Lcy02g004570 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy02g004570
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	RNase H domain-containing protein
Location	Chr02: 5967785 .. 5968237 (+)
RNA-Seq Expression	Lcy02g004570
Synteny	Lcy02g004570

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCTTGGTCTCCCCCCCCTCCCCCCCGGCGGTACTCTCAAACTGAATGTGGATGCCTCATGGGATAGCTCTTGCAGGAGAGAGGGTGTTGGGTGGATTATCCGTGATTCCCTTGGATCTCCTCTCGGCAAAGGATGCAAAAAATGGGATCGGGGTTGGTCAATCAAGGCTATGGAAAGTCAAGAGATTAAAGAAGGGCTTCAAGCTTACTTGGAATCCGGAAACAACGATAGAGCCCCAATCATCGTGGAATCAGACGCGATAGAGGTCGTCAATGGCCTGAATTGGGAGTGCGTCGATCTATCGGAAGCCAAGGCGGTGCTGTCAGACATTGAAGCTCTGGCATCCAAGGTTGGGGCGATCTCTTTTAATTTCTGCCCTCGGGCATATGATAGGAGCGCGAATTGTCTCGCTCGTTTGGCGACTAGGCTAAGGCCGCTGGGGTGTTGA

mRNA sequence

ATGGAGCTTGGTCTCCCCCCCCTCCCCCCCGGCGGTACTCTCAAACTGAATGTGGATGCCTCATGGGATAGCTCTTGCAGGAGAGAGGGTGTTGGGTGGATTATCCGTGATTCCCTTGGATCTCCTCTCGGCAAAGGATGCAAAAAATGGGATCGGGGTTGGTCAATCAAGGCTATGGAAAGTCAAGAGATTAAAGAAGGGCTTCAAGCTTACTTGGAATCCGGAAACAACGATAGAGCCCCAATCATCGTGGAATCAGACGCGATAGAGGTCGTCAATGGCCTGAATTGGGAGTGCGTCGATCTATCGGAAGCCAAGGCGGTGCTGTCAGACATTGAAGCTCTGGCATCCAAGGTTGGGGCGATCTCTTTTAATTTCTGCCCTCGGGCATATGATAGGAGCGCGAATTGTCTCGCTCGTTTGGCGACTAGGCTAAGGCCGCTGGGGTGTTGA

Coding sequence (CDS)

ATGGAGCTTGGTCTCCCCCCCCTCCCCCCCGGCGGTACTCTCAAACTGAATGTGGATGCCTCATGGGATAGCTCTTGCAGGAGAGAGGGTGTTGGGTGGATTATCCGTGATTCCCTTGGATCTCCTCTCGGCAAAGGATGCAAAAAATGGGATCGGGGTTGGTCAATCAAGGCTATGGAAAGTCAAGAGATTAAAGAAGGGCTTCAAGCTTACTTGGAATCCGGAAACAACGATAGAGCCCCAATCATCGTGGAATCAGACGCGATAGAGGTCGTCAATGGCCTGAATTGGGAGTGCGTCGATCTATCGGAAGCCAAGGCGGTGCTGTCAGACATTGAAGCTCTGGCATCCAAGGTTGGGGCGATCTCTTTTAATTTCTGCCCTCGGGCATATGATAGGAGCGCGAATTGTCTCGCTCGTTTGGCGACTAGGCTAAGGCCGCTGGGGTGTTGA

Protein sequence

MELGLPPLPPGGTLKLNVDASWDSSCRREGVGWIIRDSLGSPLGKGCKKWDRGWSIKAMESQEIKEGLQAYLESGNNDRAPIIVESDAIEVVNGLNWECVDLSEAKAVLSDIEALASKVGAISFNFCPRAYDRSANCLARLATRLRPLGC

Homology

[Close]

BLAST of Lcy02g004570 vs. ExPASy TrEMBL
Match: A0A6J5UV01 (Reverse transcriptase domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS32434 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 6.6e-12
Identity = 47/137 (34.31%), Postives = 81/137 (59.12%), Query Frame = 0


Query: 10   PGGTLKLNVDASWDSSCRREGVGWIIRDSLGSPLGKGCKKWDRGWSIKAMESQEIKEGLQ 69
            P G LK+N DA+W S  +  GVGW++RDS G  +  GCK   RG S  AME++ I+E L 
Sbjct: 1063 PYGVLKVNCDAAWVSQTQMGGVGWVVRDSYGWMVQAGCKGDMRGGSALAMEAKAIREALL 1122

Query: 70   AYLESGNNDRAPIIVESDAIEVVNGLNWEC-VDLSEAKAVLSDIEALASKVGAISFNFCP 129
            A ++SG    + + VESD+++++  L  E  +D++  + ++ DI+ L  +     F + P
Sbjct: 1123 ACVQSG---LSKLEVESDSLQLIRMLGGEWNIDIA-VETIVFDIKQLVCQFQHCVFLYTP 1182

Query: 130  RAYDRSANCLARLATRL 146
            R  +++A+ +    +R+
Sbjct: 1183 RNCNKAAHKITAFVSRV 1195

[Close]

BLAST of Lcy02g004570 vs. ExPASy TrEMBL
Match: A0A6J5UAY2 (Reverse transcriptase domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS20161 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 2.5e-11
Identity = 47/137 (34.31%), Postives = 77/137 (56.20%), Query Frame = 0


Query: 9    PPGGTLKLNVDASWDSSCRREGVGWIIRDSLGSPLGKGCKKWDRGWSIKAMESQEIKEGL 68
            PP G LK+N DA+W S  +  GVGW++RDS G  +  G K   RG S  AME++ I+E L
Sbjct: 1150 PPYGVLKVNCDAAWVSQTQMGGVGWVVRDSDGWMVQAGGKGDMRGGSALAMEAEAIREAL 1209

Query: 69   QAYLESGNNDRAPIIVESDAIEVVNGLNWECVDLSEAKAVLSDIEALASKVGAISFNFCP 128
             A ++SG    + + VESD+++V+  +  E         ++ DI+ L  +     F + P
Sbjct: 1210 VACVQSG---LSKLEVESDSLQVIRMIGGEWNMDIAVDTIVFDIKQLVGQFQHCVFLYTP 1269

Query: 129  RAYDRSANCLARLATRL 146
            R  +++A+ +A   +R+
Sbjct: 1270 RNCNKAAHKIAAFVSRV 1283

[Close]

BLAST of Lcy02g004570 vs. ExPASy TrEMBL
Match: A0A4Y1R838 (Ribonuclease H-like superfamily protein OS=Prunus dulcis OX=3755 GN=Prudu_010255 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 1.6e-10
Identity = 44/137 (32.12%), Postives = 74/137 (54.01%), Query Frame = 0


Query: 9   PPGGTLKLNVDASWDSSCRREGVGWIIRDSLGSPLGKGCKKWDRGWSIKAMESQEIKEGL 68
           PP G +KLN D +W +   R GVGW++RD +G  +  G     R  S    E++ ++E L
Sbjct: 445 PPPGLVKLNCDGAWVAQTGRGGVGWVLRDGIGCFISAGGCGDMRCTSALMAEAEAVREAL 504

Query: 69  QAYLESGNNDRAPIIVESDAIEVVNGLNWECVDLSEAKAVLSDIEALASKVGAISFNFCP 128
              LE G +    + VESD++ ++  LN E V   E + +L D+  L+ +   + F + P
Sbjct: 505 TWCLELGFD---KVAVESDSLSLIKMLNKEDVVDLEIEGILFDVHCLSHRAHHVEFLYAP 564

Query: 129 RAYDRSANCLARLATRL 146
           R  +++A+ +A  A R+
Sbjct: 565 RKCNQAAHNVAAYAFRI 578

[Close]

BLAST of Lcy02g004570 vs. ExPASy TrEMBL
Match: A0A6J5WPU6 (Reverse transcriptase domain-containing protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS20372 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 2.8e-10
Identity = 47/136 (34.56%), Postives = 71/136 (52.21%), Query Frame = 0


Query: 9   PPGGTLKLNVDASWDSSCRREGVGWIIRDSLGSPLGKGCKKWDRGWSIKAMESQEIKEGL 68
           PP G LK+N DA+W +     GVGW+IRDS G  L  G +    G S   ME   I+  L
Sbjct: 799 PPPGLLKVNCDAAWSAQRMGGGVGWVIRDSFGLLLCAGGQGDLHGSSAIMMELLAIRHAL 858

Query: 69  QAYLESGNNDRAPIIVESDAIEVVNGLNWECVDLSEAKAVLSDIEALASKVGAISFNFCP 128
               E  N     IIVESD+ + +  LN      S+ + ++ DI  L + +  +SF F P
Sbjct: 859 S---ECANFHLTDIIVESDSQKGILMLNGRATVDSDLEGIVFDIRQLVASLSRVSFVFAP 918

Query: 129 RAYDRSANCLARLATR 145
           R+ +++A+ +A   ++
Sbjct: 919 RSCNQAAHSVAGFVSK 931

[Close]

BLAST of Lcy02g004570 vs. ExPASy TrEMBL
Match: A0A6J5UE59 (Reverse transcriptase domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS23353 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 1.4e-09
Identity = 47/136 (34.56%), Postives = 71/136 (52.21%), Query Frame = 0


Query: 9    PPGGTLKLNVDASWDSSCRREGVGWIIRDSLGSPLGKGCKKWDRGWSIKAMESQEIKEGL 68
            P  G LK+N DA+W +     GVGW+IRDS G  L  G +    G S   ME   I+  L
Sbjct: 1130 PSLGLLKVNCDAAWSAQRMGGGVGWVIRDSFGLLLCAGGQGDLHGSSAIMMELLAIRHAL 1189

Query: 69   QAYLESGNNDRAPIIVESDAIEVVNGLNWECVDLSEAKAVLSDIEALASKVGAISFNFCP 128
                E  N     IIVESD+ + +  LN      S+ + ++ DI  L + +  +SF F P
Sbjct: 1190 S---ECANFHLTDIIVESDSQKGILMLNGRATVDSDLEGIVFDIRQLVASLSRVSFVFAP 1249

Query: 129  RAYDRSANCLARLATR 145
            R+ +++A+ +A  A++
Sbjct: 1250 RSCNQAAHSVAGFASK 1262

[Close]

BLAST of Lcy02g004570 vs. NCBI nr
Match: CAB4279811.1 (unnamed protein product [Prunus armeniaca])

HSP 1 Score: 80.5 bits (197), Expect = 1.4e-11
Identity = 47/137 (34.31%), Postives = 81/137 (59.12%), Query Frame = 0


Query: 10   PGGTLKLNVDASWDSSCRREGVGWIIRDSLGSPLGKGCKKWDRGWSIKAMESQEIKEGLQ 69
            P G LK+N DA+W S  +  GVGW++RDS G  +  GCK   RG S  AME++ I+E L 
Sbjct: 1063 PYGVLKVNCDAAWVSQTQMGGVGWVVRDSYGWMVQAGCKGDMRGGSALAMEAKAIREALL 1122

Query: 70   AYLESGNNDRAPIIVESDAIEVVNGLNWEC-VDLSEAKAVLSDIEALASKVGAISFNFCP 129
            A ++SG    + + VESD+++++  L  E  +D++  + ++ DI+ L  +     F + P
Sbjct: 1123 ACVQSG---LSKLEVESDSLQLIRMLGGEWNIDIA-VETIVFDIKQLVCQFQHCVFLYTP 1182

Query: 130  RAYDRSANCLARLATRL 146
            R  +++A+ +    +R+
Sbjct: 1183 RNCNKAAHKITAFVSRV 1195

[Close]

BLAST of Lcy02g004570 vs. NCBI nr
Match: CAB4273082.1 (unnamed protein product [Prunus armeniaca])

HSP 1 Score: 78.6 bits (192), Expect = 5.2e-11
Identity = 47/137 (34.31%), Postives = 77/137 (56.20%), Query Frame = 0


Query: 9    PPGGTLKLNVDASWDSSCRREGVGWIIRDSLGSPLGKGCKKWDRGWSIKAMESQEIKEGL 68
            PP G LK+N DA+W S  +  GVGW++RDS G  +  G K   RG S  AME++ I+E L
Sbjct: 1150 PPYGVLKVNCDAAWVSQTQMGGVGWVVRDSDGWMVQAGGKGDMRGGSALAMEAEAIREAL 1209

Query: 69   QAYLESGNNDRAPIIVESDAIEVVNGLNWECVDLSEAKAVLSDIEALASKVGAISFNFCP 128
             A ++SG    + + VESD+++V+  +  E         ++ DI+ L  +     F + P
Sbjct: 1210 VACVQSG---LSKLEVESDSLQVIRMIGGEWNMDIAVDTIVFDIKQLVGQFQHCVFLYTP 1269

Query: 129  RAYDRSANCLARLATRL 146
            R  +++A+ +A   +R+
Sbjct: 1270 RNCNKAAHKIAAFVSRV 1283

[Close]

BLAST of Lcy02g004570 vs. NCBI nr
Match: BBH00303.1 (Ribonuclease H-like superfamily protein [Prunus dulcis])

HSP 1 Score: 75.9 bits (185), Expect = 3.4e-10
Identity = 44/137 (32.12%), Postives = 74/137 (54.01%), Query Frame = 0


Query: 9   PPGGTLKLNVDASWDSSCRREGVGWIIRDSLGSPLGKGCKKWDRGWSIKAMESQEIKEGL 68
           PP G +KLN D +W +   R GVGW++RD +G  +  G     R  S    E++ ++E L
Sbjct: 445 PPPGLVKLNCDGAWVAQTGRGGVGWVLRDGIGCFISAGGCGDMRCTSALMAEAEAVREAL 504

Query: 69  QAYLESGNNDRAPIIVESDAIEVVNGLNWECVDLSEAKAVLSDIEALASKVGAISFNFCP 128
              LE G +    + VESD++ ++  LN E V   E + +L D+  L+ +   + F + P
Sbjct: 505 TWCLELGFD---KVAVESDSLSLIKMLNKEDVVDLEIEGILFDVHCLSHRAHHVEFLYAP 564

Query: 129 RAYDRSANCLARLATRL 146
           R  +++A+ +A  A R+
Sbjct: 565 RKCNQAAHNVAAYAFRI 578

[Close]

BLAST of Lcy02g004570 vs. NCBI nr
Match: CAB4303756.1 (unnamed protein product [Prunus armeniaca])

HSP 1 Score: 75.1 bits (183), Expect = 5.8e-10
Identity = 47/136 (34.56%), Postives = 71/136 (52.21%), Query Frame = 0


Query: 9   PPGGTLKLNVDASWDSSCRREGVGWIIRDSLGSPLGKGCKKWDRGWSIKAMESQEIKEGL 68
           PP G LK+N DA+W +     GVGW+IRDS G  L  G +    G S   ME   I+  L
Sbjct: 799 PPPGLLKVNCDAAWSAQRMGGGVGWVIRDSFGLLLCAGGQGDLHGSSAIMMELLAIRHAL 858

Query: 69  QAYLESGNNDRAPIIVESDAIEVVNGLNWECVDLSEAKAVLSDIEALASKVGAISFNFCP 128
               E  N     IIVESD+ + +  LN      S+ + ++ DI  L + +  +SF F P
Sbjct: 859 S---ECANFHLTDIIVESDSQKGILMLNGRATVDSDLEGIVFDIRQLVASLSRVSFVFAP 918

Query: 129 RAYDRSANCLARLATR 145
           R+ +++A+ +A   ++
Sbjct: 919 RSCNQAAHSVAGFVSK 931

[Close]

BLAST of Lcy02g004570 vs. NCBI nr
Match: XP_028945257.1 (uncharacterized protein LOC114819788 [Malus domestica])

HSP 1 Score: 73.6 bits (179), Expect = 1.7e-09
Identity = 42/132 (31.82%), Postives = 71/132 (53.79%), Query Frame = 0


Query: 9   PPGGTLKLNVDASWDSSCRREGVGWIIRDSLGSPLGKGCKKWDRGWSIKAMESQEIKEGL 68
           P  G LK+N DASW  +  R GVGW+ RD  G   G G    +   S    E+  I+  L
Sbjct: 826 PAFGVLKVNTDASWCKTTLRTGVGWVCRDFAGLLHGAGGSGVELCHSAAVGEAAAIRTAL 885

Query: 69  QAYLESGNNDRAPIIVESDAIEVVNGLNWECVDLSEAKAVLSDIEALASKVGAISFNFCP 128
            A ++ G ++   +++ESDA  ++  +  E       + +L DIE LA ++ ++SF++ P
Sbjct: 886 MACIDYGYDN---VVIESDAKVIIQMIRHELDHDFSLECILGDIEVLACRLRSVSFSYVP 945

Query: 129 RAYDRSANCLAR 141
           R  + +A+ +A+
Sbjct: 946 RESNVAAHSVAK 954

[Close]

BLAST of Lcy02g004570 vs. TAIR 10
Match: AT2G34320.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 58.5 bits (140), Expect = 5.2e-09
Identity = 42/136 (30.88%), Postives = 63/136 (46.32%), Query Frame = 0


Query: 9   PPGGTLKLNVDASWDSSCRREGVGWIIRDSLGSPLGKGCKKWDRGWSIKAMESQEIKEGL 68
           PP   +K N DA+W     R G+GWI+R+  G  L  G +   R  ++   E + ++   
Sbjct: 140 PPYQWVKCNTDATWQLENPRCGIGWILRNESGGVLWMGARALPRTKNVLEAELEALR--- 199

Query: 69  QAYLESGNNDRAPIIVESDAIEVVNGLN----WECVDLSEAKAVLSDIEALASKVGAISF 128
            A L     +   II ESDA  +VN LN    W  +     +  L DI+ L      + F
Sbjct: 200 WAVLTMSRFNYKRIIFESDAQALVNLLNSDDFWPTL-----QPALEDIQQLLHHFEEVKF 259

Query: 129 NFCPRAYDRSANCLAR 141
            F PR  ++ A+ +AR
Sbjct: 260 EFTPRGGNKVADRIAR 267

[Close]

BLAST of Lcy02g004570 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 52.4 bits (124), Expect = 3.7e-07
Identity = 35/132 (26.52%), Postives = 62/132 (46.97%), Query Frame = 0


Query: 9   PPGGTLKLNVDASWDSSCRREGVGWIIRDSLGSPLGKGCKKWDRGWSIKAMESQEIKEGL 68
           PP   +K N DA+W+    R G+GW++R+  G     G +   +   +K++   E++   
Sbjct: 423 PPHQWVKCNTDATWNRDNERCGIGWVLRNEKGEVKWMGARALPK---LKSVLEAELEAMR 482

Query: 69  QAYLESGNNDRAPIIVESDAIEVVNGLNWECVDLSEAKAVLSDIEALASKVGAISFNFCP 128
            A L         +I ESD+  ++  LN + +     K  + D++ L S+   + F F P
Sbjct: 483 WAVLSLSRFQYNYVIFESDSQVLIEILNNDEI-WPSLKPTIQDLQRLLSQFTEVKFVFIP 542

Query: 129 RAYDRSANCLAR 141
           R  +  A  +AR
Sbjct: 543 REGNTLAERVAR 550

[Close]

BLAST of Lcy02g004570 vs. TAIR 10
Match: AT3G09510.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 48.9 bits (115), Expect = 4.1e-06
Identity = 38/135 (28.15%), Postives = 60/135 (44.44%), Query Frame = 0


Query: 9   PPGGTLKLNVDASWDSSCRREGVGWIIRDSLGSPLGKGCKKWDRGWSIKAMESQEIKEGL 68
           PP   +K N DA +D        GWIIR+  G+P+  G  K     +    E++ +   L
Sbjct: 329 PPATYVKCNFDAGFDVQKLEATGGWIIRNHYGTPISWGSMKLAHTSNPLEAETKALLAAL 388

Query: 69  QAYLESGNNDRAPIIVESDA---IEVVNGLNWECVDLSEAKAVLSDIEALASKVGAISFN 128
           Q     G      + +E D    I ++NG+++     S     L DI   A+K  +I F 
Sbjct: 389 QQTWIRGYTQ---VFMEGDCQTLINLINGISFH----SSLANHLEDISFWANKFASIQFG 448

Query: 129 FCPRAYDRSANCLAR 141
           F  R  ++ A+ LA+
Sbjct: 449 FIRRKGNKLAHVLAK 456

[Close]

BLAST of Lcy02g004570 vs. TAIR 10
Match: AT2G04420.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 42.4 bits (98), Expect = 3.9e-04
Identity = 34/132 (25.76%), Postives = 64/132 (48.48%), Query Frame = 0


Query: 9   PPGGTLKLNVDASWDSSCRREGVGWIIRDSLGSPLGKGCKKWDRGWSIKAMESQEIKEGL 68
           PP G +K N D S++   ++   GW+IRD  G    KG  +   G    A+ES E++  +
Sbjct: 66  PPMGWIKCNYDGSFNYRTQQTNSGWLIRDDKG--FYKGAAQAVGGTMNNALES-ELQALV 125

Query: 69  QAYLESGNNDRAPIIVESDAIEVVNGLNWECVDLSEAKAVLSDIEALASKVGAISFNFCP 128
            A   + +     +I E D+ +V   LN + +    A   + +  + + +   + F++ P
Sbjct: 126 MAMQHTWSQGYRKVIFEGDSKQVEELLNRKQMHFG-AFNWIREAWSWSKRFEEVIFSWTP 185

Query: 129 RAYDRSANCLAR 141
           R  ++ A+ LA+
Sbjct: 186 RTNNQPADMLAK 193

[Close]

BLAST of Lcy02g004570 vs. TAIR 10
Match: AT5G65005.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 42.0 bits (97), Expect = 5.0e-04
Identity = 36/137 (26.28%), Postives = 61/137 (44.53%), Query Frame = 0


Query: 9   PPG-GTLKLNVDASWDSSCRREGVGWIIRDSLGSPLGKGCKKWDRGWSIKAMESQEIKEG 68
           PPG   LK N DAS        G+GWI+R+S G+ +  G  K+    + +  E   +   
Sbjct: 107 PPGRDKLKCNYDASHHERNTVSGLGWILRNSQGTVIECGMGKFQGRMTTEEAECSTLIWA 166

Query: 69  LQAYLESGNNDRAPIIVESDAIEVVNGLNWECVDLSEAKAVLSDIEALASKVGAISFNFC 128
           +QA    G+     +I E D   +   +N +  +    +  L  I++      +I F+F 
Sbjct: 167 IQASYGFGHK---KVIFEGDNQTITRMINTKSSN-PRLQHFLDTIQSWIPSFESIEFSFK 226

Query: 129 PRAYDRSANCLARLATR 145
            R  +  A+ LA+ A +
Sbjct: 227 HREQNGCADFLAKQAIK 239

The following BLAST results are available for this feature:

BLAST of Lcy02g004570 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy02g004570 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J5UV01	6.6e-12	34.31	Reverse transcriptase domain-containing protein OS=Prunus armeniaca OX=36596 GN=...	[more]
A0A6J5UAY2	2.5e-11	34.31	Reverse transcriptase domain-containing protein OS=Prunus armeniaca OX=36596 GN=...	[more]
A0A4Y1R838	1.6e-10	32.12	Ribonuclease H-like superfamily protein OS=Prunus dulcis OX=3755 GN=Prudu_010255...	[more]
A0A6J5WPU6	2.8e-10	34.56	Reverse transcriptase domain-containing protein OS=Prunus armeniaca OX=36596 GN=...	[more]
A0A6J5UE59	1.4e-09	34.56	Reverse transcriptase domain-containing protein OS=Prunus armeniaca OX=36596 GN=...	[more]

BLAST of Lcy02g004570 vs. NCBI nr


Match Name	E-value	Identity	Description
CAB4279811.1	1.4e-11	34.31	unnamed protein product [Prunus armeniaca]	[more]
CAB4273082.1	5.2e-11	34.31	unnamed protein product [Prunus armeniaca]	[more]
BBH00303.1	3.4e-10	32.12	Ribonuclease H-like superfamily protein [Prunus dulcis]	[more]
CAB4303756.1	5.8e-10	34.56	unnamed protein product [Prunus armeniaca]	[more]
XP_028945257.1	1.7e-09	31.82	uncharacterized protein LOC114819788 [Malus domestica]	[more]

BLAST of Lcy02g004570 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G34320.1	5.2e-09	30.88	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT4G29090.1	3.7e-07	26.52	Ribonuclease H-like superfamily protein	[more]
AT3G09510.1	4.1e-06	28.15	Ribonuclease H-like superfamily protein	[more]
AT2G04420.1	3.9e-04	25.76	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT5G65005.1	5.0e-04	26.28	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002156	Ribonuclease H domain	PFAM	PF13456	RVT_3	coord: 17..142 e-value: 2.9E-15 score: 56.2
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 13..146 e-value: 3.6E-9 score: 38.7
None	No IPR available	PANTHER	PTHR33033	POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN-RELATED	coord: 9..143
None	No IPR available	PANTHER	PTHR33033:SF67	SUBFAMILY NOT NAMED	coord: 9..143
IPR044730	Ribonuclease H-like domain, plant type	CDD	cd06222	RNase_H_like	coord: 16..140 e-value: 7.3635E-17 score: 69.6504
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 13..145

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy02g004570.1	Lcy02g004570.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity