Lcy02g004260 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy02g004260
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	RAB GTPase homolog A4C
Location	Chr02: 5636428 .. 5639104 (+)
RNA-Seq Expression	Lcy02g004260
Synteny	Lcy02g004260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAACCGTTAAAAAGGGGAACCCTTCACCAAGTCGTGGCTGCTCCTTCTCTTCTGCTTTCGTCCATGTCAAAACGCCTTCGCTTCTTCCCATTTCATTTCCATTTCAACTCTTCGCTAAACCCTTTTTTCCCTTCAATCAATCCTCCATTTCTTTTGATGTTCTTCTCAACCGCAAAGTTGTAGCATCACAACCCCTCGTAATCGCATCAGGCGATCGATTGGATCGATCGCTTGGTGTTCGATTTCCCCCCCCCCCTTTTCCCGATTCTTGCTTTTGAGGGGTTTTCTTTCGACGATCGGATTTAGATTGATTGTTTCGTTTCAGAGATGTCTAATTTGCAATCGAATTTCAATCAGAAGATTGATTATGTATTCAAGGTCGTGTTGATCGGAGACTCTGCGGTGGGGAAATCGCAGCTTCTATCTCGTTTTGCTAGGAATGATTTCAGTTTGGATTCCAAGGCGACAATTGGGGTTGAATTTCAGACGAAGACGCTTGTCATTGACCAGAAAACTATCAAGGCGCAGATATGGGATACTGCTGGACAGGAGAGGTACAAATCCCGCTATGTTCTTAGGGATTTCTTTGCTGTTTTCAATGATACTTAATTACGCTTTGAATTATACTAGTTATTCCAGAATTTCAATGTTTCAGATTTTGATATCAGCATGATTGATGTTTTAGTTATACATCCTTATTTGATGGTAATGAAAATTTATTTCGATGATTTGTTAGTTCATTGTAAATCTTGAACCTAATAATGGGTTTTGCTAACTTTCATTTCAGATGATCAAAATGCACTTAGTTTTAGTTAACCTTTATGTTATGTGAAAATCTTACATATTGTTGGTTCCAGTATGTTCATATAGATGATTTATGTATATATTTATTTTTTCCTTCAACTTGTGAAGTATTTTCTTTTGATAAAGAAAATGCACTTAAAGTTTTTTTTTTCTTTTGATATGATATCTAGTACTAGCTTTTCTTATATGCTATTTTGGAAGTAGAATTGATGATGCCTTTTTCACCATGGAAACAATCTTCTTGAAACTTCCTCTCTTATTTTTTGCTGCTTTAGTTTATTTTTCCATCTTTCCCCTCCCCTGCCCCTTCTATATGTTGGACTAATAGGTTTTGTATAGATTCGGTCGATATGAATATATATTGTCACCGAATTATAAATGCTTTGCACCTGAAATGTAACACAATCTGTATCCAATTCAGATTCATCTTCATTCTCATTAAAAAGATCATCCTTTATAACTATACAATTGCATTTCATACAGTAAAGGCTGGAACATTAAGCCTCAAGGCTAGTGGCTTCGAGTCAGGGACAGGGACTATTGCATGAGCTAGGAAACTTGTAAATGTGAGGCCTTAAGGTCCTCATGATCACTTAGTTAAGATGAGCACAAGAGTCTTTATCATCATGCTTGACTTAGGTATGTTGCTTTCCTATAGCCATACATACAGGTATTACTCATTAGAACCTATCAGTTTATTGTGAATTGATTTAGAAAATTGTTAGTGGGTCAAGAGAAATATGTGACTTTTGAAGGAGGTCTGACTATGCTCTTGTATTGTTGATGATGATTATAGTTTGACGATTACCTGTTAGGTCAGGTTTGGGGCCTGTTAGTATTGCCTAAATTCTGATGGTTGACATTAAGTGAAAAGTAACCTTTTGGAGTTTGTAAGGAGATGTTTTTTTTTTTTTGAAACGGAATTGTAAGGAGATGTTACATTCAAATGAGAGTGATTTTTAATTTTATCATATGGTAATTGTGGACGATATGGGCAAGTTTTATTCTCTGGTTTCTCTGTTTTTCTCTTATTAGTGATGATTTTCAGGTATCGTGCAGTGACAAGTGCGTACTACAGAGGTGCTGTGGGGGCAATGCTAGTCTACGACATGACGAAGCGTCAGTCGTTTGATCATATAGCTAGGTGGTTAGAGGAACTGCGTGGCCATGCAGACAAGAATATTGTTATAATGCTTATAGGAAACAAGTCCGATCTACGTTCTCTTCGCGTTGTGCCTACAGAAGATGCAAAAGAGTTTGCTCAAATGGAGAATCTGTTTTTCATGGAAACATCAGCACTCGAGGCAACTAATGTAGAGGCAGCATTCAACACTATCCTGACAGAAATTTACCGAGTTATTAGCAGGAAGGCACTGATTGCAAATGAGGAAACCGATTCTGGAGGAAGCACATCACTCCTCAAAGGAACAAAGCTTGTTGTCCCTGGACAAGAGCCCCAGCCTGCAAGATCTGGCTGTTGCAGAAGTTGACACAGTATTCTACTTTGATTTTACAATATTTTCACATGAATTGCTGCTTTTTACAGCCTACACAACCCCACAGGCCTCCCAAAGAGCACAAGAAGAAGAAATGGGAAAGTAAGTGATTGATTTTCTATCTAATCTTTAATTTTGGTCTTTCAGGAGACTAGTGTACTTCATACTTTTGATGATACAAGGTAAATAGTTCCTCTGTTCTAAGCTTTTTGTTTAGAGGCTTTGTCGCCAACATAAAGTACATTTTGGTTGAGCAAAAGCTTCATGTTTTCATTCTTATCTTCCTGTCTGTAAACCTTTAACATAAATATGGAATTTATCCACTTCAGGAGATGGCTGAATTTCAGGAATGGGACAAAGAATTTGACTCTTTA

