Lcy02g005610 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy02g005610
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	ethylene-responsive transcription factor WIN1-like
Location	Chr02: 7328070 .. 7329058 (+)
RNA-Seq Expression	Lcy02g005610
Synteny	Lcy02g005610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAAACAAAAGAAATTCAGAGGAGTGAGGCAACGCCGTTGGGGCTCATGGGTCTCTGAAATTCGCCACCCTCTTCTGTATTTTCTTTTCATCCCTCTCTTCTTCCTTTTCTTCATCTCATCTTCCACATTTTCTCTCACTAAACCCTAATCTTTTGTACTTGTAGAAAGAGAAGAGTTTGGTTGGGGACGTTCGAAACGGCCGAGGACGCAGCCCGAGCCTACGACGAGGCCGCCGTTCTCATGAGTGGTCGAACTGCCAAAACCAACTTTCCAGTCACCGCTACCGTCAGGAGCGAAGCCAGAAATTTTCGTAAGCATAAGCTAAATTCTGTATAGATTAAATTATTAAAAGTACTCCTGAACTATGAGGTTGGTTTCATTTTAACTATTGAAGTTTGTTTCAAAGAAAATGACGTGTTTGTATGTGTCTTTATTTATTTATTCTTTTTCGCATATGTGTTAAAATCTATTCACATAAGCAGCAATATATATATCTTTAATTCAAGATAAATTAATGGTGCGATTGCTCCCTCCTTTCTTCTTAGCTCCATCTCTGAACTCTACCATCTCAAGTATGGTGTCGTCACCGTTATCGGAGACTCTCAACGCCAAACTTCGCAAGTGTTGCAATTCTCTACCTCGTTCCTTAACTTGCCTCCGTCTCGACACGGAGAGTTGTCGCATCGGCGTCTGGCAGAGGCGTGCAGGACATCGTCGAGTGACCGACTCGAACTGGGTGATGATGGTGAAGCTTGAGAAGAAGAACGACGACGAATTCCAAGCGACGGAGTCACCGGAAAAGGGCATGGAAGAGGTGAAATTATCAAGTACTGAAGATAGTTTAGATGATGAAGAAAAGGCTGCTTTACAAATGATTGAAGAACTCTTGAACAAGATATGAGTTACAGAGTTCTTTCAAGAATTACATGTGCTTTGTATTGTTCTGAATTATAGATTAATTCCATGTATATATCATAAATATAA

mRNA sequence

ATGGCGAAACAAAAGAAATTCAGAGGAGTGAGGCAACGCCGTTGGGGCTCATGGGTCTCTGAAATTCGCCACCCTCTTCTAAAGAGAAGAGTTTGGTTGGGGACGTTCGAAACGGCCGAGGACGCAGCCCGAGCCTACGACGAGGCCGCCGTTCTCATGAGTGGTCGAACTGCCAAAACCAACTTTCCAGTCACCGCTACCGTCAGGAGCGAAGCCAGAAATTTTCCTCCATCTCTGAACTCTACCATCTCAAGTATGGTGTCGTCACCGTTATCGGAGACTCTCAACGCCAAACTTCGCAAGTGTTGCAATTCTCTACCTCGTTCCTTAACTTGCCTCCGTCTCGACACGGAGAGTTGTCGCATCGGCGTCTGGCAGAGGCGTGCAGGACATCGTCGAGTGACCGACTCGAACTGGGTGATGATGGTGAAGCTTGAGAAGAAGAACGACGACGAATTCCAAGCGACGGAGTCACCGGAAAAGGGCATGGAAGAGGTGAAATTATCAAGTACTGAAGATAGTTTAGATGATGAAGAAAAGGCTGCTTTACAAATGATTGAAGAACTCTTGAACAAGATATGAGTTACAGAGTTCTTTCAAGAATTACATGTGCTTTGTATTGTTCTGAATTATAGATTAATTCCATGTATATATCATAAATATAA

Coding sequence (CDS)

ATGGCGAAACAAAAGAAATTCAGAGGAGTGAGGCAACGCCGTTGGGGCTCATGGGTCTCTGAAATTCGCCACCCTCTTCTAAAGAGAAGAGTTTGGTTGGGGACGTTCGAAACGGCCGAGGACGCAGCCCGAGCCTACGACGAGGCCGCCGTTCTCATGAGTGGTCGAACTGCCAAAACCAACTTTCCAGTCACCGCTACCGTCAGGAGCGAAGCCAGAAATTTTCCTCCATCTCTGAACTCTACCATCTCAAGTATGGTGTCGTCACCGTTATCGGAGACTCTCAACGCCAAACTTCGCAAGTGTTGCAATTCTCTACCTCGTTCCTTAACTTGCCTCCGTCTCGACACGGAGAGTTGTCGCATCGGCGTCTGGCAGAGGCGTGCAGGACATCGTCGAGTGACCGACTCGAACTGGGTGATGATGGTGAAGCTTGAGAAGAAGAACGACGACGAATTCCAAGCGACGGAGTCACCGGAAAAGGGCATGGAAGAGGTGAAATTATCAAGTACTGAAGATAGTTTAGATGATGAAGAAAAGGCTGCTTTACAAATGATTGAAGAACTCTTGAACAAGATATGA

Protein sequence

MAKQKKFRGVRQRRWGSWVSEIRHPLLKRRVWLGTFETAEDAARAYDEAAVLMSGRTAKTNFPVTATVRSEARNFPPSLNSTISSMVSSPLSETLNAKLRKCCNSLPRSLTCLRLDTESCRIGVWQRRAGHRRVTDSNWVMMVKLEKKNDDEFQATESPEKGMEEVKLSSTEDSLDDEEKAALQMIEELLNKI

Homology

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BLAST of Lcy02g005610 vs. ExPASy Swiss-Prot
Match: Q9XI33 (Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN=WIN1 PE=2 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 7.6e-50
Identity = 118/199 (59.30%), Postives = 142/199 (71.36%), Query Frame = 0


Query: 1   MAKQKKFRGVRQRRWGSWVSEIRHPLLKRRVWLGTFETAEDAARAYDEAAVLMSGRTAKT 60
           M + KKFRGVRQR WGSWV+EIRHPLLKRR+WLGTFETAE+AARAYDEAAVLMSGR AKT
Sbjct: 1   MVQTKKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKT 60

Query: 61  NFPVTATVRSEARNFPP--SLNSTISSMV-SSPLSETLNAKLRKCCNSLPRSLTCLRLDT 120
           NFP+      E        S +ST+SS   SS LS  L+AKLRKCC S   SLTCLRLDT
Sbjct: 61  NFPLNNNNTGETSEGKTDISASSTMSSSTSSSSLSSILSAKLRKCCKSPSPSLTCLRLDT 120

Query: 121 ESCRIGVWQRRAGHRRVTDSNWVMMVKLEKKNDDEFQATESPEKGM----EEVKL-SSTE 180
            S  IGVWQ+RAG +  +DS+WVM V+L   +  +   +++ +  +     EV++  S E
Sbjct: 121 ASSHIGVWQKRAGSK--SDSSWVMTVELGPASSSQETTSKASQDAILAPTTEVEIGGSRE 180

Query: 181 DSLDDEEKAALQMIEELLN 192
           + LD+EEK ALQMIEELLN
Sbjct: 181 EVLDEEEKVALQMIEELLN 197

[Close]

BLAST of Lcy02g005610 vs. ExPASy Swiss-Prot
Match: Q3E958 (Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana OX=3702 GN=SHN3 PE=2 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 4.8e-44
Identity = 106/191 (55.50%), Postives = 130/191 (68.06%), Query Frame = 0


Query: 1   MAKQKKFRGVRQRRWGSWVSEIRHPLLKRRVWLGTFETAEDAARAYDEAAVLMSGRTAKT 60
           M   KKFRGVRQR+WGSWVSEIRHPLLKRRVWLGTF+TAE AARAYD+AAVLM+G++AKT
Sbjct: 1   MVHSKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKT 60

Query: 61  NFPVTATVRSEARNFPPSLNSTISSMVSSPLSETLNAKLRKCCNSLPRSLTCLRLDTESC 120
           NFPV   ++S   N    +NS + S  S  LSE LNAKLRK C      LTCLRLD +S 
Sbjct: 61  NFPV---IKSNGSN-SLEINSALRSPKS--LSELLNAKLRKNCKDQTPYLTCLRLDNDSS 120

Query: 121 RIGVWQRRAGHRRVTDSNWVMMVKLEKKNDDEFQATESPEKGMEEVKLSSTEDSLDDEEK 180
            IGVWQ+RAG +  T  NWV +V+L  K          P   +E  K+    + + ++++
Sbjct: 121 HIGVWQKRAGSK--TSPNWVKLVELGDK------VNARPGGDIETNKMKVRNEDVQEDDQ 177

Query: 181 AALQMIEELLN 192
            A+QMIEELLN
Sbjct: 181 MAMQMIEELLN 177

[Close]

BLAST of Lcy02g005610 vs. ExPASy Swiss-Prot
Match: Q9LFN7 (Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana OX=3702 GN=SHN2 PE=2 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 8.2e-44
Identity = 105/193 (54.40%), Postives = 130/193 (67.36%), Query Frame = 0


Query: 1   MAKQKKFRGVRQRRWGSWVSEIRHPLLKRRVWLGTFETAEDAARAYDEAAVLMSGRTAKT 60
           M   +KFRGVRQR+WGSWVSEIRHPLLKRRVWLGTFETAE AARAYD+AA+LM+G+ AKT
Sbjct: 1   MVHSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKT 60

Query: 61  NFPVTATVRSEARNFPPSLNSTISSMVSSPLSETLNAKLRKCCNSLPRSLTCLRLDTESC 120
           NFPV  +   E  +    +NS + S  S  LSE LNAKLRK C  L  SLTCLRLDT+S 
Sbjct: 61  NFPVVKS--EEGSDHVKDVNSPLMSPKS--LSELLNAKLRKSCKDLTPSLTCLRLDTDSS 120

Query: 121 RIGVWQRRAGHRRVTDSNWVMMVKLEKKNDDEFQATESPEKGMEEVKLSSTEDS--LDDE 180
            IGVWQ+RAG +  T   WVM ++L    ++            + V+    E+   + DE
Sbjct: 121 HIGVWQKRAGSK--TSPTWVMRLELGNVVNESAVDLGLTTMNKQNVEKEEEEEEAIISDE 180

Query: 181 EKAALQMIEELLN 192
           ++ A++MIEELLN
Sbjct: 181 DQLAMEMIEELLN 187

[Close]

BLAST of Lcy02g005610 vs. ExPASy Swiss-Prot
Match: Q94AW5 (Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 GN=ERF003 PE=1 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.0e-22
Identity = 82/190 (43.16%), Postives = 102/190 (53.68%), Query Frame = 0


Query: 4   QKKFRGVRQRRWGSWVSEIRHPLLKRRVWLGTFETAEDAARAYDEAAVLMSGRTAKTNFP 63
           Q++FRGVRQR WGSWVSEIRHPLLK R+WLGTFETAEDAARAYDEAA LM G  A+TNFP
Sbjct: 5   QQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFP 64

Query: 64  VTATVRSEARNFPPSLNSTISSMVSSPLSETLNAKLRKCCNSLPRSLTCLRLDTESCRIG 123
                      + P+   T SS +   LS TL AKL KC  +  +     +  T      
Sbjct: 65  -----------YNPNAIPTSSSKL---LSATLTAKLHKCYMASLQMTKQTQTQT------ 124

Query: 124 VWQRRAGHRRVTDSNWVMMVKLEKKNDDEFQ--ATESPEKGMEEVKLSSTEDSLDDEEKA 183
             Q +    +  DS+ V        N+       TE+ E   E+   +  ++    EE  
Sbjct: 125 --QTQTARSQSADSDGV------TANESHLNRGVTETTEIKWEDGNANMQQNFRPLEEDH 166

Query: 184 ALQMIEELLN 192
             QMIEELL+
Sbjct: 185 IEQMIEELLH 166

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BLAST of Lcy02g005610 vs. ExPASy Swiss-Prot
Match: P16146 (Protein PPLZ02 OS=Lupinus polyphyllus OX=3874 GN=PPLZ02 PE=2 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.3e-20
Identity = 55/99 (55.56%), Postives = 68/99 (68.69%), Query Frame = 0


Query: 4   QKKFRGVRQRRWGSWVSEIRHPLLKRRVWLGTFETAEDAARAYDEAAVLMSGRTAKTNFP 63
           Q+++RG RQR WGSWVSEIRH +LK R+W GTFE+AEDAARAYDEAA LM G  A+TNFP
Sbjct: 5   QQRYRGFRQRHWGSWVSEIRHSILKTRIWQGTFESAEDAARAYDEAARLMCGTRARTNFP 64

Query: 64  VTATVRSEARNFPPSLNSTISSMVSSPLSETLNAKLRKC 103
                      + P+ + + SS +   LS TL AKL +C
Sbjct: 65  -----------YNPNASQSSSSKL---LSATLIAKLHRC 89

[Close]

BLAST of Lcy02g005610 vs. ExPASy TrEMBL
Match: A0A6J1DI23 (ethylene-responsive transcription factor WIN1-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111021107 PE=4 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 2.1e-66
Identity = 146/196 (74.49%), Postives = 158/196 (80.61%), Query Frame = 0


Query: 1   MAKQKKFRGVRQRRWGSWVSEIRHPLLKRRVWLGTFETAEDAARAYDEAAVLMSGRTAKT 60
           MAKQKKFRGVRQRRWGSWVSEIRHP LKRRVWLGTFETAEDAARAYDEAAVLMSGRTAKT
Sbjct: 1   MAKQKKFRGVRQRRWGSWVSEIRHPFLKRRVWLGTFETAEDAARAYDEAAVLMSGRTAKT 60

Query: 61  NFPVTATVRSEARNFPPSLNSTISSMVSSPLSETLNAKLRKCCNSLPRSLTCLRLDTESC 120
           NFP+        R   P++++TISS V  PLS  LNAKLRK C S P SLTCLRLDT SC
Sbjct: 61  NFPLAVAATDIVR--APTVDTTISSAVLPPLSSILNAKLRKFCESSPPSLTCLRLDTASC 120

Query: 121 RIGVWQRRAGHRRVTDSNWVMMVKLE-KKNDDEFQAT-ESPEK-GMEEVKLSSTEDSLDD 180
           RIGVWQR AG RRV  SNWVMMV+LE KKNDD  + T ES +K G+EE+KLS   +S DD
Sbjct: 121 RIGVWQRHAGRRRVAKSNWVMMVELEKKKNDDGLRVTMESSDKAGVEELKLSGARESSDD 180

Query: 181 EEKAALQMIEELLNKI 194
           EE+A LQMIEELLNKI
Sbjct: 181 EERATLQMIEELLNKI 194

[Close]

BLAST of Lcy02g005610 vs. ExPASy TrEMBL
Match: A0A0A0KWT0 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G004960 PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 1.2e-61
Identity = 143/199 (71.86%), Postives = 161/199 (80.90%), Query Frame = 0


Query: 1   MAK-QKKFRGVRQRRWGSWVSEIRHPLLKRRVWLGTFETAEDAARAYDEAAVLMSGRTAK 60
           MAK QKKFRGVRQRRWGSWVSEIRHPLLK+RVWLGTFETAEDAARAYDEAA+LMSGRTAK
Sbjct: 1   MAKQQKKFRGVRQRRWGSWVSEIRHPLLKKRVWLGTFETAEDAARAYDEAAILMSGRTAK 60

Query: 61  TNFPV-TATVRSEARNFPPSLNSTISSMVSSPLSETLNAKLRK-CCNSLPRSLTCLRLDT 120
           TNFP+ TA V +E+RNF P             LS  LN+KLRK  C SLP SLTCLRLDT
Sbjct: 61  TNFPLSTAVVTNESRNFAP----------FGSLSAILNSKLRKGYCKSLPPSLTCLRLDT 120

Query: 121 ESCRIGVWQRRAGHRRVTDSNWVMMVKL-EKKNDDEFQAT--ESPEKGME-EVKLSSTED 180
           +SC+IGVWQRR G  RV +SNW+MMVKL EKKNDDE++ T  E  EKG+E EV++S+   
Sbjct: 121 KSCQIGVWQRRTGRYRVVNSNWLMMVKLDEKKNDDEYRVTDHELLEKGVEDEVRVSNEAG 180

Query: 181 SLDDEEKAALQMIEELLNK 193
           SLD+EE+AALQMIEELLNK
Sbjct: 181 SLDEEERAALQMIEELLNK 189

[Close]

BLAST of Lcy02g005610 vs. ExPASy TrEMBL
Match: A0A6J1DJQ0 (ethylene-responsive transcription factor WIN1-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111021107 PE=4 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 1.1e-59
Identity = 139/196 (70.92%), Postives = 151/196 (77.04%), Query Frame = 0


Query: 1   MAKQKKFRGVRQRRWGSWVSEIRHPLLKRRVWLGTFETAEDAARAYDEAAVLMSGRTAKT 60
           MAKQKKFRGVRQRRWGSW S       KRRVWLGTFETAEDAARAYDEAAVLMSGRTAKT
Sbjct: 1   MAKQKKFRGVRQRRWGSWFSS-SSIFRKRRVWLGTFETAEDAARAYDEAAVLMSGRTAKT 60

Query: 61  NFPVTATVRSEARNFPPSLNSTISSMVSSPLSETLNAKLRKCCNSLPRSLTCLRLDTESC 120
           NFP+        R   P++++TISS V  PLS  LNAKLRK C S P SLTCLRLDT SC
Sbjct: 61  NFPLAVAATDIVR--APTVDTTISSAVLPPLSSILNAKLRKFCESSPPSLTCLRLDTASC 120

Query: 121 RIGVWQRRAGHRRVTDSNWVMMVKLE-KKNDDEFQAT-ESPEK-GMEEVKLSSTEDSLDD 180
           RIGVWQR AG RRV  SNWVMMV+LE KKNDD  + T ES +K G+EE+KLS   +S DD
Sbjct: 121 RIGVWQRHAGRRRVAKSNWVMMVELEKKKNDDGLRVTMESSDKAGVEELKLSGARESSDD 180

Query: 181 EEKAALQMIEELLNKI 194
           EE+A LQMIEELLNKI
Sbjct: 181 EERATLQMIEELLNKI 193

[Close]

BLAST of Lcy02g005610 vs. ExPASy TrEMBL
Match: A0A5A7TT91 (Ethylene-responsive transcription factor WIN1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001720 PE=4 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 2.7e-58
Identity = 145/203 (71.43%), Postives = 160/203 (78.82%), Query Frame = 0


Query: 1   MAK-QKKFRGVRQRRWGSWVSEIRHPLLKRRVWLGTFETAEDAARAYDEAAVLMSGRTAK 60
           MAK QKKFRGVRQRRWGSWVSEIRHPLLKRRVWLGTFETAEDAARAYDEAAVLMSGRTAK
Sbjct: 1   MAKQQKKFRGVRQRRWGSWVSEIRHPLLKRRVWLGTFETAEDAARAYDEAAVLMSGRTAK 60

Query: 61  TNFPV-TATVRSEARNFPPSLNSTISSMVSSPLSETLNAKLRK-CCNSLPRSLTCLRLDT 120
           TNFP+ T  VR+E+RNF     S+ SS     LS  LN+KLRK    SLP  LTCLRLDT
Sbjct: 61  TNFPLSTVMVRNESRNF-----SSFSS-----LSTILNSKLRKGYWKSLPPFLTCLRLDT 120

Query: 121 ESCRIGVWQRRAGHRRVTDSNWVMMVKL-EKKNDDEFQAT--ESPEKGME---EVKLSST 180
           E+CRIGVWQRR G  RV DSNW+MMV+L EKKNDD +Q T  E  E G+E   +V++S  
Sbjct: 121 ENCRIGVWQRRTGRYRVVDSNWLMMVELDEKKNDDGYQVTTDELLENGVEDDHQVRVSDD 180

Query: 181 -EDSLDDEEKAALQMIEELLNKI 194
              SLD+EE+AALQMIEELLNKI
Sbjct: 181 GAGSLDEEERAALQMIEELLNKI 193

[Close]

BLAST of Lcy02g005610 vs. ExPASy TrEMBL
Match: A0A1S3BYV0 (ethylene-responsive transcription factor WIN1-like OS=Cucumis melo OX=3656 GN=LOC103494890 PE=4 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 2.7e-58
Identity = 145/203 (71.43%), Postives = 160/203 (78.82%), Query Frame = 0


Query: 1   MAK-QKKFRGVRQRRWGSWVSEIRHPLLKRRVWLGTFETAEDAARAYDEAAVLMSGRTAK 60
           MAK QKKFRGVRQRRWGSWVSEIRHPLLKRRVWLGTFETAEDAARAYDEAAVLMSGRTAK
Sbjct: 1   MAKQQKKFRGVRQRRWGSWVSEIRHPLLKRRVWLGTFETAEDAARAYDEAAVLMSGRTAK 60

Query: 61  TNFPV-TATVRSEARNFPPSLNSTISSMVSSPLSETLNAKLRK-CCNSLPRSLTCLRLDT 120
           TNFP+ T  VR+E+RNF     S+ SS     LS  LN+KLRK    SLP  LTCLRLDT
Sbjct: 61  TNFPLSTVMVRNESRNF-----SSFSS-----LSTILNSKLRKGYWKSLPPFLTCLRLDT 120

Query: 121 ESCRIGVWQRRAGHRRVTDSNWVMMVKL-EKKNDDEFQAT--ESPEKGME---EVKLSST 180
           E+CRIGVWQRR G  RV DSNW+MMV+L EKKNDD +Q T  E  E G+E   +V++S  
Sbjct: 121 ENCRIGVWQRRTGRYRVVDSNWLMMVELDEKKNDDGYQVTTDELLENGVEDDHQVRVSDD 180

Query: 181 -EDSLDDEEKAALQMIEELLNKI 194
              SLD+EE+AALQMIEELLNKI
Sbjct: 181 GAGSLDEEERAALQMIEELLNKI 193

[Close]

BLAST of Lcy02g005610 vs. NCBI nr
Match: XP_022153653.1 (ethylene-responsive transcription factor WIN1-like isoform X1 [Momordica charantia])

HSP 1 Score: 261.9 bits (668), Expect = 4.3e-66
Identity = 146/196 (74.49%), Postives = 158/196 (80.61%), Query Frame = 0


Query: 1   MAKQKKFRGVRQRRWGSWVSEIRHPLLKRRVWLGTFETAEDAARAYDEAAVLMSGRTAKT 60
           MAKQKKFRGVRQRRWGSWVSEIRHP LKRRVWLGTFETAEDAARAYDEAAVLMSGRTAKT
Sbjct: 1   MAKQKKFRGVRQRRWGSWVSEIRHPFLKRRVWLGTFETAEDAARAYDEAAVLMSGRTAKT 60

Query: 61  NFPVTATVRSEARNFPPSLNSTISSMVSSPLSETLNAKLRKCCNSLPRSLTCLRLDTESC 120
           NFP+        R   P++++TISS V  PLS  LNAKLRK C S P SLTCLRLDT SC
Sbjct: 61  NFPLAVAATDIVR--APTVDTTISSAVLPPLSSILNAKLRKFCESSPPSLTCLRLDTASC 120

Query: 121 RIGVWQRRAGHRRVTDSNWVMMVKLE-KKNDDEFQAT-ESPEK-GMEEVKLSSTEDSLDD 180
           RIGVWQR AG RRV  SNWVMMV+LE KKNDD  + T ES +K G+EE+KLS   +S DD
Sbjct: 121 RIGVWQRHAGRRRVAKSNWVMMVELEKKKNDDGLRVTMESSDKAGVEELKLSGARESSDD 180

Query: 181 EEKAALQMIEELLNKI 194
           EE+A LQMIEELLNKI
Sbjct: 181 EERATLQMIEELLNKI 194

[Close]

BLAST of Lcy02g005610 vs. NCBI nr
Match: XP_038876460.1 (ethylene-responsive transcription factor WIN1-like [Benincasa hispida])

HSP 1 Score: 261.9 bits (668), Expect = 4.3e-66
Identity = 147/195 (75.38%), Postives = 160/195 (82.05%), Query Frame = 0


Query: 3   KQKKFRGVRQRRWGSWVSEIRHPLLKRRVWLGTFETAEDAARAYDEAAVLMSGRTAKTNF 62
           +Q KFRGVRQRRWGSWVSEIRHPLLKRRVWLGTFETAEDAARAYDEAA+LMSGRTAKTNF
Sbjct: 4   QQNKFRGVRQRRWGSWVSEIRHPLLKRRVWLGTFETAEDAARAYDEAAILMSGRTAKTNF 63

Query: 63  PV-TATVRSEARNFPPSLNSTISSMVSSPLSETLNAKLRKCCNSLPRSLTCLRLDTESCR 122
           PV TA VR+EARN PP           SPLS  LN KLRKC  SLP SLTCLRLDTESCR
Sbjct: 64  PVSTAMVRTEARNIPP----------FSPLSTILNTKLRKCWKSLPPSLTCLRLDTESCR 123

Query: 123 IGVWQRRAGHRRVTDSNWVMMVKLEKKNDDEFQAT-ESPEKGMEE-VKL-SSTEDSLDDE 182
           IGVWQR  GH RV DS+WVMMV+LEKKN+D F+ T ES E G+E+ V+L S   +SLD+E
Sbjct: 124 IGVWQRHVGHCRVVDSSWVMMVELEKKNNDGFRVTDESSENGVEDRVRLISDGTESLDEE 183

Query: 183 EKAALQMIEELLNKI 194
           E+AALQMIEELLNKI
Sbjct: 184 ERAALQMIEELLNKI 188

[Close]

BLAST of Lcy02g005610 vs. NCBI nr
Match: XP_004152351.1 (ethylene-responsive transcription factor WIN1 [Cucumis sativus] >KGN52887.1 hypothetical protein Csa_014569 [Cucumis sativus])

HSP 1 Score: 246.1 bits (627), Expect = 2.4e-61
Identity = 143/199 (71.86%), Postives = 161/199 (80.90%), Query Frame = 0


Query: 1   MAK-QKKFRGVRQRRWGSWVSEIRHPLLKRRVWLGTFETAEDAARAYDEAAVLMSGRTAK 60
           MAK QKKFRGVRQRRWGSWVSEIRHPLLK+RVWLGTFETAEDAARAYDEAA+LMSGRTAK
Sbjct: 1   MAKQQKKFRGVRQRRWGSWVSEIRHPLLKKRVWLGTFETAEDAARAYDEAAILMSGRTAK 60

Query: 61  TNFPV-TATVRSEARNFPPSLNSTISSMVSSPLSETLNAKLRK-CCNSLPRSLTCLRLDT 120
           TNFP+ TA V +E+RNF P             LS  LN+KLRK  C SLP SLTCLRLDT
Sbjct: 61  TNFPLSTAVVTNESRNFAP----------FGSLSAILNSKLRKGYCKSLPPSLTCLRLDT 120

Query: 121 ESCRIGVWQRRAGHRRVTDSNWVMMVKL-EKKNDDEFQAT--ESPEKGME-EVKLSSTED 180
           +SC+IGVWQRR G  RV +SNW+MMVKL EKKNDDE++ T  E  EKG+E EV++S+   
Sbjct: 121 KSCQIGVWQRRTGRYRVVNSNWLMMVKLDEKKNDDEYRVTDHELLEKGVEDEVRVSNEAG 180

Query: 181 SLDDEEKAALQMIEELLNK 193
           SLD+EE+AALQMIEELLNK
Sbjct: 181 SLDEEERAALQMIEELLNK 189

[Close]

BLAST of Lcy02g005610 vs. NCBI nr
Match: XP_022153654.1 (ethylene-responsive transcription factor WIN1-like isoform X2 [Momordica charantia])

HSP 1 Score: 239.6 bits (610), Expect = 2.3e-59
Identity = 139/196 (70.92%), Postives = 151/196 (77.04%), Query Frame = 0


Query: 1   MAKQKKFRGVRQRRWGSWVSEIRHPLLKRRVWLGTFETAEDAARAYDEAAVLMSGRTAKT 60
           MAKQKKFRGVRQRRWGSW S       KRRVWLGTFETAEDAARAYDEAAVLMSGRTAKT
Sbjct: 1   MAKQKKFRGVRQRRWGSWFSS-SSIFRKRRVWLGTFETAEDAARAYDEAAVLMSGRTAKT 60

Query: 61  NFPVTATVRSEARNFPPSLNSTISSMVSSPLSETLNAKLRKCCNSLPRSLTCLRLDTESC 120
           NFP+        R   P++++TISS V  PLS  LNAKLRK C S P SLTCLRLDT SC
Sbjct: 61  NFPLAVAATDIVR--APTVDTTISSAVLPPLSSILNAKLRKFCESSPPSLTCLRLDTASC 120

Query: 121 RIGVWQRRAGHRRVTDSNWVMMVKLE-KKNDDEFQAT-ESPEK-GMEEVKLSSTEDSLDD 180
           RIGVWQR AG RRV  SNWVMMV+LE KKNDD  + T ES +K G+EE+KLS   +S DD
Sbjct: 121 RIGVWQRHAGRRRVAKSNWVMMVELEKKKNDDGLRVTMESSDKAGVEELKLSGARESSDD 180

Query: 181 EEKAALQMIEELLNKI 194
           EE+A LQMIEELLNKI
Sbjct: 181 EERATLQMIEELLNKI 193

[Close]

BLAST of Lcy02g005610 vs. NCBI nr
Match: XP_008454492.1 (PREDICTED: ethylene-responsive transcription factor WIN1-like [Cucumis melo] >KAA0044439.1 ethylene-responsive transcription factor WIN1-like [Cucumis melo var. makuwa] >TYK29566.1 ethylene-responsive transcription factor WIN1-like [Cucumis melo var. makuwa])

HSP 1 Score: 235.0 bits (598), Expect = 5.6e-58
Identity = 145/203 (71.43%), Postives = 160/203 (78.82%), Query Frame = 0


Query: 1   MAK-QKKFRGVRQRRWGSWVSEIRHPLLKRRVWLGTFETAEDAARAYDEAAVLMSGRTAK 60
           MAK QKKFRGVRQRRWGSWVSEIRHPLLKRRVWLGTFETAEDAARAYDEAAVLMSGRTAK
Sbjct: 1   MAKQQKKFRGVRQRRWGSWVSEIRHPLLKRRVWLGTFETAEDAARAYDEAAVLMSGRTAK 60

Query: 61  TNFPV-TATVRSEARNFPPSLNSTISSMVSSPLSETLNAKLRK-CCNSLPRSLTCLRLDT 120
           TNFP+ T  VR+E+RNF     S+ SS     LS  LN+KLRK    SLP  LTCLRLDT
Sbjct: 61  TNFPLSTVMVRNESRNF-----SSFSS-----LSTILNSKLRKGYWKSLPPFLTCLRLDT 120

Query: 121 ESCRIGVWQRRAGHRRVTDSNWVMMVKL-EKKNDDEFQAT--ESPEKGME---EVKLSST 180
           E+CRIGVWQRR G  RV DSNW+MMV+L EKKNDD +Q T  E  E G+E   +V++S  
Sbjct: 121 ENCRIGVWQRRTGRYRVVDSNWLMMVELDEKKNDDGYQVTTDELLENGVEDDHQVRVSDD 180

Query: 181 -EDSLDDEEKAALQMIEELLNKI 194
              SLD+EE+AALQMIEELLNKI
Sbjct: 181 GAGSLDEEERAALQMIEELLNKI 193

[Close]

BLAST of Lcy02g005610 vs. TAIR 10
Match: AT1G15360.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 198.4 bits (503), Expect = 5.4e-51
Identity = 118/199 (59.30%), Postives = 142/199 (71.36%), Query Frame = 0


Query: 1   MAKQKKFRGVRQRRWGSWVSEIRHPLLKRRVWLGTFETAEDAARAYDEAAVLMSGRTAKT 60
           M + KKFRGVRQR WGSWV+EIRHPLLKRR+WLGTFETAE+AARAYDEAAVLMSGR AKT
Sbjct: 1   MVQTKKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKT 60

Query: 61  NFPVTATVRSEARNFPP--SLNSTISSMV-SSPLSETLNAKLRKCCNSLPRSLTCLRLDT 120
           NFP+      E        S +ST+SS   SS LS  L+AKLRKCC S   SLTCLRLDT
Sbjct: 61  NFPLNNNNTGETSEGKTDISASSTMSSSTSSSSLSSILSAKLRKCCKSPSPSLTCLRLDT 120

Query: 121 ESCRIGVWQRRAGHRRVTDSNWVMMVKLEKKNDDEFQATESPEKGM----EEVKL-SSTE 180
            S  IGVWQ+RAG +  +DS+WVM V+L   +  +   +++ +  +     EV++  S E
Sbjct: 121 ASSHIGVWQKRAGSK--SDSSWVMTVELGPASSSQETTSKASQDAILAPTTEVEIGGSRE 180

Query: 181 DSLDDEEKAALQMIEELLN 192
           + LD+EEK ALQMIEELLN
Sbjct: 181 EVLDEEEKVALQMIEELLN 197

[Close]

BLAST of Lcy02g005610 vs. TAIR 10
Match: AT5G25390.2 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 179.1 bits (453), Expect = 3.4e-45
Identity = 106/191 (55.50%), Postives = 130/191 (68.06%), Query Frame = 0


Query: 1   MAKQKKFRGVRQRRWGSWVSEIRHPLLKRRVWLGTFETAEDAARAYDEAAVLMSGRTAKT 60
           M   KKFRGVRQR+WGSWVSEIRHPLLKRRVWLGTF+TAE AARAYD+AAVLM+G++AKT
Sbjct: 1   MVHSKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKT 60

Query: 61  NFPVTATVRSEARNFPPSLNSTISSMVSSPLSETLNAKLRKCCNSLPRSLTCLRLDTESC 120
           NFPV   ++S   N    +NS + S  S  LSE LNAKLRK C      LTCLRLD +S 
Sbjct: 61  NFPV---IKSNGSN-SLEINSALRSPKS--LSELLNAKLRKNCKDQTPYLTCLRLDNDSS 120

Query: 121 RIGVWQRRAGHRRVTDSNWVMMVKLEKKNDDEFQATESPEKGMEEVKLSSTEDSLDDEEK 180
            IGVWQ+RAG +  T  NWV +V+L  K          P   +E  K+    + + ++++
Sbjct: 121 HIGVWQKRAGSK--TSPNWVKLVELGDK------VNARPGGDIETNKMKVRNEDVQEDDQ 177

Query: 181 AALQMIEELLN 192
            A+QMIEELLN
Sbjct: 181 MAMQMIEELLN 177

[Close]

BLAST of Lcy02g005610 vs. TAIR 10
Match: AT5G11190.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 178.3 bits (451), Expect = 5.8e-45
Identity = 105/193 (54.40%), Postives = 130/193 (67.36%), Query Frame = 0


Query: 1   MAKQKKFRGVRQRRWGSWVSEIRHPLLKRRVWLGTFETAEDAARAYDEAAVLMSGRTAKT 60
           M   +KFRGVRQR+WGSWVSEIRHPLLKRRVWLGTFETAE AARAYD+AA+LM+G+ AKT
Sbjct: 1   MVHSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKT 60

Query: 61  NFPVTATVRSEARNFPPSLNSTISSMVSSPLSETLNAKLRKCCNSLPRSLTCLRLDTESC 120
           NFPV  +   E  +    +NS + S  S  LSE LNAKLRK C  L  SLTCLRLDT+S 
Sbjct: 61  NFPVVKS--EEGSDHVKDVNSPLMSPKS--LSELLNAKLRKSCKDLTPSLTCLRLDTDSS 120

Query: 121 RIGVWQRRAGHRRVTDSNWVMMVKLEKKNDDEFQATESPEKGMEEVKLSSTEDS--LDDE 180
            IGVWQ+RAG +  T   WVM ++L    ++            + V+    E+   + DE
Sbjct: 121 HIGVWQKRAGSK--TSPTWVMRLELGNVVNESAVDLGLTTMNKQNVEKEEEEEEAIISDE 180

Query: 181 EKAALQMIEELLN 192
           ++ A++MIEELLN
Sbjct: 181 DQLAMEMIEELLN 187

[Close]

BLAST of Lcy02g005610 vs. TAIR 10
Match: AT5G25390.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 168.3 bits (425), Expect = 6.0e-42
Identity = 103/191 (53.93%), Postives = 127/191 (66.49%), Query Frame = 0


Query: 1   MAKQKKFRGVRQRRWGSWVSEIRHPLLKRRVWLGTFETAEDAARAYDEAAVLMSGRTAKT 60
           M   KKFRGVRQR+WGSWVSEIRHPLL   VWLGTF+TAE AARAYD+AAVLM+G++AKT
Sbjct: 1   MVHSKKFRGVRQRQWGSWVSEIRHPLL---VWLGTFDTAETAARAYDQAAVLMNGQSAKT 60

Query: 61  NFPVTATVRSEARNFPPSLNSTISSMVSSPLSETLNAKLRKCCNSLPRSLTCLRLDTESC 120
           NFPV   ++S   N    +NS + S  S  LSE LNAKLRK C      LTCLRLD +S 
Sbjct: 61  NFPV---IKSNGSN-SLEINSALRSPKS--LSELLNAKLRKNCKDQTPYLTCLRLDNDSS 120

Query: 121 RIGVWQRRAGHRRVTDSNWVMMVKLEKKNDDEFQATESPEKGMEEVKLSSTEDSLDDEEK 180
            IGVWQ+RAG +  T  NWV +V+L  K          P   +E  K+    + + ++++
Sbjct: 121 HIGVWQKRAGSK--TSPNWVKLVELGDK------VNARPGGDIETNKMKVRNEDVQEDDQ 174

Query: 181 AALQMIEELLN 192
            A+QMIEELLN
Sbjct: 181 MAMQMIEELLN 174

[Close]

BLAST of Lcy02g005610 vs. TAIR 10
Match: AT5G25190.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 108.2 bits (269), Expect = 7.4e-24
Identity = 82/190 (43.16%), Postives = 102/190 (53.68%), Query Frame = 0


Query: 4   QKKFRGVRQRRWGSWVSEIRHPLLKRRVWLGTFETAEDAARAYDEAAVLMSGRTAKTNFP 63
           Q++FRGVRQR WGSWVSEIRHPLLK R+WLGTFETAEDAARAYDEAA LM G  A+TNFP
Sbjct: 5   QQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFP 64

Query: 64  VTATVRSEARNFPPSLNSTISSMVSSPLSETLNAKLRKCCNSLPRSLTCLRLDTESCRIG 123
                      + P+   T SS +   LS TL AKL KC  +  +     +  T      
Sbjct: 65  -----------YNPNAIPTSSSKL---LSATLTAKLHKCYMASLQMTKQTQTQT------ 124

Query: 124 VWQRRAGHRRVTDSNWVMMVKLEKKNDDEFQ--ATESPEKGMEEVKLSSTEDSLDDEEKA 183
             Q +    +  DS+ V        N+       TE+ E   E+   +  ++    EE  
Sbjct: 125 --QTQTARSQSADSDGV------TANESHLNRGVTETTEIKWEDGNANMQQNFRPLEEDH 166

Query: 184 ALQMIEELLN 192
             QMIEELL+
Sbjct: 185 IEQMIEELLH 166

The following BLAST results are available for this feature:

BLAST of Lcy02g005610 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XI33	7.6e-50	59.30	Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q3E958	4.8e-44	55.50	Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana OX=3702...	[more]
Q9LFN7	8.2e-44	54.40	Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana OX=3702...	[more]
Q94AW5	1.0e-22	43.16	Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 ...	[more]
P16146	1.3e-20	55.56	Protein PPLZ02 OS=Lupinus polyphyllus OX=3874 GN=PPLZ02 PE=2 SV=1	[more]

BLAST of Lcy02g005610 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DI23	2.1e-66	74.49	ethylene-responsive transcription factor WIN1-like isoform X1 OS=Momordica chara...	[more]
A0A0A0KWT0	1.2e-61	71.86	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G004960 PE=...	[more]
A0A6J1DJQ0	1.1e-59	70.92	ethylene-responsive transcription factor WIN1-like isoform X2 OS=Momordica chara...	[more]
A0A5A7TT91	2.7e-58	71.43	Ethylene-responsive transcription factor WIN1-like OS=Cucumis melo var. makuwa O...	[more]
A0A1S3BYV0	2.7e-58	71.43	ethylene-responsive transcription factor WIN1-like OS=Cucumis melo OX=3656 GN=LO...	[more]

BLAST of Lcy02g005610 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022153653.1	4.3e-66	74.49	ethylene-responsive transcription factor WIN1-like isoform X1 [Momordica charant...	[more]
XP_038876460.1	4.3e-66	75.38	ethylene-responsive transcription factor WIN1-like [Benincasa hispida]	[more]
XP_004152351.1	2.4e-61	71.86	ethylene-responsive transcription factor WIN1 [Cucumis sativus] >KGN52887.1 hypo...	[more]
XP_022153654.1	2.3e-59	70.92	ethylene-responsive transcription factor WIN1-like isoform X2 [Momordica charant...	[more]
XP_008454492.1	5.6e-58	71.43	PREDICTED: ethylene-responsive transcription factor WIN1-like [Cucumis melo] >KA...	[more]

BLAST of Lcy02g005610 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G15360.1	5.4e-51	59.30	Integrase-type DNA-binding superfamily protein	[more]
AT5G25390.2	3.4e-45	55.50	Integrase-type DNA-binding superfamily protein	[more]
AT5G11190.1	5.8e-45	54.40	Integrase-type DNA-binding superfamily protein	[more]
AT5G25390.1	6.0e-42	53.93	Integrase-type DNA-binding superfamily protein	[more]
AT5G25190.1	7.4e-24	43.16	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 29..45 score: 71.02 coord: 7..18 score: 61.97
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 6..69 e-value: 1.2E-36 score: 137.7
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 6..50 e-value: 4.8E-12 score: 45.9
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 6..63 score: 21.693544
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 5..65 e-value: 3.87184E-33 score: 111.209
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 5..65 e-value: 1.0E-26 score: 94.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 150..177
None	No IPR available	PANTHER	PTHR31194	SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR	coord: 1..192
None	No IPR available	PANTHER	PTHR31194:SF134	ETHYLENE RESPONSE FACTOR	coord: 1..192
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 6..64

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy02g005610.1	Lcy02g005610.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity