Lcy02g004520 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AACCCATTAATGCGCTTCAACTTCCCTTCTTCATTATCAAATCAAAACTTCAATACAGAAAACAGAGCAAAAAACAGAGAGCAAAAGAAAAAAAAAATGCTGAAGCAACATTTCAGCCACCGCCACCCACTCACCGCCGCAACGGTGGAGAAGGACGACGGAGCAATCTGCTCCGGCTGCGAGCTCGGACTTTCCGGCGCCGCCTACAAGTGCACAAAGCCCAAATGCGAATTCCATCTCCACGACCTCTGTTTCGCCCTCCCGCCGGAGATCCACCACCCCTCTCACCCAAAACACCCCCTCTTCCTGGCCGGAGCTCCGCCGTACGACGGGGGGGAGTTCGCCTGCGACGGGTGCGGCGACGTCGGGTCCGGGTTCATCTACCGGTGCCCCCGGTGCCAGTTCGACCTGCACATCCACTGCGCCGCCCTGCCGGAGACCGTCGTCGGAAAAAACCACGGACACCCGCTCCGGCTTGAGTTCAGTTCAAAGGGGAAGGGATTTTGCTGCGGTGTTTGTGAGGGAGGATTTGGAAATGGGTGTTGGGTTTATTACTGTGGGGATTGTGAATTTGGAGTTCATGTTGACTGTTTTGTGGCTGAAGATGAAGGAGAGGAGGAAGAAATTGAATGATTTGGCTGAAGAAGATAATGGTTTTTTTTTTTTTTTAAACTGTAATTGTATAGACTTTGATCCTTTTTTTTTTAAGAATGTTTTTGTATTTTGGGTTGTATTTTGATATGTTTGGATTATGTGTTTTTGTTGTTCATCATTTTGTTAGTTTCTAGTTAAGTCAGACATGTATCGTGGATCAAGAAGTCAAATGTTCGAATCTTCATCTGTTAAACTAAAAAAATTAATTTCGAT AACCCATTAATGCGCTTCAACTTCCCTTCTTCATTATCAAATCAAAACTTCAATACAGAAAACAGAGCAAAAAACAGAGAGCAAAAGAAAAAAAAAATGCTGAAGCAACATTTCAGCCACCGCCACCCACTCACCGCCGCAACGGTGGAGAAGGACGACGGAGCAATCTGCTCCGGCTGCGAGCTCGGACTTTCCGGCGCCGCCTACAAGTGCACAAAGCCCAAATGCGAATTCCATCTCCACGACCTCTGTTTCGCCCTCCCGCCGGAGATCCACCACCCCTCTCACCCAAAACACCCCCTCTTCCTGGCCGGAGCTCCGCCGTACGACGGGGGGGAGTTCGCCTGCGACGGGTGCGGCGACGTCGGGTCCGGGTTCATCTACCGGTGCCCCCGGTGCCAGTTCGACCTGCACATCCACTGCGCCGCCCTGCCGGAGACCGTCGTCGGAAAAAACCACGGACACCCGCTCCGGCTTGAGTTCAGTTCAAAGGGGAAGGGATTTTGCTGCGGTGTTTGTGAGGGAGGATTTGGAAATGGGTGTTGGGTTTATTACTGTGGGGATTGTGAATTTGGAGTTCATGTTGACTGTTTTGTGGCTGAAGATGAAGGAGAGGAGGAAGAAATTGAATGATTTGGCTGAAGAAGATAATGGTTTTTTTTTTTTTTTAAACTGTAATTGTATAGACTTTGATCCTTTTTTTTTTAAGAATGTTTTTGTATTTTGGGTTGTATTTTGATATGTTTGGATTATGTGTTTTTGTTGTTCATCATTTTGTTAGTTTCTAGTTAAGTCAGACATGTATCGTGGATCAAGAAGTCAAATGTTCGAATCTTCATCTGTTAAACTAAAAAAATTAATTTCGAT ATGCGCTTCAACTTCCCTTCTTCATTATCAAATCAAAACTTCAATACAGAAAACAGAGCAAAAAACAGAGAGCAAAAGAAAAAAAAAATGCTGAAGCAACATTTCAGCCACCGCCACCCACTCACCGCCGCAACGGTGGAGAAGGACGACGGAGCAATCTGCTCCGGCTGCGAGCTCGGACTTTCCGGCGCCGCCTACAAGTGCACAAAGCCCAAATGCGAATTCCATCTCCACGACCTCTGTTTCGCCCTCCCGCCGGAGATCCACCACCCCTCTCACCCAAAACACCCCCTCTTCCTGGCCGGAGCTCCGCCGTACGACGGGGGGGAGTTCGCCTGCGACGGGTGCGGCGACGTCGGGTCCGGGTTCATCTACCGGTGCCCCCGGTGCCAGTTCGACCTGCACATCCACTGCGCCGCCCTGCCGGAGACCGTCGTCGGAAAAAACCACGGACACCCGCTCCGGCTTGAGTTCAGTTCAAAGGGGAAGGGATTTTGCTGCGGTGTTTGTGAGGGAGGATTTGGAAATGGGTGTTGGGTTTATTACTGTGGGGATTGTGAATTTGGAGTTCATGTTGACTGTTTTGTGGCTGAAGATGAAGGAGAGGAGGAAGAAATTGAATGA MRFNFPSSLSNQNFNTENRAKNREQKKKKMLKQHFSHRHPLTAATVEKDDGAICSGCELGLSGAAYKCTKPKCEFHLHDLCFALPPEIHHPSHPKHPLFLAGAPPYDGGEFACDGCGDVGSGFIYRCPRCQFDLHIHCAALPETVVGKNHGHPLRLEFSSKGKGFCCGVCEGGFGNGCWVYYCGDCEFGVHVDCFVAEDEGEEEEIE Homology
BLAST of Lcy02g004520 vs. ExPASy Swiss-Prot
Match: Q7Y0E8 (Probable nucleoredoxin 1-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0405500 PE=2 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 1.2e-05 Identity = 24/66 (36.36%), Postives = 33/66 (50.00%), Query Frame = 0
BLAST of Lcy02g004520 vs. ExPASy Swiss-Prot
Match: Q7Y0F2 (Probable nucleoredoxin 1-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0405900 PE=2 SV=1) HSP 1 Score: 48.5 bits (114), Expect = 1.0e-04 Identity = 24/66 (36.36%), Postives = 32/66 (48.48%), Query Frame = 0
BLAST of Lcy02g004520 vs. ExPASy TrEMBL
Match: A0A6J1IYQ9 (uncharacterized protein LOC111481877 OS=Cucurbita maxima OX=3661 GN=LOC111481877 PE=4 SV=1) HSP 1 Score: 351.7 bits (901), Expect = 2.1e-93 Identity = 153/178 (85.96%), Postives = 161/178 (90.45%), Query Frame = 0
BLAST of Lcy02g004520 vs. ExPASy TrEMBL
Match: A0A6J1F936 (uncharacterized protein LOC111441955 OS=Cucurbita moschata OX=3662 GN=LOC111441955 PE=4 SV=1) HSP 1 Score: 348.6 bits (893), Expect = 1.8e-92 Identity = 151/178 (84.83%), Postives = 161/178 (90.45%), Query Frame = 0
BLAST of Lcy02g004520 vs. ExPASy TrEMBL
Match: A0A0A0LEY9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G705670 PE=4 SV=1) HSP 1 Score: 344.7 bits (883), Expect = 2.6e-91 Identity = 151/177 (85.31%), Postives = 160/177 (90.40%), Query Frame = 0
BLAST of Lcy02g004520 vs. ExPASy TrEMBL
Match: A0A1S3CGR7 (probable nucleoredoxin 1-1 OS=Cucumis melo OX=3656 GN=LOC103500285 PE=4 SV=1) HSP 1 Score: 337.0 bits (863), Expect = 5.4e-89 Identity = 149/178 (83.71%), Postives = 156/178 (87.64%), Query Frame = 0
BLAST of Lcy02g004520 vs. ExPASy TrEMBL
Match: A0A5A7UBP3 (Putative nucleoredoxin 1-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold148G00350 PE=4 SV=1) HSP 1 Score: 303.9 bits (777), Expect = 5.1e-79 Identity = 133/155 (85.81%), Postives = 136/155 (87.74%), Query Frame = 0
BLAST of Lcy02g004520 vs. NCBI nr
Match: KAG7036565.1 (putative nucleoredoxin 1-1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 357.8 bits (917), Expect = 6.1e-95 Identity = 156/178 (87.64%), Postives = 163/178 (91.57%), Query Frame = 0
BLAST of Lcy02g004520 vs. NCBI nr
Match: XP_023525835.1 (uncharacterized protein LOC111789334 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 357.8 bits (917), Expect = 6.1e-95 Identity = 156/178 (87.64%), Postives = 162/178 (91.01%), Query Frame = 0
BLAST of Lcy02g004520 vs. NCBI nr
Match: XP_023528190.1 (uncharacterized protein LOC111791179 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 355.9 bits (912), Expect = 2.3e-94 Identity = 155/178 (87.08%), Postives = 162/178 (91.01%), Query Frame = 0
BLAST of Lcy02g004520 vs. NCBI nr
Match: KAG6606859.1 (putative nucleoredoxin 1-1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 353.2 bits (905), Expect = 1.5e-93 Identity = 153/178 (85.96%), Postives = 162/178 (91.01%), Query Frame = 0
BLAST of Lcy02g004520 vs. NCBI nr
Match: XP_022983237.1 (uncharacterized protein LOC111481877 [Cucurbita maxima]) HSP 1 Score: 351.7 bits (901), Expect = 4.4e-93 Identity = 153/178 (85.96%), Postives = 161/178 (90.45%), Query Frame = 0
BLAST of Lcy02g004520 vs. TAIR 10
Match: AT2G44380.1 (Cysteine/Histidine-rich C1 domain family protein ) HSP 1 Score: 183.7 bits (465), Expect = 1.5e-46 Identity = 84/179 (46.93%), Postives = 108/179 (60.34%), Query Frame = 0
BLAST of Lcy02g004520 vs. TAIR 10
Match: AT2G44370.1 (Cysteine/Histidine-rich C1 domain family protein ) HSP 1 Score: 182.6 bits (462), Expect = 3.3e-46 Identity = 83/182 (45.60%), Postives = 114/182 (62.64%), Query Frame = 0
BLAST of Lcy02g004520 vs. TAIR 10
Match: AT2G28270.1 (Cysteine/Histidine-rich C1 domain family protein ) HSP 1 Score: 175.6 bits (444), Expect = 4.0e-44 Identity = 80/179 (44.69%), Postives = 106/179 (59.22%), Query Frame = 0
BLAST of Lcy02g004520 vs. TAIR 10
Match: AT2G17740.1 (Cysteine/Histidine-rich C1 domain family protein ) HSP 1 Score: 174.9 bits (442), Expect = 6.9e-44 Identity = 77/176 (43.75%), Postives = 107/176 (60.80%), Query Frame = 0
BLAST of Lcy02g004520 vs. TAIR 10
Match: AT5G43520.1 (Cysteine/Histidine-rich C1 domain family protein ) HSP 1 Score: 174.5 bits (441), Expect = 9.0e-44 Identity = 84/195 (43.08%), Postives = 114/195 (58.46%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
|