Lcy02g005580 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy02g005580
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Unknown protein
Location	Chr02: 7287218 .. 7290501 (-)
RNA-Seq Expression	Lcy02g005580
Synteny	Lcy02g005580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGCTACACAAGATCAAAACTTTTCAACTTGCAAATATACAAATCCAAAAACCAAACATTCCCTCAATCCATATTTCATCATACAATTATGTTCCTTTCTCTTATTATTTTAGAAGATAATTACAACCCATTTCCTATAAATAATAATATTCTATGTTTCCACCATTTTCCTCCCCCTTCCTTTAATGGCTGTTGCCATTAATAATAAAAACCAGAGAAGAAGAAACCAAGGTAGAAGAAGAAAGGAAGAGGAAAAGCCGAGCCTGTCAATCCTCGAAGAGGGCATTTTCGATTTCAGGATGCACGAGAGAGGCGACCCGTGATGTTGTTCATTCAAGGTCGACCCACTTTTTTCCTCGAAACTTTCAATCTCTTTTTCCCTCAATTTTTAATGTTGATCTATCGATTTCTCAAATTTTGCTTTTGTTTCTGCCTTTTTATCCTTACACCCGTGAATCTTTTTGGCTTTCAGAAGCGGCTCTCTGATCTTTTCTTCCTGGAATCGGATTTGGTCCTTCGTGGATCCGTTTTGGCCTTCTGGGTTTGCTTTAAATACGTTGCCCTATACATGGGGTAAGTTCTTTTTTGTTGTTTTGGATTTTGAATGCGTGAGATGTTTGATTGATTTGATGGGCGTGGCATTGTTCTGTGTACGAAATGGGTTATCAGCTCTGTGTTTGGTTGCTTGCTTAGAAAATGTGGCAAAAAGGAAGGAGGGATTTAGATTGGTTACCTCGTTGATTTCACCTTAATGATTGAACTATTTCCGATGTTTTGGTATTTATTCGTTTTGTTTCTGATGATGTGTTAACCGTAGCATGGAAATCCAAAGATCCAATGGTTTAATGGATTCTCTCATTTGTAATGTACGTATGGGAAAATGTGAATAGCTATTGAATGAGCATCATAGAGAATCAGAGATATCCCTTTCATGCTAGAATGAATGCCTCTTTTCCTTTTCCTTTTCCTCCTTTTGATTTCTTTTATTGTTCACTATAGTTTTGAACCATGATGTGGCTGGTGTTCTAATGAGTTCCTTGATGAACTGTAGTTTGTAATAGAGCATTGGTTGCCTTCGAAAACCATATCAATTCTAAACGTACGACTGCAGTCGTCTATTGACTGGAGGCTTCTTGTAACGTATTTTGGAAATTGCGAGCACACCAGATATGGACAACAGTGCTAACCAGTCACAGGGAGGCGATTCATCAATTAAAACCAACCAATTACAGGGGGACTCCAGCGAAGCTAATGTTCCTACTGCATTTGTAAATAATGGCAAGCTCTTATTGCTTCTATGACTTTTTGCAATTTCACTTGATTAACTTGTTGTCATAGCATTACAGCCCAGAGCAAGGGCTCCAACTTCATTTTCTTAAATTTCAATTCTAAATCCATGTCTGAGTTGATGCCATACAACAACCAATACATAGTCTGTCATTTGTATGGACCCCAATTACAAGAAAGCGATAAAGTATATTGCAATCTTAAAGAGAAATTACAATATCAATAGCCTTGTCGGAGGACTGACTCTTTCCGAAATCCATCCATCATGGCTGATTGCTTAAAACTGTATCCAACCTCCACACTCTCTAACTTTCACTATTTATAACCTCTTCCATTTACAACCAACCCCACCCTAACAGACTACCAAACAATTACAATTATGTCACTACCCAAATTCTCAATATCACCCTATTAATACTCTAGCATCATTATTCTATCTCTTTTGTTTACAAAAGTTTACAGTTTGGGAGAGTTTCTATGTTCCACAACATTGTCATGTTATTAGGTGGTGGTTTGACAGTTTTAGTTGTAGGTCTTCTTCTCTGGAATCAAACTAGGCAGGATTGGATGCAGAACAAAAAGCCCAACCGCAAAGAACAATCGATTCGAGATCCCAAATTAAGGTAAGTTGGGCACTGTTCTTTTCTATAACCAATATTATTTATATGTTCATTAGTCCATCAGTAAAGTTTTTATTGCTACTTATAAAGCCGTGATTAGATTCTTGGCAAACCGTTTATTCCAGTCCATACTGAAAACCATTTATTAGTTGCTTCTAGATTCTCTCATTGGCAACTTTTAAATTACATCCCCTTTTTTGAGAAACATCTGTGCTACTTCTAGAAGATCTTTAATTAGATTCTGTCATTGACAACTTTTTAATTGCATCTCCTTTTTTGAGAAACATTATGCGACTTCTAGAAGATCTTTATTCGGTAGATTTTATATATTTTTTCCAAAACATTGTTACAAGTTTCTATGATGGTTTTCTTCCAATCTGGTCATGATTTCCAGAACATTGTAGCATGACGCAATCTTAAATTGGAAAGCTCTATTGTAATTCATCTTTAGTTGTTAGAAGTTTTTACTCCGCTATTTCACTTATCAATGAAATTTGTAATCTTCTAAAAAAAGGATGCAATCTTAAATGTTTGCCTGCAGTAGTTTAGAGTAAGACCATTGTGCTACAAGCTGTGCCACATGTTTGGATAAATTTTTTCAAGATTTTTTTTCCCTTGTGTTTTGTTTTCAGAAGTATTTTTAACAGCTATGATTGTATGACAGATAAAAGGTTAATGGTATCATACACATTTAAATCACCTTTCTCAAAAGAGCAACTTCATTTGTTTTGAAAAAAGGAAATTTTCGTAAAAGCAGTTCCAAACTAGTTTAGTTTCAAGCATTGACCAAAAAAAGTCTATTATGACCCTCTGCAAGCTTGCTAAGAATGATAAGAAACCAGAAAGAAAAATCTGTTATAACCCTCTGGTTTCTCTGAATTGGGAGTTAATTATTCTTGAATTTTGTTTGTTGCATCTTTGTCAGCAATCATTGTCTCTGCATGCCTAAATCCTTCTGGCTTTGCAGTTGGAATGCAACATACGACAGTTTGTTGGGAAGTAACAAGCCATTCCCACAGCCTGTACCTCTTAGTGTAAGTGTCTGCCATATGCCATATCGAGCCAATACGCTTCATTTCTGATTGATTTTTCTCATTGACATTGCCTTTTTCTCTAACCGAGTCAGTCTAATTCTGAAATCTACAGGAAATGGTTGATTTTCTTGTGGACATATGGGAGCAAGAGGGGCTATACGATTGAACATCATTTATGGAATGGAAGATATTTGAAGGTTAAGTTAGACTTTGGAAACTCTCTGAACTGCTGAATTTGAACTATTACATCAATAGGTTCAATTGCTAAGTAGGCAACTTGAGCCAATACCCAAAATGTTGCTTTCTGCAAAAGAGGAAAAGAAGGGGGGGGGGGGGGGGGAGG

mRNA sequence

AAGCTACACAAGATCAAAACTTTTCAACTTGCAAATATACAAATCCAAAAACCAAACATTCCCTCAATCCATATTTCATCATACAATTATGTTCCTTTCTCTTATTATTTTAGAAGATAATTACAACCCATTTCCTATAAATAATAATATTCTATGTTTCCACCATTTTCCTCCCCCTTCCTTTAATGGCTGTTGCCATTAATAATAAAAACCAGAGAAGAAGAAACCAAGGTAGAAGAAGAAAGGAAGAGGAAAAGCCGAGCCTGTCAATCCTCGAAGAGGGCATTTTCGATTTCAGGATGCACGAGAGAGGCGACCCGTGATGTTGTTCATTCAAGAAGCGGCTCTCTGATCTTTTCTTCCTGGAATCGGATTTGGTCCTTCGTGGATCCGTTTTGGCCTTCTGGGTTTGCTTTAAATACGTTGCCCTATACATGGGTTTGTAATAGAGCATTGGTTGCCTTCGAAAACCATATCAATTCTAAACGTACGACTGCAGTCGTCTATTGACTGGAGGCTTCTTGTAACGTATTTTGGAAATTGCGAGCACACCAGATATGGACAACAGTGCTAACCAGTCACAGGGAGGCGATTCATCAATTAAAACCAACCAATTACAGGGGGACTCCAGCGAAGCTAATGTTCCTACTGCATTTGTAAATAATGGTCTTCTTCTCTGGAATCAAACTAGGCAGGATTGGATGCAGAACAAAAAGCCCAACCGCAAAGAACAATCGATTCGAGATCCCAAATTAAGCAATCATTGTCTCTGCATGCCTAAATCCTTCTGGCTTTGCAGTTGGAATGCAACATACGACAGTTTGTTGGGAAGTAACAAGCCATTCCCACAGCCTGTACCTCTTAGTGAAATGGTTGATTTTCTTGTGGACATATGGGAGCAAGAGGGGCTATACGATTGAACATCATTTATGGAATGGAAGATATTTGAAGGTTAAGTTAGACTTTGGAAACTCTCTGAACTGCTGAATTTGAACTATTACATCAATAGGTTCAATTGCTAAGTAGGCAACTTGAGCCAATACCCAAAATGTTGCTTTCTGCAAAAGAGGAAAAGAAGGGGGGGGGGGGGGGGGAGG

Coding sequence (CDS)

ATGGACAACAGTGCTAACCAGTCACAGGGAGGCGATTCATCAATTAAAACCAACCAATTACAGGGGGACTCCAGCGAAGCTAATGTTCCTACTGCATTTGTAAATAATGGTCTTCTTCTCTGGAATCAAACTAGGCAGGATTGGATGCAGAACAAAAAGCCCAACCGCAAAGAACAATCGATTCGAGATCCCAAATTAAGCAATCATTGTCTCTGCATGCCTAAATCCTTCTGGCTTTGCAGTTGGAATGCAACATACGACAGTTTGTTGGGAAGTAACAAGCCATTCCCACAGCCTGTACCTCTTAGTGAAATGGTTGATTTTCTTGTGGACATATGGGAGCAAGAGGGGCTATACGATTGA

Protein sequence

MDNSANQSQGGDSSIKTNQLQGDSSEANVPTAFVNNGLLLWNQTRQDWMQNKKPNRKEQSIRDPKLSNHCLCMPKSFWLCSWNATYDSLLGSNKPFPQPVPLSEMVDFLVDIWEQEGLYD

Homology

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BLAST of Lcy02g005580 vs. ExPASy TrEMBL
Match: A0A6J1KDW3 (uncharacterized protein LOC111492957 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111492957 PE=4 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 2.1e-53
Identity = 103/120 (85.83%), Postives = 109/120 (90.83%), Query Frame = 0


Query: 1   MDNSANQSQGGDSSIKTNQLQGDSSEANVPTAFVNNGLLLWNQTRQDWMQNKKPNRKEQS 60
           MDNSANQS+GGDSS KT QLQ DSS+AN P AFVN+GLLLWNQ RQ W+QNKK NRKEQ 
Sbjct: 1   MDNSANQSRGGDSSFKTEQLQEDSSKANAP-AFVNHGLLLWNQNRQQWLQNKKANRKEQL 60

Query: 61  IRDPKLSNHCLCMPKSFWLCSWNATYDSLLGSNKPFPQPVPLSEMVDFLVDIWEQEGLYD 120
           IR+PKLS HCLCMPKSFWLCSWNATYDSLLGSNKPFPQP+PL EMVDFLVDIWEQEGLYD
Sbjct: 61  IREPKLSTHCLCMPKSFWLCSWNATYDSLLGSNKPFPQPIPLGEMVDFLVDIWEQEGLYD 119

[Close]

BLAST of Lcy02g005580 vs. ExPASy TrEMBL
Match: A0A6J1G9Y2 (uncharacterized protein LOC111452284 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111452284 PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 1.4e-52
Identity = 102/120 (85.00%), Postives = 108/120 (90.00%), Query Frame = 0


Query: 1   MDNSANQSQGGDSSIKTNQLQGDSSEANVPTAFVNNGLLLWNQTRQDWMQNKKPNRKEQS 60
           MDNSANQS+GGDSS KT QLQ DSS+AN P AFVN+GLLLWNQ RQ W+ NKK NRKEQ 
Sbjct: 1   MDNSANQSRGGDSSFKTEQLQEDSSKANTP-AFVNHGLLLWNQNRQQWLLNKKANRKEQL 60

Query: 61  IRDPKLSNHCLCMPKSFWLCSWNATYDSLLGSNKPFPQPVPLSEMVDFLVDIWEQEGLYD 120
           IR+PKLS HCLCMPKSFWLCSWNATYDSLLGSNKPFPQP+PL EMVDFLVDIWEQEGLYD
Sbjct: 61  IREPKLSTHCLCMPKSFWLCSWNATYDSLLGSNKPFPQPIPLGEMVDFLVDIWEQEGLYD 119

[Close]

BLAST of Lcy02g005580 vs. ExPASy TrEMBL
Match: A0A6J1DHY8 (uncharacterized protein LOC111021080 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111021080 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 3.1e-52
Identity = 100/121 (82.64%), Postives = 111/121 (91.74%), Query Frame = 0


Query: 1   MDNSANQSQGGDSSI-KTNQLQGDSSEANVPTAFVNNGLLLWNQTRQDWMQNKKPNRKEQ 60
           MDNSAN+SQG +SSI KTNQ+ GDSSEANV TAFVNNGLLLWNQTRQ W++NKKP  +E 
Sbjct: 1   MDNSANRSQGSNSSISKTNQIHGDSSEANVSTAFVNNGLLLWNQTRQHWVKNKKPCNREL 60

Query: 61  SIRDPKLSNHCLCMPKSFWLCSWNATYDSLLGSNKPFPQPVPLSEMVDFLVDIWEQEGLY 120
            +R+PKL+ HCLCMPKSFWLCSWNATYDSLLGSNKPFPQPVPL+EMVDFLVD+WEQEGLY
Sbjct: 61  FVREPKLNTHCLCMPKSFWLCSWNATYDSLLGSNKPFPQPVPLAEMVDFLVDVWEQEGLY 120

[Close]

BLAST of Lcy02g005580 vs. ExPASy TrEMBL
Match: A0A0A0KTE0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G004990 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 6.9e-52
Identity = 99/120 (82.50%), Postives = 106/120 (88.33%), Query Frame = 0


Query: 1   MDNSANQSQGGDSSIKTNQLQGDSSEANVPTAFVNNGLLLWNQTRQDWMQNKKPNRKEQS 60
           MDN ANQS GG+SSI TNQ QGDSSE+NVPTAFVN+GLLLWNQ RQ W+QN+K   K Q 
Sbjct: 1   MDNIANQSSGGNSSINTNQSQGDSSESNVPTAFVNHGLLLWNQNRQHWVQNRKSGNKRQV 60

Query: 61  IRDPKLSNHCLCMPKSFWLCSWNATYDSLLGSNKPFPQPVPLSEMVDFLVDIWEQEGLYD 120
           IR+PKL  HCLCMPKSFWLCSW+ATYDSLLGSNKPFPQPVPL EMVDFLVDIWEQEGLYD
Sbjct: 61  IREPKLHTHCLCMPKSFWLCSWSATYDSLLGSNKPFPQPVPLGEMVDFLVDIWEQEGLYD 120

[Close]

BLAST of Lcy02g005580 vs. ExPASy TrEMBL
Match: A0A1S3BY48 (uncharacterized protein LOC103494700 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494700 PE=4 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 3.4e-51
Identity = 96/120 (80.00%), Postives = 107/120 (89.17%), Query Frame = 0


Query: 1   MDNSANQSQGGDSSIKTNQLQGDSSEANVPTAFVNNGLLLWNQTRQDWMQNKKPNRKEQS 60
           MDN ANQSQGGDSSI TNQ QG+SSE+NVPT FVN+GLLLWNQ RQ W+QN+K   ++Q 
Sbjct: 1   MDNIANQSQGGDSSINTNQSQGNSSESNVPTPFVNHGLLLWNQNRQHWVQNRKSGNRKQV 60

Query: 61  IRDPKLSNHCLCMPKSFWLCSWNATYDSLLGSNKPFPQPVPLSEMVDFLVDIWEQEGLYD 120
           IR+PKL  HCLCMPKSFWLCSW+ATYDSLLG+NKPFPQP+PL EMVDFLVDIWEQEGLYD
Sbjct: 61  IREPKLHTHCLCMPKSFWLCSWSATYDSLLGNNKPFPQPIPLGEMVDFLVDIWEQEGLYD 120

[Close]

BLAST of Lcy02g005580 vs. NCBI nr
Match: XP_038899953.1 (uncharacterized protein LOC120087116 isoform X2 [Benincasa hispida])

HSP 1 Score: 221.9 bits (564), Expect = 3.0e-54
Identity = 102/120 (85.00%), Postives = 110/120 (91.67%), Query Frame = 0


Query: 1   MDNSANQSQGGDSSIKTNQLQGDSSEANVPTAFVNNGLLLWNQTRQDWMQNKKPNRKEQS 60
           MDN ANQSQGGDSSIKTN+LQGDSSE+NVPTAFVN+GLLLWNQTRQ W+QN+K   KE  
Sbjct: 1   MDNIANQSQGGDSSIKTNRLQGDSSESNVPTAFVNHGLLLWNQTRQHWVQNRKSGNKEHL 60

Query: 61  IRDPKLSNHCLCMPKSFWLCSWNATYDSLLGSNKPFPQPVPLSEMVDFLVDIWEQEGLYD 120
           IR+PKL+ HCLCMPKSFWLCSWNATYDSLLGSNKPFPQP+PL EMVDFLVD WEQEGLYD
Sbjct: 61  IREPKLNTHCLCMPKSFWLCSWNATYDSLLGSNKPFPQPIPLGEMVDFLVDAWEQEGLYD 120

[Close]

BLAST of Lcy02g005580 vs. NCBI nr
Match: XP_022998269.1 (uncharacterized protein LOC111492957 isoform X1 [Cucurbita maxima])

HSP 1 Score: 218.0 bits (554), Expect = 4.4e-53
Identity = 103/120 (85.83%), Postives = 109/120 (90.83%), Query Frame = 0


Query: 1   MDNSANQSQGGDSSIKTNQLQGDSSEANVPTAFVNNGLLLWNQTRQDWMQNKKPNRKEQS 60
           MDNSANQS+GGDSS KT QLQ DSS+AN P AFVN+GLLLWNQ RQ W+QNKK NRKEQ 
Sbjct: 1   MDNSANQSRGGDSSFKTEQLQEDSSKANAP-AFVNHGLLLWNQNRQQWLQNKKANRKEQL 60

Query: 61  IRDPKLSNHCLCMPKSFWLCSWNATYDSLLGSNKPFPQPVPLSEMVDFLVDIWEQEGLYD 120
           IR+PKLS HCLCMPKSFWLCSWNATYDSLLGSNKPFPQP+PL EMVDFLVDIWEQEGLYD
Sbjct: 61  IREPKLSTHCLCMPKSFWLCSWNATYDSLLGSNKPFPQPIPLGEMVDFLVDIWEQEGLYD 119

[Close]

BLAST of Lcy02g005580 vs. NCBI nr
Match: XP_038899929.1 (uncharacterized protein LOC120087116 isoform X1 [Benincasa hispida] >XP_038899938.1 uncharacterized protein LOC120087116 isoform X1 [Benincasa hispida] >XP_038899946.1 uncharacterized protein LOC120087116 isoform X1 [Benincasa hispida])

HSP 1 Score: 216.1 bits (549), Expect = 1.7e-52
Identity = 102/124 (82.26%), Postives = 110/124 (88.71%), Query Frame = 0


Query: 1   MDNSANQSQGGDSSIKTNQLQGDSSEANVPTAFVNN----GLLLWNQTRQDWMQNKKPNR 60
           MDN ANQSQGGDSSIKTN+LQGDSSE+NVPTAFVN+    GLLLWNQTRQ W+QN+K   
Sbjct: 1   MDNIANQSQGGDSSIKTNRLQGDSSESNVPTAFVNHVLVVGLLLWNQTRQHWVQNRKSGN 60

Query: 61  KEQSIRDPKLSNHCLCMPKSFWLCSWNATYDSLLGSNKPFPQPVPLSEMVDFLVDIWEQE 120
           KE  IR+PKL+ HCLCMPKSFWLCSWNATYDSLLGSNKPFPQP+PL EMVDFLVD WEQE
Sbjct: 61  KEHLIREPKLNTHCLCMPKSFWLCSWNATYDSLLGSNKPFPQPIPLGEMVDFLVDAWEQE 120

[Close]

BLAST of Lcy02g005580 vs. NCBI nr
Match: XP_022948687.1 (uncharacterized protein LOC111452284 isoform X1 [Cucurbita moschata])

HSP 1 Score: 215.3 bits (547), Expect = 2.9e-52
Identity = 102/120 (85.00%), Postives = 108/120 (90.00%), Query Frame = 0


Query: 1   MDNSANQSQGGDSSIKTNQLQGDSSEANVPTAFVNNGLLLWNQTRQDWMQNKKPNRKEQS 60
           MDNSANQS+GGDSS KT QLQ DSS+AN P AFVN+GLLLWNQ RQ W+ NKK NRKEQ 
Sbjct: 1   MDNSANQSRGGDSSFKTEQLQEDSSKANTP-AFVNHGLLLWNQNRQQWLLNKKANRKEQL 60

Query: 61  IRDPKLSNHCLCMPKSFWLCSWNATYDSLLGSNKPFPQPVPLSEMVDFLVDIWEQEGLYD 120
           IR+PKLS HCLCMPKSFWLCSWNATYDSLLGSNKPFPQP+PL EMVDFLVDIWEQEGLYD
Sbjct: 61  IREPKLSTHCLCMPKSFWLCSWNATYDSLLGSNKPFPQPIPLGEMVDFLVDIWEQEGLYD 119

[Close]

BLAST of Lcy02g005580 vs. NCBI nr
Match: XP_023525858.1 (uncharacterized protein LOC111789349 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 214.5 bits (545), Expect = 4.9e-52
Identity = 102/120 (85.00%), Postives = 108/120 (90.00%), Query Frame = 0


Query: 1   MDNSANQSQGGDSSIKTNQLQGDSSEANVPTAFVNNGLLLWNQTRQDWMQNKKPNRKEQS 60
           MDNSANQS+GGDSSIKT QLQ DSS+AN P AFVN+GLLLWNQ RQ W+  KK NRKEQ 
Sbjct: 1   MDNSANQSRGGDSSIKTEQLQEDSSKANTP-AFVNHGLLLWNQNRQQWLLKKKANRKEQL 60

Query: 61  IRDPKLSNHCLCMPKSFWLCSWNATYDSLLGSNKPFPQPVPLSEMVDFLVDIWEQEGLYD 120
           IR+PKLS HCLCMPKSFWLCSWNATYDSLLGSNKPFPQP+PL EMVDFLVDIWEQEGLYD
Sbjct: 61  IREPKLSTHCLCMPKSFWLCSWNATYDSLLGSNKPFPQPIPLGEMVDFLVDIWEQEGLYD 119

[Close]

BLAST of Lcy02g005580 vs. TAIR 10
Match: AT5G25360.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32342.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 115.5 bits (288), Expect = 2.9e-26
Identity = 62/120 (51.67%), Postives = 76/120 (63.33%), Query Frame = 0


Query: 1   MDNSANQSQGGDSSIKTNQLQGDSSEANVPTAFVNNGLLLWNQTRQDWMQNKKPNRKEQS 60
           MDNS  QSQ   SSI        S+  + PT FVN+GL LWNQTRQ W+ N   ++K+  
Sbjct: 65  MDNSTLQSQRSMSSISFTNNTSTSASTSNPTEFVNHGLNLWNQTRQQWLAN-GTSQKKAK 124

Query: 61  IRDPKLSNHCLCMPKSFWLCSWNATYDSLLGSNKPFPQPVPLSEMVDFLVDIWEQEGLYD 120
           +R+P +              SWNATY+SLLG NK F +P+PL EMVDFLVD+WEQEGLYD
Sbjct: 125 VREPTI--------------SWNATYESLLGMNKRFSRPIPLPEMVDFLVDVWEQEGLYD 169

[Close]

BLAST of Lcy02g005580 vs. TAIR 10
Match: AT5G25360.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32342.1). )

HSP 1 Score: 115.5 bits (288), Expect = 2.9e-26
Identity = 62/120 (51.67%), Postives = 76/120 (63.33%), Query Frame = 0


Query: 1   MDNSANQSQGGDSSIKTNQLQGDSSEANVPTAFVNNGLLLWNQTRQDWMQNKKPNRKEQS 60
           MDNS  QSQ   SSI        S+  + PT FVN+GL LWNQTRQ W+ N   ++K+  
Sbjct: 65  MDNSTLQSQRSMSSISFTNNTSTSASTSNPTEFVNHGLNLWNQTRQQWLAN-GTSQKKAK 124

Query: 61  IRDPKLSNHCLCMPKSFWLCSWNATYDSLLGSNKPFPQPVPLSEMVDFLVDIWEQEGLYD 120
           +R+P +              SWNATY+SLLG NK F +P+PL EMVDFLVD+WEQEGLYD
Sbjct: 125 VREPTI--------------SWNATYESLLGMNKRFSRPIPLPEMVDFLVDVWEQEGLYD 169

[Close]

BLAST of Lcy02g005580 vs. TAIR 10
Match: AT1G15350.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15770.2); Has 148 Blast hits to 148 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 141; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). )

HSP 1 Score: 113.6 bits (283), Expect = 1.1e-25
Identity = 65/122 (53.28%), Postives = 75/122 (61.48%), Query Frame = 0


Query: 1   MDNSANQSQGG-DSSIKTNQLQGDSSEANVPTAFVNNGLLLWNQTRQDWMQNKKPNRKEQ 60
           MDN    SQG   SS +T   Q  +  +N P  +VN GLLLWNQTR+ W+   KPN    
Sbjct: 47  MDNITFPSQGSLSSSNQTFDSQSAARNSNAPPEYVNQGLLLWNQTRERWVGKDKPNNPVD 106

Query: 61  SIRDPKLSNHCLCMPKSFWLCSWN-ATYDSLLGSNKPFPQPVPLSEMVDFLVDIWEQEGL 120
             +  KL              +WN ATYDSLLGSNK FPQP+PL+EMVDFLVDIWEQEGL
Sbjct: 107 HNQGAKL--------------NWNTATYDSLLGSNKLFPQPIPLTEMVDFLVDIWEQEGL 154

[Close]

BLAST of Lcy02g005580 vs. TAIR 10
Match: AT1G15350.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15770.2); Has 148 Blast hits to 148 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 141; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). )

HSP 1 Score: 113.6 bits (283), Expect = 1.1e-25
Identity = 65/122 (53.28%), Postives = 75/122 (61.48%), Query Frame = 0


Query: 1   MDNSANQSQGG-DSSIKTNQLQGDSSEANVPTAFVNNGLLLWNQTRQDWMQNKKPNRKEQ 60
           MDN    SQG   SS +T   Q  +  +N P  +VN GLLLWNQTR+ W+   KPN    
Sbjct: 47  MDNITFPSQGSLSSSNQTFDSQSAARNSNAPPEYVNQGLLLWNQTRERWVGKDKPNNPVD 106

Query: 61  SIRDPKLSNHCLCMPKSFWLCSWN-ATYDSLLGSNKPFPQPVPLSEMVDFLVDIWEQEGL 120
             +  KL              +WN ATYDSLLGSNK FPQP+PL+EMVDFLVDIWEQEGL
Sbjct: 107 HNQGAKL--------------NWNTATYDSLLGSNKLFPQPIPLTEMVDFLVDIWEQEGL 154

[Close]

BLAST of Lcy02g005580 vs. TAIR 10
Match: AT1G15350.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15770.2); Has 145 Blast hits to 145 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 138; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). )

HSP 1 Score: 113.6 bits (283), Expect = 1.1e-25
Identity = 65/122 (53.28%), Postives = 75/122 (61.48%), Query Frame = 0


Query: 1   MDNSANQSQGG-DSSIKTNQLQGDSSEANVPTAFVNNGLLLWNQTRQDWMQNKKPNRKEQ 60
           MDN    SQG   SS +T   Q  +  +N P  +VN GLLLWNQTR+ W+   KPN    
Sbjct: 1   MDNITFPSQGSLSSSNQTFDSQSAARNSNAPPEYVNQGLLLWNQTRERWVGKDKPNNPVD 60

Query: 61  SIRDPKLSNHCLCMPKSFWLCSWN-ATYDSLLGSNKPFPQPVPLSEMVDFLVDIWEQEGL 120
             +  KL              +WN ATYDSLLGSNK FPQP+PL+EMVDFLVDIWEQEGL
Sbjct: 61  HNQGAKL--------------NWNTATYDSLLGSNKLFPQPIPLTEMVDFLVDIWEQEGL 108

The following BLAST results are available for this feature:

BLAST of Lcy02g005580 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy02g005580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KDW3	2.1e-53	85.83	uncharacterized protein LOC111492957 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1G9Y2	1.4e-52	85.00	uncharacterized protein LOC111452284 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1DHY8	3.1e-52	82.64	uncharacterized protein LOC111021080 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A0A0KTE0	6.9e-52	82.50	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G004990 PE=4 SV=1	[more]
A0A1S3BY48	3.4e-51	80.00	uncharacterized protein LOC103494700 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of Lcy02g005580 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038899953.1	3.0e-54	85.00	uncharacterized protein LOC120087116 isoform X2 [Benincasa hispida]	[more]
XP_022998269.1	4.4e-53	85.83	uncharacterized protein LOC111492957 isoform X1 [Cucurbita maxima]	[more]
XP_038899929.1	1.7e-52	82.26	uncharacterized protein LOC120087116 isoform X1 [Benincasa hispida] >XP_03889993...	[more]
XP_022948687.1	2.9e-52	85.00	uncharacterized protein LOC111452284 isoform X1 [Cucurbita moschata]	[more]
XP_023525858.1	4.9e-52	85.00	uncharacterized protein LOC111789349 isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lcy02g005580 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G25360.1	2.9e-26	51.67	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G25360.2	2.9e-26	51.67	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G15350.2	1.1e-25	53.28	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G15350.1	1.1e-25	53.28	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G15350.3	1.1e-25	53.28	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025124	Domain of unknown function DUF4050	PFAM	PF13259	DUF4050	coord: 16..64 e-value: 1.4E-7 score: 32.0 coord: 81..120 e-value: 2.5E-14 score: 54.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..28
None	No IPR available	PANTHER	PTHR33373:SF15	DUF4050 FAMILY PROTEIN	coord: 1..120
None	No IPR available	PANTHER	PTHR33373	OS07G0479600 PROTEIN	coord: 1..120

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy02g005580.1	Lcy02g005580.1	mRNA