Lcy02g004750 (gene) Sponge gourd (P93075) v1

Overview
NameLcy02g004750
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionRNase H domain-containing protein
LocationChr02: 6173716 .. 6178302 (+)
RNA-Seq ExpressionLcy02g004750
SyntenyLcy02g004750
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTGATATGGGGTTGATGGAGCTGGATAATATAACGGATGGATTCTTAAAAAAAGAACCGGGCTCCAAAAGTCAACAATTAAAGGTAGCGGAGAATCAGGCCATGGAAGGAAAAATATCAAAAGGTAAGAAGTGGAAAAGGGTGCAGCGTTTGAGTCAGGAGGCGGCAGACATGGGAAATTTGGAAAGAATGGAAACTTCAATTCTGGAAGTCACTACCAAGGGTAAACATAAGCTTGATTTTGATGAGGAGAGTACCAACAAGAAAAGGATAGTGGTTATGGAGGAACATTCAAATGTAAGAGCGGTGGAGGCTGCAGGACAGCCCCGCCGAGTGCAATGAAAACGCTATGTTGGAATGTCCAAGGGTTGGGGAACCCTCGGACATTAAGAACGCTACGTCATTTAGTGCGCAGCCACAATCCCCAAGTAGTTTTCTTAATGGAAACTAAATGTAAGAGTCATGGGTATGAACGAATTCGACGAGAGCTTCGATTGGAATGTGGTATTGAAGTTCCAAGTAGGGGGCTGAGCGGGGGTCTTATGTTGCTTTGGCAAAGGGAGATAGATTTATCTATTCGATCCTTTTCGAAAGGACATATTGATGCTATGATTACTGACAATGGTAAATGTTGGAGGTTTACGGGCATTTATGGTAATCCTAGTAGGGAGATGCATCATGAAACATGGACCCTACTAAAGCGTCTAGGAGAGGGAGAGAACTATCCTTGGGTCGTAGGAGGTGACTTTAATGAAATAACAAGCAATGAGGAAAAATCAGGTGGATTACCTCGCTCAGAAAGTGGTATGCAAGAGTTTCGAAATTGTATGGACTTGTGTGGCCTGATGGACCCTGGATTCACAGGGCTGGAGTTTACATGGTGTAATAAGCATTTCCAATCGGACCTCATTTGTGAAAGGTTGGATAGATTCTTAATTAACCATCATATGCAGGATTCTTGTCACAGGTTCAAGGTTAGGCATTTGTCTCTCATTGCTTCTGACCATAGGCCTATATTGGCGGAATGGATGGAAGATTATGGTAGAATTAGAGGTCGGGTTTTTAAGAGAACTAGACGGTTTGAAGAATCGTGGACAAAATATGAGGAGTGCAGACAAATTATTAAGCAAGTTTGGCAACAAACGAGGCTACAATCGAGTGACTTGGTGTTAGACAAAACCGAGAAGTGTTTGATGAGTTTACAGGCTTGGAGTAGGACTAAGTATGGTGGCTCCATCCGTGGTGCAATAACTAGGAAAGAAAAGGAAATTCAGGAGTTGTTAAGCCATAATAACCTAGCAGATGAGGCACGTTTGGCTGAAAAAGAGAGGGAGCTGGAGAATCTACTGGAAGATGATGAGATATACTGGCACCAACGTTCTCGGGAGGACTGGATTAATTGGGGGGATAGGAATACCAAATGGTTCCATAGGAAAGCAAATCAGAGACGAAAAGTTAACATCATTCATGGGCTTTTAGATGAGGTAGGCAATTGGTGCTATGAGGATTCGGACTTGGATACAGTTGCCACTCAATATTTTCAGAATATTTTCCACACATCTCATCCGCATTTGGAGGATATTGAATGTATTTTGGACACAATCCCAACCAAAATCACTCCAGAGCAGAACTTGAAGCTAACCAGTAGTTTCTCAAAGGAGGAAATTTTTCAGGTGATAAAAAATATGCACCCTACTAAGGCTCCTGGACCGGATGGTATTCAAGCAGTTTTTTATCAGAAGTACTGGGATATAGTGGGTAATGAAGTCAGTAAATTCTGTTTAGAGTTTTTGAATGGTGAGCGTCAATTGGATAAAGTGAATAGGACTCATATCGTGTTAATTCCCAAAGTAAAGGATCCAAAAACTATGAAAGAGTTCCGCCCTATTAGTCTTTGCTCCGTTTTATACAAAGTAATTGCAAAGGTTCTTGCCAATCGCTTAAAATCAGTGTTGAATGAGATTATTTCTCCCAATCAATCTGCCTTTGTACCTGGGAGATTAATCACAGACAATACTATTATTGGCTTCGAATGTATCCACTCGGTTAAAGGTCGAAGAAAGGGGAAGAAGGGGGTTGTTGCTCTCAAGCTTGACATGAGTAAGGCTTATGATCGAGTGGAATGGAGTTATATTCGGAGGATCATGGAAAAGATGGGCTTTTGTGATAAGTGGGTTAAGTTGATAATGGGATGTGTGAATAAGTGAGTTTTCAAGTTCTCCTGAATGGCAGACCTCGATCGATATTCAGTCCAAAGCGGGGTCTTCGTCAGGGAGATCCCCTTTCTCCTTATTTATTCTTGATTTGTGCAGAGGGTTTATCGGGCCTTCTAAACAAAGCTGAAATAAAGAGGGAGCTGACAGGTTTGCGTATTAATAGACATTGTCCTTCTTTAACTCATTTATTTTATGCTGATGATAGTCTTTTGTTCTTTCAAGCTACTGAATCAGATTGCAGGTCCATTCATAACATCCTTCGGATATATGAAAAGGCTTCTGGACAGACAATCAACTTTGAGAAATCCAATTTTATGGTGAGCCCAAACACAAGGGAAGTTGATATAGATATCATAAAGAATTTGTTGCAGGTTCAGCACACAGAAAGCCTAGGTCAATACCTAGGGCTTCCATCTCAAAATGCTCGGAATAAACGGGAAATATTTGAGAACATTAAAGATCGTGTCTGGAAGGCGTTGCAAGGATGGAAAGGGAGGTTTTTCTCTTCTGCGGGCAAAGAAGTTCTGATTAAATCTGTGGCTCAAGCAATTCCTAATTACGCTATGAGCTGTTTTAAATTCCCTAAGTCTTTATGTAATGATTTGAATTCTTTGTGTGCTAGGTTCTGGTGGGGGTCGTCTGAGGCTGAAAGGAAGATTCACTGCGTAGCTGGAGAAAACTTTGTATCCATAAAAGGCAGGGAGGAATGGGCTTTAGGGATCTGAATATTTTCAATCAGGCCATGCTTGCAAAGCAAAGCTGGAGAATAATCCACAATCCAGGGAGTTTGATGGCTCGAATTCTTCGTGGGCGATATTTCAAAACAGGACAGTTTCTGAAGGCCTCATTGGGGAACAACCCATCTTACGTTTGGAGAAGTATTTTATGGGGGAGAGAACTCTTTAGTAGAGGGTATCGATGGAGGATTGGTAATGGAGTCAACATTGAGGCTTCCTCTGAGCCTTGGATTCCGAAAGAAGGATCTAATAAGCCTATCCTTTGTCAGCCTCATGCTCTGAATTACTCAGTTGCTCAATTTATTACTCCTCCAGGAGTTTGGAATGAGAGTCTTCTTCGATGTTCATTCCTGGAAAGTGATGTGGTGGCTATCCTGAATATACCTCTTAATCCATCTCAAAAAGAGGACTTTATTGTATGGGATTTAGATTCTAAAGGCTTCTTTTCTGTCAAGAGTGCCTATAGGTTGGGGACTAATCTCCAAAGCCAAATGGATGCATCCTCTTCAAATAGCTCCATTCAGGAATCTATGTGGAAGATTTTCTGGAAATTAAACCTCCCTGAAAAAATAAAAATATGTGGTTGGAGGATTTTCAATGATATTCTTCCTACCCTTAATAATCTGATTAGGAGAGGAGTAGAGGCTAATCCTATTTGTGTGTTTTGCAGGAAAAGTATAGAATCAGCCACACATTTGTTCTGGGAGTGTAAACAGGTGAGAGAGATCTGGAATAATTTTTGTCCGATTACTTATGAGTTCGGGTTTTGTGTCAGGAATGAGATGGTTCCAGCAGATCTTTTTGTTCGAGTCTGGAAGGAAGCTAATGGAGATGCTATAGATTCCAAAAGGATGGCCACTAGCCTAGTGATATGCTGGCAAATATGGACTCACAGGAATGAAATTACTCAAAGACAGAAGCAGTTGGACCTTCGACTTCTCAAGGATCGAATCAGCAAGTATATGTCAGAGTTTATTCTCAACAAAGACACTCACCAGCGGCATCTCCGCAGTCACTCAGCAACAGCATCCGAAAGTGCTCAGCCTCGCAACTTGCAGTCGAACGACGCCCCGCCTTTGTGGATTCCAGCTCCAATCGGCATCTACAAATTAAACTGTGATGCTACTTGGAGTCAAGCAAAACAGAGGGGAGGAATCGGTTGGATTTTGAGAGATTGGTCGGGTTTACCTCTTCGAGTAGGGATAAAATGCATCTCAAATATCTGGAAAATTAGCTGGCTGGAGGCGCTGGCCATTTGCGAAGCTCTCCGTGCTATACCCATGGATTTCCCTCCTTTGCAAATTGAATCTGATGCCTTGCAGATTGTGCGCCTTTTATCCAATGAAGATGTGGATGCAACTGAGTTAGGAAGCTTTATTTTTGAAGCTCAAACCCTTATGTCTTCTCTCAAGATAGAGAATATTCAACATACTTCAAGGACCAATAATGGTTTGGCCCATTTTCTGGCCCACAAAGCTTGTGAGCTAAAGGTGTCAGTGACTTGGGTTAATGCCTTTCCTAAGTGGCTGTTAGATTTTAATGAGGTAGATTGTGGTCATGTTACTCATGCTTGTGGGGGTCCCTGTCTCACAGGTAGTACTCGTTTGGGAGCTAATCTAGCTCGGTTTTAA

mRNA sequence

ATGAGTGATATGGGGTTGATGGAGCTGGATAATATAACGGATGGATTCTTAAAAAAAGAACCGGGCTCCAAAAGTCAACAATTAAAGGTAGCGGAGAATCAGGCCATGGAAGGAAAAATATCAAAAGGTAAGAAGTGGAAAAGGGTGCAGCGTTTGAGTCAGGAGGCGGCAGACATGGGAAATTTGGAAAGAATGGAAACTTCAATTCTGGAAGTCACTACCAAGGATCTTTTTGTTCGAGTCTGGAAGGAAGCTAATGGAGATGCTATAGATTCCAAAAGGATGGCCACTAGCCTAGTGATATGCTGGCAAATATGGACTCACAGGAATGAAATTACTCAAAGACAGAAGCAGTTGGACCTTCGACTTCTCAAGGATCGAATCAGCAAGTATATGTCAGAGTTTATTCTCAACAAAGACACTCACCAGCGGCATCTCCGCAGTCACTCAGCAACAGCATCCGAAAGTGCTCAGCCTCGCAACTTGCAGTCGAACGACGCCCCGCCTTTGTGGATTCCAGCTCCAATCGGCATCTACAAATTAAACTGTGATGCTACTTGGAGTCAAGCAAAACAGAGGGGAGGAATCGGTTGGATTTTGAGAGATTGGTCGGGTAGTACTCGTTTGGGAGCTAATCTAGCTCGGTTTTAA

Coding sequence (CDS)

ATGAGTGATATGGGGTTGATGGAGCTGGATAATATAACGGATGGATTCTTAAAAAAAGAACCGGGCTCCAAAAGTCAACAATTAAAGGTAGCGGAGAATCAGGCCATGGAAGGAAAAATATCAAAAGGTAAGAAGTGGAAAAGGGTGCAGCGTTTGAGTCAGGAGGCGGCAGACATGGGAAATTTGGAAAGAATGGAAACTTCAATTCTGGAAGTCACTACCAAGGATCTTTTTGTTCGAGTCTGGAAGGAAGCTAATGGAGATGCTATAGATTCCAAAAGGATGGCCACTAGCCTAGTGATATGCTGGCAAATATGGACTCACAGGAATGAAATTACTCAAAGACAGAAGCAGTTGGACCTTCGACTTCTCAAGGATCGAATCAGCAAGTATATGTCAGAGTTTATTCTCAACAAAGACACTCACCAGCGGCATCTCCGCAGTCACTCAGCAACAGCATCCGAAAGTGCTCAGCCTCGCAACTTGCAGTCGAACGACGCCCCGCCTTTGTGGATTCCAGCTCCAATCGGCATCTACAAATTAAACTGTGATGCTACTTGGAGTCAAGCAAAACAGAGGGGAGGAATCGGTTGGATTTTGAGAGATTGGTCGGGTAGTACTCGTTTGGGAGCTAATCTAGCTCGGTTTTAA

Protein sequence

MSDMGLMELDNITDGFLKKEPGSKSQQLKVAENQAMEGKISKGKKWKRVQRLSQEAADMGNLERMETSILEVTTKDLFVRVWKEANGDAIDSKRMATSLVICWQIWTHRNEITQRQKQLDLRLLKDRISKYMSEFILNKDTHQRHLRSHSATASESAQPRNLQSNDAPPLWIPAPIGIYKLNCDATWSQAKQRGGIGWILRDWSGSTRLGANLARF
Homology
[Close]
BLAST of Lcy02g004750 vs. ExPASy TrEMBL
Match: A0A6J1DNV9 (uncharacterized protein LOC111022403 OS=Momordica charantia OX=3673 GN=LOC111022403 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 6.4e-08
Identity = 37/125 (29.60%), Postives = 58/125 (46.40%), Query Frame = 0 

Query: 88  DAIDSKRMATSLVICWQIWTHRNEITQRQKQLDLRLLKDRISKYMSEFILNKDTHQRHLR 147
           D    + +   L+  W IW HRN +  R +      +  +++K+++E             
Sbjct: 3   DKASDEDLDVLLIGSWVIWNHRNYVIFRGEHSSFSTMIQQLTKFVTE------------S 62

Query: 148 SHSATASESAQPRNLQSNDAPPLWIPAPIGIYKLNCDATWSQAKQRGGIGWILRDWSGST 207
           S+ +  S S   + L +      W P P+ I+ LN DA+WS +  RGGIGWI+R W G  
Sbjct: 63  SYQSETSLSMLHKTLNNK---LKWEPPPMHIWTLNADASWSDSTHRGGIGWIIRSWDGDI 112

Query: 208 RLGAN 213
            L  N
Sbjct: 123 VLAGN 112

[Close]
BLAST of Lcy02g004750 vs. ExPASy TrEMBL
Match: A0A6J1CQG0 (uncharacterized protein LOC111013216 OS=Momordica charantia OX=3673 GN=LOC111013216 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 3.2e-07
Identity = 40/124 (32.26%), Postives = 62/124 (50.00%), Query Frame = 0 

Query: 90  IDSKRMATSLVICWQIWTHRNEITQRQKQLDLRLLKDRISKYMSEFILNKDTHQRHLRSH 149
           +  + +ATS+VI WQIW  RN    R + +D + L   I  +++    N D      ++ 
Sbjct: 26  LSDEEVATSMVIAWQIWESRNRSIFRGETIDEQQLDRSIVLFINS---NIDKGTCISQTR 85

Query: 150 SATASESAQPRNLQS-NDAPPLWIPAPIGIYKLNCDATWSQAKQRGGIGWILRDWSGSTR 209
            +  ++   PR  ++ N     W   P   +KLN DA+WS+ ++ GGIGWIL D  G   
Sbjct: 86  RSQQNDGYLPRGRENLNMLGVRWSAPPTNCWKLNTDASWSEEREVGGIGWILCDCRGEIV 145

Query: 210 LGAN 213
           L  N
Sbjct: 146 LAGN 146

[Close]
BLAST of Lcy02g004750 vs. ExPASy TrEMBL
Match: A0A803QSM7 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 2.1e-06
Identity = 39/107 (36.45%), Postives = 51/107 (47.66%), Query Frame = 0 

Query: 99  LVICWQIWTHRNEITQRQKQLDLRLLKDRISKYMSEFILNKDTHQRHLRSHSATASESAQ 158
           + I W +WT RN+     K   + LL  + + Y+ EF      H   L   S   +  AQ
Sbjct: 17  ICILWSLWTKRNKECHGTKPHPVELLLFKSNSYLEEF------HAARLVKPSHQQNSMAQ 76

Query: 159 PRNLQSNDAPPLWIPAPIGIYKLNCDATWSQAKQRGGIGWILRDWSG 206
           P  +     PP W+ AP G  KLN DA   +AKQ  G G ILR+ SG
Sbjct: 77  PPVVSPIQPPPKWLNAPSGRLKLNTDAALDKAKQISGFGAILRNSSG 117

[Close]
BLAST of Lcy02g004750 vs. ExPASy TrEMBL
Match: A0A6D2KWQ7 (Reverse transcriptase domain-containing protein OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS44139 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 3.5e-06
Identity = 37/114 (32.46%), Postives = 52/114 (45.61%), Query Frame = 0 

Query: 101 ICWQIWTHRNEITQRQKQLDLRLLKDRISKYMSEFILNKDTHQRHLRSHSATASESAQPR 160
           + W IW +RN      K LD R +  +I + M  + L ++  +R   S S T  + A+  
Sbjct: 698 VLWFIWKNRNFFLFENKSLDTRTIMGKIIEEMELWFLAQEVEERDEGSRSETVVKVAKN- 757

Query: 161 NLQSNDAPPLWIPAPIGIYKLNCDATWSQAKQRGGIGWILRDWSGSTRLGANLA 215
                     W P PI   K N    WS+AKQ GG+ W+LRD  G   L +  A
Sbjct: 758 ----------WRPPPIPWLKCNVAGVWSEAKQLGGMAWVLRDEEGKVLLHSRSA 800

[Close]
BLAST of Lcy02g004750 vs. ExPASy TrEMBL
Match: A0A6J5YDN0 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS50956 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 6.0e-06
Identity = 36/102 (35.29%), Postives = 48/102 (47.06%), Query Frame = 0 

Query: 103 WQIWTHRNEITQRQKQLDLRLLKDRISKYMSEFILNKDTHQRHLRSHSATASESAQPRNL 162
           W+IW  RN       Q D       + K +SEF                TA +  QP+ L
Sbjct: 296 WRIWKARNLAVFDGVQADPTEAVLLLLKQVSEF---------------RTAKQDLQPQPL 355

Query: 163 Q--SNDAPPLWIPAPIGIYKLNCDATWSQAKQRGGIGWILRD 203
           Q  S+ AP  W   P G+ K+NCDA WS  +  GG+GW++RD
Sbjct: 356 QPVSSPAPLSWCKPPPGLLKVNCDAAWSAQRMGGGVGWVIRD 382

[Close]
BLAST of Lcy02g004750 vs. NCBI nr
Match: XP_022155262.1 (uncharacterized protein LOC111022403 [Momordica charantia])

HSP 1 Score: 67.8 bits (164), Expect = 1.3e-07
Identity = 37/125 (29.60%), Postives = 58/125 (46.40%), Query Frame = 0 

Query: 88  DAIDSKRMATSLVICWQIWTHRNEITQRQKQLDLRLLKDRISKYMSEFILNKDTHQRHLR 147
           D    + +   L+  W IW HRN +  R +      +  +++K+++E             
Sbjct: 3   DKASDEDLDVLLIGSWVIWNHRNYVIFRGEHSSFSTMIQQLTKFVTE------------S 62

Query: 148 SHSATASESAQPRNLQSNDAPPLWIPAPIGIYKLNCDATWSQAKQRGGIGWILRDWSGST 207
           S+ +  S S   + L +      W P P+ I+ LN DA+WS +  RGGIGWI+R W G  
Sbjct: 63  SYQSETSLSMLHKTLNNK---LKWEPPPMHIWTLNADASWSDSTHRGGIGWIIRSWDGDI 112

Query: 208 RLGAN 213
            L  N
Sbjct: 123 VLAGN 112

[Close]
BLAST of Lcy02g004750 vs. NCBI nr
Match: XP_022143317.1 (uncharacterized protein LOC111013216 [Momordica charantia])

HSP 1 Score: 65.5 bits (158), Expect = 6.6e-07
Identity = 40/124 (32.26%), Postives = 62/124 (50.00%), Query Frame = 0 

Query: 90  IDSKRMATSLVICWQIWTHRNEITQRQKQLDLRLLKDRISKYMSEFILNKDTHQRHLRSH 149
           +  + +ATS+VI WQIW  RN    R + +D + L   I  +++    N D      ++ 
Sbjct: 26  LSDEEVATSMVIAWQIWESRNRSIFRGETIDEQQLDRSIVLFINS---NIDKGTCISQTR 85

Query: 150 SATASESAQPRNLQS-NDAPPLWIPAPIGIYKLNCDATWSQAKQRGGIGWILRDWSGSTR 209
            +  ++   PR  ++ N     W   P   +KLN DA+WS+ ++ GGIGWIL D  G   
Sbjct: 86  RSQQNDGYLPRGRENLNMLGVRWSAPPTNCWKLNTDASWSEEREVGGIGWILCDCRGEIV 145

Query: 210 LGAN 213
           L  N
Sbjct: 146 LAGN 146

[Close]
BLAST of Lcy02g004750 vs. NCBI nr
Match: XP_030485564.1 (uncharacterized protein LOC115702254 [Cannabis sativa])

HSP 1 Score: 62.8 bits (151), Expect = 4.3e-06
Identity = 39/107 (36.45%), Postives = 51/107 (47.66%), Query Frame = 0 

Query: 99  LVICWQIWTHRNEITQRQKQLDLRLLKDRISKYMSEFILNKDTHQRHLRSHSATASESAQ 158
           + I W +WT RN+     K   + LL  + + Y+ EF      H   L   S   +  AQ
Sbjct: 123 ICILWSLWTKRNKECHGTKPHPVELLLFKSNSYLEEF------HAARLVKPSHQQNSMAQ 182

Query: 159 PRNLQSNDAPPLWIPAPIGIYKLNCDATWSQAKQRGGIGWILRDWSG 206
           P  +     PP W+ AP G  KLN DA   +AKQ  G G ILR+ SG
Sbjct: 183 PPVVSPIQPPPKWLNAPSGRLKLNTDAALDKAKQISGFGAILRNSSG 223

[Close]
BLAST of Lcy02g004750 vs. NCBI nr
Match: CAA7056903.1 (unnamed protein product [Microthlaspi erraticum])

HSP 1 Score: 62.0 bits (149), Expect = 7.3e-06
Identity = 37/114 (32.46%), Postives = 52/114 (45.61%), Query Frame = 0 

Query: 101 ICWQIWTHRNEITQRQKQLDLRLLKDRISKYMSEFILNKDTHQRHLRSHSATASESAQPR 160
           + W IW +RN      K LD R +  +I + M  + L ++  +R   S S T  + A+  
Sbjct: 698 VLWFIWKNRNFFLFENKSLDTRTIMGKIIEEMELWFLAQEVEERDEGSRSETVVKVAKN- 757

Query: 161 NLQSNDAPPLWIPAPIGIYKLNCDATWSQAKQRGGIGWILRDWSGSTRLGANLA 215
                     W P PI   K N    WS+AKQ GG+ W+LRD  G   L +  A
Sbjct: 758 ----------WRPPPIPWLKCNVAGVWSEAKQLGGMAWVLRDEEGKVLLHSRSA 800

[Close]
BLAST of Lcy02g004750 vs. NCBI nr
Match: KAG5532236.1 (hypothetical protein RHGRI_026761 [Rhododendron griersonianum])

HSP 1 Score: 61.6 bits (148), Expect = 9.5e-06
Identity = 37/128 (28.91%), Postives = 60/128 (46.88%), Query Frame = 0 

Query: 79  VRVWKEANGDAIDSKRMATSLVICWQIWTHRNEITQRQKQLDLRLLKDRISKYMSEFILN 138
           +R+ +E +   +++     ++ +CW IW  RNE+     +    ++  R      EF+  
Sbjct: 103 MRIKEEIDKGNLETDYFPKAVFLCWFIWNARNELVFHSSKQPPHVIVARALGAWDEFVSA 162

Query: 139 KDTHQRHLRSHSATASESAQPRNLQSNDAPPLWIPAPIGIYKLNCDATWSQAKQRGGIGW 198
            +T   HL            PR+L  + +   WIP   G  K+NCDA+WS+   RG  G 
Sbjct: 163 TETPSSHL------------PRSLAPSSSLH-WIPPAAGSLKINCDASWSKGPNRGWGGI 217

Query: 199 ILRDWSGS 207
           ILRD  G+
Sbjct: 223 ILRDSHGN 217

[Close]
BLAST of Lcy02g004750 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 52.4 bits (124), Expect = 5.4e-07
Identity = 28/108 (25.93%), Postives = 51/108 (47.22%), Query Frame = 0 

Query: 101 ICWQIWTHRNEITQRQKQLDLRLLKDRISKYMSEFILNKDTHQRHLRSHSATASESAQPR 160
           + W++W +RNE+  R ++ + + +  R    + E+ +              T +ES   +
Sbjct: 363 LLWRLWKNRNELVFRGREFNAQEVLRRAEDDLEEWRIR-------------TEAESCGTK 422

Query: 161 NLQSNDAPPLWIPAPIGIYKLNCDATWSQAKQRGGIGWILRDWSGSTR 209
              +  +   W P P    K N DATW++  +R GIGW+LR+  G  +
Sbjct: 423 PQVNRSSCGRWRPPPHQWVKCNTDATWNRDNERCGIGWVLRNEKGEVK 457

[Close]
BLAST of Lcy02g004750 vs. TAIR 10
Match: AT2G34320.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 47.8 bits (112), Expect = 1.3e-05
Identity = 32/105 (30.48%), Postives = 45/105 (42.86%), Query Frame = 0 

Query: 101 ICWQIWTHRNEITQRQKQLDLRLLKDRISKYMSEFILNKDTHQRHLRSHSATASESAQPR 160
           + W++W  RNE+  + K+ D   +  R  +   E+   ++   +        AS     R
Sbjct: 80  LLWRLWKSRNELMFKGKEYDAPEVLRRAMEDFEEWSTRRELEGK--------ASGPQVER 139

Query: 161 NLQSNDAPPLWIPAPIGIYKLNCDATWSQAKQRGGIGWILRDWSG 206
           NL        W   P    K N DATW     R GIGWILR+ SG
Sbjct: 140 NLSVQ-----WKAPPYQWVKCNTDATWQLENPRCGIGWILRNESG 171

The following BLAST results are available for this feature:
BLAST of Lcy02g004750 vs.
Match NameE-valueIdentityDescription
BLAST of Lcy02g004750 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DNV96.4e-0829.60uncharacterized protein LOC111022403 OS=Momordica charantia OX=3673 GN=LOC111022... [more]
A0A6J1CQG03.2e-0732.26uncharacterized protein LOC111013216 OS=Momordica charantia OX=3673 GN=LOC111013... [more]
A0A803QSM72.1e-0636.45Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A6D2KWQ73.5e-0632.46Reverse transcriptase domain-containing protein OS=Microthlaspi erraticum OX=168... [more]
A0A6J5YDN06.0e-0635.29Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS50956 PE=... [more]
BLAST of Lcy02g004750 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022155262.11.3e-0729.60uncharacterized protein LOC111022403 [Momordica charantia][more]
XP_022143317.16.6e-0732.26uncharacterized protein LOC111013216 [Momordica charantia][more]
XP_030485564.14.3e-0636.45uncharacterized protein LOC115702254 [Cannabis sativa][more]
CAA7056903.17.3e-0632.46unnamed protein product [Microthlaspi erraticum][more]
KAG5532236.19.5e-0628.91hypothetical protein RHGRI_026761 [Rhododendron griersonianum][more]
BLAST of Lcy02g004750 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G29090.15.4e-0725.93Ribonuclease H-like superfamily protein [more]
AT2G34320.11.3e-0530.48Polynucleotidyl transferase, ribonuclease H-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 146..167
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 150..165

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy02g004750.1Lcy02g004750.1mRNA