mRNA sequence

AAAAAACCGTTAAAAAGGGGAACCCTTCACCAAGTCGTGGCTGCTCCTTCTCTTCTGCTTTCGTCCATGTCAAAACGCCTTCGCTTCTTCCCATTTCATTTCCATTTCAACTCTTCGCTAAACCCTTTTTTCCCTTCAATCAATCCTCCATTTCTTTTGATGTTCTTCTCAACCGCAAAGTTGTAGCATCACAACCCCTCGTAATCGCATCAGGCGATCGATTGGATCGATCGCTTGGTGTTCGATTTCCCCCCCCCCCTTTTCCCGATTCTTGCTTTTGAGGGGTTTTCTTTCGACGATCGGATTTAGATTGATTGTTTCGTTTCAGAGATGTCTAATTTGCAATCGAATTTCAATCAGAAGATTGATTATGTATTCAAGGTCGTGTTGATCGGAGACTCTGCGGTGGGGAAATCGCAGCTTCTATCTCGTTTTGCTAGGAATGATTTCAGTTTGGATTCCAAGGCGACAATTGGGGTTGAATTTCAGACGAAGACGCTTGTCATTGACCAGAAAACTATCAAGGCGCAGATATGGGATACTGCTGGACAGGAGAGGTATCGTGCAGTGACAAGTGCGTACTACAGAGGTGCTGTGGGGGCAATGCTAGTCTACGACATGACGAAGCGTCAGTCGTTTGATCATATAGCTAGGTGGTTAGAGGAACTGCGTGGCCATGCAGACAAGAATATTGTTATAATGCTTATAGGAAACAAGTCCGATCTACGTTCTCTTCGCGTTGTGCCTACAGAAGATGCAAAAGAGTTTGCTCAAATGGAGAATCTGTTTTTCATGGAAACATCAGCACTCGAGGCAACTAATGTAGAGGCAGCATTCAACACTATCCTGACAGAAATTTACCGAGTTATTAGCAGGAAGGCACTGATTGCAAATGAGGAAACCGATTCTGGAGGAAGCACATCACTCCTCAAAGGAACAAAGCTTGTTGTCCCTGGACAAGAGCCCCAGCCTGCAAGATCTGGCTGTTGCAGAAGTTGACACAGTATTCTACTTTGATTTTACAATATTTTCACATGAATTGCTGCTTTTTACAGCCTACACAACCCCACAGGCCTCCCAAAGAGCACAAGAAGAAGAAATGGGAAAGTAAGTGATTGATTTTCTATCTAATCTTTAATTTTGGTCTTTCAGGAGACTAGTGTACTTCATACTTTTGATGATACAAGGTAAATAGTTCCTCTGTTCTAAGCTTTTTGTTTAGAGGCTTTGTCGCCAACATAAAGTACATTTTGGTTGAGCAAAAGCTTCATGTTTTCATTCTTATCTTCCTGTCTGTAAACCTTTAACATAAATATGGAATTTATCCACTTCAGGAGATGGCTGAATTTCAGGAATGGGACAAAGAATTTGACTCTTTA

Coding sequence (CDS)

ATGTCTAATTTGCAATCGAATTTCAATCAGAAGATTGATTATGTATTCAAGGTCGTGTTGATCGGAGACTCTGCGGTGGGGAAATCGCAGCTTCTATCTCGTTTTGCTAGGAATGATTTCAGTTTGGATTCCAAGGCGACAATTGGGGTTGAATTTCAGACGAAGACGCTTGTCATTGACCAGAAAACTATCAAGGCGCAGATATGGGATACTGCTGGACAGGAGAGGTATCGTGCAGTGACAAGTGCGTACTACAGAGGTGCTGTGGGGGCAATGCTAGTCTACGACATGACGAAGCGTCAGTCGTTTGATCATATAGCTAGGTGGTTAGAGGAACTGCGTGGCCATGCAGACAAGAATATTGTTATAATGCTTATAGGAAACAAGTCCGATCTACGTTCTCTTCGCGTTGTGCCTACAGAAGATGCAAAAGAGTTTGCTCAAATGGAGAATCTGTTTTTCATGGAAACATCAGCACTCGAGGCAACTAATGTAGAGGCAGCATTCAACACTATCCTGACAGAAATTTACCGAGTTATTAGCAGGAAGGCACTGATTGCAAATGAGGAAACCGATTCTGGAGGAAGCACATCACTCCTCAAAGGAACAAAGCTTGTTGTCCCTGGACAAGAGCCCCAGCCTGCAAGATCTGGCTGTTGCAGAAGTTGA

Protein sequence

MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNDFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKNIVIMLIGNKSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSTSLLKGTKLVVPGQEPQPARSGCCRS

Homology

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BLAST of Lcy02g004260 vs. ExPASy Swiss-Prot
Match: Q9FE79 (Ras-related protein RABA4c OS=Arabidopsis thaliana OX=3702 GN=RABA4C PE=2 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 1.3e-98
Identity = 177/220 (80.45%), Postives = 202/220 (91.82%), Query Frame = 0


Query: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNDFSLDSKATIGVEFQTKTLVID 60
           MS  QSNFNQKIDYVFKVVLIGDSAVGKSQLL+RF+RN+FS++SKATIGVEFQT+TL ID
Sbjct: 1   MSKFQSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEID 60

Query: 61  QKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKN 120
           +KTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQSFDH+ARWLEELRGHADKN
Sbjct: 61  RKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKN 120

Query: 121 IVIMLIGNKSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180
           IVIMLIGNK+DL +LR VPTEDAKEFAQ ENLFFMETSAL++ NVE +F T+LTEIYR++
Sbjct: 121 IVIMLIGNKTDLGTLRAVPTEDAKEFAQRENLFFMETSALDSNNVEPSFLTVLTEIYRIV 180

Query: 181 SRKALIANEETDSGGSTSLLKGTKLVVPGQEPQPARSGCC 221
           S+K L+ANEE +SGG +SLL+GTK+VV G+E +    GCC
Sbjct: 181 SKKNLVANEEGESGGDSSLLQGTKIVVAGEETESKGKGCC 220

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BLAST of Lcy02g004260 vs. ExPASy Swiss-Prot
Match: P25766 (Ras-related protein RGP1 OS=Oryza sativa subsp. japonica OX=39947 GN=RGP1 PE=2 SV=2)

HSP 1 Score: 359.8 bits (922), Expect = 2.3e-98
Identity = 179/214 (83.64%), Postives = 200/214 (93.46%), Query Frame = 0


Query: 10  QKIDYVFKVVLIGDSAVGKSQLLSRFARNDFSLDSKATIGVEFQTKTLVIDQKTIKAQIW 69
           QKIDYVFKVVLIGDSAVGKSQLL+RFARN+F+LDSKATIGVEFQT+TL ID +T+KAQIW
Sbjct: 13  QKIDYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLHIDARTVKAQIW 72

Query: 70  DTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKNIVIMLIGNK 129
           DTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQSFDH+ARWLEELRGHADKNIVIMLIGNK
Sbjct: 73  DTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNK 132

Query: 130 SDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANE 189
           SDL +LRVVPTEDAKEFA+ ENLFFMETSALE+TNVE AF T+LTEIYR++S+K L+ANE
Sbjct: 133 SDLGTLRVVPTEDAKEFAERENLFFMETSALESTNVENAFMTVLTEIYRIVSKKNLVANE 192

Query: 190 ETDSGGSTSLLKGTKLVVPGQEP-QPARSGCCRS 223
           E DS G++SLLKGTK+VVPGQEP  P ++ CC S
Sbjct: 193 EVDSSGNSSLLKGTKIVVPGQEPAPPTKASCCMS 226

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BLAST of Lcy02g004260 vs. ExPASy Swiss-Prot
Match: Q9LH50 (Ras-related protein RABA4d OS=Arabidopsis thaliana OX=3702 GN=RABA4D PE=1 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 1.9e-97
Identity = 177/220 (80.45%), Postives = 202/220 (91.82%), Query Frame = 0


Query: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNDFSLDSKATIGVEFQTKTLVID 60
           MSNL  ++NQKIDYVFKVVLIGDSAVGK+QLL+RFARN+FS+DSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKN 120
            KT+KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDH+A+WLEELRGHADKN
Sbjct: 61  NKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKN 120

Query: 121 IVIMLIGNKSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180
           IVIMLIGNK DL SLR VPTEDA+EFAQ ENLFFMETSALEATNVE AF TILTEIYR+I
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRII 180

Query: 181 SRKALIANEETDSGGSTSLLKGTKLVVPGQEPQPARSGCC 221
           S+K+L A+++ D+ G++SLLKGT++++P ++    R GCC
Sbjct: 181 SKKSLTADDD-DADGNSSLLKGTRIIIPSEQESGKRGGCC 219

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BLAST of Lcy02g004260 vs. ExPASy Swiss-Prot
Match: Q40191 (Ras-related protein Rab11A OS=Lotus japonicus OX=34305 GN=RAB11A PE=2 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 4.4e-86
Identity = 161/216 (74.54%), Postives = 188/216 (87.04%), Query Frame = 0


Query: 9   NQKIDYVFKVVLIGDSAVGKSQLLSRFARNDFSLDSKATIGVEFQTKTLVIDQKTIKAQI 68
           N KIDYVFKVVLIGDSAVGKSQ+L+RFARN+FSLDSK+TIGVEFQT+TLVID KT+KAQI
Sbjct: 11  NAKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQI 70

Query: 69  WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKNIVIMLIGN 128
           WDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQ+FDHI RWLEELR HADKNIVI+LIGN
Sbjct: 71  WDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILIGN 130

Query: 129 KSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIAN 188
           K DL + R VPTEDAKEFA+ E LFF+ETSALEATNVE+AF T+LTEIY ++++K+L A+
Sbjct: 131 KCDLVNQRDVPTEDAKEFAEKEGLFFLETSALEATNVESAFTTVLTEIYNIVNKKSLAAD 190

Query: 189 EETDSGGSTSLLKGTKLVVPG--QEPQPARSGCCRS 223
           E   +G S S L G K+++PG  QE    R+ CC++
Sbjct: 191 ESQGNGNSAS-LSGQKIIIPGPAQEIPAKRNMCCQA 225

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BLAST of Lcy02g004260 vs. ExPASy Swiss-Prot
Match: Q40522 (Ras-related protein Rab11D OS=Nicotiana tabacum OX=4097 GN=RAB11D PE=2 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 3.5e-83
Identity = 156/223 (69.96%), Postives = 187/223 (83.86%), Query Frame = 0


Query: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNDFSLDSKATIGVEFQTKTLVID 60
           M++   + +QKIDYVFKVVLIGDSAVGKSQ+L+RFARN+FSLDSKATIGVEFQT+TL I 
Sbjct: 1   MASGYGDASQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLAIQ 60

Query: 61  QKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKN 120
            K++KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQ+FDHI RWLEELR HAD+N
Sbjct: 61  HKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRN 120

Query: 121 IVIMLIGNKSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180
           IVIMLIGNK+DL   R VPTEDAKEFAQ E LFF+ETSA+EATN+E AF T+LTEI+ ++
Sbjct: 121 IVIMLIGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATNLEDAFLTVLTEIFNIV 180

Query: 181 SRKALIANEETDSGGSTSLLKGTKLVVPGQ-EPQPARSGCCRS 223
           ++K L A ++  S G+ + L G K++VPG  +  P +  CC S
Sbjct: 181 NKKNLAA-DDNQSNGNPASLTGKKILVPGPGQVIPEKKACCSS 222

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BLAST of Lcy02g004260 vs. ExPASy TrEMBL
Match: A0A6J1KGX4 (ras-related protein RABA4c-like OS=Cucurbita maxima OX=3661 GN=LOC111493112 PE=4 SV=1)

HSP 1 Score: 415.6 bits (1067), Expect = 1.3e-112
Identity = 212/222 (95.50%), Postives = 216/222 (97.30%), Query Frame = 0


Query: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNDFSLDSKATIGVEFQTKTLVID 60
           MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRF RN+FSLDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVID 60

Query: 61  QKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKN 120
           QK IKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQ+FDHI RWLEELR HADKN
Sbjct: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHITRWLEELRAHADKN 120

Query: 121 IVIMLIGNKSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180
           IVIMLIGNKSDL SLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI
Sbjct: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180

Query: 181 SRKALIANEETDSGGSTSLLKGTKLVVPGQEPQPARSGCCRS 223
           SRKALIANEETDSGGS+SLLKGTK+VVPGQEPQPA SGCCRS
Sbjct: 181 SRKALIANEETDSGGSSSLLKGTKIVVPGQEPQPATSGCCRS 222

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BLAST of Lcy02g004260 vs. ExPASy TrEMBL
Match: A0A1S3CFD0 (ras-related protein RABA4c isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500306 PE=4 SV=1)

HSP 1 Score: 413.7 bits (1062), Expect = 4.9e-112
Identity = 211/222 (95.05%), Postives = 217/222 (97.75%), Query Frame = 0


Query: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNDFSLDSKATIGVEFQTKTLVID 60
           MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARN+FSLDSKATIGVEFQTKTL ID
Sbjct: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNID 60

Query: 61  QKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKN 120
           QK IKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKN
Sbjct: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKN 120

Query: 121 IVIMLIGNKSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180
           IVIMLIGNKSDL SLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI
Sbjct: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180

Query: 181 SRKALIANEETDSGGSTSLLKGTKLVVPGQEPQPARSGCCRS 223
           S+KAL+AN+ETDSGGS+SLLKGTK+VVPGQEPQ A SGCCRS
Sbjct: 181 SKKALVANDETDSGGSSSLLKGTKIVVPGQEPQAASSGCCRS 222

[Close]

BLAST of Lcy02g004260 vs. ExPASy TrEMBL
Match: A0A6J1GBR1 (ras-related protein RABA4c-like OS=Cucurbita moschata OX=3662 GN=LOC111452722 PE=4 SV=1)

HSP 1 Score: 412.9 bits (1060), Expect = 8.4e-112
Identity = 211/222 (95.05%), Postives = 216/222 (97.30%), Query Frame = 0


Query: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNDFSLDSKATIGVEFQTKTLVID 60
           MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRF RN+FSLDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVID 60

Query: 61  QKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKN 120
           QK IKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQ+FDHIARWLEELR HADKN
Sbjct: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRAHADKN 120

Query: 121 IVIMLIGNKSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180
           IVIMLIGNKSDL SLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI
Sbjct: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180

Query: 181 SRKALIANEETDSGGSTSLLKGTKLVVPGQEPQPARSGCCRS 223
           SRKALIANEETDSGG++SLLKGTK+VVPGQEPQ A SGCCRS
Sbjct: 181 SRKALIANEETDSGGNSSLLKGTKIVVPGQEPQSATSGCCRS 222

[Close]

BLAST of Lcy02g004260 vs. ExPASy TrEMBL
Match: A0A0A0LEW7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G698470 PE=4 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 7.1e-111
Identity = 210/222 (94.59%), Postives = 216/222 (97.30%), Query Frame = 0


Query: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNDFSLDSKATIGVEFQTKTLVID 60
           MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARN+FSLDSKATIGVEFQTKTL ID
Sbjct: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNID 60

Query: 61  QKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKN 120
           QK IKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQ+FDHIARWLEELRGHADKN
Sbjct: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRGHADKN 120

Query: 121 IVIMLIGNKSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180
           IVIMLIGNKSDL SLRVVPTEDAKEFAQMENL FMETSALEATNVEAAFNTILTEIYRVI
Sbjct: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLSFMETSALEATNVEAAFNTILTEIYRVI 180

Query: 181 SRKALIANEETDSGGSTSLLKGTKLVVPGQEPQPARSGCCRS 223
           S+KALIAN+ETDSGGS+SLLKGTK+VVPGQEPQ A SGCCRS
Sbjct: 181 SKKALIANDETDSGGSSSLLKGTKIVVPGQEPQAASSGCCRS 222

[Close]

BLAST of Lcy02g004260 vs. ExPASy TrEMBL
Match: A0A6J1DGV8 (ras-related protein RABA4d-like OS=Momordica charantia OX=3673 GN=LOC111020375 PE=4 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 3.3e-108
Identity = 202/222 (90.99%), Postives = 214/222 (96.40%), Query Frame = 0


Query: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNDFSLDSKATIGVEFQTKTLVID 60
           MSNL SNFNQKIDYVFKVVLIGDSAVGKSQLL+RF+RN+FSLDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLNSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSLDSKATIGVEFQTKTLVID 60

Query: 61  QKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKN 120
           QKTIKAQIWDTAGQERYRAVTSAYYRGAVGAML+YDMTKRQSFDHIARWLEELRGHADKN
Sbjct: 61  QKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKRQSFDHIARWLEELRGHADKN 120

Query: 121 IVIMLIGNKSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180
           IVIMLIGNKSDL SLRVVPT+DA+EFAQMENLFFMETSALEATNVE AFNTILTEIY+VI
Sbjct: 121 IVIMLIGNKSDLGSLRVVPTDDAREFAQMENLFFMETSALEATNVETAFNTILTEIYQVI 180

Query: 181 SRKALIANEETDSGGSTSLLKGTKLVVPGQEPQPARSGCCRS 223
           SRKAL+ANE+ DSGG++SLLKGTK+VVPGQE   A SGCCRS
Sbjct: 181 SRKALVANEDADSGGNSSLLKGTKIVVPGQERSAASSGCCRS 222

[Close]

BLAST of Lcy02g004260 vs. NCBI nr
Match: XP_022998498.1 (ras-related protein RABA4c-like [Cucurbita maxima])

HSP 1 Score: 415.6 bits (1067), Expect = 2.7e-112
Identity = 212/222 (95.50%), Postives = 216/222 (97.30%), Query Frame = 0


Query: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNDFSLDSKATIGVEFQTKTLVID 60
           MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRF RN+FSLDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVID 60

Query: 61  QKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKN 120
           QK IKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQ+FDHI RWLEELR HADKN
Sbjct: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHITRWLEELRAHADKN 120

Query: 121 IVIMLIGNKSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180
           IVIMLIGNKSDL SLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI
Sbjct: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180

Query: 181 SRKALIANEETDSGGSTSLLKGTKLVVPGQEPQPARSGCCRS 223
           SRKALIANEETDSGGS+SLLKGTK+VVPGQEPQPA SGCCRS
Sbjct: 181 SRKALIANEETDSGGSSSLLKGTKIVVPGQEPQPATSGCCRS 222

[Close]

BLAST of Lcy02g004260 vs. NCBI nr
Match: XP_008461787.1 (PREDICTED: ras-related protein RABA4c isoform X1 [Cucumis melo])

HSP 1 Score: 413.7 bits (1062), Expect = 1.0e-111
Identity = 211/222 (95.05%), Postives = 217/222 (97.75%), Query Frame = 0


Query: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNDFSLDSKATIGVEFQTKTLVID 60
           MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARN+FSLDSKATIGVEFQTKTL ID
Sbjct: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNID 60

Query: 61  QKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKN 120
           QK IKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKN
Sbjct: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKN 120

Query: 121 IVIMLIGNKSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180
           IVIMLIGNKSDL SLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI
Sbjct: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180

Query: 181 SRKALIANEETDSGGSTSLLKGTKLVVPGQEPQPARSGCCRS 223
           S+KAL+AN+ETDSGGS+SLLKGTK+VVPGQEPQ A SGCCRS
Sbjct: 181 SKKALVANDETDSGGSSSLLKGTKIVVPGQEPQAASSGCCRS 222

[Close]

BLAST of Lcy02g004260 vs. NCBI nr
Match: XP_023525670.1 (ras-related protein RABA4c-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 412.9 bits (1060), Expect = 1.7e-111
Identity = 211/222 (95.05%), Postives = 216/222 (97.30%), Query Frame = 0


Query: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNDFSLDSKATIGVEFQTKTLVID 60
           MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRF RN+FSLDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVID 60

Query: 61  QKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKN 120
           QK IKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQ+FDHIARWLEELR HADKN
Sbjct: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRAHADKN 120

Query: 121 IVIMLIGNKSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180
           IVIMLIGNKSDL SLRVVPTEDAKEF+QMENLFFMETSALEATNVEAAFNTILTEIYRVI
Sbjct: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFSQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180

Query: 181 SRKALIANEETDSGGSTSLLKGTKLVVPGQEPQPARSGCCRS 223
           SRKALIANEETDSGGS+SLLKGTK+VVPGQEPQ A SGCCRS
Sbjct: 181 SRKALIANEETDSGGSSSLLKGTKIVVPGQEPQSATSGCCRS 222

[Close]

BLAST of Lcy02g004260 vs. NCBI nr
Match: XP_022949337.1 (ras-related protein RABA4c-like [Cucurbita moschata] >KAG6606869.1 Ras-related protein RABA4c, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036575.1 Ras-related protein RABA4c [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 412.9 bits (1060), Expect = 1.7e-111
Identity = 211/222 (95.05%), Postives = 216/222 (97.30%), Query Frame = 0


Query: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNDFSLDSKATIGVEFQTKTLVID 60
           MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRF RN+FSLDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVID 60

Query: 61  QKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKN 120
           QK IKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQ+FDHIARWLEELR HADKN
Sbjct: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRAHADKN 120

Query: 121 IVIMLIGNKSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180
           IVIMLIGNKSDL SLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI
Sbjct: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180

Query: 181 SRKALIANEETDSGGSTSLLKGTKLVVPGQEPQPARSGCCRS 223
           SRKALIANEETDSGG++SLLKGTK+VVPGQEPQ A SGCCRS
Sbjct: 181 SRKALIANEETDSGGNSSLLKGTKIVVPGQEPQSATSGCCRS 222

[Close]

BLAST of Lcy02g004260 vs. NCBI nr
Match: XP_004149604.1 (ras-related protein RABA4c isoform X1 [Cucumis sativus] >KGN58606.1 hypothetical protein Csa_002054 [Cucumis sativus])

HSP 1 Score: 409.8 bits (1052), Expect = 1.5e-110
Identity = 210/222 (94.59%), Postives = 216/222 (97.30%), Query Frame = 0


Query: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNDFSLDSKATIGVEFQTKTLVID 60
           MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARN+FSLDSKATIGVEFQTKTL ID
Sbjct: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNID 60

Query: 61  QKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKN 120
           QK IKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQ+FDHIARWLEELRGHADKN
Sbjct: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRGHADKN 120

Query: 121 IVIMLIGNKSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180
           IVIMLIGNKSDL SLRVVPTEDAKEFAQMENL FMETSALEATNVEAAFNTILTEIYRVI
Sbjct: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLSFMETSALEATNVEAAFNTILTEIYRVI 180

Query: 181 SRKALIANEETDSGGSTSLLKGTKLVVPGQEPQPARSGCCRS 223
           S+KALIAN+ETDSGGS+SLLKGTK+VVPGQEPQ A SGCCRS
Sbjct: 181 SKKALIANDETDSGGSSSLLKGTKIVVPGQEPQAASSGCCRS 222

[Close]

BLAST of Lcy02g004260 vs. TAIR 10
Match: AT5G47960.1 (RAB GTPase homolog A4C )

HSP 1 Score: 360.5 bits (924), Expect = 9.5e-100
Identity = 177/220 (80.45%), Postives = 202/220 (91.82%), Query Frame = 0


Query: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNDFSLDSKATIGVEFQTKTLVID 60
           MS  QSNFNQKIDYVFKVVLIGDSAVGKSQLL+RF+RN+FS++SKATIGVEFQT+TL ID
Sbjct: 1   MSKFQSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEID 60

Query: 61  QKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKN 120
           +KTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQSFDH+ARWLEELRGHADKN
Sbjct: 61  RKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKN 120

Query: 121 IVIMLIGNKSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180
           IVIMLIGNK+DL +LR VPTEDAKEFAQ ENLFFMETSAL++ NVE +F T+LTEIYR++
Sbjct: 121 IVIMLIGNKTDLGTLRAVPTEDAKEFAQRENLFFMETSALDSNNVEPSFLTVLTEIYRIV 180

Query: 181 SRKALIANEETDSGGSTSLLKGTKLVVPGQEPQPARSGCC 221
           S+K L+ANEE +SGG +SLL+GTK+VV G+E +    GCC
Sbjct: 181 SKKNLVANEEGESGGDSSLLQGTKIVVAGEETESKGKGCC 220

[Close]

BLAST of Lcy02g004260 vs. TAIR 10
Match: AT3G12160.1 (RAB GTPase homolog A4D )

HSP 1 Score: 356.7 bits (914), Expect = 1.4e-98
Identity = 177/220 (80.45%), Postives = 202/220 (91.82%), Query Frame = 0


Query: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNDFSLDSKATIGVEFQTKTLVID 60
           MSNL  ++NQKIDYVFKVVLIGDSAVGK+QLL+RFARN+FS+DSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKN 120
            KT+KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDH+A+WLEELRGHADKN
Sbjct: 61  NKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKN 120

Query: 121 IVIMLIGNKSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180
           IVIMLIGNK DL SLR VPTEDA+EFAQ ENLFFMETSALEATNVE AF TILTEIYR+I
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRII 180

Query: 181 SRKALIANEETDSGGSTSLLKGTKLVVPGQEPQPARSGCC 221
           S+K+L A+++ D+ G++SLLKGT++++P ++    R GCC
Sbjct: 181 SKKSLTADDD-DADGNSSLLKGTRIIIPSEQESGKRGGCC 219

[Close]

BLAST of Lcy02g004260 vs. TAIR 10
Match: AT5G65270.1 (RAB GTPase homolog A4A )

HSP 1 Score: 303.9 bits (777), Expect = 1.1e-82
Identity = 153/217 (70.51%), Postives = 185/217 (85.25%), Query Frame = 0


Query: 9   NQKIDYVFKVVLIGDSAVGKSQLLSRFARNDFSLDSKATIGVEFQTKTLVIDQKTIKAQI 68
           +QKIDYVFKVVLIGDSAVGKSQ+L+R+AR++FSLDSKATIGVEFQT+TLVID K++KAQI
Sbjct: 11  SQKIDYVFKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHKSVKAQI 70

Query: 69  WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKNIVIMLIGN 128
           WDTAGQERYRAVTSAYYRGAVGAMLVYD+T+RQ+FDHI RWLEELR HADKNIVI+LIGN
Sbjct: 71  WDTAGQERYRAVTSAYYRGAVGAMLVYDITRRQTFDHIPRWLEELRAHADKNIVIILIGN 130

Query: 129 KSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIAN 188
           KSDL   R +PTEDAKEFA+ E LFF+ETSA  ATNVE+AF+T+LTEI+ ++++K+L A+
Sbjct: 131 KSDLVDQRAIPTEDAKEFAEKEGLFFLETSAFNATNVESAFSTVLTEIFNIVNKKSLAAS 190

Query: 189 EETDSGGSTSLLKGTKLVV---PGQEPQPARSGCCRS 223
           E+ ++G   S L G K+ +   PGQ      + CC S
Sbjct: 191 EDQENGNPGS-LAGKKIDIVPGPGQVIPNKSNMCCNS 226

[Close]

BLAST of Lcy02g004260 vs. TAIR 10
Match: AT4G39990.1 (RAB GTPase homolog A4B )

HSP 1 Score: 302.4 bits (773), Expect = 3.1e-82
Identity = 153/214 (71.50%), Postives = 182/214 (85.05%), Query Frame = 0


Query: 11  KIDYVFKVVLIGDSAVGKSQLLSRFARNDFSLDSKATIGVEFQTKTLVIDQKTIKAQIWD 70
           K+DYVFKVVLIGDSAVGKSQLL+RFAR++FS+DSKATIGVEFQT+TL I+QK+IKAQIWD
Sbjct: 13  KVDYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQIWD 72

Query: 71  TAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKNIVIMLIGNKS 130
           TAGQERYRAVTSAYYRGAVGAMLVYDMTKR++F+HI RWLEELR HADKNIVI+LIGNKS
Sbjct: 73  TAGQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVIILIGNKS 132

Query: 131 DLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEE 190
           DL   R VPTEDAKEFA+ E LFF+ETSAL ATNVE +FNT++T+IY  +++K L +  +
Sbjct: 133 DLEDQRAVPTEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTQIYNTVNKKNLASEGD 192

Query: 191 TDSGGSTSLLKGTKLVVP--GQEPQPARSGCCRS 223
           +++ GS   L G K+++P  GQE     S CC S
Sbjct: 193 SNNPGS---LAGKKILIPGSGQEIPAKTSTCCTS 223

[Close]

BLAST of Lcy02g004260 vs. TAIR 10
Match: AT1G16920.1 (RAB GTPase homolog A1B )

HSP 1 Score: 266.9 bits (681), Expect = 1.4e-71
Identity = 131/208 (62.98%), Postives = 165/208 (79.33%), Query Frame = 0


Query: 13  DYVFKVVLIGDSAVGKSQLLSRFARNDFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTA 72
           DY+FKVVLIGDS VGKS LLSRF +N+F+L+SK+TIGVEF T+TL +D K +KAQIWDTA
Sbjct: 11  DYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVVKAQIWDTA 70

Query: 73  GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKNIVIMLIGNKSDL 132
           GQERYRA+TSAYYRGAVGA+LVYD+T+R +F+++ RWL+EL+ H D NIV+ML+GNKSDL
Sbjct: 71  GQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVGNKSDL 130

Query: 133 RSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETD 192
           R L  VPTED K +A+ E+L FMETSALEATNVE AF  +LT+IYR+ S+K + A E+  
Sbjct: 131 RHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSKKQVEAGED-- 190

Query: 193 SGGSTSLLKGTKLVVPGQEPQPARSGCC 221
             G+ S+ KG K+ V        + GCC
Sbjct: 191 --GNASVPKGEKIEVKNDVSALKKLGCC 214

The following BLAST results are available for this feature:

BLAST of Lcy02g004260 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FE79	1.3e-98	80.45	Ras-related protein RABA4c OS=Arabidopsis thaliana OX=3702 GN=RABA4C PE=2 SV=1	[more]
P25766	2.3e-98	83.64	Ras-related protein RGP1 OS=Oryza sativa subsp. japonica OX=39947 GN=RGP1 PE=2 S...	[more]
Q9LH50	1.9e-97	80.45	Ras-related protein RABA4d OS=Arabidopsis thaliana OX=3702 GN=RABA4D PE=1 SV=1	[more]
Q40191	4.4e-86	74.54	Ras-related protein Rab11A OS=Lotus japonicus OX=34305 GN=RAB11A PE=2 SV=1	[more]
Q40522	3.5e-83	69.96	Ras-related protein Rab11D OS=Nicotiana tabacum OX=4097 GN=RAB11D PE=2 SV=1	[more]

BLAST of Lcy02g004260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KGX4	1.3e-112	95.50	ras-related protein RABA4c-like OS=Cucurbita maxima OX=3661 GN=LOC111493112 PE=4...	[more]
A0A1S3CFD0	4.9e-112	95.05	ras-related protein RABA4c isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500306 PE...	[more]
A0A6J1GBR1	8.4e-112	95.05	ras-related protein RABA4c-like OS=Cucurbita moschata OX=3662 GN=LOC111452722 PE...	[more]
A0A0A0LEW7	7.1e-111	94.59	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G698470 PE=4 SV=1	[more]
A0A6J1DGV8	3.3e-108	90.99	ras-related protein RABA4d-like OS=Momordica charantia OX=3673 GN=LOC111020375 P...	[more]

BLAST of Lcy02g004260 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022998498.1	2.7e-112	95.50	ras-related protein RABA4c-like [Cucurbita maxima]	[more]
XP_008461787.1	1.0e-111	95.05	PREDICTED: ras-related protein RABA4c isoform X1 [Cucumis melo]	[more]
XP_023525670.1	1.7e-111	95.05	ras-related protein RABA4c-like [Cucurbita pepo subsp. pepo]	[more]
XP_022949337.1	1.7e-111	95.05	ras-related protein RABA4c-like [Cucurbita moschata] >KAG6606869.1 Ras-related p...	[more]
XP_004149604.1	1.5e-110	94.59	ras-related protein RABA4c isoform X1 [Cucumis sativus] >KGN58606.1 hypothetical...	[more]

BLAST of Lcy02g004260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G47960.1	9.5e-100	80.45	RAB GTPase homolog A4C	[more]
AT3G12160.1	1.4e-98	80.45	RAB GTPase homolog A4D	[more]
AT5G65270.1	1.1e-82	70.51	RAB GTPase homolog A4A	[more]
AT4G39990.1	3.1e-82	71.50	RAB GTPase homolog A4B	[more]
AT1G16920.1	1.4e-71	62.98	RAB GTPase homolog A1B	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 119..132 score: 51.17 coord: 39..55 score: 33.78 coord: 16..37 score: 52.33 coord: 57..79 score: 53.71 coord: 154..176 score: 43.38
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 16..179 e-value: 2.1E-104 score: 362.8
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 13..179 e-value: 7.1E-27 score: 105.3
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 21..215 e-value: 5.1E-5 score: 22.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 192..222
None	No IPR available	PANTHER	PTHR47978:SF13	RAS-RELATED PROTEIN RABA4C	coord: 1..221
None	No IPR available	PANTHER	PTHR47978	FAMILY NOT NAMED	coord: 1..221
None	No IPR available	PROSITE	PS51420	RHO	coord: 9..184 score: 9.038805
None	No IPR available	PROSITE	PS51419	RAB	coord: 11..220 score: 35.068577
None	No IPR available	CDD	cd01868	Rab11_like	coord: 13..177 e-value: 1.94851E-126 score: 352.248
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 18..175 e-value: 4.2E-11 score: 22.7
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 17..177 e-value: 8.5E-61 score: 204.3
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 10..222 score: 16.468746
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 15..172 e-value: 8.4E-37 score: 124.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 8..220 e-value: 5.1E-70 score: 236.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 11..182

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy02g004260.1	Lcy02g004260.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005768	endosome
cellular_component	GO:0005794	Golgi apparatus
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding