Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAGAAATCGAAAAAGAAAAATGGAAATGGCGACGAAGACCGATAACAGAGTGGATCGAAGGAGAAGAATTATGAGCAGAGAAATGGATCGAATGGCGGTCATCACCGGCCGCTTACGAAATCTGCCTCCCTCGCCACCGCCTTCTCCATCTTCCCCCTCGCCATTTCTTTACCATCAAACTCACCAACGCGGCCATTCGCACACCGGAATCTCCCCCTCCTTCTTCACCAAGGACCTCCACAAGAATCCTGATTCCGTTCCTATTTCTCGCATCCACGGTATGTTCTTCTTCTTTTGCGATTATTCGACTCTTCATGTTCTTTTTCCCCTCTACCGATTTAATTGTGATTTACAATCCAATTTTTTTTATTAATTTATTTGTTTTTCTTTTGTTATTGCTTAGTTATACTTGAACATTCATGGACGTATTAGAGATCGATTCTTTTTTCCCTACATTGTATACACCCATTGTAGGAAACGTTAGGATTTGTTATAACAATTGGATGAATTGATTTAGAACATTCATTGTTGAGGTATACAGAGATTTATATTTGCTAATCATGATCATTGCTTAAATATCAGGTTGAAATTTGCATTTCCTTTTGAAATTATTCATCACATGAATAAGATCATTATCCTGACACGGACATTAACTTTGACATATAGAAGATAACCACAATTTTGTGAGTCTATAACCATATATTTCATATTGAGCGAATTACCTTTGATTGACATGGAAGAAAATACTTTTTATCTCAATGTGGTTAGAAATAGGTTACTACATTATAATACAATTGTTTTTTTTTTTTAATGATAAAACCAACTTTCATGGAGAAAAAATGACCTCTTTAAAGGAAGGGGTGCCAATGAAGAATAATAGTACCTAGGGAATAATTACAAAAAGATTTGAATACCGAAACCCAAAAAGAAACATAAAACCTAGTAAGGACCCATACATCATTTGGGACCCTTTCAAGACCACGAAACACTCTATTATTTCTCTCACCCCATAAACCCCACAATAAAGCACACACCTAGTTAACCATAAAAATCTCCCCTTCTCATGAAATGGCGGATGGAGAAGATCTCCTCTCCTTGTAATCTCTAAAGCTCCTATCCTGAATCCCGAATGCAGTTGTAGAACGAACCCCACACCAAACGAGCAAACTCACAACTATATAGAATATGGTCCAGATATCTTCCTGCACCTTCCGATATAAAATGCAACAAAACTAACCTACTAAAGAAGTCATCTTCCTCGAAAGCTTGTCAATCGTTTTAGCTCTTTCGTGGATAACTTGCCAAATGAAAAACCTAATCTTCTTCCGAATTTTCACCCTCCACGGAATAGAAAAGACGGACTCACGGGGGAGAAGGGTTGAGCAGCAGCTTATATTACAATTGTGTTAATACTGATCAGATTTTGATCTGCTGATAATCGTATATTTGAGCATCTGTGAAGTTGGGAAGAACAATAAGAGAGACATTTTGTTAATTATGAAATTTTAACAGCAAACATCAATATGATCCATTAGTTTCTTTTCTTCTGTTTGATCATTATGCACTTTTCAATGCATAATGATTAAAAAAACTCAATAACAATATATCATAGCTCTGTCTTGGTCATTAGTTGTTCTCGTTTAAATCTTATGAAACAATGTGTCTGTTTAAGATTTTGTTTCTACAATCGATGAATTCGAGTTAAATTTGATTTGTAGTTTTACAAGAAAGAAGTCATTTTACTTTGGTTTGTAATTTCGCAGCTATTCCCAAGCCTAAAGATGAAAAAACTGCCCCTCCACTGAAGTATATTTCCAGCAATGAAGTCCCAGAAGAAAACAATGCTGCTGCTGCGGTAGGACGCCAAATCAGTATTAAAAAACTCGACCCCATTGGAGAAGTAAGCGCTGAAACAATGTTATCTCCAACTGCCTCAACAATGGTTCAGAAGGCCTCCTTTGATAGCAAACCACCACTGTCCAAAACAACACACCCCTCAAAGCCTAAACTCTTCACTTCAAAACGACTAAATGCCTCCATTATAGCTTCTCAAACCACACGAGTTCTCTGTTCGCTGATCATCGCGTCTTTGGCCGTTCTATCGCACGCCGTGAGGTCGGAGAGTGCAGCGGCCTCGAAGCCTCTCTACATTCTACTGCTCACCAACGCGACGATCATCGTGGCGAAAATGTTGGCTGAAAGACAGAAAGACAGCGGGGGGGAGGCAGAGGATCAGGGATGTGAGAAAATGAAGGAAGATGGACAAAACTGGGACTCAGCTGTGAAAGTTTTGGAGAGAGGTTTGGTGTTTTACCAAGCTTTTCGTGCCATTTTCATTGATTTTAGTGTTTATGCTGTGGTTGTTATTTGTGGCCTCTCTTTGCTGTAGCTTTATAATAATGTCTTTTGGTTTGATCTAGTGAACCATCTTCAGTTCTTTGGAGCTTAGCAGATGGATCACATTTTGAAAGATTTTTGTTTTGATTGTGTTTCTTTCTTTCAA
mRNA sequence
CAGAAATCGAAAAAGAAAAATGGAAATGGCGACGAAGACCGATAACAGAGTGGATCGAAGGAGAAGAATTATGAGCAGAGAAATGGATCGAATGGCGGTCATCACCGGCCGCTTACGAAATCTGCCTCCCTCGCCACCGCCTTCTCCATCTTCCCCCTCGCCATTTCTTTACCATCAAACTCACCAACGCGGCCATTCGCACACCGGAATCTCCCCCTCCTTCTTCACCAAGGACCTCCACAAGAATCCTGATTCCGTTCCTATTTCTCGCATCCACGCTATTCCCAAGCCTAAAGATGAAAAAACTGCCCCTCCACTGAAGTATATTTCCAGCAATGAAGTCCCAGAAGAAAACAATGCTGCTGCTGCGGTAGGACGCCAAATCAGTATTAAAAAACTCGACCCCATTGGAGAAGTAAGCGCTGAAACAATGTTATCTCCAACTGCCTCAACAATGGTTCAGAAGGCCTCCTTTGATAGCAAACCACCACTGTCCAAAACAACACACCCCTCAAAGCCTAAACTCTTCACTTCAAAACGACTAAATGCCTCCATTATAGCTTCTCAAACCACACGAGTTCTCTGTTCGCTGATCATCGCGTCTTTGGCCGTTCTATCGCACGCCGTGAGGTCGGAGAGTGCAGCGGCCTCGAAGCCTCTCTACATTCTACTGCTCACCAACGCGACGATCATCGTGGCGAAAATGTTGGCTGAAAGACAGAAAGACAGCGGGGGGGAGGCAGAGGATCAGGGATGTGAGAAAATGAAGGAAGATGGACAAAACTGGGACTCAGCTGTGAAAGTTTTGGAGAGAGGTTTGGTGTTTTACCAAGCTTTTCGTGCCATTTTCATTGATTTTAGTGTTTATGCTGTGGTTGTTATTTGTGGCCTCTCTTTGCTGTAGCTTTATAATAATGTCTTTTGGTTTGATCTAGTGAACCATCTTCAGTTCTTTGGAGCTTAGCAGATGGATCACATTTTGAAAGATTTTTGTTTTGATTGTGTTTCTTTCTTTCAA
Coding sequence (CDS)
ATGGAAATGGCGACGAAGACCGATAACAGAGTGGATCGAAGGAGAAGAATTATGAGCAGAGAAATGGATCGAATGGCGGTCATCACCGGCCGCTTACGAAATCTGCCTCCCTCGCCACCGCCTTCTCCATCTTCCCCCTCGCCATTTCTTTACCATCAAACTCACCAACGCGGCCATTCGCACACCGGAATCTCCCCCTCCTTCTTCACCAAGGACCTCCACAAGAATCCTGATTCCGTTCCTATTTCTCGCATCCACGCTATTCCCAAGCCTAAAGATGAAAAAACTGCCCCTCCACTGAAGTATATTTCCAGCAATGAAGTCCCAGAAGAAAACAATGCTGCTGCTGCGGTAGGACGCCAAATCAGTATTAAAAAACTCGACCCCATTGGAGAAGTAAGCGCTGAAACAATGTTATCTCCAACTGCCTCAACAATGGTTCAGAAGGCCTCCTTTGATAGCAAACCACCACTGTCCAAAACAACACACCCCTCAAAGCCTAAACTCTTCACTTCAAAACGACTAAATGCCTCCATTATAGCTTCTCAAACCACACGAGTTCTCTGTTCGCTGATCATCGCGTCTTTGGCCGTTCTATCGCACGCCGTGAGGTCGGAGAGTGCAGCGGCCTCGAAGCCTCTCTACATTCTACTGCTCACCAACGCGACGATCATCGTGGCGAAAATGTTGGCTGAAAGACAGAAAGACAGCGGGGGGGAGGCAGAGGATCAGGGATGTGAGAAAATGAAGGAAGATGGACAAAACTGGGACTCAGCTGTGAAAGTTTTGGAGAGAGGTTTGGTGTTTTACCAAGCTTTTCGTGCCATTTTCATTGATTTTAGTGTTTATGCTGTGGTTGTTATTTGTGGCCTCTCTTTGCTGTAG
Protein sequence
MEMATKTDNRVDRRRRIMSREMDRMAVITGRLRNLPPSPPPSPSSPSPFLYHQTHQRGHSHTGISPSFFTKDLHKNPDSVPISRIHAIPKPKDEKTAPPLKYISSNEVPEENNAAAAVGRQISIKKLDPIGEVSAETMLSPTASTMVQKASFDSKPPLSKTTHPSKPKLFTSKRLNASIIASQTTRVLCSLIIASLAVLSHAVRSESAAASKPLYILLLTNATIIVAKMLAERQKDSGGEAEDQGCEKMKEDGQNWDSAVKVLERGLVFYQAFRAIFIDFSVYAVVVICGLSLL
Homology
BLAST of Lcy02g006060 vs. ExPASy TrEMBL
Match:
A0A0A0L815 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G481250 PE=4 SV=1)
HSP 1 Score: 391.3 bits (1004), Expect = 3.4e-105
Identity = 223/304 (73.36%), Postives = 247/304 (81.25%), Query Frame = 0
Query: 1 MEMATKTDNRVDRRRRIMSREMDRMAVITGRLRNLPPSPPPSPSSPSPFLYHQTHQRGHS 60
MEMATK +NR DRRRRIMSRE+DRMA+ITGRLRNLPPSPPPSPSSPSPFLYHQTHQRGHS
Sbjct: 1 MEMATKIENRTDRRRRIMSREIDRMALITGRLRNLPPSPPPSPSSPSPFLYHQTHQRGHS 60
Query: 61 HTGISPSFFTKDLHKNPDSVPISRIHAIPKPKDEKTAPPLKYISSNEVPEENNAAAAVGR 120
HTGISPSFF+KD+H NPDS P+ +PKPKD K P LK +S +E EE AA+G
Sbjct: 61 HTGISPSFFSKDIHANPDSPPLPNAQGVPKPKDAKATPLLKRLSMSEAREEK--IAAIGF 120
Query: 121 QISIKKLDPIGEVSAETMLSPTASTMVQKASFDSKPPLSKTTHPSKPKLFTSKRLNASII 180
QI+ KKLDPIGE+ ET+ +P+AS+MVQK + L K HPSKPKLFTSKRLNASI+
Sbjct: 121 QINHKKLDPIGEIHTETVSTPSASSMVQKVTSTDNEILLK-AHPSKPKLFTSKRLNASIL 180
Query: 181 ASQTTRVLCSLIIASLAVLSHA----------VRSESAAASKPLYILLLTNATIIVAKML 240
ASQTTRV CSLIIASLAVLSH VRSE ASKPLYILLLT+ATI+VA+ML
Sbjct: 181 ASQTTRVFCSLIIASLAVLSHVNHPLSMIWKMVRSERVVASKPLYILLLTDATIVVARML 240
Query: 241 AERQKDSGGEAEDQGCEKMKEDGQNWDSAVKVLERGLVFYQAFRAIFIDFSVYAVVVICG 295
A RQKDS EAE++ EKMKEDG NWDSAVKVLERGLVFYQAFRAIFIDFSVYAVVVICG
Sbjct: 241 AARQKDS-REAEEES-EKMKEDGHNWDSAVKVLERGLVFYQAFRAIFIDFSVYAVVVICG 299
BLAST of Lcy02g006060 vs. ExPASy TrEMBL
Match:
A0A1S3BH05 (uncharacterized protein LOC103489936 OS=Cucumis melo OX=3656 GN=LOC103489936 PE=4 SV=1)
HSP 1 Score: 385.6 bits (989), Expect = 1.9e-103
Identity = 224/307 (72.96%), Postives = 249/307 (81.11%), Query Frame = 0
Query: 1 MEMATKTDNRVDRRRRIMSREMDRMAVITGRLRNLPPSPPPSPSSPSPFLYHQTHQRGHS 60
MEM TKTDNR +RRRRI+SREMDRMA+ITGRL NLPPSPPPSPSSPSPFL+HQTHQRGHS
Sbjct: 1 MEMPTKTDNRTERRRRIISREMDRMALITGRLPNLPPSPPPSPSSPSPFLFHQTHQRGHS 60
Query: 61 HTGISPSFFTKDL--HKNPDSVPISRIHAIPKPKDEKTAPPLKYISSNEVPEENNAAAAV 120
HTGISPSFF+KDL H NPDS+P IPKPKD K P LK +S +E EE AA+
Sbjct: 61 HTGISPSFFSKDLHNHNNPDSLPFPNAQGIPKPKDAKATPLLKRLSMSEAREEK--IAAI 120
Query: 121 GRQISIKKLDPIGEVSAETMLSPTASTMVQK-ASFDSKPPLSKTTHPSKPKLFTSKRLNA 180
G Q + KKLDPIGEV ET+ +P+AS+MVQK S D K L THPSKPKLFTSKR+NA
Sbjct: 121 GFQFNHKKLDPIGEVHTETVSTPSASSMVQKITSIDDKILLK--THPSKPKLFTSKRINA 180
Query: 181 SIIASQTTRVLCSLIIASLAVLSHA----------VRSESAAASKPLYILLLTNATIIVA 240
SI+ASQTTRV CSLIIASL+VLSH VRSES ASKPLYILLLT+ATI++A
Sbjct: 181 SILASQTTRVFCSLIIASLSVLSHVNHPLSIIWNMVRSESVVASKPLYILLLTDATIVLA 240
Query: 241 KMLAERQKDSGGEAEDQGCEKMKEDGQNWDSAVKVLERGLVFYQAFRAIFIDFSVYAVVV 295
+MLAERQKD GG AE++ EKMKEDG+NWDSAVKVLERGLVFYQAFRAIFIDFSVYAVVV
Sbjct: 241 RMLAERQKD-GGVAEEE-IEKMKEDGRNWDSAVKVLERGLVFYQAFRAIFIDFSVYAVVV 300
BLAST of Lcy02g006060 vs. ExPASy TrEMBL
Match:
A0A6J1KF67 (uncharacterized protein LOC111493320 OS=Cucurbita maxima OX=3661 GN=LOC111493320 PE=4 SV=1)
HSP 1 Score: 376.3 bits (965), Expect = 1.1e-100
Identity = 221/304 (72.70%), Postives = 248/304 (81.58%), Query Frame = 0
Query: 1 MEMATKTDNRVDRRRRIMSREMDRMAVITGRLRNLPPSPPPSPSSPSPFLYHQTHQRGHS 60
MEMATKTD R +RRRRI SRE DRMA+ITGRLRNLPPSPPPSPSSP PF +H THQRGHS
Sbjct: 1 MEMATKTDVRAERRRRISSREGDRMALITGRLRNLPPSPPPSPSSP-PFFHHYTHQRGHS 60
Query: 61 HTGISPSFFTKDLHKNPDSVPISRIHAIPKPKDEKTAPPLKYISSNEVPEENNAAAAVGR 120
HTGI+PSFF KD HKNPDS P+ + H + KPKDEK P LK+IS NEV NN AA+
Sbjct: 61 HTGINPSFFAKDTHKNPDSGPLPQNHDVSKPKDEKAPPLLKHISINEV--HNN--AAIEY 120
Query: 121 QISIKKLDPIGEVSAETMLSPTASTMVQKASFDSKPPLSKTTHPSKPKLFTSKRLNASII 180
Q + KKLDPIGE S E +LSP++ TMVQKA D++ PL K T PSKP+L TSKRLNASI+
Sbjct: 121 QFNPKKLDPIGEGSTELILSPSSVTMVQKACIDNE-PLPK-TKPSKPRLITSKRLNASIL 180
Query: 181 ASQTTRVLCSLIIASLAVLS----------HAVRSESAAASKPLYILLLTNATIIVAKML 240
ASQTTRV CSLIIASLA+LS + VRSE+ ASKPLYILLLTNATI+VA+ML
Sbjct: 181 ASQTTRVFCSLIIASLAILSQVDIPLTIIRNTVRSETVMASKPLYILLLTNATIVVARML 240
Query: 241 AERQKDSGGEAEDQGCEKMKEDGQNWDSAVKVLERGLVFYQAFRAIFIDFSVYAVVVICG 295
AE+QKD GEAE++ CEKMKED QNWDSAVKVLERGLVFYQAFRA+FIDFSVYAVVVICG
Sbjct: 241 AEKQKDR-GEAEEE-CEKMKEDAQNWDSAVKVLERGLVFYQAFRAVFIDFSVYAVVVICG 295
BLAST of Lcy02g006060 vs. ExPASy TrEMBL
Match:
A0A6J1GB34 (uncharacterized protein LOC111452396 OS=Cucurbita moschata OX=3662 GN=LOC111452396 PE=4 SV=1)
HSP 1 Score: 374.8 bits (961), Expect = 3.3e-100
Identity = 221/304 (72.70%), Postives = 247/304 (81.25%), Query Frame = 0
Query: 1 MEMATKTDNRVDRRRRIMSREMDRMAVITGRLRNLPPSPPPSPSSPSPFLYHQTHQRGHS 60
MEMATKTD R +RRRRI SRE DRMA+ITGRLRNLPPSPPPSPSSP PF +H THQRGHS
Sbjct: 1 MEMATKTDVRAERRRRISSREGDRMALITGRLRNLPPSPPPSPSSP-PFFHHYTHQRGHS 60
Query: 61 HTGISPSFFTKDLHKNPDSVPISRIHAIPKPKDEKTAPPLKYISSNEVPEENNAAAAVGR 120
HTGI+PSFF KD HKNPDS P+ + H + KPKDEK P LK+IS NEV NN AA+
Sbjct: 61 HTGINPSFFAKDTHKNPDSGPLPQNHDVSKPKDEKAPPLLKHISINEV--HNN--AAIEY 120
Query: 121 QISIKKLDPIGEVSAETMLSPTASTMVQKASFDSKPPLSKTTHPSKPKLFTSKRLNASII 180
Q + KKLDPIGE S E +LSP++ TMVQKA D++ PL K T PSKP+L TSKRLNASI+
Sbjct: 121 QFNPKKLDPIGEGSTELILSPSSVTMVQKACIDNE-PLPK-TKPSKPRLITSKRLNASIL 180
Query: 181 ASQTTRVLCSLIIASLAVLS----------HAVRSESAAASKPLYILLLTNATIIVAKML 240
ASQTTRV CSLIIASLA+LS + VRSE+ ASKPLYILLLTNATI+VA+ML
Sbjct: 181 ASQTTRVFCSLIIASLAILSQVDIPLTIIRNIVRSETVMASKPLYILLLTNATIVVARML 240
Query: 241 AERQKDSGGEAEDQGCEKMKEDGQNWDSAVKVLERGLVFYQAFRAIFIDFSVYAVVVICG 295
AE+QKD GEAE++ CEKMKED QNWDSAVKVLERGLVFYQAFRA FIDFSVYAVVVICG
Sbjct: 241 AEKQKDR-GEAEEE-CEKMKEDAQNWDSAVKVLERGLVFYQAFRAFFIDFSVYAVVVICG 295
BLAST of Lcy02g006060 vs. ExPASy TrEMBL
Match:
A0A6J1J0I6 (uncharacterized protein LOC111480128 OS=Cucurbita maxima OX=3661 GN=LOC111480128 PE=4 SV=1)
HSP 1 Score: 364.4 bits (934), Expect = 4.5e-97
Identity = 213/304 (70.07%), Postives = 244/304 (80.26%), Query Frame = 0
Query: 1 MEMATKTDNRVDRRRRIMSREMDRMAVITGRLRNLPPSPPPSPSSPSPFLYHQTHQRGHS 60
MEMATKTD+R +RR++I S+E DRMA+ITGRLR LPPSPPPSPSSPSPFL +Q HQRGHS
Sbjct: 1 MEMATKTDSRAERRQKIRSKETDRMALITGRLRTLPPSPPPSPSSPSPFLQYQIHQRGHS 60
Query: 61 HTGISPSFFTKDLHKNPDSVPISRIHAIPKPKDEKTAPPLKYISSNEVPEENNAAAAVGR 120
HTGISPSF +K+L KNPDS+P+ +HAIPK KD P K++ NEV EE A G
Sbjct: 61 HTGISPSFLSKELQKNPDSLPLRPVHAIPKLKDGTAVPLPKHMPINEVQEEK--ITATGF 120
Query: 121 QISIKKLDPIGEVSAETMLSPTASTMVQKASFDSKPPLSKTTHPSKPKLFTSKRLNASII 180
QI+ KK+DPIGEV E M+SP+A MVQKA+ ++ PLSK PSKP++FTSKRLN SI+
Sbjct: 121 QINDKKIDPIGEVCKE-MISPSALPMVQKATIVNE-PLSK-PQPSKPRIFTSKRLNVSIL 180
Query: 181 ASQTTRVLCSLIIASLAVLSHA----------VRSESAAASKPLYILLLTNATIIVAKML 240
ASQT RV CSLIIASLA+LSH V SES ASKPLYILLLTN TI+VA+ML
Sbjct: 181 ASQTKRVFCSLIIASLAILSHVDHPLFTIRNIVSSESVMASKPLYILLLTNVTIVVARML 240
Query: 241 AERQKDSGGEAEDQGCEKMKEDGQNWDSAVKVLERGLVFYQAFRAIFIDFSVYAVVVICG 295
A+RQK GGEAE++ CEKMKEDGQNW+SAVKVLERGLVFYQAFRAIFIDFSVYAVVVICG
Sbjct: 241 ADRQK-HGGEAEEE-CEKMKEDGQNWESAVKVLERGLVFYQAFRAIFIDFSVYAVVVICG 297
BLAST of Lcy02g006060 vs. NCBI nr
Match:
XP_038890203.1 (uncharacterized protein LOC120079844 [Benincasa hispida])
HSP 1 Score: 397.5 bits (1020), Expect = 9.9e-107
Identity = 223/304 (73.36%), Postives = 256/304 (84.21%), Query Frame = 0
Query: 1 MEMATKTDNRVDRRRRIMSREMDRMAVITGRLRNLPPSPPPSPSSPSPFLYHQTHQRGHS 60
MEMATKTD+R +RRRRI+SRE+DRMA+ITGRLRNLPPSPPPSPSSPSPFL+HQTHQRG+S
Sbjct: 1 MEMATKTDSRKERRRRIVSREVDRMALITGRLRNLPPSPPPSPSSPSPFLFHQTHQRGYS 60
Query: 61 HTGISPSFFTKDLHKNPDSVPISRIHAIPKPKDEKTAPPLKYISSNEVPEENNAAAAVGR 120
HTGISPSFF+K+LHKNPDS+P+S IHAIPKP+D K P LK++S EV EE +A+G
Sbjct: 61 HTGISPSFFSKELHKNPDSIPLSHIHAIPKPEDGKATPLLKHMSMKEVQEEK--ISAIGY 120
Query: 121 QISIKKLDPIGEVSAETMLSPTASTMVQKASFDSKPPLSKTTHPSKPKLFTSKRLNASII 180
Q+S KKLDPIGEV E + +P+A +MVQK S D++ T PSKPKLFTSKRLNA I+
Sbjct: 121 QMSHKKLDPIGEVHTEIVSTPSALSMVQKVSIDNE--TRSKTQPSKPKLFTSKRLNACIL 180
Query: 181 ASQTTRVLCSLIIASLAVLS----------HAVRSESAAASKPLYILLLTNATIIVAKML 240
ASQTTRV CSLI+ASLA+LS + VRSES ASKPLYILLLTNATI+VA+ML
Sbjct: 181 ASQTTRVFCSLILASLAILSQVDHPLFIIRNIVRSESVVASKPLYILLLTNATIVVARML 240
Query: 241 AERQKDSGGEAEDQGCEKMKEDGQNWDSAVKVLERGLVFYQAFRAIFIDFSVYAVVVICG 295
AE+QKDS GEAE++ EKMKEDG NWDSAVKVLERGLVFYQAFRAIFIDFSVYAVVVICG
Sbjct: 241 AEKQKDS-GEAEEE-LEKMKEDGHNWDSAVKVLERGLVFYQAFRAIFIDFSVYAVVVICG 298
BLAST of Lcy02g006060 vs. NCBI nr
Match:
XP_004150355.1 (uncharacterized protein LOC101203675 [Cucumis sativus] >KGN58065.1 hypothetical protein Csa_023413 [Cucumis sativus])
HSP 1 Score: 391.3 bits (1004), Expect = 7.1e-105
Identity = 223/304 (73.36%), Postives = 247/304 (81.25%), Query Frame = 0
Query: 1 MEMATKTDNRVDRRRRIMSREMDRMAVITGRLRNLPPSPPPSPSSPSPFLYHQTHQRGHS 60
MEMATK +NR DRRRRIMSRE+DRMA+ITGRLRNLPPSPPPSPSSPSPFLYHQTHQRGHS
Sbjct: 1 MEMATKIENRTDRRRRIMSREIDRMALITGRLRNLPPSPPPSPSSPSPFLYHQTHQRGHS 60
Query: 61 HTGISPSFFTKDLHKNPDSVPISRIHAIPKPKDEKTAPPLKYISSNEVPEENNAAAAVGR 120
HTGISPSFF+KD+H NPDS P+ +PKPKD K P LK +S +E EE AA+G
Sbjct: 61 HTGISPSFFSKDIHANPDSPPLPNAQGVPKPKDAKATPLLKRLSMSEAREEK--IAAIGF 120
Query: 121 QISIKKLDPIGEVSAETMLSPTASTMVQKASFDSKPPLSKTTHPSKPKLFTSKRLNASII 180
QI+ KKLDPIGE+ ET+ +P+AS+MVQK + L K HPSKPKLFTSKRLNASI+
Sbjct: 121 QINHKKLDPIGEIHTETVSTPSASSMVQKVTSTDNEILLK-AHPSKPKLFTSKRLNASIL 180
Query: 181 ASQTTRVLCSLIIASLAVLSHA----------VRSESAAASKPLYILLLTNATIIVAKML 240
ASQTTRV CSLIIASLAVLSH VRSE ASKPLYILLLT+ATI+VA+ML
Sbjct: 181 ASQTTRVFCSLIIASLAVLSHVNHPLSMIWKMVRSERVVASKPLYILLLTDATIVVARML 240
Query: 241 AERQKDSGGEAEDQGCEKMKEDGQNWDSAVKVLERGLVFYQAFRAIFIDFSVYAVVVICG 295
A RQKDS EAE++ EKMKEDG NWDSAVKVLERGLVFYQAFRAIFIDFSVYAVVVICG
Sbjct: 241 AARQKDS-REAEEES-EKMKEDGHNWDSAVKVLERGLVFYQAFRAIFIDFSVYAVVVICG 299
BLAST of Lcy02g006060 vs. NCBI nr
Match:
XP_008447503.1 (PREDICTED: uncharacterized protein LOC103489936 [Cucumis melo])
HSP 1 Score: 385.6 bits (989), Expect = 3.9e-103
Identity = 224/307 (72.96%), Postives = 249/307 (81.11%), Query Frame = 0
Query: 1 MEMATKTDNRVDRRRRIMSREMDRMAVITGRLRNLPPSPPPSPSSPSPFLYHQTHQRGHS 60
MEM TKTDNR +RRRRI+SREMDRMA+ITGRL NLPPSPPPSPSSPSPFL+HQTHQRGHS
Sbjct: 1 MEMPTKTDNRTERRRRIISREMDRMALITGRLPNLPPSPPPSPSSPSPFLFHQTHQRGHS 60
Query: 61 HTGISPSFFTKDL--HKNPDSVPISRIHAIPKPKDEKTAPPLKYISSNEVPEENNAAAAV 120
HTGISPSFF+KDL H NPDS+P IPKPKD K P LK +S +E EE AA+
Sbjct: 61 HTGISPSFFSKDLHNHNNPDSLPFPNAQGIPKPKDAKATPLLKRLSMSEAREEK--IAAI 120
Query: 121 GRQISIKKLDPIGEVSAETMLSPTASTMVQK-ASFDSKPPLSKTTHPSKPKLFTSKRLNA 180
G Q + KKLDPIGEV ET+ +P+AS+MVQK S D K L THPSKPKLFTSKR+NA
Sbjct: 121 GFQFNHKKLDPIGEVHTETVSTPSASSMVQKITSIDDKILLK--THPSKPKLFTSKRINA 180
Query: 181 SIIASQTTRVLCSLIIASLAVLSHA----------VRSESAAASKPLYILLLTNATIIVA 240
SI+ASQTTRV CSLIIASL+VLSH VRSES ASKPLYILLLT+ATI++A
Sbjct: 181 SILASQTTRVFCSLIIASLSVLSHVNHPLSIIWNMVRSESVVASKPLYILLLTDATIVLA 240
Query: 241 KMLAERQKDSGGEAEDQGCEKMKEDGQNWDSAVKVLERGLVFYQAFRAIFIDFSVYAVVV 295
+MLAERQKD GG AE++ EKMKEDG+NWDSAVKVLERGLVFYQAFRAIFIDFSVYAVVV
Sbjct: 241 RMLAERQKD-GGVAEEE-IEKMKEDGRNWDSAVKVLERGLVFYQAFRAIFIDFSVYAVVV 300
BLAST of Lcy02g006060 vs. NCBI nr
Match:
XP_022998749.1 (uncharacterized protein LOC111493320 [Cucurbita maxima])
HSP 1 Score: 376.3 bits (965), Expect = 2.4e-100
Identity = 221/304 (72.70%), Postives = 248/304 (81.58%), Query Frame = 0
Query: 1 MEMATKTDNRVDRRRRIMSREMDRMAVITGRLRNLPPSPPPSPSSPSPFLYHQTHQRGHS 60
MEMATKTD R +RRRRI SRE DRMA+ITGRLRNLPPSPPPSPSSP PF +H THQRGHS
Sbjct: 1 MEMATKTDVRAERRRRISSREGDRMALITGRLRNLPPSPPPSPSSP-PFFHHYTHQRGHS 60
Query: 61 HTGISPSFFTKDLHKNPDSVPISRIHAIPKPKDEKTAPPLKYISSNEVPEENNAAAAVGR 120
HTGI+PSFF KD HKNPDS P+ + H + KPKDEK P LK+IS NEV NN AA+
Sbjct: 61 HTGINPSFFAKDTHKNPDSGPLPQNHDVSKPKDEKAPPLLKHISINEV--HNN--AAIEY 120
Query: 121 QISIKKLDPIGEVSAETMLSPTASTMVQKASFDSKPPLSKTTHPSKPKLFTSKRLNASII 180
Q + KKLDPIGE S E +LSP++ TMVQKA D++ PL K T PSKP+L TSKRLNASI+
Sbjct: 121 QFNPKKLDPIGEGSTELILSPSSVTMVQKACIDNE-PLPK-TKPSKPRLITSKRLNASIL 180
Query: 181 ASQTTRVLCSLIIASLAVLS----------HAVRSESAAASKPLYILLLTNATIIVAKML 240
ASQTTRV CSLIIASLA+LS + VRSE+ ASKPLYILLLTNATI+VA+ML
Sbjct: 181 ASQTTRVFCSLIIASLAILSQVDIPLTIIRNTVRSETVMASKPLYILLLTNATIVVARML 240
Query: 241 AERQKDSGGEAEDQGCEKMKEDGQNWDSAVKVLERGLVFYQAFRAIFIDFSVYAVVVICG 295
AE+QKD GEAE++ CEKMKED QNWDSAVKVLERGLVFYQAFRA+FIDFSVYAVVVICG
Sbjct: 241 AEKQKDR-GEAEEE-CEKMKEDAQNWDSAVKVLERGLVFYQAFRAVFIDFSVYAVVVICG 295
BLAST of Lcy02g006060 vs. NCBI nr
Match:
XP_022948865.1 (uncharacterized protein LOC111452396 [Cucurbita moschata])
HSP 1 Score: 374.8 bits (961), Expect = 6.9e-100
Identity = 221/304 (72.70%), Postives = 247/304 (81.25%), Query Frame = 0
Query: 1 MEMATKTDNRVDRRRRIMSREMDRMAVITGRLRNLPPSPPPSPSSPSPFLYHQTHQRGHS 60
MEMATKTD R +RRRRI SRE DRMA+ITGRLRNLPPSPPPSPSSP PF +H THQRGHS
Sbjct: 1 MEMATKTDVRAERRRRISSREGDRMALITGRLRNLPPSPPPSPSSP-PFFHHYTHQRGHS 60
Query: 61 HTGISPSFFTKDLHKNPDSVPISRIHAIPKPKDEKTAPPLKYISSNEVPEENNAAAAVGR 120
HTGI+PSFF KD HKNPDS P+ + H + KPKDEK P LK+IS NEV NN AA+
Sbjct: 61 HTGINPSFFAKDTHKNPDSGPLPQNHDVSKPKDEKAPPLLKHISINEV--HNN--AAIEY 120
Query: 121 QISIKKLDPIGEVSAETMLSPTASTMVQKASFDSKPPLSKTTHPSKPKLFTSKRLNASII 180
Q + KKLDPIGE S E +LSP++ TMVQKA D++ PL K T PSKP+L TSKRLNASI+
Sbjct: 121 QFNPKKLDPIGEGSTELILSPSSVTMVQKACIDNE-PLPK-TKPSKPRLITSKRLNASIL 180
Query: 181 ASQTTRVLCSLIIASLAVLS----------HAVRSESAAASKPLYILLLTNATIIVAKML 240
ASQTTRV CSLIIASLA+LS + VRSE+ ASKPLYILLLTNATI+VA+ML
Sbjct: 181 ASQTTRVFCSLIIASLAILSQVDIPLTIIRNIVRSETVMASKPLYILLLTNATIVVARML 240
Query: 241 AERQKDSGGEAEDQGCEKMKEDGQNWDSAVKVLERGLVFYQAFRAIFIDFSVYAVVVICG 295
AE+QKD GEAE++ CEKMKED QNWDSAVKVLERGLVFYQAFRA FIDFSVYAVVVICG
Sbjct: 241 AEKQKDR-GEAEEE-CEKMKEDAQNWDSAVKVLERGLVFYQAFRAFFIDFSVYAVVVICG 295
BLAST of Lcy02g006060 vs. TAIR 10
Match:
AT1G52343.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )
HSP 1 Score: 102.1 bits (253), Expect = 8.0e-22
Identity = 106/296 (35.81%), Postives = 153/296 (51.69%), Query Frame = 0
Query: 9 NRVDRRRRIMSREMDRMAVITGRLRNLPPSPPPSPSSPSPFLYHQTHQRGHSHTGISPSF 68
+R +RRRRIM R DR+A+ITG+L NL PS P S SS S +H R +S + +
Sbjct: 4 DREERRRRIMERGSDRLALITGQLHNLDPSSPSSSSSSS-----ASHNRTYSESFMPQ-- 63
Query: 69 FTKDLHKNPDSVPISRIHAIPKPKDEKTAPPLKYISSNEV---PEENNAAAAVGRQISIK 128
TK H H I + +P LKY EV EE + + + +
Sbjct: 64 -TKSDH-----------HQILE------SPSLKYQFKEEVKARSEEPKLSTVLHKPL--- 123
Query: 129 KLDPIGEVSAETMLSPTASTMVQKASFDSKPPLSKTTHPSKPKLFTSKRLNASIIASQTT 188
K++P + A T QK+ ++ P+ F+SK+LNASII+S+ T
Sbjct: 124 KIEPTKQEEA---------TRSQKS--QNQRPIC---------FFSSKKLNASIISSERT 183
Query: 189 RVLCSLIIASLAVL---SHAVRSESAAASKPLYILLLTNATIIVAKMLAERQKDSGG--- 248
R L SL IA+ VL + S + A +PL++L+LT+ I+++ + E SGG
Sbjct: 184 RSLSSLTIAAFVVLLPRLNITSSNTILALRPLWLLILTDCAIVMSHLTTEA---SGGGLS 243
Query: 249 -EAEDQGCEKMKEDGQNWDSAVKVLERGLVFYQAFRAIFIDFSVY-AVVVICGLSL 294
E E+ G + +G+NW A ++LERG+V YQA R +FID S+Y VVVI G SL
Sbjct: 244 HEMEEDGKGRDGNNGENWSDAERLLERGVVVYQALRGMFIDCSLYMVVVVIFGASL 248
BLAST of Lcy02g006060 vs. TAIR 10
Match:
AT4G32680.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52343.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )
HSP 1 Score: 65.5 bits (158), Expect = 8.3e-11
Identity = 84/308 (27.27%), Postives = 139/308 (45.13%), Query Frame = 0
Query: 7 TDNRVDRRRRIMSREMDRMAVITGRLRNLPPSPPPSPSSPSPFLYHQTHQRGHSHTGISP 66
+++R RRR+I+ R DR+A ITG++ + PSPPPS S+ S +S
Sbjct: 3 SNSREARRRKILDRGSDRLAFITGQINGV-PSPPPSDSTSS----------------LSQ 62
Query: 67 SFFTKDLHKNPDSVPISRIHAIPKPKDE-KTAPPLKYISSNEVPEENNAAAAVGRQISIK 126
S D PD++P P+D+ A + + S + + V I
Sbjct: 63 SDLQTD-QSLPDTIP---------PRDQILKAQEIAFTSHQDNISDAAMLENVDHIIHQS 122
Query: 127 KLDPI-GEVSAETMLSPTASTMVQKASFDSKPPLSKTTHPSKPKL--------------- 186
+ +P+ + AET+ +AS + P S +PS L
Sbjct: 123 REEPLQPQRHAETLAEASASDPRDTTTIQPPPTTSSVQNPSVVDLGASQAFIPVVSFVNA 182
Query: 187 FTSKRLNASIIASQTTRVLCSLIIASLAVLSHAVRSE--SAAASKPLYILLLTNATIIVA 246
T K + A+I AS+ R+ +L IA + +LSH S + + +P+++L+LT+ATI++
Sbjct: 183 ITPKHIGAAIDASEYARMFTALAIALVVILSHLGFSSLGNIVSFRPVFLLVLTDATIVLG 242
Query: 247 KMLAERQKD----SGGEAEDQGCEKMKEDGQNWDSAVKVLERGLVFYQAFRAIFIDFSVY 292
++L + D SG QG D LE ++ + A+ +DFS+Y
Sbjct: 243 RVLLSHRGDSSSASGTVMSGQGIV---------DQVGNALETVMMVKKIMDALLMDFSLY 274
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0L815 | 3.4e-105 | 73.36 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G481250 PE=4 SV=1 | [more] |
A0A1S3BH05 | 1.9e-103 | 72.96 | uncharacterized protein LOC103489936 OS=Cucumis melo OX=3656 GN=LOC103489936 PE=... | [more] |
A0A6J1KF67 | 1.1e-100 | 72.70 | uncharacterized protein LOC111493320 OS=Cucurbita maxima OX=3661 GN=LOC111493320... | [more] |
A0A6J1GB34 | 3.3e-100 | 72.70 | uncharacterized protein LOC111452396 OS=Cucurbita moschata OX=3662 GN=LOC1114523... | [more] |
A0A6J1J0I6 | 4.5e-97 | 70.07 | uncharacterized protein LOC111480128 OS=Cucurbita maxima OX=3661 GN=LOC111480128... | [more] |
Match Name | E-value | Identity | Description | |
XP_038890203.1 | 9.9e-107 | 73.36 | uncharacterized protein LOC120079844 [Benincasa hispida] | [more] |
XP_004150355.1 | 7.1e-105 | 73.36 | uncharacterized protein LOC101203675 [Cucumis sativus] >KGN58065.1 hypothetical ... | [more] |
XP_008447503.1 | 3.9e-103 | 72.96 | PREDICTED: uncharacterized protein LOC103489936 [Cucumis melo] | [more] |
XP_022998749.1 | 2.4e-100 | 72.70 | uncharacterized protein LOC111493320 [Cucurbita maxima] | [more] |
XP_022948865.1 | 6.9e-100 | 72.70 | uncharacterized protein LOC111452396 [Cucurbita moschata] | [more] |
Match Name | E-value | Identity | Description | |
AT1G52343.1 | 8.0e-22 | 35.81 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |
AT4G32680.1 | 8.3e-11 | 27.27 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |