Lcy02g006400 (gene) Sponge gourd (P93075) v1

Overview
NameLcy02g006400
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionOxidative stress 3, putative isoform 2
LocationChr02: 8406638 .. 8407507 (-)
RNA-Seq ExpressionLcy02g006400
SyntenyLcy02g006400
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTGGAATTCAAAGACAATTGCTTCATCAACCATGTTCTGTTGCATTATGCCTAGAGTTCCATGAAGAATTGGAAGATCATTGGGTTAGCAAGGGAGGTGATCGCTACAACGCTGCGACTTCGGCATCTTCATTTGAAGATTCATCGATTTCGAGCGAATCGGTTTCTTCGTTGGACTTGGCAGATGATGCGTGTTCATCGACTTCGAATGCTTCATCTCAATCTAATGGACCATTGGAGGATTTCACAGAGCTTCTTGCTCAACTGCCAATCAAGTAAGTGTTGATGAGATTGCTTGAAATTTCCTTTCCTTCGCGATGAATGAATAGATTCATAAATAAATTATATTCTAAATGAAAGCATCAAGCTAAGCTAGGTTTCAATCTGAACATAGTTCAATTGGTTAAGGTTTAAAAGGTTCGAATTCCCACCCTCACATATTGTTAAACTTGAAAACATCAAGCTAGGTCTTCCCTCGACTACATCCTGCAATTATGAATTCAAATCTACAAGCTAAATATGACTTCTTAAACTACTGTTGGATCAATTTCTAATAGCAATTACTCTATGTGCAGGAGAGGGCTATCCATGTTCTATCAGGGAAAATCTCAGTCTTTTACATCTCTATCAAGTGTAAAGAGCATAGAAGACCTTCCAAAGAAGGAAAATCCTTACAGCAGGAGACTGAATGCATGTAAGAGCTATGCAGGTGGCTTGGACACCCACAAGTCTTCTTATGCTCTTCCAAAGGCTCCAACTTTTAAGAAGGCATCAAGAAGTTCTCTGTCTTTTGTCCAAGTTAGGAGAGGCAGTTCATTGGCTGGTTGTAGACCTCCTTCCATTCCTGTATATGATGAGAGCTTTTGA

mRNA sequence

ATGGGTGGAATTCAAAGACAATTGCTTCATCAACCATGTTCTGTTGCATTATGCCTAGAGTTCCATGAAGAATTGGAAGATCATTGGGTTAGCAAGGGAGGTGATCGCTACAACGCTGCGACTTCGGCATCTTCATTTGAAGATTCATCGATTTCGAGCGAATCGGTTTCTTCGTTGGACTTGGCAGATGATGCGTGTTCATCGACTTCGAATGCTTCATCTCAATCTAATGGACCATTGGAGGATTTCACAGAGCTTCTTGCTCAACTGCCAATCAAGAGAGGGCTATCCATGTTCTATCAGGGAAAATCTCAGTCTTTTACATCTCTATCAAGTGTAAAGAGCATAGAAGACCTTCCAAAGAAGGAAAATCCTTACAGCAGGAGACTGAATGCATGTAAGAGCTATGCAGGTGGCTTGGACACCCACAAGTCTTCTTATGCTCTTCCAAAGGCTCCAACTTTTAAGAAGGCATCAAGAAGTTCTCTGTCTTTTGTCCAAGTTAGGAGAGGCAGTTCATTGGCTGGTTGTAGACCTCCTTCCATTCCTGTATATGATGAGAGCTTTTGA

Coding sequence (CDS)

ATGGGTGGAATTCAAAGACAATTGCTTCATCAACCATGTTCTGTTGCATTATGCCTAGAGTTCCATGAAGAATTGGAAGATCATTGGGTTAGCAAGGGAGGTGATCGCTACAACGCTGCGACTTCGGCATCTTCATTTGAAGATTCATCGATTTCGAGCGAATCGGTTTCTTCGTTGGACTTGGCAGATGATGCGTGTTCATCGACTTCGAATGCTTCATCTCAATCTAATGGACCATTGGAGGATTTCACAGAGCTTCTTGCTCAACTGCCAATCAAGAGAGGGCTATCCATGTTCTATCAGGGAAAATCTCAGTCTTTTACATCTCTATCAAGTGTAAAGAGCATAGAAGACCTTCCAAAGAAGGAAAATCCTTACAGCAGGAGACTGAATGCATGTAAGAGCTATGCAGGTGGCTTGGACACCCACAAGTCTTCTTATGCTCTTCCAAAGGCTCCAACTTTTAAGAAGGCATCAAGAAGTTCTCTGTCTTTTGTCCAAGTTAGGAGAGGCAGTTCATTGGCTGGTTGTAGACCTCCTTCCATTCCTGTATATGATGAGAGCTTTTGA

Protein sequence

MGGIQRQLLHQPCSVALCLEFHEELEDHWVSKGGDRYNAATSASSFEDSSISSESVSSLDLADDACSSTSNASSQSNGPLEDFTELLAQLPIKRGLSMFYQGKSQSFTSLSSVKSIEDLPKKENPYSRRLNACKSYAGGLDTHKSSYALPKAPTFKKASRSSLSFVQVRRGSSLAGCRPPSIPVYDESF
Homology
BLAST of Lcy02g006400 vs. ExPASy TrEMBL
Match: A0A5D3CBD2 (Oxidative stress 3, putative isoform 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold323G00260 PE=4 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 5.9e-82
Identity = 157/190 (82.63%), Postives = 174/190 (91.58%), Query Frame = 0

Query: 1   MGGIQRQLLHQPCSVALCLEFHEELEDHW-VSKGGDRYNAATSASSFEDSSISSESVSSL 60
           MG +QR +LHQPCS  L  +FHE+LEDHW ++KGGD+YN A+S SSFEDS+ISSES+SS 
Sbjct: 1   MGELQRFMLHQPCSATLHQDFHEDLEDHWRITKGGDQYNVASSTSSFEDSTISSESLSSS 60

Query: 61  DLADDACSSTSNASSQSNGPLEDFTELLAQLPIKRGLSMFYQGKSQSFTSLSSVKSIEDL 120
           DLADDACSSTSN+SSQSNGPLEDFT+L AQLPIKRGLSMFYQGKS+SFTSLSSVKSIED+
Sbjct: 61  DLADDACSSTSNSSSQSNGPLEDFTDLFAQLPIKRGLSMFYQGKSRSFTSLSSVKSIEDI 120

Query: 121 PKKENPYSRRLNACKSYAGGLDTHKSSYALPKAPTFKKASRSSLSFVQVRRGSSLAGCRP 180
           PKK NPYSRRLN CKSYAGGLDTHKSSY LPKAPTFKKAS+SSLSFV VRRGS+LAGCRP
Sbjct: 121 PKKPNPYSRRLNTCKSYAGGLDTHKSSYTLPKAPTFKKASKSSLSFVHVRRGSNLAGCRP 180

Query: 181 PSIPVYDESF 190
           P IP+YDESF
Sbjct: 181 PPIPIYDESF 190

BLAST of Lcy02g006400 vs. ExPASy TrEMBL
Match: A0A1S3BH50 (uncharacterized protein LOC103489976 OS=Cucumis melo OX=3656 GN=LOC103489976 PE=4 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 5.9e-82
Identity = 157/190 (82.63%), Postives = 174/190 (91.58%), Query Frame = 0

Query: 1   MGGIQRQLLHQPCSVALCLEFHEELEDHW-VSKGGDRYNAATSASSFEDSSISSESVSSL 60
           MG +QR +LHQPCS  L  +FHE+LEDHW ++KGGD+YN A+S SSFEDS+ISSES+SS 
Sbjct: 1   MGELQRFMLHQPCSATLHQDFHEDLEDHWRITKGGDQYNVASSTSSFEDSTISSESLSSS 60

Query: 61  DLADDACSSTSNASSQSNGPLEDFTELLAQLPIKRGLSMFYQGKSQSFTSLSSVKSIEDL 120
           DLADDACSSTSN+SSQSNGPLEDFT+L AQLPIKRGLSMFYQGKS+SFTSLSSVKSIED+
Sbjct: 61  DLADDACSSTSNSSSQSNGPLEDFTDLFAQLPIKRGLSMFYQGKSRSFTSLSSVKSIEDI 120

Query: 121 PKKENPYSRRLNACKSYAGGLDTHKSSYALPKAPTFKKASRSSLSFVQVRRGSSLAGCRP 180
           PKK NPYSRRLN CKSYAGGLDTHKSSY LPKAPTFKKAS+SSLSFV VRRGS+LAGCRP
Sbjct: 121 PKKPNPYSRRLNTCKSYAGGLDTHKSSYTLPKAPTFKKASKSSLSFVHVRRGSNLAGCRP 180

Query: 181 PSIPVYDESF 190
           P IP+YDESF
Sbjct: 181 PPIPIYDESF 190

BLAST of Lcy02g006400 vs. ExPASy TrEMBL
Match: A0A0A0L8C9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G435530 PE=4 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 2.6e-77
Identity = 153/190 (80.53%), Postives = 169/190 (88.95%), Query Frame = 0

Query: 1   MGGIQRQLLHQPCSVALCLEFHEELEDHW-VSKGGDRYNAATSASSFEDSSISSESVSSL 60
           MG + R +LHQPCS  L  +FHEEL DHW ++KG D+YN A+S SSFEDS+ISSES+SS 
Sbjct: 1   MGELHRFMLHQPCSATLHQDFHEEL-DHWTITKGVDQYNVASSTSSFEDSTISSESLSSS 60

Query: 61  DLADDACSSTSNASSQSNGPLEDFTELLAQLPIKRGLSMFYQGKSQSFTSLSSVKSIEDL 120
           DLADDACSSTSN+SSQSNGPLEDFT+L AQLPIKRGLSMFYQGKS+SF SLSSVKSIED+
Sbjct: 61  DLADDACSSTSNSSSQSNGPLEDFTDLSAQLPIKRGLSMFYQGKSRSFASLSSVKSIEDI 120

Query: 121 PKKENPYSRRLNACKSYAGGLDTHKSSYALPKAPTFKKASRSSLSFVQVRRGSSLAGCRP 180
           PKK NPY RRLN CKSYAGGLD HKSSY LPKAPTFKKAS+SSLSFVQVRRGS+LAGCRP
Sbjct: 121 PKKPNPYGRRLNTCKSYAGGLDIHKSSYTLPKAPTFKKASKSSLSFVQVRRGSNLAGCRP 180

Query: 181 PSIPVYDESF 190
           P IP+YDESF
Sbjct: 181 PPIPIYDESF 189

BLAST of Lcy02g006400 vs. ExPASy TrEMBL
Match: A0A6J1DLD1 (uncharacterized protein LOC111021114 OS=Momordica charantia OX=3673 GN=LOC111021114 PE=4 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 2.2e-73
Identity = 152/189 (80.42%), Postives = 164/189 (86.77%), Query Frame = 0

Query: 1   MGGIQRQLLHQPCSVALCLEFHEELEDHWVSKGGDRYNAATSASSFEDSSISSESVSSLD 60
           MGGIQRQ L +  SVA+C EFHE LE+HWVSK  D YN A+S SSFEDSS+SS S+SS+ 
Sbjct: 1   MGGIQRQTLRESRSVAVCQEFHENLEEHWVSKRSDHYNVASSTSSFEDSSVSSGSLSSI- 60

Query: 61  LADDACSSTSNASSQSNGPLEDFTELLAQLPIKRGLSMFYQGKSQSFTSLSSVKSIEDLP 120
             +DACSSTSN SS+S+GPLEDFTELLAQLPIKRGLSMFYQGKSQSFTSLSSVKSIEDLP
Sbjct: 61  --EDACSSTSNTSSESSGPLEDFTELLAQLPIKRGLSMFYQGKSQSFTSLSSVKSIEDLP 120

Query: 121 KKENPYSRRLNACKSYAGGLDTHKSSYALPKAPTFKKASRSSLSFVQVRRGSSLAGCRPP 180
           KKENPYSRRLN  KSYAGGLDTHKSSY LPKAPTFKKASRSS+SFVQVRRGS+      P
Sbjct: 121 KKENPYSRRLNGYKSYAGGLDTHKSSYTLPKAPTFKKASRSSVSFVQVRRGSTTLA---P 180

Query: 181 SIPVYDESF 190
           SIPVYDESF
Sbjct: 181 SIPVYDESF 183

BLAST of Lcy02g006400 vs. ExPASy TrEMBL
Match: A0A6J1GAT2 (uncharacterized protein LOC111452482 OS=Cucurbita moschata OX=3662 GN=LOC111452482 PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 1.4e-51
Identity = 120/168 (71.43%), Postives = 128/168 (76.19%), Query Frame = 0

Query: 1   MGGIQRQLLHQPCSVALCLEFHEELEDHWVSKGGDRYNAATSASSFEDSSISSESVSSLD 60
           MGG    LLHQPCSVALC  FH   ED W   G   YN A+S SSFEDSS SS       
Sbjct: 1   MGG----LLHQPCSVALCKGFH---EDDWGKGGEYDYNLASSTSSFEDSSNSS------- 60

Query: 61  LADDACSSTSNASSQSNGPLEDFTELLAQLPIKRGLSMFYQGKSQSFTSLSSVKSIEDLP 120
             DDACSSTSN+SS SNG LEDFTEL AQLPIKRGLSMFY+GKSQSFTSLSSV+SIEDLP
Sbjct: 61  --DDACSSTSNSSSPSNGALEDFTELFAQLPIKRGLSMFYEGKSQSFTSLSSVRSIEDLP 120

Query: 121 KKENPYSRRLNACKSYAGGLDTHKSSYALPKAPTFKKASRSSLSFVQV 169
           KK +PYS RL+ CKSYAGGLDTHKS+Y LPKAPTFKKAS SS   + V
Sbjct: 121 KKRSPYSSRLSGCKSYAGGLDTHKSAYTLPKAPTFKKASSSSSKKISV 152

BLAST of Lcy02g006400 vs. NCBI nr
Match: XP_008447561.1 (PREDICTED: uncharacterized protein LOC103489976 [Cucumis melo] >KAA0050854.1 Oxidative stress 3, putative isoform 2 [Cucumis melo var. makuwa] >TYK08498.1 Oxidative stress 3, putative isoform 2 [Cucumis melo var. makuwa])

HSP 1 Score: 313.5 bits (802), Expect = 1.2e-81
Identity = 157/190 (82.63%), Postives = 174/190 (91.58%), Query Frame = 0

Query: 1   MGGIQRQLLHQPCSVALCLEFHEELEDHW-VSKGGDRYNAATSASSFEDSSISSESVSSL 60
           MG +QR +LHQPCS  L  +FHE+LEDHW ++KGGD+YN A+S SSFEDS+ISSES+SS 
Sbjct: 1   MGELQRFMLHQPCSATLHQDFHEDLEDHWRITKGGDQYNVASSTSSFEDSTISSESLSSS 60

Query: 61  DLADDACSSTSNASSQSNGPLEDFTELLAQLPIKRGLSMFYQGKSQSFTSLSSVKSIEDL 120
           DLADDACSSTSN+SSQSNGPLEDFT+L AQLPIKRGLSMFYQGKS+SFTSLSSVKSIED+
Sbjct: 61  DLADDACSSTSNSSSQSNGPLEDFTDLFAQLPIKRGLSMFYQGKSRSFTSLSSVKSIEDI 120

Query: 121 PKKENPYSRRLNACKSYAGGLDTHKSSYALPKAPTFKKASRSSLSFVQVRRGSSLAGCRP 180
           PKK NPYSRRLN CKSYAGGLDTHKSSY LPKAPTFKKAS+SSLSFV VRRGS+LAGCRP
Sbjct: 121 PKKPNPYSRRLNTCKSYAGGLDTHKSSYTLPKAPTFKKASKSSLSFVHVRRGSNLAGCRP 180

Query: 181 PSIPVYDESF 190
           P IP+YDESF
Sbjct: 181 PPIPIYDESF 190

BLAST of Lcy02g006400 vs. NCBI nr
Match: XP_038877919.1 (uncharacterized protein LOC120070129 [Benincasa hispida])

HSP 1 Score: 306.6 bits (784), Expect = 1.5e-79
Identity = 162/191 (84.82%), Postives = 171/191 (89.53%), Query Frame = 0

Query: 1   MGGIQRQLLHQPCSVALCLEFHEELEDHW-VSKGGDR-YNAATSASSFEDSSISSESVSS 60
           MG IQR +LHQPCSV +  EFH  LED W  +KG DR YN A+S SSFEDS+ISSES+SS
Sbjct: 1   MGEIQRLVLHQPCSVTVHQEFHAGLEDQWTTTKGDDRYYNVASSTSSFEDSTISSESLSS 60

Query: 61  LDLADDACSSTSNASSQSNGPLEDFTELLAQLPIKRGLSMFYQGKSQSFTSLSSVKSIED 120
           LDLADDACSSTSN+SSQSNGPLEDFTEL AQLPIKRGLSMFYQGKSQSFTSLSSVKSIED
Sbjct: 61  LDLADDACSSTSNSSSQSNGPLEDFTELFAQLPIKRGLSMFYQGKSQSFTSLSSVKSIED 120

Query: 121 LPKKENPYSRRLNACKSYAGGLDTHKSSYALPKAPTFKKASRSSLSFVQVRRGSSLAGCR 180
           LPKK N YSRRLN CKSYAGGLD HKSSY LPKAPTFKKAS+SSLSFVQVRRGS+LAGCR
Sbjct: 121 LPKKVNSYSRRLNTCKSYAGGLDNHKSSYTLPKAPTFKKASKSSLSFVQVRRGSTLAGCR 180

Query: 181 PPSIPVYDESF 190
           PPSIPVYDESF
Sbjct: 181 PPSIPVYDESF 191

BLAST of Lcy02g006400 vs. NCBI nr
Match: XP_004149181.1 (uncharacterized protein LOC101218329 [Cucumis sativus] >KGN58023.1 hypothetical protein Csa_011606 [Cucumis sativus])

HSP 1 Score: 298.1 bits (762), Expect = 5.3e-77
Identity = 153/190 (80.53%), Postives = 169/190 (88.95%), Query Frame = 0

Query: 1   MGGIQRQLLHQPCSVALCLEFHEELEDHW-VSKGGDRYNAATSASSFEDSSISSESVSSL 60
           MG + R +LHQPCS  L  +FHEEL DHW ++KG D+YN A+S SSFEDS+ISSES+SS 
Sbjct: 1   MGELHRFMLHQPCSATLHQDFHEEL-DHWTITKGVDQYNVASSTSSFEDSTISSESLSSS 60

Query: 61  DLADDACSSTSNASSQSNGPLEDFTELLAQLPIKRGLSMFYQGKSQSFTSLSSVKSIEDL 120
           DLADDACSSTSN+SSQSNGPLEDFT+L AQLPIKRGLSMFYQGKS+SF SLSSVKSIED+
Sbjct: 61  DLADDACSSTSNSSSQSNGPLEDFTDLSAQLPIKRGLSMFYQGKSRSFASLSSVKSIEDI 120

Query: 121 PKKENPYSRRLNACKSYAGGLDTHKSSYALPKAPTFKKASRSSLSFVQVRRGSSLAGCRP 180
           PKK NPY RRLN CKSYAGGLD HKSSY LPKAPTFKKAS+SSLSFVQVRRGS+LAGCRP
Sbjct: 121 PKKPNPYGRRLNTCKSYAGGLDIHKSSYTLPKAPTFKKASKSSLSFVQVRRGSNLAGCRP 180

Query: 181 PSIPVYDESF 190
           P IP+YDESF
Sbjct: 181 PPIPIYDESF 189

BLAST of Lcy02g006400 vs. NCBI nr
Match: XP_022153661.1 (uncharacterized protein LOC111021114 [Momordica charantia])

HSP 1 Score: 285.0 bits (728), Expect = 4.6e-73
Identity = 152/189 (80.42%), Postives = 164/189 (86.77%), Query Frame = 0

Query: 1   MGGIQRQLLHQPCSVALCLEFHEELEDHWVSKGGDRYNAATSASSFEDSSISSESVSSLD 60
           MGGIQRQ L +  SVA+C EFHE LE+HWVSK  D YN A+S SSFEDSS+SS S+SS+ 
Sbjct: 1   MGGIQRQTLRESRSVAVCQEFHENLEEHWVSKRSDHYNVASSTSSFEDSSVSSGSLSSI- 60

Query: 61  LADDACSSTSNASSQSNGPLEDFTELLAQLPIKRGLSMFYQGKSQSFTSLSSVKSIEDLP 120
             +DACSSTSN SS+S+GPLEDFTELLAQLPIKRGLSMFYQGKSQSFTSLSSVKSIEDLP
Sbjct: 61  --EDACSSTSNTSSESSGPLEDFTELLAQLPIKRGLSMFYQGKSQSFTSLSSVKSIEDLP 120

Query: 121 KKENPYSRRLNACKSYAGGLDTHKSSYALPKAPTFKKASRSSLSFVQVRRGSSLAGCRPP 180
           KKENPYSRRLN  KSYAGGLDTHKSSY LPKAPTFKKASRSS+SFVQVRRGS+      P
Sbjct: 121 KKENPYSRRLNGYKSYAGGLDTHKSSYTLPKAPTFKKASRSSVSFVQVRRGSTTLA---P 180

Query: 181 SIPVYDESF 190
           SIPVYDESF
Sbjct: 181 SIPVYDESF 183

BLAST of Lcy02g006400 vs. NCBI nr
Match: XP_023524906.1 (uncharacterized protein LOC111788696 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 215.7 bits (548), Expect = 3.4e-52
Identity = 123/167 (73.65%), Postives = 133/167 (79.64%), Query Frame = 0

Query: 1   MGGIQRQLLHQPCSVALCLEFHEELEDHWVSKGGD--RYNAATSASSFEDSSISSESVSS 60
           MGG    LLHQPCSVALC  FHEELED W  KGG+   YN A+S SSFEDSS SS     
Sbjct: 1   MGG----LLHQPCSVALCKGFHEELEDDW-GKGGEYHHYNLASSTSSFEDSSNSS----- 60

Query: 61  LDLADDACSSTSNASSQSNGPLEDFTELLAQLPIKRGLSMFYQGKSQSFTSLSSVKSIED 120
               DDACSSTSN+SS SNG LEDFTEL AQLPIKRGLSMFY+GKSQSFTSLSSV+SIED
Sbjct: 61  ----DDACSSTSNSSSPSNGALEDFTELFAQLPIKRGLSMFYEGKSQSFTSLSSVRSIED 120

Query: 121 LPKKENPYSRRLNACKSYAGGLDTHK-SSYALPKAPTFKKASRSSLS 165
           LPKK +PYS RL+ CKSYAGGLDTHK ++Y LPKAP+FKKAS SS S
Sbjct: 121 LPKKRSPYSSRLSGCKSYAGGLDTHKCAAYTLPKAPSFKKASSSSSS 153

BLAST of Lcy02g006400 vs. TAIR 10
Match: AT5G56550.1 (oxidative stress 3 )

HSP 1 Score: 82.0 bits (201), Expect = 5.5e-16
Identity = 59/130 (45.38%), Postives = 77/130 (59.23%), Query Frame = 0

Query: 40  ATSASSFEDSSISSESVSSL--DLADDACSSTSNASSQSNGPLEDFTELLAQLPIKRGLS 99
           +T+ S  ED+S S    SS+  D  +D       +SS SNGPLED ++L++ LPIKRGLS
Sbjct: 34  STTFSDEEDNSSSCSLSSSMCSDFTEDD-DDDDVSSSSSNGPLEDLSDLMSHLPIKRGLS 93

Query: 100 MFYQGKSQSFTSLSSVKSIEDLPK---KENPYSRRLNACKSYAGGLDTHKSSYALPKAPT 159
            FY+GKSQSFTSL +VKS+EDL K   K   Y  +  + +S  G LD        PKA  
Sbjct: 94  KFYEGKSQSFTSLGNVKSLEDLMKRGFKSRNYGAKRKSSRSTGGILDQSYKRVFSPKATI 153

Query: 160 FKKASRSSLS 165
            KK +R+  S
Sbjct: 154 SKKPNRTPSS 162

BLAST of Lcy02g006400 vs. TAIR 10
Match: AT4G26288.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: oxidative stress 3 (TAIR:AT5G56550.1); Has 289 Blast hits to 232 proteins in 41 species: Archae - 0; Bacteria - 12; Metazoa - 36; Fungi - 21; Plants - 151; Viruses - 2; Other Eukaryotes - 67 (source: NCBI BLink). )

HSP 1 Score: 81.3 bits (199), Expect = 9.4e-16
Identity = 60/129 (46.51%), Postives = 84/129 (65.12%), Query Frame = 0

Query: 42  SASSFEDSSISSESVSSLDLADDACSSTSNASSQSNGPLEDFTELLAQLPI----KRGLS 101
           S SS + SS SS S+ S DL +DA SS+S++SS SNGP +D ++L++QLPI    K GLS
Sbjct: 22  SGSSAKVSSSSSISMCSSDLTEDASSSSSSSSSSSNGPFDDLSDLISQLPIIQVKKGGLS 81

Query: 102 MFYQGKSQSFTSLSSVKSIEDLPKKENPYSRRLNACK-SYAGGLDTHKSSYALPKAPTFK 161
            +Y+GKSQSFTSL++V S++DL K+    SR  + CK  Y  G    K++ ++    T  
Sbjct: 82  KYYKGKSQSFTSLANVTSLQDLVKRG---SRTKSCCKRDYFYG---PKATISMKATRTSS 141

Query: 162 KASRSSLSF 166
           K S S L+F
Sbjct: 142 KHSNSRLTF 144

BLAST of Lcy02g006400 vs. TAIR 10
Match: AT5G21940.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G43850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 58.2 bits (139), Expect = 8.6e-09
Identity = 45/113 (39.82%), Postives = 60/113 (53.10%), Query Frame = 0

Query: 29  WVSKGGDRYNAATSASSFEDSSISSES----VSSLDLADDACSSTSNASSQSNGPLEDFT 88
           W S      ++++S SS   SSI   S     SS D  DDA    +   S   GPLE   
Sbjct: 22  WFSPSPSPSDSSSSPSSSASSSIGRNSDDGEKSSEDGGDDA--GENEVESPYKGPLEMME 81

Query: 89  ELLAQLPIKRGLSMFYQGKSQSFT--------SLSSVKSIEDLPKKENPYSRR 130
            L   LP+++G+S +Y GKS+SFT        +L+S  S++DL K ENPYSRR
Sbjct: 82  SLEQVLPVRKGISKYYSGKSKSFTNLTAEAASALTSSSSMKDLAKPENPYSRR 132

BLAST of Lcy02g006400 vs. TAIR 10
Match: AT3G43850.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G21940.1); Has 215 Blast hits to 215 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 213; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 57.4 bits (137), Expect = 1.5e-08
Identity = 39/83 (46.99%), Postives = 50/83 (60.24%), Query Frame = 0

Query: 49  SSISSESVSSLDLADDACSSTSNASSQSNGPLEDFTELLAQLPIKRGLSMFYQGKSQSFT 108
           SS SS+S+   + +DD     +   S  NGPL+    L   LPIKR +S FY+GKS+SF 
Sbjct: 23  SSTSSDSIG--ENSDDDEGGENEIESSYNGPLDMMESLEEALPIKRAISKFYKGKSKSFM 82

Query: 109 SLSSVKS--IEDLPKKENPYSRR 130
           SLS   S  ++DL K EN YSRR
Sbjct: 83  SLSETSSLPVKDLTKPENLYSRR 103

BLAST of Lcy02g006400 vs. TAIR 10
Match: AT3G03170.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G24890.1); Has 184 Blast hits to 184 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 184; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 49.7 bits (117), Expect = 3.0e-06
Identity = 29/71 (40.85%), Postives = 43/71 (60.56%), Query Frame = 0

Query: 60  DLADDACSSTSNASSQSNGPLEDFTELLAQLPIKRGLSMFYQGKSQSFTSLSSVKSIEDL 119
           D+  DA    ++ SS  N P +D     +    +RGLS  Y+GKSQSFT+L+   ++EDL
Sbjct: 24  DVDADADEGVNSPSSFPNSP-DDSDRRSSSSSSRRGLSKHYKGKSQSFTTLAEALTVEDL 83

Query: 120 PKKENPYSRRL 131
            K ENP++ +L
Sbjct: 84  AKPENPFNAKL 93

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3CBD25.9e-8282.63Oxidative stress 3, putative isoform 2 OS=Cucumis melo var. makuwa OX=1194695 GN... [more]
A0A1S3BH505.9e-8282.63uncharacterized protein LOC103489976 OS=Cucumis melo OX=3656 GN=LOC103489976 PE=... [more]
A0A0A0L8C92.6e-7780.53Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G435530 PE=4 SV=1[more]
A0A6J1DLD12.2e-7380.42uncharacterized protein LOC111021114 OS=Momordica charantia OX=3673 GN=LOC111021... [more]
A0A6J1GAT21.4e-5171.43uncharacterized protein LOC111452482 OS=Cucurbita moschata OX=3662 GN=LOC1114524... [more]
Match NameE-valueIdentityDescription
XP_008447561.11.2e-8182.63PREDICTED: uncharacterized protein LOC103489976 [Cucumis melo] >KAA0050854.1 Oxi... [more]
XP_038877919.11.5e-7984.82uncharacterized protein LOC120070129 [Benincasa hispida][more]
XP_004149181.15.3e-7780.53uncharacterized protein LOC101218329 [Cucumis sativus] >KGN58023.1 hypothetical ... [more]
XP_022153661.14.6e-7380.42uncharacterized protein LOC111021114 [Momordica charantia][more]
XP_023524906.13.4e-5273.65uncharacterized protein LOC111788696 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
AT5G56550.15.5e-1645.38oxidative stress 3 [more]
AT4G26288.19.4e-1646.51FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... [more]
AT5G21940.18.6e-0939.82unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT3G43850.11.5e-0846.99unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G03170.13.0e-0640.85unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33172:SF45EMB|CAB83157.1coord: 40..174
NoneNo IPR availablePANTHERPTHR33172OS08G0516900 PROTEINcoord: 40..174

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy02g006400.1Lcy02g006400.1mRNA