Lcy02g006260 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy02g006260
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Ankyrin repeat family protein
Location	Chr02: 8115780 .. 8116724 (-)
RNA-Seq Expression	Lcy02g006260
Synteny	Lcy02g006260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCGACCAGCTCGCCATCAACAACACCGATGAGGAATTCCAAGTTCTCGAGGGCATGTTGAAAAATGCCGGCGGCGAGAGAAGAAGATCAGAATCGGCCATTCCAAATATTCAAACTACAAAGGAATGGAAATCAACTCATTTTTAACAACGAAACTTAGATGGTGATAAGGAGGAAGAAAAAAGGAGCGAAAGTGAAAATAAAAATGTCACCAGAAGTATCAACCAAGTTGATCAAGAAAACACATCAAACGATGAAGCAATGGACGAGAACAAAAATGGGTCTGCTCCAAACAACTTGATATTACAAAGGAATCGCAGCCAAGATCAGCGGAAGCTACTAATAAGAAAACTAAGTAAGAAGAAGATCATCTACAACGAGCAGCAGGAGAAGCAACGCGATATGTACAAAGAGTCACTGCAAAACGCAAGGAACGCGTTGACATTAGTTTCAACTTTGATTGCTACAGTCACATTTTCCGCCGGCATAAACCCGCCGGGTGGCTTCCACCAAGACGGACCATTGAAAGGGAAAGCAATATTTTCGAAAACAAAAGGGTACAAAGTGTTTATGATAAGCAACAGCATGGCGCACTGTCGACGTCTCTATGGCAGCCATGGTGACGGCTTTCACGTCGGGGACATGGCTGACCTTGTCGCAGGATTAGAGCGATTGGCTTCGATATGTGATATTGGCAGTGGTGGGTGGGATTATGGGAATCCTATTCATTTGTTTGTTAGTGAAGTTAATAAAGCATTGGATGAAGAAGGGGAAGTGTGGAGAAGGGCTGCGGGAGTTGCTCTTATGATGGGCGGAAATGTTGAAGACATCGACTTTGGTGTACAATCCACTTTAGGTTCATTGTCTGGAGATCACCTCCGTCATGACTCATTTGTCAATAATTCCGACATCGCCGTTAGTGCTCGTGGTCATCCATTATAG

mRNA sequence

ATGCTCGACCAGCTCGCCATCAACAACACCGATGAGGAATTCCAAGTTCTCGAGGGCATAAGTATCAACCAAGTTGATCAAGAAAACACATCAAACGATGAAGCAATGGACGAGAACAAAAATGGGTCTGCTCCAAACAACTTGATATTACAAAGGAATCGCAGCCAAGATCAGCGGAAGCTACTAATAAGAAAACTAAGTAAGAAGAAGATCATCTACAACGAGCAGCAGGAGAAGCAACGCGATATGTACAAAGAGTCACTGCAAAACGCAAGGAACGCGTTGACATTAGTTTCAACTTTGATTGCTACAGTCACATTTTCCGCCGGCATAAACCCGCCGGGTGGCTTCCACCAAGACGGACCATTGAAAGGGAAAGCAATATTTTCGAAAACAAAAGGGTACAAAGTGTTTATGATAAGCAACAGCATGGCGCACTGTCGACGTCTCTATGGCAGCCATGGTGACGGCTTTCACGTCGGGGACATGGCTGACCTTGTCGCAGGATTAGAGCGATTGGCTTCGATATGTGATATTGGCAGTGGTGGGTGGGATTATGGGAATCCTATTCATTTGTTTGTTAGTGAAGTTAATAAAGCATTGGATGAAGAAGGGGAAGTGTGGAGAAGGGCTGCGGGAGTTGCTCTTATGATGGGCGGAAATGTTGAAGACATCGACTTTGGTGTACAATCCACTTTAGGTTCATTGTCTGGAGATCACCTCCGTCATGACTCATTTGTCAATAATTCCGACATCGCCGTTAGTGCTCGTGGTCATCCATTATAG

Coding sequence (CDS)

ATGCTCGACCAGCTCGCCATCAACAACACCGATGAGGAATTCCAAGTTCTCGAGGGCATAAGTATCAACCAAGTTGATCAAGAAAACACATCAAACGATGAAGCAATGGACGAGAACAAAAATGGGTCTGCTCCAAACAACTTGATATTACAAAGGAATCGCAGCCAAGATCAGCGGAAGCTACTAATAAGAAAACTAAGTAAGAAGAAGATCATCTACAACGAGCAGCAGGAGAAGCAACGCGATATGTACAAAGAGTCACTGCAAAACGCAAGGAACGCGTTGACATTAGTTTCAACTTTGATTGCTACAGTCACATTTTCCGCCGGCATAAACCCGCCGGGTGGCTTCCACCAAGACGGACCATTGAAAGGGAAAGCAATATTTTCGAAAACAAAAGGGTACAAAGTGTTTATGATAAGCAACAGCATGGCGCACTGTCGACGTCTCTATGGCAGCCATGGTGACGGCTTTCACGTCGGGGACATGGCTGACCTTGTCGCAGGATTAGAGCGATTGGCTTCGATATGTGATATTGGCAGTGGTGGGTGGGATTATGGGAATCCTATTCATTTGTTTGTTAGTGAAGTTAATAAAGCATTGGATGAAGAAGGGGAAGTGTGGAGAAGGGCTGCGGGAGTTGCTCTTATGATGGGCGGAAATGTTGAAGACATCGACTTTGGTGTACAATCCACTTTAGGTTCATTGTCTGGAGATCACCTCCGTCATGACTCATTTGTCAATAATTCCGACATCGCCGTTAGTGCTCGTGGTCATCCATTATAG

Protein sequence

MLDQLAINNTDEEFQVLEGISINQVDQENTSNDEAMDENKNGSAPNNLILQRNRSQDQRKLLIRKLSKKKIIYNEQQEKQRDMYKESLQNARNALTLVSTLIATVTFSAGINPPGGFHQDGPLKGKAIFSKTKGYKVFMISNSMAHCRRLYGSHGDGFHVGDMADLVAGLERLASICDIGSGGWDYGNPIHLFVSEVNKALDEEGEVWRRAAGVALMMGGNVEDIDFGVQSTLGSLSGDHLRHDSFVNNSDIAVSARGHPL

Homology

[Close]

BLAST of Lcy02g006260 vs. ExPASy Swiss-Prot
Match: Q9C7A2 (Ankyrin repeat-containing protein ITN1 OS=Arabidopsis thaliana OX=3702 GN=ITN1 PE=1 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 2.2e-04
Identity = 27/76 (35.53%), Postives = 45/76 (59.21%), Query Frame = 0


Query: 70  KIIYNEQQEKQRDMYKESLQNARNALTLVSTLIATVTFSAGINPPGGFHQDGPLKGKAIF 129
           K ++N  +E  R +++E + NA N++T+V+ L ATV F+A    PGG + D    G A+ 
Sbjct: 398 KNVHNISKE-LRKLHREGINNATNSVTVVAVLFATVAFAAIFTVPGGDNND----GSAVV 457

Query: 130 SKTKGYKVFMISNSMA 146
                +K+F I N++A
Sbjct: 458 VGRASFKIFFIFNALA 468

[Close]

BLAST of Lcy02g006260 vs. ExPASy TrEMBL
Match: A0A6J1DJA0 (ankyrin repeat-containing protein ITN1-like OS=Momordica charantia OX=3673 GN=LOC111021038 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 7.5e-27
Identity = 79/138 (57.25%), Postives = 100/138 (72.46%), Query Frame = 0


Query: 11  DEEFQVLEGISINQVDQENTSNDEAMD--ENKNGSA-PNNLILQRNRSQDQRKLLIRKLS 70
           DEE +  E +  N V     ++DE +D  E K G   PNNL  Q++ SQ +RK+L+ K+ 
Sbjct: 388 DEEIE-HENLGSNNVIH---AHDEQVDQAEKKYGYVLPNNLDKQKHLSQKRRKVLVSKMD 447

Query: 71  KKKIIYNEQQEKQRDMYKESLQNARNALTLVSTLIATVTFSAGINPPGGFHQDGPLKGKA 130
                Y  Q+EKQ +MYKE+LQNARN +TLV+TLIAT+TFS GINPPGG HQDGPL GKA
Sbjct: 448 G----YRSQREKQHNMYKETLQNARNTITLVATLIATITFSVGINPPGGIHQDGPLIGKA 507

Query: 131 IFSKTKGYKVFMISNSMA 146
           +F+KTKGYKVF+ISNS+A
Sbjct: 508 VFAKTKGYKVFIISNSIA 517

[Close]

BLAST of Lcy02g006260 vs. ExPASy TrEMBL
Match: A0A6J1DH91 (ankyrin repeat-containing protein At2g01680-like OS=Momordica charantia OX=3673 GN=LOC111021072 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 6.3e-26
Identity = 79/148 (53.38%), Postives = 103/148 (69.59%), Query Frame = 0


Query: 3   DQLAINNTDEEFQVLEGISINQVDQENT--SNDEAMD--ENKNGSA-PNNLILQRNRSQD 62
           D L   + D + +  E I IN +   +   +NDE +D  E K GS  PNNL  Q++ SQ 
Sbjct: 432 DGLQKIDLDHDKKEEERIDINNLRSNSVIHANDEQVDQAEKKYGSVLPNNLERQKHLSQK 491

Query: 63  QRKLLIRKLSKKKIIYNEQQEKQRDMYKESLQNARNALTLVSTLIATVTFSAGINPPGGF 122
           +RK+L  K+ + +     ++EKQ DMYKE+LQNARN +TLV+ LIAT+TFS GINPPGG 
Sbjct: 492 RRKVLKSKMDENR----SRREKQHDMYKEALQNARNTVTLVAALIATITFSVGINPPGGV 551

Query: 123 HQDGPLKGKAIFSKTKGYKVFMISNSMA 146
           HQDGPL GKA+F+K KGYKVF+ISNS+A
Sbjct: 552 HQDGPLIGKAVFAKAKGYKVFIISNSIA 575

[Close]

BLAST of Lcy02g006260 vs. ExPASy TrEMBL
Match: A0A6J1DLC6 (ankyrin repeat-containing protein At5g02620-like OS=Momordica charantia OX=3673 GN=LOC111021110 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 1.4e-25
Identity = 75/140 (53.57%), Postives = 98/140 (70.00%), Query Frame = 0


Query: 16  VLEGISINQVDQENT-------SNDEAMD--ENKNGS-APNNLILQRNRSQDQRKLLIRK 75
           + E   + ++D EN        +ND+  D  ENKN S  P NL  Q++ SQ +R++LI K
Sbjct: 365 LFEEDGLQKIDNENLGSNNVIHANDKQADQEENKNWSMVPYNLERQKHLSQKRREVLISK 424

Query: 76  LSKKKIIYNEQQEKQRDMYKESLQNARNALTLVSTLIATVTFSAGINPPGGFHQDGPLKG 135
           +      Y  ++EKQ DM+KE+LQNARN +TLV+ LIAT+TFSA INPPGG HQDGPL G
Sbjct: 425 MD----TYRSRREKQHDMHKEALQNARNTVTLVAALIATITFSASINPPGGVHQDGPLIG 484

Query: 136 KAIFSKTKGYKVFMISNSMA 146
           KAIF+KTKGYK+F+ SNS+A
Sbjct: 485 KAIFAKTKGYKIFITSNSIA 500

[Close]

BLAST of Lcy02g006260 vs. ExPASy TrEMBL
Match: A0A6J1DJF7 (ankyrin repeat-containing protein ITN1-like OS=Momordica charantia OX=3673 GN=LOC111021084 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 1.8e-25
Identity = 71/138 (51.45%), Postives = 94/138 (68.12%), Query Frame = 0


Query: 8   NNTDEEFQVLEGISINQVDQENTSNDEAMDENKNGSAPNNLILQRNRSQDQRKLLIRKLS 67
           N  +E+    E +  N V + N   D+  +        NNL  Q + SQ + K+LI K+ 
Sbjct: 375 NEKEEDKIDHENLGSNNVIRANDEQDDQEENKDEYVVSNNLERQEHLSQKRWKVLISKMD 434

Query: 68  KKKIIYNEQQEKQRDMYKESLQNARNALTLVSTLIATVTFSAGINPPGGFHQDGPLKGKA 127
           +    Y+ ++EKQ DMYKE+LQNARN +TLV+ LIAT+TFS GINPPGG HQDGPL GKA
Sbjct: 435 E----YHSRREKQHDMYKEALQNARNTVTLVAALIATITFSVGINPPGGVHQDGPLIGKA 494

Query: 128 IFSKTKGYKVFMISNSMA 146
           +F+KTKGYKVF+ISN++A
Sbjct: 495 VFAKTKGYKVFIISNTIA 508

[Close]

BLAST of Lcy02g006260 vs. ExPASy TrEMBL
Match: A0A6J1DL07 (ankyrin repeat-containing protein At2g01680-like OS=Momordica charantia OX=3673 GN=LOC111021037 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 3.1e-25
Identity = 71/125 (56.80%), Postives = 94/125 (75.20%), Query Frame = 0


Query: 24  QVDQENTSNDEAMD--ENKNGSAP-NNLILQRNRSQDQRKLLIRKLSKKKIIYNEQQEKQ 83
           QV   +   DE +D  ENK G    +N+  Q++ SQ +RK+LIRK+ + +     ++EKQ
Sbjct: 440 QVSSFSIGTDEQVDQKENKGGFVVLHNMERQKHLSQKRRKVLIRKMDENR----SRREKQ 499

Query: 84  RDMYKESLQNARNALTLVSTLIATVTFSAGINPPGGFHQDGPLKGKAIFSKTKGYKVFMI 143
            DMYKE+LQNARN +TLV+ LIAT+TFS GI+PPGG HQDGPL GKA+F+KTKGYK+F+I
Sbjct: 500 HDMYKEALQNARNTVTLVAALIATITFSVGISPPGGVHQDGPLIGKAVFAKTKGYKIFII 559

Query: 144 SNSMA 146
           SNS+A
Sbjct: 560 SNSIA 560

[Close]

BLAST of Lcy02g006260 vs. NCBI nr
Match: XP_022153567.1 (ankyrin repeat-containing protein ITN1-like [Momordica charantia])

HSP 1 Score: 131.0 bits (328), Expect = 1.5e-26
Identity = 79/138 (57.25%), Postives = 100/138 (72.46%), Query Frame = 0


Query: 11  DEEFQVLEGISINQVDQENTSNDEAMD--ENKNGSA-PNNLILQRNRSQDQRKLLIRKLS 70
           DEE +  E +  N V     ++DE +D  E K G   PNNL  Q++ SQ +RK+L+ K+ 
Sbjct: 388 DEEIE-HENLGSNNVIH---AHDEQVDQAEKKYGYVLPNNLDKQKHLSQKRRKVLVSKMD 447

Query: 71  KKKIIYNEQQEKQRDMYKESLQNARNALTLVSTLIATVTFSAGINPPGGFHQDGPLKGKA 130
                Y  Q+EKQ +MYKE+LQNARN +TLV+TLIAT+TFS GINPPGG HQDGPL GKA
Sbjct: 448 G----YRSQREKQHNMYKETLQNARNTITLVATLIATITFSVGINPPGGIHQDGPLIGKA 507

Query: 131 IFSKTKGYKVFMISNSMA 146
           +F+KTKGYKVF+ISNS+A
Sbjct: 508 VFAKTKGYKVFIISNSIA 517

[Close]

BLAST of Lcy02g006260 vs. NCBI nr
Match: XP_022153605.1 (ankyrin repeat-containing protein At2g01680-like [Momordica charantia])

HSP 1 Score: 127.9 bits (320), Expect = 1.3e-25
Identity = 79/148 (53.38%), Postives = 103/148 (69.59%), Query Frame = 0


Query: 3   DQLAINNTDEEFQVLEGISINQVDQENT--SNDEAMD--ENKNGSA-PNNLILQRNRSQD 62
           D L   + D + +  E I IN +   +   +NDE +D  E K GS  PNNL  Q++ SQ 
Sbjct: 432 DGLQKIDLDHDKKEEERIDINNLRSNSVIHANDEQVDQAEKKYGSVLPNNLERQKHLSQK 491

Query: 63  QRKLLIRKLSKKKIIYNEQQEKQRDMYKESLQNARNALTLVSTLIATVTFSAGINPPGGF 122
           +RK+L  K+ + +     ++EKQ DMYKE+LQNARN +TLV+ LIAT+TFS GINPPGG 
Sbjct: 492 RRKVLKSKMDENR----SRREKQHDMYKEALQNARNTVTLVAALIATITFSVGINPPGGV 551

Query: 123 HQDGPLKGKAIFSKTKGYKVFMISNSMA 146
           HQDGPL GKA+F+K KGYKVF+ISNS+A
Sbjct: 552 HQDGPLIGKAVFAKAKGYKVFIISNSIA 575

[Close]

BLAST of Lcy02g006260 vs. NCBI nr
Match: XP_022153656.1 (ankyrin repeat-containing protein At5g02620-like [Momordica charantia])

HSP 1 Score: 126.7 bits (317), Expect = 2.9e-25
Identity = 75/140 (53.57%), Postives = 98/140 (70.00%), Query Frame = 0


Query: 16  VLEGISINQVDQENT-------SNDEAMD--ENKNGS-APNNLILQRNRSQDQRKLLIRK 75
           + E   + ++D EN        +ND+  D  ENKN S  P NL  Q++ SQ +R++LI K
Sbjct: 365 LFEEDGLQKIDNENLGSNNVIHANDKQADQEENKNWSMVPYNLERQKHLSQKRREVLISK 424

Query: 76  LSKKKIIYNEQQEKQRDMYKESLQNARNALTLVSTLIATVTFSAGINPPGGFHQDGPLKG 135
           +      Y  ++EKQ DM+KE+LQNARN +TLV+ LIAT+TFSA INPPGG HQDGPL G
Sbjct: 425 MD----TYRSRREKQHDMHKEALQNARNTVTLVAALIATITFSASINPPGGVHQDGPLIG 484

Query: 136 KAIFSKTKGYKVFMISNSMA 146
           KAIF+KTKGYK+F+ SNS+A
Sbjct: 485 KAIFAKTKGYKIFITSNSIA 500

[Close]

BLAST of Lcy02g006260 vs. NCBI nr
Match: XP_022153622.1 (ankyrin repeat-containing protein ITN1-like [Momordica charantia])

HSP 1 Score: 126.3 bits (316), Expect = 3.8e-25
Identity = 71/138 (51.45%), Postives = 94/138 (68.12%), Query Frame = 0


Query: 8   NNTDEEFQVLEGISINQVDQENTSNDEAMDENKNGSAPNNLILQRNRSQDQRKLLIRKLS 67
           N  +E+    E +  N V + N   D+  +        NNL  Q + SQ + K+LI K+ 
Sbjct: 375 NEKEEDKIDHENLGSNNVIRANDEQDDQEENKDEYVVSNNLERQEHLSQKRWKVLISKMD 434

Query: 68  KKKIIYNEQQEKQRDMYKESLQNARNALTLVSTLIATVTFSAGINPPGGFHQDGPLKGKA 127
           +    Y+ ++EKQ DMYKE+LQNARN +TLV+ LIAT+TFS GINPPGG HQDGPL GKA
Sbjct: 435 E----YHSRREKQHDMYKEALQNARNTVTLVAALIATITFSVGINPPGGVHQDGPLIGKA 494

Query: 128 IFSKTKGYKVFMISNSMA 146
           +F+KTKGYKVF+ISN++A
Sbjct: 495 VFAKTKGYKVFIISNTIA 508

[Close]

BLAST of Lcy02g006260 vs. NCBI nr
Match: XP_022153566.1 (ankyrin repeat-containing protein At2g01680-like [Momordica charantia])

HSP 1 Score: 125.6 bits (314), Expect = 6.5e-25
Identity = 71/125 (56.80%), Postives = 94/125 (75.20%), Query Frame = 0


Query: 24  QVDQENTSNDEAMD--ENKNGSAP-NNLILQRNRSQDQRKLLIRKLSKKKIIYNEQQEKQ 83
           QV   +   DE +D  ENK G    +N+  Q++ SQ +RK+LIRK+ + +     ++EKQ
Sbjct: 440 QVSSFSIGTDEQVDQKENKGGFVVLHNMERQKHLSQKRRKVLIRKMDENR----SRREKQ 499

Query: 84  RDMYKESLQNARNALTLVSTLIATVTFSAGINPPGGFHQDGPLKGKAIFSKTKGYKVFMI 143
            DMYKE+LQNARN +TLV+ LIAT+TFS GI+PPGG HQDGPL GKA+F+KTKGYK+F+I
Sbjct: 500 HDMYKEALQNARNTVTLVAALIATITFSVGISPPGGVHQDGPLIGKAVFAKTKGYKIFII 559

Query: 144 SNSMA 146
           SNS+A
Sbjct: 560 SNSIA 560

[Close]

BLAST of Lcy02g006260 vs. TAIR 10
Match: AT5G54710.1 (Ankyrin repeat family protein )

HSP 1 Score: 87.8 bits (216), Expect = 1.4e-17
Identity = 38/71 (53.52%), Postives = 55/71 (77.46%), Query Frame = 0


Query: 75  EQQEKQRDMYKESLQNARNALTLVSTLIATVTFSAGINPPGGFHQDGPLKGKAIFSKTKG 134
           + + K+R+M+ ESLQNARN +T+V+ LIA+V F+ GINPPGG HQDGP  GKA   +T  
Sbjct: 407 DPRNKEREMHSESLQNARNTITIVAVLIASVAFTCGINPPGGVHQDGPFIGKATAGRTLA 466

Query: 135 YKVFMISNSMA 146
           +K+F ++N++A
Sbjct: 467 FKIFSVANNIA 477

[Close]

BLAST of Lcy02g006260 vs. TAIR 10
Match: AT1G10340.1 (Ankyrin repeat family protein )

HSP 1 Score: 82.4 bits (202), Expect = 5.8e-16
Identity = 39/82 (47.56%), Postives = 59/82 (71.95%), Query Frame = 0


Query: 64  RKLSKKKIIYNEQQEKQRDMYKESLQNARNALTLVSTLIATVTFSAGINPPGGFHQDGPL 123
           RK SK++ +   +Q  +  M+ E+LQNARN + +V+ LIA+V ++ GINPPGG +QDGP 
Sbjct: 377 RKRSKEQEVERGRQNLEYQMHIEALQNARNTIAIVAVLIASVAYAGGINPPGGVYQDGPW 436

Query: 124 KGKAIFSKTKGYKVFMISNSMA 146
           +GK++  KT  +KVF I N++A
Sbjct: 437 RGKSLVGKTTAFKVFAICNNIA 458

[Close]

BLAST of Lcy02g006260 vs. TAIR 10
Match: AT1G10340.2 (Ankyrin repeat family protein )

HSP 1 Score: 82.4 bits (202), Expect = 5.8e-16
Identity = 39/82 (47.56%), Postives = 59/82 (71.95%), Query Frame = 0


Query: 64  RKLSKKKIIYNEQQEKQRDMYKESLQNARNALTLVSTLIATVTFSAGINPPGGFHQDGPL 123
           RK SK++ +   +Q  +  M+ E+LQNARN + +V+ LIA+V ++ GINPPGG +QDGP 
Sbjct: 373 RKRSKEQEVERGRQNLEYQMHIEALQNARNTIAIVAVLIASVAYAGGINPPGGVYQDGPW 432

Query: 124 KGKAIFSKTKGYKVFMISNSMA 146
           +GK++  KT  +KVF I N++A
Sbjct: 433 RGKSLVGKTTAFKVFAICNNIA 454

[Close]

BLAST of Lcy02g006260 vs. TAIR 10
Match: AT2G24600.3 (Ankyrin repeat family protein )

HSP 1 Score: 82.4 bits (202), Expect = 5.8e-16
Identity = 39/82 (47.56%), Postives = 58/82 (70.73%), Query Frame = 0


Query: 64  RKLSKKKIIYNEQQEKQRDMYKESLQNARNALTLVSTLIATVTFSAGINPPGGFHQDGPL 123
           RK SKK  +    +  + +M+ E+LQNARN + +V+ LIA+V+++ GINPPGG +QDGP 
Sbjct: 377 RKKSKKHHVKRGHKSLEHEMHIEALQNARNTIAIVAVLIASVSYAGGINPPGGVYQDGPW 436

Query: 124 KGKAIFSKTKGYKVFMISNSMA 146
           KGK++   T  +KVF I N++A
Sbjct: 437 KGKSLVGNTAAFKVFAICNNIA 458

[Close]

BLAST of Lcy02g006260 vs. TAIR 10
Match: AT2G24600.4 (Ankyrin repeat family protein )

HSP 1 Score: 82.4 bits (202), Expect = 5.8e-16
Identity = 39/82 (47.56%), Postives = 58/82 (70.73%), Query Frame = 0


Query: 64  RKLSKKKIIYNEQQEKQRDMYKESLQNARNALTLVSTLIATVTFSAGINPPGGFHQDGPL 123
           RK SKK  +    +  + +M+ E+LQNARN + +V+ LIA+V+++ GINPPGG +QDGP 
Sbjct: 377 RKKSKKHHVKRGHKSLEHEMHIEALQNARNTIAIVAVLIASVSYAGGINPPGGVYQDGPW 436

Query: 124 KGKAIFSKTKGYKVFMISNSMA 146
           KGK++   T  +KVF I N++A
Sbjct: 437 KGKSLVGNTAAFKVFAICNNIA 458

The following BLAST results are available for this feature:

BLAST of Lcy02g006260 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C7A2	2.2e-04	35.53	Ankyrin repeat-containing protein ITN1 OS=Arabidopsis thaliana OX=3702 GN=ITN1 P...	[more]

BLAST of Lcy02g006260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DJA0	7.5e-27	57.25	ankyrin repeat-containing protein ITN1-like OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A6J1DH91	6.3e-26	53.38	ankyrin repeat-containing protein At2g01680-like OS=Momordica charantia OX=3673 ...	[more]
A0A6J1DLC6	1.4e-25	53.57	ankyrin repeat-containing protein At5g02620-like OS=Momordica charantia OX=3673 ...	[more]
A0A6J1DJF7	1.8e-25	51.45	ankyrin repeat-containing protein ITN1-like OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A6J1DL07	3.1e-25	56.80	ankyrin repeat-containing protein At2g01680-like OS=Momordica charantia OX=3673 ...	[more]

BLAST of Lcy02g006260 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022153567.1	1.5e-26	57.25	ankyrin repeat-containing protein ITN1-like [Momordica charantia]	[more]
XP_022153605.1	1.3e-25	53.38	ankyrin repeat-containing protein At2g01680-like [Momordica charantia]	[more]
XP_022153656.1	2.9e-25	53.57	ankyrin repeat-containing protein At5g02620-like [Momordica charantia]	[more]
XP_022153622.1	3.8e-25	51.45	ankyrin repeat-containing protein ITN1-like [Momordica charantia]	[more]
XP_022153566.1	6.5e-25	56.80	ankyrin repeat-containing protein At2g01680-like [Momordica charantia]	[more]

BLAST of Lcy02g006260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G54710.1	1.4e-17	53.52	Ankyrin repeat family protein	[more]
AT1G10340.1	5.8e-16	47.56	Ankyrin repeat family protein	[more]
AT1G10340.2	5.8e-16	47.56	Ankyrin repeat family protein	[more]
AT2G24600.3	5.8e-16	47.56	Ankyrin repeat family protein	[more]
AT2G24600.4	5.8e-16	47.56	Ankyrin repeat family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 74..94
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 25..48
None	No IPR available	PANTHER	PTHR24177:SF291	ANKYRIN REPEAT FAMILY PROTEIN	coord: 49..145
None	No IPR available	PANTHER	PTHR24177	CASKIN	coord: 49..145
IPR026961	PGG domain	PFAM	PF13962	PGG	coord: 86..147 e-value: 1.3E-19 score: 70.1

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy02g006260.1	Lcy02g006260.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane