Homology
BLAST of Lcy02g005660 vs. ExPASy Swiss-Prot
Match:
Q8GW57 (Pentatricopeptide repeat-containing protein At1g80150, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g80150 PE=2 SV=2)
HSP 1 Score: 533.9 bits (1374), Expect = 1.6e-150
Identity = 266/402 (66.17%), Postives = 321/402 (79.85%), Query Frame = 0
Query: 1 MLSLRPIRRFCH----AATVI--VSTETPAAVLNQVQSSKPVEEPALVKLKAERDPEKLF 60
MLSLR IRRFCH AAT I VSTE+ NQ+Q KP+EEPALVKLK+ERDPEKL+
Sbjct: 1 MLSLRHIRRFCHFPSSAATGIAYVSTES-----NQIQGLKPLEEPALVKLKSERDPEKLY 60
Query: 61 HLFKANAHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIML 120
+LFKANA NRLVIENRFAFEDTVSRLAGA R D+IE LLEHQKTLPQGRREGFI+RIIML
Sbjct: 61 NLFKANATNRLVIENRFAFEDTVSRLAGAGRLDFIEDLLEHQKTLPQGRREGFIVRIIML 120
Query: 121 YGKAEMIKHAVDTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALEAFLREVPEKFNIEL 180
YGKA M K A+DTF++M LYGC+R+VKSFNA L+VL DL + FL + P K+ I++
Sbjct: 121 YGKAGMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDI 180
Query: 181 DIISVNIVVKAFCDMGIFDRAYLLMLEMEKLGIRPDVVTYTTLISALYKDNRCEISNGLW 240
D +S NI +K+FC++GI D AY+ M EMEK G+ PDVVTYTTLISALYK RC I NGLW
Sbjct: 181 DAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLW 240
Query: 241 NLMVLRGCLPNLASFNVRIQYLVNRRRAWEANKLMNVMRNIGIVPDEVTYNLVIKGFCQA 300
NLMVL+GC PNL +FNVRIQ+LVNRRRAW+AN L+ +M + + PD +TYN+VIKGF A
Sbjct: 241 NLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLA 300
Query: 301 GFLEMAKRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTI 360
F +MA+RVY+A+HG GYKPN+KIYQTMIHYLC++G+F+LAYTMCKD M K W+PN+DT+
Sbjct: 301 RFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTV 360
Query: 361 HSLLKGLKKMGQPGKAQLILTLARKRVPPFSTAQLEALNTTL 397
LLKGL K GQ +A+ I+ L +RVPPF + QL +L + L
Sbjct: 361 EMLLKGLVKKGQLDQAKSIMELVHRRVPPFRSKQLLSLKSIL 397
BLAST of Lcy02g005660 vs. ExPASy Swiss-Prot
Match:
Q9M065 (Pentatricopeptide repeat-containing protein At4g36680, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g36680 PE=1 SV=1)
HSP 1 Score: 219.2 bits (557), Expect = 8.6e-56
Identity = 125/384 (32.55%), Postives = 212/384 (55.21%), Query Frame = 0
Query: 2 LSLRPIRRFCHAATVIVSTETPAAVLNQVQSSKPVEEPALVKLKAERDPEKLFHLF-KAN 61
+SLR +RRF AA T A ++ SK A L+ E DP+K ++ +
Sbjct: 6 ISLRLVRRFASAA---ADGTTTAPSSGKISVSK-----AKSTLRKEHDPDKALKIYANVS 65
Query: 62 AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 121
H+ + +R+A E TV RLA RRF IE L+E K P+ + E F +I YG+A M
Sbjct: 66 DHSASPVSSRYAQELTVRRLAKCRRFSDIETLIESHKNDPKIKEEPFYSTLIRSYGQASM 125
Query: 122 IKHAVDTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALEAFLREVPEKFN-IELDIISV 181
HA+ TF M YG R+ SFNA+L + +++ + E+P+++N I D IS
Sbjct: 126 FNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISY 185
Query: 182 NIVVKAFCDMGIFDRAYLLMLEMEKLGIRPDVVTYTTLISALYKDNRCEISNGLWNLMVL 241
I++K++CD G ++A +M +M+ G+ + +TT++S+LYK E+++ LWN MV
Sbjct: 186 GILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVK 245
Query: 242 RGCLPNLASFNVRIQYLVNRRRAWEANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLEM 301
+GC + A++NVRI + +L+ M ++G+ PD ++YN ++ +C+ G L+
Sbjct: 246 KGCELDNAAYNVRIM-SAQKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDE 305
Query: 302 AKRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHSLLK 361
AK+VY L G+ PN ++T+I +LC S + Y + K ++ + P+ +T+ L+
Sbjct: 306 AKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVV 365
Query: 362 GLKKMGQPGKAQLILTLARKRVPP 384
GL + + A+ ++ +K+ PP
Sbjct: 366 GLVENKKRDDAKGLIRTVKKKFPP 380
BLAST of Lcy02g005660 vs. ExPASy Swiss-Prot
Match:
Q8LE47 (Pentatricopeptide repeat-containing protein At1g61870, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PPR336 PE=2 SV=2)
HSP 1 Score: 208.8 bits (530), Expect = 1.2e-52
Identity = 116/380 (30.53%), Postives = 213/380 (56.05%), Query Frame = 0
Query: 2 LSLRPIRRFCHAATVIVSTETPAAVLNQVQSSKPVEEPALVKLKAERDPEKLFHLFKANA 61
L+ P R +A+ I+S ++ + +SK + AL LK+E+DP+++ + +A +
Sbjct: 17 LNASPQIRSLSSASTILSPDSKTPL-----TSKEKSKAALSLLKSEKDPDRILEICRAAS 76
Query: 62 HNRLVIENRFAFEDTVSRLAGARRFDYIEHLLE-HQKTLPQGRREGFIIRIIMLYGKAEM 121
+R AF V LA + F + +LL+ + P + E F I+LY +A M
Sbjct: 77 LTPDCRIDRIAFSAAVENLAEKKHFSAVSNLLDGFIENRPDLKSERFAAHAIVLYAQANM 136
Query: 122 IKHAVDTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALEAFLREVPEKFNIELDIISVN 181
+ H++ F D+ + RTVKS NA+L + +D + E+P+ + IE D+ + N
Sbjct: 137 LDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYN 196
Query: 182 IVVKAFCDMGIFDRAYLLMLEMEKLGIRPDVVTYTTLISALYKDNRCEISNGLWNLMVLR 241
++K FC+ G +Y ++ EME+ GI+P+ ++ +IS Y +++ + + +M R
Sbjct: 197 RMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDR 256
Query: 242 GCLPNLASFNVRIQYLVNRRRAWEANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLEMA 301
G ++++N+RIQ L R+++ EA L++ M + G+ P+ VTY+ +I GFC E A
Sbjct: 257 GVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEA 316
Query: 302 KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHSLLKG 361
K+++ + G KP+ + Y T+I+YLC+ GDF A ++CK++M KNW P+ + SL+ G
Sbjct: 317 KKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNG 376
Query: 362 LKKMGQPGKAQLILTLARKR 381
L K + +A+ ++ +++
Sbjct: 377 LAKDSKVEEAKELIGQVKEK 391
BLAST of Lcy02g005660 vs. ExPASy Swiss-Prot
Match:
Q9LG23 (Pentatricopeptide repeat-containing protein At1g55890, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g55890 PE=1 SV=1)
HSP 1 Score: 203.4 bits (516), Expect = 4.9e-51
Identity = 114/373 (30.56%), Postives = 196/373 (52.55%), Query Frame = 0
Query: 6 PIRRFCHAATVIVSTETPAAVLNQVQSSKPVEEPALVKLKAERDPEKLFHLFKANAHNRL 65
PIRRF AATV+ P AV + P ++ + ER+P+++ FK +
Sbjct: 16 PIRRFSSAATVV---SEPTAVTAAI---SPPQKSLTSLVNGERNPKRIVEKFKKACESER 75
Query: 66 VIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEMIKHAV 125
N ++ TV RL A+R Y+E +LE QK +EGF RII LYGKA M ++A
Sbjct: 76 FRTNIAVYDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQ 135
Query: 126 DTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALEAFLREVPEKFNIELDIISVNIVVKA 185
F +M C+R+V SFNA+L ++ +E E+P K +I+ DI+S N ++KA
Sbjct: 136 KVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKA 195
Query: 186 FCDMGIFDRAYLLMLEMEKLGIRPDVVTYTTLISALYKDNRCEISNGLWNLMVLRGCLPN 245
C+ A L+ E+E G++PD+VT+ TL+ + Y + E+ +W MV + +
Sbjct: 196 LCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAID 255
Query: 246 LASFNVRIQYLVNRRRAWEANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLEMAKRVYS 305
+ ++N R+ L N ++ E L ++ G+ PD ++N +I+G G ++ A+ Y
Sbjct: 256 IRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYK 315
Query: 306 ALHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHSLLKGLKKMG 365
+ GY+P+ + ++ +C++GDF A + K+ +K + T+ L+ L K
Sbjct: 316 EIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGS 375
Query: 366 QPGKAQLILTLAR 379
+ +A+ I+ +A+
Sbjct: 376 KREEAEEIVKIAK 382
BLAST of Lcy02g005660 vs. ExPASy Swiss-Prot
Match:
Q9LK57 (Pentatricopeptide repeat-containing protein At3g13160, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g13160 PE=1 SV=1)
HSP 1 Score: 195.7 bits (496), Expect = 1.0e-48
Identity = 111/372 (29.84%), Postives = 189/372 (50.81%), Query Frame = 0
Query: 8 RRFCHAATVIVSTETPAAVLNQVQSSKPVEEPALVKL-KAERDPEKLFHLFKANAHNRLV 67
RRF A T +T +P +P+L+ L ERDP+ + FK
Sbjct: 21 RRFFSAVTAAAATPSP-------------PKPSLITLVNDERDPKFITEKFKKACQAEWF 80
Query: 68 IENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEMIKHAVD 127
+N +E TV RLA A++F+++E +LE Q P +EGF+ RII LYG+ M ++A
Sbjct: 81 RKNIAVYERTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARIINLYGRVGMFENAQK 140
Query: 128 TFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALEAFLREVPEKFNIELDIISVNIVVKAF 187
F +M C+RT SFNA+L + ++ +E +E+P K +IE D+ S N ++K
Sbjct: 141 VFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGL 200
Query: 188 CDMGIFDRAYLLMLEMEKLGIRPDVVTYTTLISALYKDNRCEISNGLWNLMVLRGCLPNL 247
C G F A L+ E+E G++PD +T+ L+ Y + E +W MV + ++
Sbjct: 201 CGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDI 260
Query: 248 ASFNVRIQYLVNRRRAWEANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLEMAKRVYSA 307
S+N R+ L ++ E L + ++ + PD T+ +IKGF G L+ A Y
Sbjct: 261 RSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKE 320
Query: 308 LHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHSLLKGLKKMGQ 367
+ +G +P ++ +++ +C++GD AY +CK+ K + + ++ L K +
Sbjct: 321 IEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSK 379
Query: 368 PGKAQLILTLAR 379
+A+ I+ LA+
Sbjct: 381 QDEAEEIVELAK 379
BLAST of Lcy02g005660 vs. ExPASy TrEMBL
Match:
A0A6J1GVU5 (pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111457895 PE=4 SV=1)
HSP 1 Score: 749.2 bits (1933), Expect = 8.9e-213
Identity = 371/399 (92.98%), Postives = 388/399 (97.24%), Query Frame = 0
Query: 1 MLSLRPIRRFCHAATVIVSTETPAAVLNQVQSSKPVEEPALVKLKAERDPEKLFHLFKAN 60
MLSLRPIRRFCHAAT+IVS+ETPAAVLN VQ+SKPVEEPAL+KLKAERDPEKLFHLFKAN
Sbjct: 1 MLSLRPIRRFCHAATIIVSSETPAAVLNHVQNSKPVEEPALIKLKAERDPEKLFHLFKAN 60
Query: 61 AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120
AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRII+LYGKAEM
Sbjct: 61 AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIVLYGKAEM 120
Query: 121 IKHAVDTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALEAFLREVPEKFNIELDIISVN 180
IKHAVDTFY+MHLYGC RTVKSFNAVLKVLMK RDLGALEAFLRE PEKFNIELDIISVN
Sbjct: 121 IKHAVDTFYNMHLYGCSRTVKSFNAVLKVLMKARDLGALEAFLREAPEKFNIELDIISVN 180
Query: 181 IVVKAFCDMGIFDRAYLLMLEMEKLGIRPDVVTYTTLISALYKDNRCEISNGLWNLMVLR 240
IVVKAFCDMGI +RAYL +LEMEK+GIRPDVVTYTTLISALYK N+CEISNGLWNLMVLR
Sbjct: 181 IVVKAFCDMGILNRAYLFILEMEKVGIRPDVVTYTTLISALYKHNQCEISNGLWNLMVLR 240
Query: 241 GCLPNLASFNVRIQYLVNRRRAWEANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLEMA 300
GCLPNLASFNVRIQYLV+RRRAW+ANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFL+MA
Sbjct: 241 GCLPNLASFNVRIQYLVDRRRAWDANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLDMA 300
Query: 301 KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHSLLKG 360
KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFN+AYTMCKDAM KNWFPNIDTIHSLLKG
Sbjct: 301 KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNMAYTMCKDAMTKNWFPNIDTIHSLLKG 360
Query: 361 LKKMGQPGKAQLILTLARKRVPPFSTAQLEALNTTLLAN 400
L KMGQPGKAQLIL+LARKRVPPFST QLEALN T++AN
Sbjct: 361 LNKMGQPGKAQLILSLARKRVPPFSTTQLEALN-TIMAN 398
BLAST of Lcy02g005660 vs. ExPASy TrEMBL
Match:
A0A6J1INV5 (pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111479183 PE=4 SV=1)
HSP 1 Score: 748.8 bits (1932), Expect = 1.2e-212
Identity = 371/396 (93.69%), Postives = 385/396 (97.22%), Query Frame = 0
Query: 1 MLSLRPIRRFCHAATVIVSTETPAAVLNQVQSSKPVEEPALVKLKAERDPEKLFHLFKAN 60
MLSLRPIRRFCHAATVIVSTET AVLN VQ+SKPVEEPAL+KLKAERDPEKLFHLFKAN
Sbjct: 1 MLSLRPIRRFCHAATVIVSTETSMAVLNHVQNSKPVEEPALIKLKAERDPEKLFHLFKAN 60
Query: 61 AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120
AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRII+LYGKAEM
Sbjct: 61 AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIVLYGKAEM 120
Query: 121 IKHAVDTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALEAFLREVPEKFNIELDIISVN 180
IKHAVDTFY+MHLYGC RTVKSFNAVLKVLMK RDLGALEAFLRE PEKFNIELDIISVN
Sbjct: 121 IKHAVDTFYNMHLYGCSRTVKSFNAVLKVLMKARDLGALEAFLREAPEKFNIELDIISVN 180
Query: 181 IVVKAFCDMGIFDRAYLLMLEMEKLGIRPDVVTYTTLISALYKDNRCEISNGLWNLMVLR 240
IVVKAFCDMGI +RAYLL+LEMEK+GIRPDVVTYTTLISALYK N+CEISNGLWNLMVLR
Sbjct: 181 IVVKAFCDMGILNRAYLLILEMEKVGIRPDVVTYTTLISALYKYNQCEISNGLWNLMVLR 240
Query: 241 GCLPNLASFNVRIQYLVNRRRAWEANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLEMA 300
GCLPNLASFNVRIQYLV+RRRAW+ANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFL+MA
Sbjct: 241 GCLPNLASFNVRIQYLVDRRRAWDANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLDMA 300
Query: 301 KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHSLLKG 360
KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFN+AYTMCKDAM KNWFPNIDTIHSLLKG
Sbjct: 301 KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNMAYTMCKDAMTKNWFPNIDTIHSLLKG 360
Query: 361 LKKMGQPGKAQLILTLARKRVPPFSTAQLEALNTTL 397
L KMGQPGKAQLIL+LARKRVPPFST QLEALNTT+
Sbjct: 361 LNKMGQPGKAQLILSLARKRVPPFSTTQLEALNTTM 396
BLAST of Lcy02g005660 vs. ExPASy TrEMBL
Match:
A0A6J1DJH5 (pentatricopeptide repeat-containing protein At1g80150, mitochondrial isoform X1 OS=Momordica charantia OX=3673 GN=LOC111021098 PE=4 SV=1)
HSP 1 Score: 744.2 bits (1920), Expect = 2.8e-211
Identity = 371/396 (93.69%), Postives = 381/396 (96.21%), Query Frame = 0
Query: 1 MLSLRPIRRFCHAATVIVSTETPAAVLNQVQSSKPVEEPALVKLKAERDPEKLFHLFKAN 60
MLSLRPIRRFC AATVIVSTETPAAV NQV +SK VEEPAL+KLKAERDPEKLFHLFKAN
Sbjct: 1 MLSLRPIRRFCRAATVIVSTETPAAVFNQVLNSKSVEEPALIKLKAERDPEKLFHLFKAN 60
Query: 61 AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120
AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM
Sbjct: 61 AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120
Query: 121 IKHAVDTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALEAFLREVPEKFNIELDIISVN 180
IKHAVDTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGA+EAFL E PEKF+IELDIISVN
Sbjct: 121 IKHAVDTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGAIEAFLSEAPEKFDIELDIISVN 180
Query: 181 IVVKAFCDMGIFDRAYLLMLEMEKLGIRPDVVTYTTLISALYKDNRCEISNGLWNLMVLR 240
IVVKAFCD+GI RAYLLMLEMEK+GIRPDVVTYTTLISA YKDN CEISNGLWNLMVLR
Sbjct: 181 IVVKAFCDIGILSRAYLLMLEMEKVGIRPDVVTYTTLISAFYKDNLCEISNGLWNLMVLR 240
Query: 241 GCLPNLASFNVRIQYLVNRRRAWEANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLEMA 300
GCLPNLASFNVRIQYLV+RRRAWEANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGF +MA
Sbjct: 241 GCLPNLASFNVRIQYLVDRRRAWEANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFFDMA 300
Query: 301 KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHSLLKG 360
KRVYSAL GSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMN+NWFPNIDTIHSL+KG
Sbjct: 301 KRVYSALQGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNRNWFPNIDTIHSLIKG 360
Query: 361 LKKMGQPGKAQLILTLARKRVPPFSTAQLEALNTTL 397
LKKMGQ GKAQLILTLARKRVPPFS QLEALNTTL
Sbjct: 361 LKKMGQLGKAQLILTLARKRVPPFSLTQLEALNTTL 396
BLAST of Lcy02g005660 vs. ExPASy TrEMBL
Match:
A0A6J1G9L8 (pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111452050 PE=4 SV=1)
HSP 1 Score: 736.1 bits (1899), Expect = 7.8e-209
Identity = 362/397 (91.18%), Postives = 382/397 (96.22%), Query Frame = 0
Query: 1 MLSLRPIRRFCHAATVIVSTETPAAVLNQVQSSKPVEEPALVKLKAERDPEKLFHLFKAN 60
M+SLRPIRRFCHA TVI STET AA+LNQVQ+SK VEEPAL+KLKAERDPEKLFHLFKAN
Sbjct: 1 MVSLRPIRRFCHAGTVIASTETSAAILNQVQNSKTVEEPALIKLKAERDPEKLFHLFKAN 60
Query: 61 AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120
AH+RLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM
Sbjct: 61 AHDRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120
Query: 121 IKHAVDTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALEAFLREVPEKFNIELDIISVN 180
IKHAVDTFYDMHLYGC RTVKSFNAVLKVLMKTRDLGALE FLRE PEKFNIELDIISVN
Sbjct: 121 IKHAVDTFYDMHLYGCHRTVKSFNAVLKVLMKTRDLGALETFLRETPEKFNIELDIISVN 180
Query: 181 IVVKAFCDMGIFDRAYLLMLEMEKLGIRPDVVTYTTLISALYKDNRCEISNGLWNLMVLR 240
IVVK FCDMGI +RAYLLMLEMEKLGIRPDVVTYTTLISA YK N+CE+SNGLWNLMVLR
Sbjct: 181 IVVKGFCDMGILNRAYLLMLEMEKLGIRPDVVTYTTLISAFYKVNQCEVSNGLWNLMVLR 240
Query: 241 GCLPNLASFNVRIQYLVNRRRAWEANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLEMA 300
GCLPNLASFNVRIQYLV+RRRAWEANKLMNVM+NIGIVPDE+TYNLV+KGFC+AGFLEMA
Sbjct: 241 GCLPNLASFNVRIQYLVDRRRAWEANKLMNVMKNIGIVPDEITYNLVMKGFCRAGFLEMA 300
Query: 301 KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHSLLKG 360
KR YSALHGSGYK NVKIYQTMIHYLCRSGDFNL+YTMCKDAMNKNWFPNIDT+HS+LK
Sbjct: 301 KRGYSALHGSGYKSNVKIYQTMIHYLCRSGDFNLSYTMCKDAMNKNWFPNIDTLHSVLKA 360
Query: 361 LKKMGQPGKAQLILTLARKRVPPFSTAQLEALNTTLL 398
LKKMGQPGKAQLILTLA KRVPPF+T+QLEAL+TTL+
Sbjct: 361 LKKMGQPGKAQLILTLATKRVPPFNTSQLEALSTTLV 397
BLAST of Lcy02g005660 vs. ExPASy TrEMBL
Match:
A0A6J1KHG3 (LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111493273 PE=4 SV=1)
HSP 1 Score: 735.7 bits (1898), Expect = 1.0e-208
Identity = 363/397 (91.44%), Postives = 382/397 (96.22%), Query Frame = 0
Query: 1 MLSLRPIRRFCHAATVIVSTETPAAVLNQVQSSKPVEEPALVKLKAERDPEKLFHLFKAN 60
M+SLRPIRRF HA TVI S ET AA+LNQVQ+SKPVEEPAL+KLKAERDPEKLFHLFKAN
Sbjct: 1 MVSLRPIRRFFHAGTVIASAETSAAILNQVQTSKPVEEPALIKLKAERDPEKLFHLFKAN 60
Query: 61 AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120
AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM
Sbjct: 61 AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120
Query: 121 IKHAVDTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALEAFLREVPEKFNIELDIISVN 180
IKHAVDTFYDMHLYGC RTVKSFNAVLK+LMKTRD+GALEAFLRE PEKFNIELDIISVN
Sbjct: 121 IKHAVDTFYDMHLYGCHRTVKSFNAVLKILMKTRDIGALEAFLRETPEKFNIELDIISVN 180
Query: 181 IVVKAFCDMGIFDRAYLLMLEMEKLGIRPDVVTYTTLISALYKDNRCEISNGLWNLMVLR 240
IVVK FCDMGI +RAYLLMLEMEKLGIRPDVVTYTTLISA YK N+CEISNGL NLMVLR
Sbjct: 181 IVVKGFCDMGILNRAYLLMLEMEKLGIRPDVVTYTTLISAFYKVNQCEISNGLRNLMVLR 240
Query: 241 GCLPNLASFNVRIQYLVNRRRAWEANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLEMA 300
GCLPNLASFNVRIQYLV+RRRAWEA KLMNVM+NIGIVPDE+TYNLV+KGFC+AGFLEMA
Sbjct: 241 GCLPNLASFNVRIQYLVDRRRAWEAKKLMNVMKNIGIVPDEITYNLVMKGFCRAGFLEMA 300
Query: 301 KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHSLLKG 360
KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNL+YTMCKDAMNKNWFPNIDT+HS+LK
Sbjct: 301 KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNLSYTMCKDAMNKNWFPNIDTLHSVLKA 360
Query: 361 LKKMGQPGKAQLILTLARKRVPPFSTAQLEALNTTLL 398
LKKMGQPGKAQLILTLA KRVPPF+T+QLEALNTTL+
Sbjct: 361 LKKMGQPGKAQLILTLATKRVPPFTTSQLEALNTTLV 397
BLAST of Lcy02g005660 vs. NCBI nr
Match:
XP_023527765.1 (pentatricopeptide repeat-containing protein At1g80150, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023527766.1 pentatricopeptide repeat-containing protein At1g80150, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023527767.1 pentatricopeptide repeat-containing protein At1g80150, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023527768.1 pentatricopeptide repeat-containing protein At1g80150, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023527769.1 pentatricopeptide repeat-containing protein At1g80150, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023527770.1 pentatricopeptide repeat-containing protein At1g80150, mitochondrial [Cucurbita pepo subsp. pepo])
HSP 1 Score: 753.1 bits (1943), Expect = 1.3e-213
Identity = 372/396 (93.94%), Postives = 386/396 (97.47%), Query Frame = 0
Query: 1 MLSLRPIRRFCHAATVIVSTETPAAVLNQVQSSKPVEEPALVKLKAERDPEKLFHLFKAN 60
MLSLRPIRRFCHAATVIVS+ETPAAVLN VQ+SKPVEEPAL+KLKAERDPEKLFHLFKAN
Sbjct: 1 MLSLRPIRRFCHAATVIVSSETPAAVLNHVQNSKPVEEPALIKLKAERDPEKLFHLFKAN 60
Query: 61 AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120
AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM
Sbjct: 61 AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120
Query: 121 IKHAVDTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALEAFLREVPEKFNIELDIISVN 180
IKHAVDTFY+MHLYGC RTVKSFNAVLKVLMK RDLGALEAFLRE PEKFNIELDIISVN
Sbjct: 121 IKHAVDTFYNMHLYGCSRTVKSFNAVLKVLMKARDLGALEAFLREAPEKFNIELDIISVN 180
Query: 181 IVVKAFCDMGIFDRAYLLMLEMEKLGIRPDVVTYTTLISALYKDNRCEISNGLWNLMVLR 240
IVVKAFCDMGI +RAYL +LEMEK+GIRPDVVTYTTLISALYK N+CEISNGLWNLMVLR
Sbjct: 181 IVVKAFCDMGILNRAYLFILEMEKVGIRPDVVTYTTLISALYKHNQCEISNGLWNLMVLR 240
Query: 241 GCLPNLASFNVRIQYLVNRRRAWEANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLEMA 300
GCLPNLASFNVRIQYLV+RRRAW+ANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFL+MA
Sbjct: 241 GCLPNLASFNVRIQYLVDRRRAWDANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLDMA 300
Query: 301 KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHSLLKG 360
KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFN+AYTMCKDAM KNWFPNIDTIHSLLKG
Sbjct: 301 KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNMAYTMCKDAMTKNWFPNIDTIHSLLKG 360
Query: 361 LKKMGQPGKAQLILTLARKRVPPFSTAQLEALNTTL 397
L KMGQPGKAQLIL+LARKRVPPFST QLEALNTT+
Sbjct: 361 LNKMGQPGKAQLILSLARKRVPPFSTTQLEALNTTM 396
BLAST of Lcy02g005660 vs. NCBI nr
Match:
KAG6581920.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 750.4 bits (1936), Expect = 8.2e-213
Identity = 370/396 (93.43%), Postives = 385/396 (97.22%), Query Frame = 0
Query: 1 MLSLRPIRRFCHAATVIVSTETPAAVLNQVQSSKPVEEPALVKLKAERDPEKLFHLFKAN 60
MLSLRP RRFCHAATVIVS+ETPAAVLN VQ+SKPVEEPAL+KLKAERDPEKLFHLFKAN
Sbjct: 1 MLSLRPFRRFCHAATVIVSSETPAAVLNHVQNSKPVEEPALIKLKAERDPEKLFHLFKAN 60
Query: 61 AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120
AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRII+LYGKAEM
Sbjct: 61 AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIVLYGKAEM 120
Query: 121 IKHAVDTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALEAFLREVPEKFNIELDIISVN 180
IKHAVDTFY+MHLYGC RTVKSFNAVLKVLMK RDLGALEAFLRE PEKFNIELDIISVN
Sbjct: 121 IKHAVDTFYNMHLYGCSRTVKSFNAVLKVLMKARDLGALEAFLREAPEKFNIELDIISVN 180
Query: 181 IVVKAFCDMGIFDRAYLLMLEMEKLGIRPDVVTYTTLISALYKDNRCEISNGLWNLMVLR 240
IVVKAFCDMGI +RAYL +LEMEK+GIRPDVVTYTTLISALYK N+CEISNGLWNLMVLR
Sbjct: 181 IVVKAFCDMGILNRAYLFILEMEKMGIRPDVVTYTTLISALYKHNQCEISNGLWNLMVLR 240
Query: 241 GCLPNLASFNVRIQYLVNRRRAWEANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLEMA 300
GCLPNLASFNVRIQYLV+RRRAW+ANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFL+MA
Sbjct: 241 GCLPNLASFNVRIQYLVDRRRAWDANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLDMA 300
Query: 301 KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHSLLKG 360
KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFN+AYTMCKDAM KNWFPNIDTIHSLLKG
Sbjct: 301 KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNMAYTMCKDAMTKNWFPNIDTIHSLLKG 360
Query: 361 LKKMGQPGKAQLILTLARKRVPPFSTAQLEALNTTL 397
L KMGQPGKAQLIL+LARKRVPPFST QLEALNTT+
Sbjct: 361 LNKMGQPGKAQLILSLARKRVPPFSTTQLEALNTTM 396
BLAST of Lcy02g005660 vs. NCBI nr
Match:
XP_022956097.1 (pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like [Cucurbita moschata] >XP_022956098.1 pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like [Cucurbita moschata] >XP_022956099.1 pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like [Cucurbita moschata] >XP_022956100.1 pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like [Cucurbita moschata])
HSP 1 Score: 749.2 bits (1933), Expect = 1.8e-212
Identity = 371/399 (92.98%), Postives = 388/399 (97.24%), Query Frame = 0
Query: 1 MLSLRPIRRFCHAATVIVSTETPAAVLNQVQSSKPVEEPALVKLKAERDPEKLFHLFKAN 60
MLSLRPIRRFCHAAT+IVS+ETPAAVLN VQ+SKPVEEPAL+KLKAERDPEKLFHLFKAN
Sbjct: 1 MLSLRPIRRFCHAATIIVSSETPAAVLNHVQNSKPVEEPALIKLKAERDPEKLFHLFKAN 60
Query: 61 AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120
AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRII+LYGKAEM
Sbjct: 61 AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIVLYGKAEM 120
Query: 121 IKHAVDTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALEAFLREVPEKFNIELDIISVN 180
IKHAVDTFY+MHLYGC RTVKSFNAVLKVLMK RDLGALEAFLRE PEKFNIELDIISVN
Sbjct: 121 IKHAVDTFYNMHLYGCSRTVKSFNAVLKVLMKARDLGALEAFLREAPEKFNIELDIISVN 180
Query: 181 IVVKAFCDMGIFDRAYLLMLEMEKLGIRPDVVTYTTLISALYKDNRCEISNGLWNLMVLR 240
IVVKAFCDMGI +RAYL +LEMEK+GIRPDVVTYTTLISALYK N+CEISNGLWNLMVLR
Sbjct: 181 IVVKAFCDMGILNRAYLFILEMEKVGIRPDVVTYTTLISALYKHNQCEISNGLWNLMVLR 240
Query: 241 GCLPNLASFNVRIQYLVNRRRAWEANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLEMA 300
GCLPNLASFNVRIQYLV+RRRAW+ANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFL+MA
Sbjct: 241 GCLPNLASFNVRIQYLVDRRRAWDANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLDMA 300
Query: 301 KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHSLLKG 360
KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFN+AYTMCKDAM KNWFPNIDTIHSLLKG
Sbjct: 301 KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNMAYTMCKDAMTKNWFPNIDTIHSLLKG 360
Query: 361 LKKMGQPGKAQLILTLARKRVPPFSTAQLEALNTTLLAN 400
L KMGQPGKAQLIL+LARKRVPPFST QLEALN T++AN
Sbjct: 361 LNKMGQPGKAQLILSLARKRVPPFSTTQLEALN-TIMAN 398
BLAST of Lcy02g005660 vs. NCBI nr
Match:
XP_022979497.1 (pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like [Cucurbita maxima] >XP_022979498.1 pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like [Cucurbita maxima] >XP_022979499.1 pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like [Cucurbita maxima] >XP_022979500.1 pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like [Cucurbita maxima] >XP_022979501.1 pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like [Cucurbita maxima] >XP_022979502.1 pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like [Cucurbita maxima])
HSP 1 Score: 748.8 bits (1932), Expect = 2.4e-212
Identity = 371/396 (93.69%), Postives = 385/396 (97.22%), Query Frame = 0
Query: 1 MLSLRPIRRFCHAATVIVSTETPAAVLNQVQSSKPVEEPALVKLKAERDPEKLFHLFKAN 60
MLSLRPIRRFCHAATVIVSTET AVLN VQ+SKPVEEPAL+KLKAERDPEKLFHLFKAN
Sbjct: 1 MLSLRPIRRFCHAATVIVSTETSMAVLNHVQNSKPVEEPALIKLKAERDPEKLFHLFKAN 60
Query: 61 AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120
AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRII+LYGKAEM
Sbjct: 61 AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIVLYGKAEM 120
Query: 121 IKHAVDTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALEAFLREVPEKFNIELDIISVN 180
IKHAVDTFY+MHLYGC RTVKSFNAVLKVLMK RDLGALEAFLRE PEKFNIELDIISVN
Sbjct: 121 IKHAVDTFYNMHLYGCSRTVKSFNAVLKVLMKARDLGALEAFLREAPEKFNIELDIISVN 180
Query: 181 IVVKAFCDMGIFDRAYLLMLEMEKLGIRPDVVTYTTLISALYKDNRCEISNGLWNLMVLR 240
IVVKAFCDMGI +RAYLL+LEMEK+GIRPDVVTYTTLISALYK N+CEISNGLWNLMVLR
Sbjct: 181 IVVKAFCDMGILNRAYLLILEMEKVGIRPDVVTYTTLISALYKYNQCEISNGLWNLMVLR 240
Query: 241 GCLPNLASFNVRIQYLVNRRRAWEANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLEMA 300
GCLPNLASFNVRIQYLV+RRRAW+ANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFL+MA
Sbjct: 241 GCLPNLASFNVRIQYLVDRRRAWDANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLDMA 300
Query: 301 KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHSLLKG 360
KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFN+AYTMCKDAM KNWFPNIDTIHSLLKG
Sbjct: 301 KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNMAYTMCKDAMTKNWFPNIDTIHSLLKG 360
Query: 361 LKKMGQPGKAQLILTLARKRVPPFSTAQLEALNTTL 397
L KMGQPGKAQLIL+LARKRVPPFST QLEALNTT+
Sbjct: 361 LNKMGQPGKAQLILSLARKRVPPFSTTQLEALNTTM 396
BLAST of Lcy02g005660 vs. NCBI nr
Match:
XP_038901360.1 (pentatricopeptide repeat-containing protein At1g80150, mitochondrial [Benincasa hispida] >XP_038901371.1 pentatricopeptide repeat-containing protein At1g80150, mitochondrial [Benincasa hispida] >XP_038901381.1 pentatricopeptide repeat-containing protein At1g80150, mitochondrial [Benincasa hispida] >XP_038901390.1 pentatricopeptide repeat-containing protein At1g80150, mitochondrial [Benincasa hispida])
HSP 1 Score: 744.6 bits (1921), Expect = 4.5e-211
Identity = 370/400 (92.50%), Postives = 386/400 (96.50%), Query Frame = 0
Query: 1 MLSLRPIRRFCHAATVIVSTETPAAVLNQVQSSKPVEEPALVKLKAERDPEKLFHLFKAN 60
MLSLRPIRRFCHAAT ST+T AAVLN VQ+SKP+EEPALVKLKAERDPEKLFHLFKAN
Sbjct: 1 MLSLRPIRRFCHAAT---STDTAAAVLNHVQNSKPLEEPALVKLKAERDPEKLFHLFKAN 60
Query: 61 AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120
AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM
Sbjct: 61 AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120
Query: 121 IKHAVDTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALEAFLREVPEKFNIELDIISVN 180
IKHA+DTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALEAFL E PEKFNIELDIISVN
Sbjct: 121 IKHALDTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALEAFLSEAPEKFNIELDIISVN 180
Query: 181 IVVKAFCDMGIFDRAYLLMLEMEKLGIRPDVVTYTTLISALYKDNRCEISNGLWNLMVLR 240
IVVKAFCD+GI +RAYLLM+EMEK+GIRPDVVTYTTLISA YKDNRCEISNGLWNLMVLR
Sbjct: 181 IVVKAFCDLGILNRAYLLMVEMEKVGIRPDVVTYTTLISAFYKDNRCEISNGLWNLMVLR 240
Query: 241 GCLPNLASFNVRIQYLVNRRRAWEANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLEMA 300
GC PN+ASFNVRIQYL++RRRAW+ANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFL+MA
Sbjct: 241 GCFPNVASFNVRIQYLIDRRRAWDANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLDMA 300
Query: 301 KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHSLLKG 360
KRVYSALHG+GYKPNVKIYQTM+HYLCRSGDFNLAYTMCKD MNKNWFPNIDTIHSLLKG
Sbjct: 301 KRVYSALHGNGYKPNVKIYQTMLHYLCRSGDFNLAYTMCKDTMNKNWFPNIDTIHSLLKG 360
Query: 361 LKKMGQPGKAQLILTLARKRVPPFSTAQLEALNTTLLANS 401
L KMGQPG+AQ ILTLARKRVPPFSTAQLEALNTT LANS
Sbjct: 361 LNKMGQPGRAQFILTLARKRVPPFSTAQLEALNTT-LANS 396
BLAST of Lcy02g005660 vs. TAIR 10
Match:
AT1G80150.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 533.9 bits (1374), Expect = 1.1e-151
Identity = 266/402 (66.17%), Postives = 321/402 (79.85%), Query Frame = 0
Query: 1 MLSLRPIRRFCH----AATVI--VSTETPAAVLNQVQSSKPVEEPALVKLKAERDPEKLF 60
MLSLR IRRFCH AAT I VSTE+ NQ+Q KP+EEPALVKLK+ERDPEKL+
Sbjct: 1 MLSLRHIRRFCHFPSSAATGIAYVSTES-----NQIQGLKPLEEPALVKLKSERDPEKLY 60
Query: 61 HLFKANAHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIML 120
+LFKANA NRLVIENRFAFEDTVSRLAGA R D+IE LLEHQKTLPQGRREGFI+RIIML
Sbjct: 61 NLFKANATNRLVIENRFAFEDTVSRLAGAGRLDFIEDLLEHQKTLPQGRREGFIVRIIML 120
Query: 121 YGKAEMIKHAVDTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALEAFLREVPEKFNIEL 180
YGKA M K A+DTF++M LYGC+R+VKSFNA L+VL DL + FL + P K+ I++
Sbjct: 121 YGKAGMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDI 180
Query: 181 DIISVNIVVKAFCDMGIFDRAYLLMLEMEKLGIRPDVVTYTTLISALYKDNRCEISNGLW 240
D +S NI +K+FC++GI D AY+ M EMEK G+ PDVVTYTTLISALYK RC I NGLW
Sbjct: 181 DAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLW 240
Query: 241 NLMVLRGCLPNLASFNVRIQYLVNRRRAWEANKLMNVMRNIGIVPDEVTYNLVIKGFCQA 300
NLMVL+GC PNL +FNVRIQ+LVNRRRAW+AN L+ +M + + PD +TYN+VIKGF A
Sbjct: 241 NLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLA 300
Query: 301 GFLEMAKRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTI 360
F +MA+RVY+A+HG GYKPN+KIYQTMIHYLC++G+F+LAYTMCKD M K W+PN+DT+
Sbjct: 301 RFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTV 360
Query: 361 HSLLKGLKKMGQPGKAQLILTLARKRVPPFSTAQLEALNTTL 397
LLKGL K GQ +A+ I+ L +RVPPF + QL +L + L
Sbjct: 361 EMLLKGLVKKGQLDQAKSIMELVHRRVPPFRSKQLLSLKSIL 397
BLAST of Lcy02g005660 vs. TAIR 10
Match:
AT4G36680.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 219.2 bits (557), Expect = 6.1e-57
Identity = 125/384 (32.55%), Postives = 212/384 (55.21%), Query Frame = 0
Query: 2 LSLRPIRRFCHAATVIVSTETPAAVLNQVQSSKPVEEPALVKLKAERDPEKLFHLF-KAN 61
+SLR +RRF AA T A ++ SK A L+ E DP+K ++ +
Sbjct: 6 ISLRLVRRFASAA---ADGTTTAPSSGKISVSK-----AKSTLRKEHDPDKALKIYANVS 65
Query: 62 AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 121
H+ + +R+A E TV RLA RRF IE L+E K P+ + E F +I YG+A M
Sbjct: 66 DHSASPVSSRYAQELTVRRLAKCRRFSDIETLIESHKNDPKIKEEPFYSTLIRSYGQASM 125
Query: 122 IKHAVDTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALEAFLREVPEKFN-IELDIISV 181
HA+ TF M YG R+ SFNA+L + +++ + E+P+++N I D IS
Sbjct: 126 FNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISY 185
Query: 182 NIVVKAFCDMGIFDRAYLLMLEMEKLGIRPDVVTYTTLISALYKDNRCEISNGLWNLMVL 241
I++K++CD G ++A +M +M+ G+ + +TT++S+LYK E+++ LWN MV
Sbjct: 186 GILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVK 245
Query: 242 RGCLPNLASFNVRIQYLVNRRRAWEANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLEM 301
+GC + A++NVRI + +L+ M ++G+ PD ++YN ++ +C+ G L+
Sbjct: 246 KGCELDNAAYNVRIM-SAQKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDE 305
Query: 302 AKRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHSLLK 361
AK+VY L G+ PN ++T+I +LC S + Y + K ++ + P+ +T+ L+
Sbjct: 306 AKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVV 365
Query: 362 GLKKMGQPGKAQLILTLARKRVPP 384
GL + + A+ ++ +K+ PP
Sbjct: 366 GLVENKKRDDAKGLIRTVKKKFPP 380
BLAST of Lcy02g005660 vs. TAIR 10
Match:
AT1G61870.1 (pentatricopeptide repeat 336 )
HSP 1 Score: 208.8 bits (530), Expect = 8.3e-54
Identity = 116/380 (30.53%), Postives = 213/380 (56.05%), Query Frame = 0
Query: 2 LSLRPIRRFCHAATVIVSTETPAAVLNQVQSSKPVEEPALVKLKAERDPEKLFHLFKANA 61
L+ P R +A+ I+S ++ + +SK + AL LK+E+DP+++ + +A +
Sbjct: 17 LNASPQIRSLSSASTILSPDSKTPL-----TSKEKSKAALSLLKSEKDPDRILEICRAAS 76
Query: 62 HNRLVIENRFAFEDTVSRLAGARRFDYIEHLLE-HQKTLPQGRREGFIIRIIMLYGKAEM 121
+R AF V LA + F + +LL+ + P + E F I+LY +A M
Sbjct: 77 LTPDCRIDRIAFSAAVENLAEKKHFSAVSNLLDGFIENRPDLKSERFAAHAIVLYAQANM 136
Query: 122 IKHAVDTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALEAFLREVPEKFNIELDIISVN 181
+ H++ F D+ + RTVKS NA+L + +D + E+P+ + IE D+ + N
Sbjct: 137 LDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYN 196
Query: 182 IVVKAFCDMGIFDRAYLLMLEMEKLGIRPDVVTYTTLISALYKDNRCEISNGLWNLMVLR 241
++K FC+ G +Y ++ EME+ GI+P+ ++ +IS Y +++ + + +M R
Sbjct: 197 RMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDR 256
Query: 242 GCLPNLASFNVRIQYLVNRRRAWEANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLEMA 301
G ++++N+RIQ L R+++ EA L++ M + G+ P+ VTY+ +I GFC E A
Sbjct: 257 GVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEA 316
Query: 302 KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHSLLKG 361
K+++ + G KP+ + Y T+I+YLC+ GDF A ++CK++M KNW P+ + SL+ G
Sbjct: 317 KKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNG 376
Query: 362 LKKMGQPGKAQLILTLARKR 381
L K + +A+ ++ +++
Sbjct: 377 LAKDSKVEEAKELIGQVKEK 391
BLAST of Lcy02g005660 vs. TAIR 10
Match:
AT1G55890.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 203.4 bits (516), Expect = 3.5e-52
Identity = 114/373 (30.56%), Postives = 196/373 (52.55%), Query Frame = 0
Query: 6 PIRRFCHAATVIVSTETPAAVLNQVQSSKPVEEPALVKLKAERDPEKLFHLFKANAHNRL 65
PIRRF AATV+ P AV + P ++ + ER+P+++ FK +
Sbjct: 16 PIRRFSSAATVV---SEPTAVTAAI---SPPQKSLTSLVNGERNPKRIVEKFKKACESER 75
Query: 66 VIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEMIKHAV 125
N ++ TV RL A+R Y+E +LE QK +EGF RII LYGKA M ++A
Sbjct: 76 FRTNIAVYDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQ 135
Query: 126 DTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALEAFLREVPEKFNIELDIISVNIVVKA 185
F +M C+R+V SFNA+L ++ +E E+P K +I+ DI+S N ++KA
Sbjct: 136 KVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKA 195
Query: 186 FCDMGIFDRAYLLMLEMEKLGIRPDVVTYTTLISALYKDNRCEISNGLWNLMVLRGCLPN 245
C+ A L+ E+E G++PD+VT+ TL+ + Y + E+ +W MV + +
Sbjct: 196 LCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAID 255
Query: 246 LASFNVRIQYLVNRRRAWEANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLEMAKRVYS 305
+ ++N R+ L N ++ E L ++ G+ PD ++N +I+G G ++ A+ Y
Sbjct: 256 IRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYK 315
Query: 306 ALHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHSLLKGLKKMG 365
+ GY+P+ + ++ +C++GDF A + K+ +K + T+ L+ L K
Sbjct: 316 EIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGS 375
Query: 366 QPGKAQLILTLAR 379
+ +A+ I+ +A+
Sbjct: 376 KREEAEEIVKIAK 382
BLAST of Lcy02g005660 vs. TAIR 10
Match:
AT3G13160.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 195.7 bits (496), Expect = 7.3e-50
Identity = 111/372 (29.84%), Postives = 189/372 (50.81%), Query Frame = 0
Query: 8 RRFCHAATVIVSTETPAAVLNQVQSSKPVEEPALVKL-KAERDPEKLFHLFKANAHNRLV 67
RRF A T +T +P +P+L+ L ERDP+ + FK
Sbjct: 21 RRFFSAVTAAAATPSP-------------PKPSLITLVNDERDPKFITEKFKKACQAEWF 80
Query: 68 IENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEMIKHAVD 127
+N +E TV RLA A++F+++E +LE Q P +EGF+ RII LYG+ M ++A
Sbjct: 81 RKNIAVYERTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARIINLYGRVGMFENAQK 140
Query: 128 TFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALEAFLREVPEKFNIELDIISVNIVVKAF 187
F +M C+RT SFNA+L + ++ +E +E+P K +IE D+ S N ++K
Sbjct: 141 VFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGL 200
Query: 188 CDMGIFDRAYLLMLEMEKLGIRPDVVTYTTLISALYKDNRCEISNGLWNLMVLRGCLPNL 247
C G F A L+ E+E G++PD +T+ L+ Y + E +W MV + ++
Sbjct: 201 CGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDI 260
Query: 248 ASFNVRIQYLVNRRRAWEANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLEMAKRVYSA 307
S+N R+ L ++ E L + ++ + PD T+ +IKGF G L+ A Y
Sbjct: 261 RSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKE 320
Query: 308 LHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHSLLKGLKKMGQ 367
+ +G +P ++ +++ +C++GD AY +CK+ K + + ++ L K +
Sbjct: 321 IEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSK 379
Query: 368 PGKAQLILTLAR 379
+A+ I+ LA+
Sbjct: 381 QDEAEEIVELAK 379
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Q8GW57 | 1.6e-150 | 66.17 | Pentatricopeptide repeat-containing protein At1g80150, mitochondrial OS=Arabidop... | [more] |
| Q9M065 | 8.6e-56 | 32.55 | Pentatricopeptide repeat-containing protein At4g36680, mitochondrial OS=Arabidop... | [more] |
| Q8LE47 | 1.2e-52 | 30.53 | Pentatricopeptide repeat-containing protein At1g61870, mitochondrial OS=Arabidop... | [more] |
| Q9LG23 | 4.9e-51 | 30.56 | Pentatricopeptide repeat-containing protein At1g55890, mitochondrial OS=Arabidop... | [more] |
| Q9LK57 | 1.0e-48 | 29.84 | Pentatricopeptide repeat-containing protein At3g13160, mitochondrial OS=Arabidop... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1GVU5 | 8.9e-213 | 92.98 | pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like OS=Cuc... | [more] |
| A0A6J1INV5 | 1.2e-212 | 93.69 | pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like OS=Cuc... | [more] |
| A0A6J1DJH5 | 2.8e-211 | 93.69 | pentatricopeptide repeat-containing protein At1g80150, mitochondrial isoform X1 ... | [more] |
| A0A6J1G9L8 | 7.8e-209 | 91.18 | pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like OS=Cuc... | [more] |
| A0A6J1KHG3 | 1.0e-208 | 91.44 | LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At1g80150, mito... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| XP_023527765.1 | 1.3e-213 | 93.94 | pentatricopeptide repeat-containing protein At1g80150, mitochondrial [Cucurbita ... | [more] |
| KAG6581920.1 | 8.2e-213 | 93.43 | Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... | [more] |
| XP_022956097.1 | 1.8e-212 | 92.98 | pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like [Cucur... | [more] |
| XP_022979497.1 | 2.4e-212 | 93.69 | pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like [Cucur... | [more] |
| XP_038901360.1 | 4.5e-211 | 92.50 | pentatricopeptide repeat-containing protein At1g80150, mitochondrial [Benincasa ... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT1G80150.1 | 1.1e-151 | 66.17 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT4G36680.1 | 6.1e-57 | 32.55 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT1G61870.1 | 8.3e-54 | 30.53 | pentatricopeptide repeat 336 | [more] |
| AT1G55890.1 | 3.5e-52 | 30.56 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT3G13160.1 | 7.3e-50 | 29.84 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
