiss-Prot
Match: P74391 (DNA repair protein RadA OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=radA PE=3 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 2.0e-89
Identity = 191/490 (38.98%), Postives = 291/490 (59.39%), Query Frame = 0


Query: 164 KSKISWVCSNCGHNEGQWWGTCRSCNMVGTMKQFSEGDDSGG---GSRGFEVS-ENVVRA 223
           K++  +VCS CG +  QW+G C  C+  G++++      S G    S G + S  + V+ 
Sbjct: 3   KARTKFVCSACGADHAQWFGRCPKCHEYGSLQEEIVNAVSSGTNHRSLGAQKSRSSKVKT 62

Query: 224 WLPKQATDVHPLRLTDVNRGINTLDWRLPLPGPFGNEVARVLGGGLVPGSLVLVGGDPGV 283
             P+ A     +R  +  R ++              E+ RVLGGG+VPG+L+L+GGDPG+
Sbjct: 63  GQPQAALTFSQIRQENQGRFLSGY-----------GELDRVLGGGIVPGALILIGGDPGI 122

Query: 284 GKSTLLLQIAAILAEGRGEGELASVVYVSGEESVEQIGNRADRLNI-------------- 343
           GKSTLLLQ+A  LA       L  ++YVS EES +QI  RA RL I              
Sbjct: 123 GKSTLLLQVAFQLAT-----RLPRILYVSAEESGQQIKLRATRLGITQTVEPSQAQDGIN 182

Query: 344 ---ETENLFLYSSTDVEDIFEKIQPLSPRALIIDSIQTVYLQGVAGSAGGIGQVKECTSA 403
                 NLF+   T+++DI  +++ L P+  IIDSIQ +Y   ++ + G + QV+ECT  
Sbjct: 183 NLAHDGNLFVLPETNLDDILRELEALQPQVAIIDSIQNLYFPALSSAPGSVSQVRECTGL 242

Query: 404 LLRFAKRTGIPILLIGHVNKSGEVAGPRVLEHIVDVVLYMEGEKCSSHRLLRPVKNRFGS 463
           L++ AKR  I + ++GHV K G +AGP+VLEH+VD VLY +G++ +SHRLLR VKNRFG+
Sbjct: 243 LMQLAKRDHISLFIVGHVTKEGAIAGPKVLEHLVDTVLYFQGDRFASHRLLRSVKNRFGA 302

Query: 464 TDELGVFEMLPSGLEVVSNPSEMFRRDHNANSTSEYLAGLAVAVIMDGTRTFLLEIQALC 523
           T E+G+FEM+ SGL+ V NPS++F       S  E+++G A+ V  +GTR  ++E+QAL 
Sbjct: 303 TQEIGIFEMVQSGLQEVLNPSQLF-----LGSREEFMSGTAITVACEGTRPLVVELQALV 362

Query: 524 LARSTVT--RHVNGIQQSKADMIISVLMKQAGLKLQESVIFLNVVSGVTLTETAGDLAIA 583
              S  +  R   G+  ++   +++VL K+ G+ L +   +L+V  G+ + E A DLA+A
Sbjct: 363 SPTSYASPRRSTTGVDYNRLLQVLAVLEKRLGVPLSKLDAYLSVAGGLEVEEPAVDLAMA 422

Query: 584 MAICSSFLEFPIPNDIAFIGEIGLGGELRMVSRMEKRINTVAKLGFKRCVVPKSAENCLG 631
           +A+ +SF +  +   +  +GEIGLGG++R VS++E R+   AKLGFK+ +VPK       
Sbjct: 423 IALVASFRDRVVDPTMIILGEIGLGGQIRPVSQLEIRLKEAAKLGFKKAIVPKGQTG--- 467

[Close]

BLAST of Lcy02g006460 vs. ExPASy TrEMBL
Match: A0A6J1ITP4 (uncharacterized protein LOC111479856 OS=Cucurbita maxima OX=3661 GN=LOC111479856 PE=4 SV=1)

HSP 1 Score: 1164.1 bits (3010), Expect = 0.0e+00
Identity = 593/657 (90.26%), Postives = 622/657 (94.67%), Query Frame = 0


Query: 1   MQLSDMKSLRTIFYSRKHFLISTASSSSTPSLISCRSRLNPNSSLFHFAGRFNSAQLSTI 60
           MQLSDMKSLRTIF+SRKHFLIST SSSSTPS IS RSRLNP+SSLFH AGRFN+AQLST 
Sbjct: 1   MQLSDMKSLRTIFFSRKHFLISTISSSSTPSPISSRSRLNPSSSLFHCAGRFNAAQLSTT 60

Query: 61  GVDAPNGDRLGGSCPANGNGRDVWTMYDPVTSKLLTQRVKSSSDRKEPEPTIGIETFGVS 120
            V APNG+ L  S P NG  R VWT+YDPVTSKLLTQRVKSSSDRK+PEP+ G ETFG S
Sbjct: 61  DVPAPNGNCLAASGPGNGKDRGVWTIYDPVTSKLLTQRVKSSSDRKDPEPSFGNETFGAS 120

Query: 121 SRNGGGAEDLLNEKASETVRKVGLGGGSICRPNLGKVVGAKKKKSKISWVCSNCGHNEGQ 180
           SRNG G E+ LNEK SE+VRKVGL GGS+ RP LGK+VG+KKKKSK+SWVCS+CGH+EGQ
Sbjct: 121 SRNGDGTEEFLNEKTSESVRKVGLEGGSVSRPKLGKIVGSKKKKSKVSWVCSSCGHSEGQ 180

Query: 181 WWGTCRSCNMVGTMKQFSEGDDSGGGSRGFEVSENVVRAWLPKQATDVHPLRLTDVNRGI 240
           WWGTCRSC+MVGTMKQF+EGDD+GGGSRGFEVSENVVRAWLPKQATDVHPLRLTDVNRGI
Sbjct: 181 WWGTCRSCDMVGTMKQFTEGDDTGGGSRGFEVSENVVRAWLPKQATDVHPLRLTDVNRGI 240

Query: 241 NTLDWRLPLPGPFGNEVARVLGGGLVPGSLVLVGGDPGVGKSTLLLQIAAILAEGRGEGE 300
           NTLDWRLPLPGPFGNEVARVLGGGLVPGSLVLVGGDPGVGKSTLLLQIAAILAE  GEG+
Sbjct: 241 NTLDWRLPLPGPFGNEVARVLGGGLVPGSLVLVGGDPGVGKSTLLLQIAAILAEACGEGD 300

Query: 301 LASVVYVSGEESVEQIGNRADRLNIETENLFLYSSTDVEDIFEKIQPLSPRALIIDSIQT 360
           L SV+YVSGEESV+QIGNRADRLNIETENLFLYSSTDVEDIFEKIQPLSPRALIIDSIQT
Sbjct: 301 LTSVIYVSGEESVDQIGNRADRLNIETENLFLYSSTDVEDIFEKIQPLSPRALIIDSIQT 360

Query: 361 VYLQGVAGSAGGIGQVKECTSALLRFAKRTGIPILLIGHVNKSGEVAGPRVLEHIVDVVL 420
           VYLQGVAGSAGGIGQVKECTSALLRFAKRTGIPILLIGHVNKSGEVAGPRVLEHIVDVVL
Sbjct: 361 VYLQGVAGSAGGIGQVKECTSALLRFAKRTGIPILLIGHVNKSGEVAGPRVLEHIVDVVL 420

Query: 421 YMEGEKCSSHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHNANSTSEYLA 480
           YMEGEKCSSHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRD+NANS SEYLA
Sbjct: 421 YMEGEKCSSHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDNNANSNSEYLA 480

Query: 481 GLAVAVIMDGTRTFLLEIQALCLARSTVTRHVNGIQQSKADMIISVLMKQAGLKLQESVI 540
           GLAVAVIMDGTRTFLLEIQALCL+RS+V+RHVNGIQQSKADMIISVLMKQAGLKLQ+SVI
Sbjct: 481 GLAVAVIMDGTRTFLLEIQALCLSRSSVSRHVNGIQQSKADMIISVLMKQAGLKLQDSVI 540

Query: 541 FLNVVSGVTLTETAGDLAIAMAICSSFLEFPIPNDIAFIGEIGLGGELRMVSRMEKRINT 600
           FLNVVSGVTLTETAGDLAIAMAICSSFLEFPIPNDIAFIGEIGLGGELRMVSRMEKRINT
Sbjct: 541 FLNVVSGVTLTETAGDLAIAMAICSSFLEFPIPNDIAFIGEIGLGGELRMVSRMEKRINT 600

Query: 601 VAKLGFKRCVVPKSAENCLGVVELGEMKLIGCRNLKDVINSVFMARDEASSLQSFDG 658
           V+KLGFKRCVVPKSAE CLGVVELGE +LIGCRNLKDVIN VFMARD A S+QSF G
Sbjct: 601 VSKLGFKRCVVPKSAEKCLGVVELGETRLIGCRNLKDVINDVFMARDGARSVQSFVG 657

[Close]

BLAST of Lcy02g006460 vs. ExPASy TrEMBL
Match: A0A6J1GX44 (uncharacterized protein LOC111457955 OS=Cucurbita moschata OX=3662 GN=LOC111457955 PE=4 SV=1)

HSP 1 Score: 1149.0 bits (2971), Expect = 0.0e+00
Identity = 589/662 (88.97%), Postives = 616/662 (93.05%), Query Frame = 0


Query: 1   MQLSDMKSLRTIFYSRKHFLISTASSSSTPSLISCRSRLNPNSSLFHFAGRFNSAQLSTI 60
           MQ SDMKSLRTIF+SRKHFLIST         IS RSRLNPNSSLFH AGRF++A+LSTI
Sbjct: 1   MQFSDMKSLRTIFFSRKHFLIST---------ISSRSRLNPNSSLFHCAGRFHAAKLSTI 60

Query: 61  GVDAPNGDRLGGSCPANGNGRDVWTMYDPVTSKLLTQRVKSSSDRKEPEPTIGIETFGVS 120
           GV APNGDRL  S P NG GRDVWT+YDPVTSKLLTQRVKSSSD KEPEP+ G ETFG S
Sbjct: 61  GVPAPNGDRLATSGPGNGKGRDVWTIYDPVTSKLLTQRVKSSSDGKEPEPSFGNETFGAS 120

Query: 121 SRNGGGAEDLLNEKASE--------TVRKVGLGGGSICRPNLGKVVGAKKKKSKISWVCS 180
           SRNG GAE+  NEK SE        +VRKVGL GGS+ RPNLGK+VG+KKKKSK+SWVCS
Sbjct: 121 SRNGDGAEEFSNEKTSEFLNEKTSGSVRKVGLEGGSVSRPNLGKIVGSKKKKSKVSWVCS 180

Query: 181 NCGHNEGQWWGTCRSCNMVGTMKQFSEGDDSGGGSRGFEVSENVVRAWLPKQATDVHPLR 240
           +CGH+EGQWWGTCRSC+MVGTMKQFSEGDD+GGGSRGFEVSE +VRAWLPKQATDVHPLR
Sbjct: 181 SCGHSEGQWWGTCRSCDMVGTMKQFSEGDDTGGGSRGFEVSEKMVRAWLPKQATDVHPLR 240

Query: 241 LTDVNRGINTLDWRLPLPGPFGNEVARVLGGGLVPGSLVLVGGDPGVGKSTLLLQIAAIL 300
           LTDVNRGINTLDWRLPLPGPFGNEVARVLGGGLVPGSLVLVGGDPGVGKSTLLLQIAAIL
Sbjct: 241 LTDVNRGINTLDWRLPLPGPFGNEVARVLGGGLVPGSLVLVGGDPGVGKSTLLLQIAAIL 300

Query: 301 AEGRGEGELASVVYVSGEESVEQIGNRADRLNIETENLFLYSSTDVEDIFEKIQPLSPRA 360
           AEGR EG+L SV+YVSGEESVEQIGNRADRLNIETENLFLYSSTDVEDIFEKIQPLSPRA
Sbjct: 301 AEGRDEGDLTSVIYVSGEESVEQIGNRADRLNIETENLFLYSSTDVEDIFEKIQPLSPRA 360

Query: 361 LIIDSIQTVYLQGVAGSAGGIGQVKECTSALLRFAKRTGIPILLIGHVNKSGEVAGPRVL 420
           LI+DSIQTVYLQGVAGSAGGIGQVKECTSALLRFAKRTGIPI LIGHVNKSGEVAGPRVL
Sbjct: 361 LIVDSIQTVYLQGVAGSAGGIGQVKECTSALLRFAKRTGIPIFLIGHVNKSGEVAGPRVL 420

Query: 421 EHIVDVVLYMEGEKCSSHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHNA 480
           EHIVDVVLYMEGEKCSSHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHNA
Sbjct: 421 EHIVDVVLYMEGEKCSSHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHNA 480

Query: 481 NSTSEYLAGLAVAVIMDGTRTFLLEIQALCLARSTVTRHVNGIQQSKADMIISVLMKQAG 540
           N +SEYLAGLAVAVIMDGTRTFLLEIQALCL+RS+V+RHVNGIQQSKADMIISVLMKQAG
Sbjct: 481 NLSSEYLAGLAVAVIMDGTRTFLLEIQALCLSRSSVSRHVNGIQQSKADMIISVLMKQAG 540

Query: 541 LKLQESVIFLNVVSGVTLTETAGDLAIAMAICSSFLEFPIPNDIAFIGEIGLGGELRMVS 600
           LKLQ+SVIFLNVVSGVTLTETAGDLAIAMAICSSFLEFPIPNDIAFIGEIGLGGELRMVS
Sbjct: 541 LKLQDSVIFLNVVSGVTLTETAGDLAIAMAICSSFLEFPIPNDIAFIGEIGLGGELRMVS 600

Query: 601 RMEKRINTVAKLGFKRCVVPKSAENCLGVVELGEMKLIGCRNLKDVINSVFMARDEASSL 655
           RMEKRINTVAKLGFKRCVVPKSAE CLGVVE GEM+LIGCRNLKDVIN VFMARD A S+
Sbjct: 601 RMEKRINTVAKLGFKRCVVPKSAEKCLGVVESGEMRLIGCRNLKDVINDVFMARDGARSV 653

[Close]

BLAST of Lcy02g006460 vs. ExPASy TrEMBL
Match: A0A6J1DHZ5 (uncharacterized protein LOC111021088 OS=Momordica charantia OX=3673 GN=LOC111021088 PE=4 SV=1)

HSP 1 Score: 1140.6 bits (2949), Expect = 0.0e+00
Identity = 586/655 (89.47%), Postives = 604/655 (92.21%), Query Frame = 0


Query: 1   MQLSDMKSLRTIFYSRKHFLISTASSSSTPSLISCRSRLNPNSSLFHFAGRFNSAQLSTI 60
           MQLSDMKSLRTIFYSRKHF            LISCRSRLN NSSLFH+AG FN AQLST 
Sbjct: 1   MQLSDMKSLRTIFYSRKHF------------LISCRSRLNHNSSLFHYAGGFNRAQLSTT 60

Query: 61  GVDAPNGDRLGGSCPANGNGRDVWTMYDPVTSKLLTQRVKSSSDRKEPEPTIGIETFGVS 120
            VDAPNGDR     P N NGR+VWT+YDPVTS+L  QRVKSSSDR EPEP+IGIETFG S
Sbjct: 61  AVDAPNGDR-----PENENGRNVWTIYDPVTSRLHIQRVKSSSDRNEPEPSIGIETFGGS 120

Query: 121 SRNGGGAEDLLNEKASETVRKVGLGGGSICRPNLGKVVGAKKKKSKISWVCSNCGHNEGQ 180
            RN  G EDL  EKA E+ RKVG G GSICRPNLGKVVG KKKKSK+SWVCSNCGHNEGQ
Sbjct: 121 LRNANGVEDLSGEKAPESARKVGFGAGSICRPNLGKVVGVKKKKSKVSWVCSNCGHNEGQ 180

Query: 181 WWGTCRSCNMVGTMKQFSEGDDSGGGSRGFEVSENVVRAWLPKQATDVHPLRLTDVNRGI 240
           WWGTCRSC+MVGTMKQFSEG+DSGGGSRGFEVSENVVRAWLPKQATDVHP RLTDVNRGI
Sbjct: 181 WWGTCRSCDMVGTMKQFSEGEDSGGGSRGFEVSENVVRAWLPKQATDVHPQRLTDVNRGI 240

Query: 241 NTLDWRLPLPGPFGNEVARVLGGGLVPGSLVLVGGDPGVGKSTLLLQIAAILAEGRGEGE 300
           NTLDWRLPLPGPFG+EVARVLGGGLVPGSLVLVGGDPGVGKSTLLLQIAAI+AEGRGEG 
Sbjct: 241 NTLDWRLPLPGPFGDEVARVLGGGLVPGSLVLVGGDPGVGKSTLLLQIAAIIAEGRGEGG 300

Query: 301 LASVVYVSGEESVEQIGNRADRLNIETENLFLYSSTDVEDIFEKIQPLSPRALIIDSIQT 360
            ASVVYVSGEESVEQIGNRADRL IE ENLFLYSSTDVEDIFEKIQPLSPRALIIDSIQT
Sbjct: 301 SASVVYVSGEESVEQIGNRADRLKIEAENLFLYSSTDVEDIFEKIQPLSPRALIIDSIQT 360

Query: 361 VYLQGVAGSAGGIGQVKECTSALLRFAKRTGIPILLIGHVNKSGEVAGPRVLEHIVDVVL 420
           VYLQGVAGSAGGIGQVKECTSALLRFAKRTGIPILLIGHVNKSGEVAGPRVLEHIVDVVL
Sbjct: 361 VYLQGVAGSAGGIGQVKECTSALLRFAKRTGIPILLIGHVNKSGEVAGPRVLEHIVDVVL 420

Query: 421 YMEGEKCSSHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHNANSTSEYLA 480
           YMEGEKCS+HRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHNA+S SEYLA
Sbjct: 421 YMEGEKCSAHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHNADSNSEYLA 480

Query: 481 GLAVAVIMDGTRTFLLEIQALCLARSTVTRHVNGIQQSKADMIISVLMKQAGLKLQESVI 540
           GLAVAVIMDGTRTFLLEIQALCL+RS+VTRHVNGIQQSKADMIISVLMKQAGLKLQESVI
Sbjct: 481 GLAVAVIMDGTRTFLLEIQALCLSRSSVTRHVNGIQQSKADMIISVLMKQAGLKLQESVI 540

Query: 541 FLNVVSGVTLTETAGDLAIAMAICSSFLEFPIPNDIAFIGEIGLGGELRMVSRMEKRINT 600
           FLNVVSGVTLTETAGDLAIAMAICSSFLEFPIPNDIAFIGEIGLGGELR VSRMEKRINT
Sbjct: 541 FLNVVSGVTLTETAGDLAIAMAICSSFLEFPIPNDIAFIGEIGLGGELRTVSRMEKRINT 600

Query: 601 VAKLGFKRCVVPKSAENCLGVVELGEMKLIGCRNLKDVINSVFMARDEASSLQSF 656
           V KLGFKRCVVPKSAENCLGVVELG+MKLIGCRNLKDV+N+VFMARDEA    SF
Sbjct: 601 VVKLGFKRCVVPKSAENCLGVVELGDMKLIGCRNLKDVMNNVFMARDEAMHRHSF 638

[Close]

BLAST of Lcy02g006460 vs. ExPASy TrEMBL
Match: A0A5D3C9C8 (DNA repair protein RadA isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold323G00200 PE=4 SV=1)

HSP 1 Score: 984.2 bits (2543), Expect = 2.7e-283
Identity = 519/657 (79.00%), Postives = 559/657 (85.08%), Query Frame = 0


Query: 1   MQLSDMKSLRTIFYSRKHFLISTASSSSTPSLISCRSRLNPNSSLFHFAGRFNSAQLSTI 60
           MQL DMKSLRTIFYSRKHFLIS++ SS   S ISCRS L+PNSSLFH+A RFN+A LST 
Sbjct: 1   MQLLDMKSLRTIFYSRKHFLISSSFSSYKTSPISCRSSLSPNSSLFHYAPRFNTAHLST- 60

Query: 61  GVDAPNGDRLGGSCPANGNGRDVWTMYDPVTSKLLTQRVKSSSDRKEPEPTIGIETFGVS 120
             DA NGD L GS P N   R+VW++Y  V+SKL TQRV SSSD KEPE ++G+      
Sbjct: 61  --DARNGDPLAGSGPENEKRRNVWSLYGSVSSKLTTQRVGSSSDGKEPEQSLGV------ 120

Query: 121 SRNGGGAEDLLNEKASETVRKVGLGGGSICRPNLGKVVGAKKKKSKISWVCSNCGHNEGQ 180
             NG GAED LNEK SE+VRKVGL     C+ N GK+ G  KKKSK+SWVCS+CGH+EGQ
Sbjct: 121 -LNGDGAEDSLNEKTSESVRKVGLDDKLTCKTNSGKLAGL-KKKSKVSWVCSDCGHSEGQ 180

Query: 181 WWGTCRSCNMVGTMKQFSEGDDSGGGSRGFEVSENVVRAWLPKQATDVHPLRLTDVNRGI 240
           WWGTC+SC  VGTMKQFS G+DS GGS          R WLPKQ T+V+P+RLTDVNRGI
Sbjct: 181 WWGTCQSCRKVGTMKQFSVGNDSEGGS----------RTWLPKQVTNVNPMRLTDVNRGI 240

Query: 241 NTLDWRLPLPGPFGNEVARVLGGGLVPGSLVLVGGDPGVGKSTLLLQIAAILAEGRGEGE 300
           N  DWRLPLPGPFGNEVARVLGGGLVPGSLVL+GGDPGVGKSTLLLQIAAILAEG GEG 
Sbjct: 241 NAQDWRLPLPGPFGNEVARVLGGGLVPGSLVLIGGDPGVGKSTLLLQIAAILAEGCGEGG 300

Query: 301 LASVVYVSGEESVEQIGNRADRLNIETENLFLYSSTDVEDIFEKIQPLSPRALIIDSIQT 360
             SVVYVSGEESVEQIGNRADRL I+TENLFLYSSTDVEDIFEKIQPLSPRALIIDSIQT
Sbjct: 301 SKSVVYVSGEESVEQIGNRADRLKIQTENLFLYSSTDVEDIFEKIQPLSPRALIIDSIQT 360

Query: 361 VYLQGVAGSAGGIGQVKECTSALLRFAKRTGIPILLIGHVNKSGEVAGPRVLEHIVDVVL 420
           VYLQ VAGSAGGI QVKECTSA LR+AK TGIPI LIGHVNKSGEVAGPR+LEHIVDVVL
Sbjct: 361 VYLQEVAGSAGGITQVKECTSAFLRYAKTTGIPIFLIGHVNKSGEVAGPRLLEHIVDVVL 420

Query: 421 YMEGEKCSSHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHNANSTSEYLA 480
           Y+EGEKCS HRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHN N  SE+L 
Sbjct: 421 YVEGEKCSLHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHNGNLNSEHLT 480

Query: 481 GLAVAVIMDGTRTFLLEIQALCLARSTVTRHVNGIQQSKADMIISVLMKQAGLKLQESVI 540
           GLAVAV+MDGT+TFLLEIQALC + S+   HVNGIQ  +ADMIISVLMKQAGLKLQ + I
Sbjct: 481 GLAVAVVMDGTQTFLLEIQALCSSSSSFVTHVNGIQNRRADMIISVLMKQAGLKLQTNAI 540

Query: 541 FLNVVSGVTLTETAGDLAIAMAICSSFLEFPIPNDIAFIGEIGLGGELRMVSRMEKRINT 600
           F+NVVSGVTLTETAGDLAIAMAICSSFLEF IPNDIAFIGEIGLGGELRMV RMEKRINT
Sbjct: 541 FINVVSGVTLTETAGDLAIAMAICSSFLEFNIPNDIAFIGEIGLGGELRMVGRMEKRINT 600

Query: 601 VAKLGFKRCVVPKSAENCLGVVELGEMKLIGCRNLKDVINSVFMARDEAS--SLQSF 656
           VAKLGFKRCVVPKSAENCLGVV LG+MKLIGC NLKDVIN+VFM RDE +  S+ SF
Sbjct: 601 VAKLGFKRCVVPKSAENCLGVVGLGKMKLIGCTNLKDVINNVFMVRDEVTTPSMASF 636

[Close]

BLAST of Lcy02g006460 vs. ExPASy TrEMBL
Match: A0A1S3BHR0 (DNA repair protein RadA isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489983 PE=4 SV=1)

HSP 1 Score: 984.2 bits (2543), Expect = 2.7e-283
Identity = 519/657 (79.00%), Postives = 559/657 (85.08%), Query Frame = 0


Query: 1   MQLSDMKSLRTIFYSRKHFLISTASSSSTPSLISCRSRLNPNSSLFHFAGRFNSAQLSTI 60
           MQL DMKSLRTIFYSRKHFLIS++ SS   S ISCRS L+PNSSLFH+A RFN+A LST 
Sbjct: 1   MQLLDMKSLRTIFYSRKHFLISSSFSSYKTSPISCRSSLSPNSSLFHYAPRFNTAHLST- 60

Query: 61  GVDAPNGDRLGGSCPANGNGRDVWTMYDPVTSKLLTQRVKSSSDRKEPEPTIGIETFGVS 120
             DA NGD L GS P N   R+VW++Y  V+SKL TQRV SSSD KEPE ++G+      
Sbjct: 61  --DARNGDPLAGSGPENEKRRNVWSLYGSVSSKLTTQRVGSSSDGKEPEQSLGV------ 120

Query: 121 SRNGGGAEDLLNEKASETVRKVGLGGGSICRPNLGKVVGAKKKKSKISWVCSNCGHNEGQ 180
             NG GAED LNEK SE+VRKVGL     C+ N GK+ G  KKKSK+SWVCS+CGH+EGQ
Sbjct: 121 -LNGDGAEDSLNEKTSESVRKVGLDDKLTCKTNSGKLAGL-KKKSKVSWVCSDCGHSEGQ 180

Query: 181 WWGTCRSCNMVGTMKQFSEGDDSGGGSRGFEVSENVVRAWLPKQATDVHPLRLTDVNRGI 240
           WWGTC+SC  VGTMKQFS G+DS GGS          R WLPKQ T+V+P+RLTDVNRGI
Sbjct: 181 WWGTCQSCRKVGTMKQFSVGNDSEGGS----------RTWLPKQVTNVNPMRLTDVNRGI 240

Query: 241 NTLDWRLPLPGPFGNEVARVLGGGLVPGSLVLVGGDPGVGKSTLLLQIAAILAEGRGEGE 300
           N  DWRLPLPGPFGNEVARVLGGGLVPGSLVL+GGDPGVGKSTLLLQIAAILAEG GEG 
Sbjct: 241 NAQDWRLPLPGPFGNEVARVLGGGLVPGSLVLIGGDPGVGKSTLLLQIAAILAEGCGEGG 300

Query: 301 LASVVYVSGEESVEQIGNRADRLNIETENLFLYSSTDVEDIFEKIQPLSPRALIIDSIQT 360
             SVVYVSGEESVEQIGNRADRL I+TENLFLYSSTDVEDIFEKIQPLSPRALIIDSIQT
Sbjct: 301 SKSVVYVSGEESVEQIGNRADRLKIQTENLFLYSSTDVEDIFEKIQPLSPRALIIDSIQT 360

Query: 361 VYLQGVAGSAGGIGQVKECTSALLRFAKRTGIPILLIGHVNKSGEVAGPRVLEHIVDVVL 420
           VYLQ VAGSAGGI QVKECTSA LR+AK TGIPI LIGHVNKSGEVAGPR+LEHIVDVVL
Sbjct: 361 VYLQEVAGSAGGITQVKECTSAFLRYAKTTGIPIFLIGHVNKSGEVAGPRLLEHIVDVVL 420

Query: 421 YMEGEKCSSHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHNANSTSEYLA 480
           Y+EGEKCS HRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHN N  SE+L 
Sbjct: 421 YVEGEKCSLHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHNGNLNSEHLT 480

Query: 481 GLAVAVIMDGTRTFLLEIQALCLARSTVTRHVNGIQQSKADMIISVLMKQAGLKLQESVI 540
           GLAVAV+MDGT+TFLLEIQALC + S+   HVNGIQ  +ADMIISVLMKQAGLKLQ + I
Sbjct: 481 GLAVAVVMDGTQTFLLEIQALCSSSSSFVTHVNGIQNRRADMIISVLMKQAGLKLQTNAI 540

Query: 541 FLNVVSGVTLTETAGDLAIAMAICSSFLEFPIPNDIAFIGEIGLGGELRMVSRMEKRINT 600
           F+NVVSGVTLTETAGDLAIAMAICSSFLEF IPNDIAFIGEIGLGGELRMV RMEKRINT
Sbjct: 541 FINVVSGVTLTETAGDLAIAMAICSSFLEFNIPNDIAFIGEIGLGGELRMVGRMEKRINT 600

Query: 601 VAKLGFKRCVVPKSAENCLGVVELGEMKLIGCRNLKDVINSVFMARDEAS--SLQSF 656
           VAKLGFKRCVVPKSAENCLGVV LG+MKLIGC NLKDVIN+VFM RDE +  S+ SF
Sbjct: 601 VAKLGFKRCVVPKSAENCLGVVGLGKMKLIGCTNLKDVINNVFMVRDEVTTPSMASF 636

[Close]

BLAST of Lcy02g006460 vs. NCBI nr
Match: XP_023527681.1 (uncharacterized protein LOC111790828 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1164.8 bits (3012), Expect = 0.0e+00
Identity = 595/657 (90.56%), Postives = 619/657 (94.22%), Query Frame = 0


Query: 1   MQLSDMKSLRTIFYSRKHFLISTASSSSTPSLISCRSRLNPNSSLFHFAGRFNSAQLSTI 60
           MQLSDMKSLRTIF+SRKHFLIS          IS RSRLNPNSSLFH AGRF++AQLSTI
Sbjct: 1   MQLSDMKSLRTIFFSRKHFLISA---------ISSRSRLNPNSSLFHCAGRFHAAQLSTI 60

Query: 61  GVDAPNGDRLGGSCPANGNGRDVWTMYDPVTSKLLTQRVKSSSDRKEPEPTIGIETFGVS 120
           GV APNGDRL  S P NG GRDVWT+YDPVTSKLLTQRVKSSSDRKEPEP+ G ETFG S
Sbjct: 61  GVPAPNGDRLATSGPGNGKGRDVWTIYDPVTSKLLTQRVKSSSDRKEPEPSFGNETFGAS 120

Query: 121 SRNGGGAEDLLNEKASETVRKVGLGGGSICRPNLGKVVGAKKKKSKISWVCSNCGHNEGQ 180
           SRNG GAE+ LNEK S +VRKVGL GGS+ RPNLGK+VG+KKKKSK+SWVC++CGH+EGQ
Sbjct: 121 SRNGDGAEECLNEKTSGSVRKVGLEGGSVSRPNLGKIVGSKKKKSKVSWVCASCGHSEGQ 180

Query: 181 WWGTCRSCNMVGTMKQFSEGDDSGGGSRGFEVSENVVRAWLPKQATDVHPLRLTDVNRGI 240
           WWGTCRSC+MVGTMKQFSEGDD+GGGSRGFEVSENVVRAWLPKQATDVHPLRLTDVNRGI
Sbjct: 181 WWGTCRSCDMVGTMKQFSEGDDTGGGSRGFEVSENVVRAWLPKQATDVHPLRLTDVNRGI 240

Query: 241 NTLDWRLPLPGPFGNEVARVLGGGLVPGSLVLVGGDPGVGKSTLLLQIAAILAEGRGEGE 300
           NTLDWRLPLPGPFGNEVARVLGGGLVPGSLVLVGGDPGVGKSTLLLQIAAILAEGRGE +
Sbjct: 241 NTLDWRLPLPGPFGNEVARVLGGGLVPGSLVLVGGDPGVGKSTLLLQIAAILAEGRGESD 300

Query: 301 LASVVYVSGEESVEQIGNRADRLNIETENLFLYSSTDVEDIFEKIQPLSPRALIIDSIQT 360
           L SV+YVSGEESVEQIGNRADRLNIETENLFLYSSTDVEDIFEKIQPLSPRALIIDSIQT
Sbjct: 301 LTSVIYVSGEESVEQIGNRADRLNIETENLFLYSSTDVEDIFEKIQPLSPRALIIDSIQT 360

Query: 361 VYLQGVAGSAGGIGQVKECTSALLRFAKRTGIPILLIGHVNKSGEVAGPRVLEHIVDVVL 420
           VYLQGVAGSAGGIGQVKECTSALLRFAKRT IPILLIGHVNKSGEVAGPRVLEHIVDVVL
Sbjct: 361 VYLQGVAGSAGGIGQVKECTSALLRFAKRTSIPILLIGHVNKSGEVAGPRVLEHIVDVVL 420

Query: 421 YMEGEKCSSHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHNANSTSEYLA 480
           YMEGEKCSSHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHNANS SEYLA
Sbjct: 421 YMEGEKCSSHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHNANSNSEYLA 480

Query: 481 GLAVAVIMDGTRTFLLEIQALCLARSTVTRHVNGIQQSKADMIISVLMKQAGLKLQESVI 540
           GLAVAVIMDGTRTFLLEIQALCL+RS+V+RHVNGIQQSKADMIISVLMKQAGLKLQ+SVI
Sbjct: 481 GLAVAVIMDGTRTFLLEIQALCLSRSSVSRHVNGIQQSKADMIISVLMKQAGLKLQDSVI 540

Query: 541 FLNVVSGVTLTETAGDLAIAMAICSSFLEFPIPNDIAFIGEIGLGGELRMVSRMEKRINT 600
           FLNVVSGVTLTETAGDLAIAMAICSSFLEFPIPNDIAFIGEIGLGGELRMVSRMEKRINT
Sbjct: 541 FLNVVSGVTLTETAGDLAIAMAICSSFLEFPIPNDIAFIGEIGLGGELRMVSRMEKRINT 600

Query: 601 VAKLGFKRCVVPKSAENCLGVVELGEMKLIGCRNLKDVINSVFMARDEASSLQSFDG 658
           VAKLGFKRCVVPKSAE CLGVVELGE +LIGC NLKDVIN VFMARD A S+QSF G
Sbjct: 601 VAKLGFKRCVVPKSAEKCLGVVELGETRLIGCSNLKDVINDVFMARDGARSVQSFVG 648

[Close]

BLAST of Lcy02g006460 vs. NCBI nr
Match: XP_022980476.1 (uncharacterized protein LOC111479856 [Cucurbita maxima])

HSP 1 Score: 1164.1 bits (3010), Expect = 0.0e+00
Identity = 593/657 (90.26%), Postives = 622/657 (94.67%), Query Frame = 0


Query: 1   MQLSDMKSLRTIFYSRKHFLISTASSSSTPSLISCRSRLNPNSSLFHFAGRFNSAQLSTI 60
           MQLSDMKSLRTIF+SRKHFLIST SSSSTPS IS RSRLNP+SSLFH AGRFN+AQLST 
Sbjct: 1   MQLSDMKSLRTIFFSRKHFLISTISSSSTPSPISSRSRLNPSSSLFHCAGRFNAAQLSTT 60

Query: 61  GVDAPNGDRLGGSCPANGNGRDVWTMYDPVTSKLLTQRVKSSSDRKEPEPTIGIETFGVS 120
            V APNG+ L  S P NG  R VWT+YDPVTSKLLTQRVKSSSDRK+PEP+ G ETFG S
Sbjct: 61  DVPAPNGNCLAASGPGNGKDRGVWTIYDPVTSKLLTQRVKSSSDRKDPEPSFGNETFGAS 120

Query: 121 SRNGGGAEDLLNEKASETVRKVGLGGGSICRPNLGKVVGAKKKKSKISWVCSNCGHNEGQ 180
           SRNG G E+ LNEK SE+VRKVGL GGS+ RP LGK+VG+KKKKSK+SWVCS+CGH+EGQ
Sbjct: 121 SRNGDGTEEFLNEKTSESVRKVGLEGGSVSRPKLGKIVGSKKKKSKVSWVCSSCGHSEGQ 180

Query: 181 WWGTCRSCNMVGTMKQFSEGDDSGGGSRGFEVSENVVRAWLPKQATDVHPLRLTDVNRGI 240
           WWGTCRSC+MVGTMKQF+EGDD+GGGSRGFEVSENVVRAWLPKQATDVHPLRLTDVNRGI
Sbjct: 181 WWGTCRSCDMVGTMKQFTEGDDTGGGSRGFEVSENVVRAWLPKQATDVHPLRLTDVNRGI 240

Query: 241 NTLDWRLPLPGPFGNEVARVLGGGLVPGSLVLVGGDPGVGKSTLLLQIAAILAEGRGEGE 300
           NTLDWRLPLPGPFGNEVARVLGGGLVPGSLVLVGGDPGVGKSTLLLQIAAILAE  GEG+
Sbjct: 241 NTLDWRLPLPGPFGNEVARVLGGGLVPGSLVLVGGDPGVGKSTLLLQIAAILAEACGEGD 300

Query: 301 LASVVYVSGEESVEQIGNRADRLNIETENLFLYSSTDVEDIFEKIQPLSPRALIIDSIQT 360
           L SV+YVSGEESV+QIGNRADRLNIETENLFLYSSTDVEDIFEKIQPLSPRALIIDSIQT
Sbjct: 301 LTSVIYVSGEESVDQIGNRADRLNIETENLFLYSSTDVEDIFEKIQPLSPRALIIDSIQT 360

Query: 361 VYLQGVAGSAGGIGQVKECTSALLRFAKRTGIPILLIGHVNKSGEVAGPRVLEHIVDVVL 420
           VYLQGVAGSAGGIGQVKECTSALLRFAKRTGIPILLIGHVNKSGEVAGPRVLEHIVDVVL
Sbjct: 361 VYLQGVAGSAGGIGQVKECTSALLRFAKRTGIPILLIGHVNKSGEVAGPRVLEHIVDVVL 420

Query: 421 YMEGEKCSSHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHNANSTSEYLA 480
           YMEGEKCSSHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRD+NANS SEYLA
Sbjct: 421 YMEGEKCSSHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDNNANSNSEYLA 480

Query: 481 GLAVAVIMDGTRTFLLEIQALCLARSTVTRHVNGIQQSKADMIISVLMKQAGLKLQESVI 540
           GLAVAVIMDGTRTFLLEIQALCL+RS+V+RHVNGIQQSKADMIISVLMKQAGLKLQ+SVI
Sbjct: 481 GLAVAVIMDGTRTFLLEIQALCLSRSSVSRHVNGIQQSKADMIISVLMKQAGLKLQDSVI 540

Query: 541 FLNVVSGVTLTETAGDLAIAMAICSSFLEFPIPNDIAFIGEIGLGGELRMVSRMEKRINT 600
           FLNVVSGVTLTETAGDLAIAMAICSSFLEFPIPNDIAFIGEIGLGGELRMVSRMEKRINT
Sbjct: 541 FLNVVSGVTLTETAGDLAIAMAICSSFLEFPIPNDIAFIGEIGLGGELRMVSRMEKRINT 600

Query: 601 VAKLGFKRCVVPKSAENCLGVVELGEMKLIGCRNLKDVINSVFMARDEASSLQSFDG 658
           V+KLGFKRCVVPKSAE CLGVVELGE +LIGCRNLKDVIN VFMARD A S+QSF G
Sbjct: 601 VSKLGFKRCVVPKSAEKCLGVVELGETRLIGCRNLKDVINDVFMARDGARSVQSFVG 657

[Close]

BLAST of Lcy02g006460 vs. NCBI nr
Match: XP_038906306.1 (DNA repair protein RadA [Benincasa hispida])

HSP 1 Score: 1154.8 bits (2986), Expect = 0.0e+00
Identity = 588/657 (89.50%), Postives = 617/657 (93.91%), Query Frame = 0


Query: 1   MQLSDMKSLRTIFYSRKHFLISTASSSSTPSLISCRSRLNPNSSLFHFAGRFNSAQLSTI 60
           MQL DMKS RTIFYSRKHFLIS  SSS T S IS RSRLNPNSSLFH+AGRFN+AQLSTI
Sbjct: 1   MQLLDMKSFRTIFYSRKHFLISATSSSYTQSPISSRSRLNPNSSLFHYAGRFNTAQLSTI 60

Query: 61  GVDAPNGDRLGGSCPANGNGRDVWTMYDPVTSKLLTQRVKSSSDRKEPEPTIGIETFGVS 120
           GVDAPNGD +GGS   NG  R VWT YDPVTS+LLTQRV+S SDRKEPEP+IGI+TFG S
Sbjct: 61  GVDAPNGDPIGGSGSENGKDRRVWTTYDPVTSRLLTQRVRSGSDRKEPEPSIGIQTFGAS 120

Query: 121 SRNGGGAEDLLNEKASETVRKVGLGGGSICRPNLGKVVGAKKKKSKISWVCSNCGHNEGQ 180
           SRNG GA+D LNEK SE+V KVGLG GS+CRPNLGKVVG+KKKKSK+SWVCSNCGHNEGQ
Sbjct: 121 SRNGDGAKDFLNEKTSESVGKVGLGDGSVCRPNLGKVVGSKKKKSKVSWVCSNCGHNEGQ 180

Query: 181 WWGTCRSCNMVGTMKQFSEGDDSGGGSRGFEVSENVVRAWLPKQATDVHPLRLTDVNRGI 240
           WWGTCRSC+MVGTMKQFSEGDDSGGGSRGFEVSENVVRAWLPKQATD +PLRLTDVNRGI
Sbjct: 181 WWGTCRSCDMVGTMKQFSEGDDSGGGSRGFEVSENVVRAWLPKQATDGNPLRLTDVNRGI 240

Query: 241 NTLDWRLPLPGPFGNEVARVLGGGLVPGSLVLVGGDPGVGKSTLLLQIAAILAEGRGEGE 300
           NT DWRLPLPGPFG+EVARVLGGGLVPGSLVL+GGDPGVGKSTLLLQIAA+LAEG G+GE
Sbjct: 241 NTRDWRLPLPGPFGSEVARVLGGGLVPGSLVLIGGDPGVGKSTLLLQIAALLAEGCGQGE 300

Query: 301 LASVVYVSGEESVEQIGNRADRLNIETENLFLYSSTDVEDIFEKIQPLSPRALIIDSIQT 360
           L SVVYVSGEESVEQIGNRADRLNIETENL+LYSSTDVEDIFEKIQP+SPRALIIDSIQT
Sbjct: 301 LTSVVYVSGEESVEQIGNRADRLNIETENLYLYSSTDVEDIFEKIQPISPRALIIDSIQT 360

Query: 361 VYLQGVAGSAGGIGQVKECTSALLRFAKRTGIPILLIGHVNKSGEVAGPRVLEHIVDVVL 420
           VYLQGVAGSAGGIGQVKECTSALLRFAKRTGIPILLIGHVNKSGEVAGPRVLEHIVDVVL
Sbjct: 361 VYLQGVAGSAGGIGQVKECTSALLRFAKRTGIPILLIGHVNKSGEVAGPRVLEHIVDVVL 420

Query: 421 YMEGEKCSSHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHNANSTSEYLA 480
           YMEG+KC SHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHNANS SEYLA
Sbjct: 421 YMEGDKCLSHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHNANSNSEYLA 480

Query: 481 GLAVAVIMDGTRTFLLEIQALCLARSTVTRHVNGIQQSKADMIISVLMKQAGLKLQESVI 540
           GLAVAVIMDGTRTFLLEIQALCL+RS+VTR VNGI QSKAD+IISVLMKQAGLKLQES I
Sbjct: 481 GLAVAVIMDGTRTFLLEIQALCLSRSSVTRQVNGIHQSKADLIISVLMKQAGLKLQESGI 540

Query: 541 FLNVVSGVTLTETAGDLAIAMAICSSFLEFPIPNDIAFIGEIGLGGELRMVSRMEKRINT 600
           FLNVVSG+TLTETAGDLAIAMAICSSFLEFPIPNDI FIGEIGLGGELRMVSRMEKRINT
Sbjct: 541 FLNVVSGLTLTETAGDLAIAMAICSSFLEFPIPNDIVFIGEIGLGGELRMVSRMEKRINT 600

Query: 601 VAKLGFKRCVVPKSAENCLGVVELGEMKLIGCRNLKDVINSVFMARDEASSLQSFDG 658
           VAKLGFKRCVVPKSAENCLG+VELGEMKLI CR+LKDVIN+VF+A  E S LQS  G
Sbjct: 601 VAKLGFKRCVVPKSAENCLGLVELGEMKLICCRHLKDVINNVFIAGGEVSGLQSCVG 657

[Close]

BLAST of Lcy02g006460 vs. NCBI nr
Match: XP_022956185.1 (uncharacterized protein LOC111457955 [Cucurbita moschata])

HSP 1 Score: 1149.0 bits (2971), Expect = 0.0e+00
Identity = 589/662 (88.97%), Postives = 616/662 (93.05%), Query Frame = 0


Query: 1   MQLSDMKSLRTIFYSRKHFLISTASSSSTPSLISCRSRLNPNSSLFHFAGRFNSAQLSTI 60
           MQ SDMKSLRTIF+SRKHFLIST         IS RSRLNPNSSLFH AGRF++A+LSTI
Sbjct: 1   MQFSDMKSLRTIFFSRKHFLIST---------ISSRSRLNPNSSLFHCAGRFHAAKLSTI 60

Query: 61  GVDAPNGDRLGGSCPANGNGRDVWTMYDPVTSKLLTQRVKSSSDRKEPEPTIGIETFGVS 120
           GV APNGDRL  S P NG GRDVWT+YDPVTSKLLTQRVKSSSD KEPEP+ G ETFG S
Sbjct: 61  GVPAPNGDRLATSGPGNGKGRDVWTIYDPVTSKLLTQRVKSSSDGKEPEPSFGNETFGAS 120

Query: 121 SRNGGGAEDLLNEKASE--------TVRKVGLGGGSICRPNLGKVVGAKKKKSKISWVCS 180
           SRNG GAE+  NEK SE        +VRKVGL GGS+ RPNLGK+VG+KKKKSK+SWVCS
Sbjct: 121 SRNGDGAEEFSNEKTSEFLNEKTSGSVRKVGLEGGSVSRPNLGKIVGSKKKKSKVSWVCS 180

Query: 181 NCGHNEGQWWGTCRSCNMVGTMKQFSEGDDSGGGSRGFEVSENVVRAWLPKQATDVHPLR 240
           +CGH+EGQWWGTCRSC+MVGTMKQFSEGDD+GGGSRGFEVSE +VRAWLPKQATDVHPLR
Sbjct: 181 SCGHSEGQWWGTCRSCDMVGTMKQFSEGDDTGGGSRGFEVSEKMVRAWLPKQATDVHPLR 240

Query: 241 LTDVNRGINTLDWRLPLPGPFGNEVARVLGGGLVPGSLVLVGGDPGVGKSTLLLQIAAIL 300
           LTDVNRGINTLDWRLPLPGPFGNEVARVLGGGLVPGSLVLVGGDPGVGKSTLLLQIAAIL
Sbjct: 241 LTDVNRGINTLDWRLPLPGPFGNEVARVLGGGLVPGSLVLVGGDPGVGKSTLLLQIAAIL 300

Query: 301 AEGRGEGELASVVYVSGEESVEQIGNRADRLNIETENLFLYSSTDVEDIFEKIQPLSPRA 360
           AEGR EG+L SV+YVSGEESVEQIGNRADRLNIETENLFLYSSTDVEDIFEKIQPLSPRA
Sbjct: 301 AEGRDEGDLTSVIYVSGEESVEQIGNRADRLNIETENLFLYSSTDVEDIFEKIQPLSPRA 360

Query: 361 LIIDSIQTVYLQGVAGSAGGIGQVKECTSALLRFAKRTGIPILLIGHVNKSGEVAGPRVL 420
           LI+DSIQTVYLQGVAGSAGGIGQVKECTSALLRFAKRTGIPI LIGHVNKSGEVAGPRVL
Sbjct: 361 LIVDSIQTVYLQGVAGSAGGIGQVKECTSALLRFAKRTGIPIFLIGHVNKSGEVAGPRVL 420

Query: 421 EHIVDVVLYMEGEKCSSHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHNA 480
           EHIVDVVLYMEGEKCSSHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHNA
Sbjct: 421 EHIVDVVLYMEGEKCSSHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHNA 480

Query: 481 NSTSEYLAGLAVAVIMDGTRTFLLEIQALCLARSTVTRHVNGIQQSKADMIISVLMKQAG 540
           N +SEYLAGLAVAVIMDGTRTFLLEIQALCL+RS+V+RHVNGIQQSKADMIISVLMKQAG
Sbjct: 481 NLSSEYLAGLAVAVIMDGTRTFLLEIQALCLSRSSVSRHVNGIQQSKADMIISVLMKQAG 540

Query: 541 LKLQESVIFLNVVSGVTLTETAGDLAIAMAICSSFLEFPIPNDIAFIGEIGLGGELRMVS 600
           LKLQ+SVIFLNVVSGVTLTETAGDLAIAMAICSSFLEFPIPNDIAFIGEIGLGGELRMVS
Sbjct: 541 LKLQDSVIFLNVVSGVTLTETAGDLAIAMAICSSFLEFPIPNDIAFIGEIGLGGELRMVS 600

Query: 601 RMEKRINTVAKLGFKRCVVPKSAENCLGVVELGEMKLIGCRNLKDVINSVFMARDEASSL 655
           RMEKRINTVAKLGFKRCVVPKSAE CLGVVE GEM+LIGCRNLKDVIN VFMARD A S+
Sbjct: 601 RMEKRINTVAKLGFKRCVVPKSAEKCLGVVESGEMRLIGCRNLKDVINDVFMARDGARSV 653

[Close]

BLAST of Lcy02g006460 vs. NCBI nr
Match: XP_022153628.1 (uncharacterized protein LOC111021088 [Momordica charantia])

HSP 1 Score: 1140.6 bits (2949), Expect = 0.0e+00
Identity = 586/655 (89.47%), Postives = 604/655 (92.21%), Query Frame = 0


Query: 1   MQLSDMKSLRTIFYSRKHFLISTASSSSTPSLISCRSRLNPNSSLFHFAGRFNSAQLSTI 60
           MQLSDMKSLRTIFYSRKHF            LISCRSRLN NSSLFH+AG FN AQLST 
Sbjct: 1   MQLSDMKSLRTIFYSRKHF------------LISCRSRLNHNSSLFHYAGGFNRAQLSTT 60

Query: 61  GVDAPNGDRLGGSCPANGNGRDVWTMYDPVTSKLLTQRVKSSSDRKEPEPTIGIETFGVS 120
            VDAPNGDR     P N NGR+VWT+YDPVTS+L  QRVKSSSDR EPEP+IGIETFG S
Sbjct: 61  AVDAPNGDR-----PENENGRNVWTIYDPVTSRLHIQRVKSSSDRNEPEPSIGIETFGGS 120

Query: 121 SRNGGGAEDLLNEKASETVRKVGLGGGSICRPNLGKVVGAKKKKSKISWVCSNCGHNEGQ 180
            RN  G EDL  EKA E+ RKVG G GSICRPNLGKVVG KKKKSK+SWVCSNCGHNEGQ
Sbjct: 121 LRNANGVEDLSGEKAPESARKVGFGAGSICRPNLGKVVGVKKKKSKVSWVCSNCGHNEGQ 180

Query: 181 WWGTCRSCNMVGTMKQFSEGDDSGGGSRGFEVSENVVRAWLPKQATDVHPLRLTDVNRGI 240
           WWGTCRSC+MVGTMKQFSEG+DSGGGSRGFEVSENVVRAWLPKQATDVHP RLTDVNRGI
Sbjct: 181 WWGTCRSCDMVGTMKQFSEGEDSGGGSRGFEVSENVVRAWLPKQATDVHPQRLTDVNRGI 240

Query: 241 NTLDWRLPLPGPFGNEVARVLGGGLVPGSLVLVGGDPGVGKSTLLLQIAAILAEGRGEGE 300
           NTLDWRLPLPGPFG+EVARVLGGGLVPGSLVLVGGDPGVGKSTLLLQIAAI+AEGRGEG 
Sbjct: 241 NTLDWRLPLPGPFGDEVARVLGGGLVPGSLVLVGGDPGVGKSTLLLQIAAIIAEGRGEGG 300

Query: 301 LASVVYVSGEESVEQIGNRADRLNIETENLFLYSSTDVEDIFEKIQPLSPRALIIDSIQT 360
            ASVVYVSGEESVEQIGNRADRL IE ENLFLYSSTDVEDIFEKIQPLSPRALIIDSIQT
Sbjct: 301 SASVVYVSGEESVEQIGNRADRLKIEAENLFLYSSTDVEDIFEKIQPLSPRALIIDSIQT 360

Query: 361 VYLQGVAGSAGGIGQVKECTSALLRFAKRTGIPILLIGHVNKSGEVAGPRVLEHIVDVVL 420
           VYLQGVAGSAGGIGQVKECTSALLRFAKRTGIPILLIGHVNKSGEVAGPRVLEHIVDVVL
Sbjct: 361 VYLQGVAGSAGGIGQVKECTSALLRFAKRTGIPILLIGHVNKSGEVAGPRVLEHIVDVVL 420

Query: 421 YMEGEKCSSHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHNANSTSEYLA 480
           YMEGEKCS+HRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHNA+S SEYLA
Sbjct: 421 YMEGEKCSAHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHNADSNSEYLA 480

Query: 481 GLAVAVIMDGTRTFLLEIQALCLARSTVTRHVNGIQQSKADMIISVLMKQAGLKLQESVI 540
           GLAVAVIMDGTRTFLLEIQALCL+RS+VTRHVNGIQQSKADMIISVLMKQAGLKLQESVI
Sbjct: 481 GLAVAVIMDGTRTFLLEIQALCLSRSSVTRHVNGIQQSKADMIISVLMKQAGLKLQESVI 540

Query: 541 FLNVVSGVTLTETAGDLAIAMAICSSFLEFPIPNDIAFIGEIGLGGELRMVSRMEKRINT 600
           FLNVVSGVTLTETAGDLAIAMAICSSFLEFPIPNDIAFIGEIGLGGELR VSRMEKRINT
Sbjct: 541 FLNVVSGVTLTETAGDLAIAMAICSSFLEFPIPNDIAFIGEIGLGGELRTVSRMEKRINT 600

Query: 601 VAKLGFKRCVVPKSAENCLGVVELGEMKLIGCRNLKDVINSVFMARDEASSLQSF 656
           V KLGFKRCVVPKSAENCLGVVELG+MKLIGCRNLKDV+N+VFMARDEA    SF
Sbjct: 601 VVKLGFKRCVVPKSAENCLGVVELGDMKLIGCRNLKDVMNNVFMARDEAMHRHSF 638

[Close]

BLAST of Lcy02g006460 vs. TAIR 10
Match: AT5G50340.1 (ATP-dependent peptidases;nucleotide binding;serine-type endopeptidases;DNA helicases;ATP binding;damaged DNA binding;nucleoside-triphosphatases )

HSP 1 Score: 664.1 bits (1712), Expect = 1.2e-190
Identity = 346/563 (61.46%), Postives = 431/563 (76.55%), Query Frame = 0


Query: 88  DPVTSKLLTQRVKSSSDRKEPEPTIGIETFGVSSRNGGGAEDLLNEKASETVRKVGLGGG 147
           +PVT  +   R +    R    P   +     S+++     +  + K   +  K    G 
Sbjct: 26  NPVTVPISPVRFRLRLRRLSSSPVASVFDLHSSNQDANSNREDKDTKIGFSDDKSRKSGS 85

Query: 148 SICRPNLGKVV--GAKKKKSKISWVCSNCGHNEGQWWGTCRSCNMVGTMKQFSEGDDS-- 207
           +  R N G+VV   +KK KSK  WVC +CGH+EGQWWG+CR+C+ VGTMK+FSEG +S  
Sbjct: 86  NPPRWNPGEVVMNKSKKGKSKTVWVCESCGHSEGQWWGSCRACHKVGTMKRFSEGSESSA 145

Query: 208 ---GGGSRGFEVSENVVRAWLPKQATDVHPLRLTDVNRGINTLDWRLPLPGPFGNEVARV 267
              GG   G   +E    +WLP+QAT V P RLTDV  GI    WR+ LPG FGNEVARV
Sbjct: 146 SGGGGNGTGLGFTEGKGLSWLPEQAT-VQPHRLTDVIHGITQQQWRISLPGLFGNEVARV 205

Query: 268 LGGGLVPGSLVLVGGDPGVGKSTLLLQIAAILAEGRGEGELASVVYVSGEESVEQIGNRA 327
           LGGGL PGSL+L+GGDPG+GKSTLLLQIA+I+AEG    E A V+Y+SGEESVEQIG+RA
Sbjct: 206 LGGGLAPGSLILIGGDPGIGKSTLLLQIASIIAEGSELAEPAPVLYISGEESVEQIGSRA 265

Query: 328 DRLNIETENLFLYSSTDVEDIFEKIQPLSPRALIIDSIQTVYLQGVAGSAGGIGQVKECT 387
           DR+ I+TE L+L+SS+D++DI  K   LSPRALIIDSIQTVYL+ V GSAGG+ QVKECT
Sbjct: 266 DRMRIQTEELYLFSSSDLQDILNKAHRLSPRALIIDSIQTVYLKDVTGSAGGLTQVKECT 325

Query: 388 SALLRFAKRTGIPILLIGHVNKSGEVAGPRVLEHIVDVVLYMEGEKCSSHRLLRPVKNRF 447
           S LLRFAK++ IP+ L+GHV K+G++AGPRVLEHIVDVVLY+EGE+ S++RLLR VKNRF
Sbjct: 326 STLLRFAKKSNIPVFLVGHVTKAGDIAGPRVLEHIVDVVLYLEGEESSTYRLLRSVKNRF 385

Query: 448 GSTDELGVFEMLPSGLEVVSNPSEMFRRDHNANSTSEYLAGLAVAVIMDGTRTFLLEIQA 507
           GSTDELGVFEM  SGLEVVSNPS ++    N +  S+ LAGLAVAV+MDG+R+FL+E+QA
Sbjct: 386 GSTDELGVFEMANSGLEVVSNPSGIYLSQQNPD--SDVLAGLAVAVVMDGSRSFLIEVQA 445

Query: 508 LCLARSTVTRHVNGIQQSKADMIISVLMKQAGLKLQESVIFLNVVSGVTLTETAGDLAIA 567
           LC   STV+RHVNG+Q S+ADMII+VLMKQAGL++QE+ IFLNV +G+ L+ETAGDLAIA
Sbjct: 446 LCSPGSTVSRHVNGVQASRADMIIAVLMKQAGLRIQENGIFLNVANGMALSETAGDLAIA 505

Query: 568 MAICSSFLEFPIPNDIAFIGEIGLGGELRMVSRMEKRINTVAKLGFKRCVVPKSAENCLG 627
            AICSSFLEFPIP+ +AFIGEIGLGGE+R V RMEKR++TVAKLGF +CVVPKS E  L 
Sbjct: 506 AAICSSFLEFPIPHGVAFIGEIGLGGEVRTVPRMEKRVSTVAKLGFNKCVVPKSVEESLK 565

Query: 628 VVELGEMKLIGCRNLKDVINSVF 644
            + L E+++IGC+NLK++IN+VF
Sbjct: 566 ALSLKEIEIIGCKNLKELINAVF 585

The following BLAST results are available for this feature:

BLAST of Lcy02g006460 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P37572	1.3e-96	42.62	DNA repair protein RadA OS=Bacillus subtilis (strain 168) OX=224308 GN=radA PE=1...	[more]
Q9KGG1	3.1e-95	42.08	DNA repair protein RadA OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 ...	[more]
Q92F42	2.9e-93	41.04	DNA repair protein RadA OS=Listeria innocua serovar 6a (strain ATCC BAA-680 / CL...	[more]
Q48761	3.2e-92	42.45	DNA repair protein RadA OS=Listeria monocytogenes serovar 1/2a (strain ATCC BAA-...	[more]
P74391	2.0e-89	38.98	DNA repair protein RadA OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=11117...	[more]

BLAST of Lcy02g006460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ITP4	0.0e+00	90.26	uncharacterized protein LOC111479856 OS=Cucurbita maxima OX=3661 GN=LOC111479856...	[more]
A0A6J1GX44	0.0e+00	88.97	uncharacterized protein LOC111457955 OS=Cucurbita moschata OX=3662 GN=LOC1114579...	[more]
A0A6J1DHZ5	0.0e+00	89.47	uncharacterized protein LOC111021088 OS=Momordica charantia OX=3673 GN=LOC111021...	[more]
A0A5D3C9C8	2.7e-283	79.00	DNA repair protein RadA isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3BHR0	2.7e-283	79.00	DNA repair protein RadA isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489983 PE=4 ...	[more]

BLAST of Lcy02g006460 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023527681.1	0.0e+00	90.56	uncharacterized protein LOC111790828 [Cucurbita pepo subsp. pepo]	[more]
XP_022980476.1	0.0e+00	90.26	uncharacterized protein LOC111479856 [Cucurbita maxima]	[more]
XP_038906306.1	0.0e+00	89.50	DNA repair protein RadA [Benincasa hispida]	[more]
XP_022956185.1	0.0e+00	88.97	uncharacterized protein LOC111457955 [Cucurbita moschata]	[more]
XP_022153628.1	0.0e+00	89.47	uncharacterized protein LOC111021088 [Momordica charantia]	[more]

BLAST of Lcy02g006460 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G50340.1	1.2e-190	61.46	ATP-dependent peptidases;nucleotide binding;serine-type endopeptidases;DNA helic...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR01874	DNAREPAIRADA	coord: 171..195 score: 34.56 coord: 259..287 score: 78.69 coord: 356..380 score: 42.15 coord: 507..530 score: 27.46 coord: 430..456 score: 62.01 coord: 395..423 score: 61.89
None	No IPR available	PFAM	PF13541	ChlI	coord: 524..614 e-value: 2.1E-9 score: 37.3
None	No IPR available	PFAM	PF13481	AAA_25	coord: 261..404 e-value: 7.3E-19 score: 68.0
None	No IPR available	PANTHER	PTHR32472:SF10	DNA REPAIR PROTEIN RADA-LIKE PROTEIN	coord: 164..644
None	No IPR available	PANTHER	PTHR32472	DNA REPAIR PROTEIN RADA	coord: 164..644
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..35 score: 5.0
IPR003593	AAA+ ATPase domain	SMART	SM00382	AAA_5	coord: 267..426 e-value: 1.5E-11 score: 54.4
IPR014721	Ribosomal protein S5 domain 2-type fold, subgroup	GENE3D	3.30.230.10		coord: 478..655 e-value: 1.9E-22 score: 81.9
IPR004504	DNA repair protein RadA	TIGRFAM	TIGR00416	TIGR00416	coord: 164..638 e-value: 1.1E-136 score: 454.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 255..459 e-value: 7.5E-38 score: 132.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 259..452
IPR020588	DNA recombination and repair protein RecA-like, ATP-binding domain	PROSITE	PS50162	RECA_2	coord: 247..400 score: 23.551888
IPR020568	Ribosomal protein S5 domain 2-type fold	SUPERFAMILY	54211	Ribosomal protein S5 domain 2-like	coord: 437..642

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy02g006460.1	Lcy02g006460.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000725	recombinational repair
biological_process	GO:0006281	DNA repair
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0008094	ATP-dependent activity, acting on DNA
molecular_function	GO:0003684	damaged DNA binding
molecular_function	GO:0003677	DNA binding