Lcy02g004210 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy02g004210
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	nucleolin 1-like isoform X1
Location	Chr02: 5563317 .. 5574142 (-)
RNA-Seq Expression	Lcy02g004210
Synteny	Lcy02g004210

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCATCTCAAATCTCTCTCCCTCAGCCATGTGCTTTGATGAAATTCGCGCTCCGTTGCTTTTCTGCGTTTAATTTCCAGCCTCTTCCCCGTTAATCGCTTCTCTCCGTCGAGTTTCACAGAAGTCGGTGGACCCGGCTAGGGTTCATGGAAGCTGCAATTCCGGAGCTCAATATTTGAGGGTTTGAATATACCAATTGAACTCCGGTTTTAGTGTTGAGAGTGAGCGTTCGCTGTTCTGGATTGTGGAGCTCCGTGAAAAAACGCGTCGGATATGGGGAGTGAGGATCGTGTCGATGATCGGACGTTCAAGATTGATTTCAGTGGCGACGGAATGGCGAAGCTCAGAGAGAGGATAAAGCTGAAGATGAAGGAATTCATGGGCGATTATACTGATGACACTCTCGTGGTACGGACTAGCCTAGCCTTTTAACATTCATGTGCCTGAGAGCTTTTTGCCAAGCAATGAGATTATCGGTTTTGTGACGAGTCTGCCTGGGAGTTTTTAGAAATTCTTTTAGGTTATTCATGTGGAGGCCATTTTCTTCTTCTTAATAGGTTGTTGAGGAATATGTTTGGTTGAAGAAATGGAAATGTAGCAATCGCCGGTTGTTATATATTTGCTAATGCGGAATGAAAGAAAAAAAAATAGTTCTGATTCTTTATCTTTGAATAATGAAGTGCCTGGGGTGAATTTTCTCCCATTTACTAAGAAATTCGTGAAGCGTAGATGGTTGATATAATAAGATGTATTCAAACTCAATGCCATATATTATTCTTCGTCCAAAGCAGACTGCATCTTCTAATGTGATTTGCAATAGCCTGTTTAAGAATTTGGTTAGCCGTCATCCTGTTTAACTGTCGCCCCTCTTTGAAAGAATCTCTCTGAGCTAGGTGAACTTGTTACCGTGTTTATTCGTTCGGTTTTTGATGGTTGGCTGTTTCCATTTTTCCTTGATAAGCAATAAGTACATTGATTTAATGAAATGTAAGAAAAGAAGAATCTAATTAGCATGAAAGAAATACTTGAAGTTACAGAATAGGCTATAAGTATTACTCCCAAATGTGATGATTAAATGAACGTTCTCCTAAAATAACTTAGAAGAGTTGGCAATAATCTTGTAGAAGCAAGAGGTTGAGATTAAGCTAATTGGACGGAAATCTATTGGAGTCTTTGCATTAGGTTTCTTTGTTGAGGGATGCATTAAGAATATTATTCTGAAAAAAGATCTTGGAATACTTGTAATGTCTTCCTTGAGGGTGTTTCAAGAGTTCTAAGTGGTGAATCCATCACGTTTTTGAGCTTTTTTACTCCCCAAATTTGAGACACCTTGAATAATTTTGTTTACCCTAAAATTAGCCTCTATCTAAAGCAATCATTGGGGACTCTAAGGTTGACATCCAATCTAAACTGGTTGGGATAAATTTTACCACCTTTTTCTTTGAGTATGGATCTGGGAGATAGCAAGAAATTCTTTTTCAATGTGTGTGGAAAGGTCTAGTGTTATGATCTCCTTCTCCTCTTGATACATCTTCTCCTGCGAGATATGTGGATTTGTATCTTCACATTCAAATAATTATCTTTCCAAATTAGATCTTTGAGTTGGGATCTGAGATTTATTATAGAAGATCATTTGGTTGCATCAAGTAGGGAAAAAGTATTGCTAGTGGTCTAGAGCTTTGGGGTCAACAAGAATTTCAGCTTTTCTGAAGGTTCCATCTTTTCAGTGAGCGTTTTGTCTTCTTTAATCTGCAAATAGAAACCATACCTTAGGCAACCCTCGAGATTAGAGTAGAATCCCACCAACTTTTTGAGGTCTTCGAGAAATTGTTGTGCTTGAGCCACATTTACCAGAAGATTCTAGAAGGGTCATTTAACTGTCCGAGGTATGTCTTTCAAGGTGTTTAACTCTAGAATTGGAAATTTAAAGGAGCCAATCATGGGAGACTAGAAATTTGTCAATGAGGGACAAAACAAGCTATCTTGGATCAAGTTAACTTGGCACTGTCACGAGGGATATCAATGGAGGAGAGGTTGTCAAGAACCCCATCAAAGAGCTTCATGCTCTTGGTGGGGATTTTGGAGGTGAATTTCTCTCTACTCCATTTAGAGATATTGGAGTCTTCCTATTCCATTAGTCATGACAGAGGCACCCGAGATTTTCCAATTTTCTAAAAAAGAAACCTAGATATGGACATCTTGAGAGGGATCATAAATATTAAAGAGCCTAACTCCTAAGAAGAAGAAAAATTTGCAAAAGGAAACTTGATGCTTTAAGAGACAGGTGGTAGCCATAACAAAGGCACCCAAGATTTTCCAATTCCTTCCAGAAAAAGAAATAACTTGAAATAGACATCTTGCGAGGATCCATAAATATTGAAAAGCCAAAAAACAATAAGTTATTCCAGATCCACACTAAAAAAAATAAAATCTTTATATGGACATCATGAGTAGGCTAGTGTCTTTAGGAGTTGCTAAGGGTCAGGTAGAGGGTTTGAAGGTGAGGAAGGAGTTAATCTGGTTATCTCATCTTCAATTTGCTAATGACACCATTTTTTCTATTTGGTCAAGAAAGGTCCTTGTTAATCTTAATGGTATTTTGTCCTTTTTCGAAACTATTTCAATCCTTAAGATTAATAGGGGTAAAATTTCCATCATAGGCTTAAACCGTGACCCTGTGAAGTTGAATTCGTGGGCTTCCTTGGTGGGTTGTGTGGTGAATAATCTTCCTTGCTCTTATCTTGGGCTCCCTTTGGGTGGTAACTTGAAGTATTCGTCCTTTTGGAGCCTTGTGGCGGAAAAGGTTTAGAAGCATTTGGGTTCCTTGGAAAAGGGTTTTCAATGCTAAGGAGGAAGACTGACACTTATCCAATTAGTCCTAAGCGATATCCTAAGTTATTTCTTATCTTTGTTTAGGATGTCAATTGTACCGAGCAAGACTTGTAAGAAAATGATAAAGGGATTTTTTGTGGAAGGGGTTGAGGAGGGGGAGGCTTCCATCTGGTAAGGTAGGATGTGGTTTCAAAACCTTTGGCCATAGCAGGGTTAGGTATAGCCGTATAGGAAACCTAAGGTCGTTGGATGGGGCTTTACTAGCAAATTTGTTATGGCCGTTCTTCTTAGAGCCTAATGCTCCATGGCACAGGATTATTGTGAGTAGGTATGATCCTTATCCCTTGGTGTGGGTCGTAGTTTTTTAAGGGTTCTAGTAAAAAACTTTTTATTTTTATTTTTATTTTTTTTTTTATTTTTTTTTATTGAGATTTCTATCGGTTTTCCTTCTTTTTTCCCGTTTTTAAAATGTACCTTTGAGAAAGGCTCAAAGGTTTACTTTTAGGAGGATTGGTGGGTTGGGGAATCTTCCTTTTGTACTTTATTTCCTCACTTCTATCACCTTTCGATAAGAAGTTCCATTCGGTGACTTATGTTTAGCCTTCTTCAGATCGGATTAATACTTGGGACTGTATTCAAAGAGGATCTCCTTCTATGTTAGGTATGTAGTGATGCATTCTTTGCTAGAGGCACAAGGAGGGTATTGACCACTTGTTGTGGGGGTGTGAATTTGCTCATGCTTTGTGAGCAAATGCTTGAGTTTGTTCGAATTATGTTTGACTTGAGGCAGGGTTTTGCGGTTTTATGATTGAGGAGATGTTCCTTAATCTCCTAGAGACTTGTTTCTTTGTTGTGTTACGAGGAATTTGGCATGAGAGAAATAATAGAATTTTTAAGGAGGTAAGAGATTGTGGGAGGAGGTTTGGGGGTAGTTAGGTTTAATGCGTCCTTGGTTTGTTGCTCAGCCTTTTTGTGATTATGAGCTTGGTTTGATTCTTTTGGATTGAGTCCTTTTCTGTAGTTAGTAGATGGACTCCTTTTGGTGGGCTTGTTTTTGTATGCCCTCGTATATTCTTTCATTTTCCTCAATGAAGGCTCAGTTTCTTACCCTCCAAAAAAGGAATGTTCTTGCAACATACATTCCTGGGTAAGCCACATGAGCCCTTTTTAATTTTCTAAGTTCTTTCTTTTCTTAGTTGATCGAAGACTTAATGTTTGGAATCTCTCTATCTAGTTCTTTGCTCTTCTTCTTCACACGTTTCTTTTTCTTCAGTGTGGAGGGAATAGGAAAGGTAAGAAGGTGGAGTTTTCAATGGCCCTAAAGCCAAATTGTTGTTGTGAAGAAAGCCATGGGTCATCACTCTATTAGAACAGACTGGGAAGGTCGAGAAGAAACTGCTTCATGTACAACTTCAACATCGAAGAGGTTTTTGGTGGGGGGTGGGGGGGGGGGAATAAAAGGTTGCCAACACAAGTCTGGAAGGGTTGCAACGTCTCCTCTTTCAAATAAGGGTAGAACAAGTTGGGTGGGGGAGGTAGGCAATTGCTAAATGGTGAATGGATGTTTTTTCTCAAAAAAAAGTTGAGAGGATCGGGTATTTCAAAGAGAAGGCCGGATGCTTTGCTTTCTCATCCAAAAAAAACTTTTCAATATTCCAAGGGATGTATAGTCTCATCAAGTAGGGGTACTATTTTCATATTTTTCTTCTGTTAGGTCATGATATGATGGAACCTAGAAGGCTAAAAAAATAAGTATGAATTGCATGTTAGGAGTGTTGATTAAGGACCAATACTTGAGAGGATTCAAAATCAATGGTTGCGACTCTAGATATAACCATGGACTCTAGCGACTTTTCTTCACCAAAGACTTAGTACCATACAAAGGGCAACATGAACAACATTTTGATCACAGATAGAGATGTGATTTAACTTTTATGAAAGCTTCCATGAGATCCAATTTCTGAAGTTTTAGTGGCAGAATTGAGAAATCCTCCACACAATGAAAATGCCTACGGAAGAATCAAGATTCCATTTTGTTCAGGGGCACATTTATAATCTTTATCCATTCTTCATATGAGAGGGATGACCAATCTTGGAATGCTCGAGGGAGTCCAGCCTTCTCATTGGGAGAGAAGTCTTAGCTTGGTCCATTCTTTTGCATTTGAGCATGGCCTTATTAACTTGGACATGGTTTGGGCTATTTAGCTTTTGGAAAGTTGTGAGGGTTCGGTTCTTGTTGTTCATAAGAGTTTTCTTTAAATCATACTGGGGACATTCATCACCAACGTGATCTTAGCTTAATTGGTTAAGGTATATACTCTTAACCAAGAGGTCATAGGTTTGAATTCTCCCCCTCAATGTTGGATTAAAAAAATGGAGACATTCATCTTGATAAAGAAGATGCCATCTTTAATAGGGTGTTAACCATAACCACTGTGGGTTGACCTAGTGGTGAAGAAGGGCCAGGTAAATGATAAAGGAAGGACTTAGAGGGAATGAGTTTAAGTCATGATGGTCACCTACCTAAAATTTAATATCCTATGAGTTACCTTGGCAACTATATGTAGTAGGATAAGACGATTAGAATAGTCGAGATGCACGTAAGTTAGTCCAGACACTCACAGATATTAAAAAAAAAAAAAAAATTAACCATGTTTTAGTAATCTTGCTACCAAGAATTTTTTCAATCTTTTTTTCCTTTTTTTTCTTTGGGAATCTTAGAGGCTTTTACTTGCAGTGTAGTGCACTTTTGGGTGACCTTAAATAGAAAATGTTATTTAAAATAATTGATTTTGATGGGCTCCAGTAGGAGTTAGATATCATTTACTTCAGGTACCTTTGAGGGCTTCATAGGTTTCCGGATTCTGTGAATAGGAAAGTAAGTGGAAAACTAGTTTATATATAATATATCAGAATGCTTGAAAATTTATTATTGAGATGCTGGGATTTATTTAAGTGATGTGAAATTGTTTAGCCTTTGAATGTCCTCTTTTTTTCTCAAGTGGTAAGGCATGAGAGTGTGGAAACTTTCTTTTATAGAGGGGGTGGAAAAGGAGGAAGCCCGACAATTGTTTAGTAAGCCACCTCAAGAGGGGAGGTTCCAGGTACCTTGAATAGTTTGGAGAGTTGTATTGTAATTCCATTATCTTTTACATTACAATATAGCTGGGTTCTATCAATTGGTATCAGATTAGTTCGGTTTTGGCCATGGGGTTCGATGTAAATTTATGTGAAGAGTTGTTGTTGTCTTTGCCTGAAGAGCTGTTTTTTATTTAATTCAGCGTTATACTTGTGTATCTTTCATAGGCATGTTTGTGCATTTGCTTAAATTGCCTCCCTGTTTCATTTTTTTCATATTCATCATAATGTGGTTTCGAATTTACTTCAATAACTGGGATTTAGAGCCTCTGTTTGAATAGATGAAGTCTTATTAAATTTAATGAATGTTTTTTGGGTAGGAATACGTGATTGTCTTGTTGAGGAACGGCAGGCGCAAAGAAGAAGCACAGAATGAACTAAATGTATTTTTGGCAGATGATAGCCATTCTTTTGTATCTTGGTAATTTGATTCTCATCCTTCCTCGTGTTCATATTTGTAACTTGGGTAGTTTCTTGCATTGAGTCATCTTGCAGCCAGTTTGACTAATTTTTTTATAAGCTTCATTTCAACAGGCTGTGGGACCATCTGGCTTCAAGTATGGATTTATATGTGGACACGCCTAATAAATCTTCTGCCAGTGAAGTGCCCAGACCGAAATCTCCAGTAGCAGAACCGGATAGAAGAAATGATTCTCGCAATCTGGAGTCTGATTCAGAAAGAGGGAAGTCTGAAAAATTATCTAGCAGGCGGCGTAATAGGGAATGGAAAGGAATTTCTAATGAGGAAACCCGTGTTACTCCAAGATCTGAAGTTAGTCGTGTCAAGCATTCTTCTCCTGAACAAGTTCCTAGTCATAGGAAAAGGAGCCGAGCTGATGATCATCAAGGCACTGAGGTTCGTGATCTGACTTTTCTCTTCTAAATTAGTACCTAGCGACAGTTAGTTGGGCTTTAAAATGTGAAAGTTGAATTAGTGAAAAGCAATGGATGGAGGGTTCGTCGAACCATATCTTGTTATTTCTCAGTTTGCAACCCCACAATTGTATTTTTGTTTAAAACTGCACGTTTTTATGTAACTAAAATTTTAAAGTATCTTAATTAAAAAAAAAAAAGTTCTCAATTATGGTGTCTAAAGACCTATCAACTTGTATGAGCGTGTCTTGTTTTTCTGATTATGTGTAAACTTTAATTTCTTCTCCTTTCCACTGACATATGGCCTATGTCTGTTTAAATTCAGGGTTTTGTTTTTTTCTTTTAATTAATTACTATTATTATTATTTTTTGAAATTTTATGTAATACACAACTATATTGGATTTTGATAATTATTTGATGGGAAGGTAATGATCAGAGCTGCAGTTTAACCTTATTCATACAAATGGATAAACCAGAAACATGAAGTATTGTGCTATGTTGTTTTTTTTTTGTTTTTTCTCTCTCAAGTATTGTGCTATATTTTTGCTCACTGTACTTCCTAAAATGTATTTTAAGACCATGAAGTATGCTTGATTGATTTTTGTGACTTTTTTCTGCAATACTTTGAATGCTCTACTAAACTACCCAAGTTTGATATTTTGAGTCTTTGAAAATAACTTAGTCCAGAATATTGGATAGTTTATTGATGCATTATTCTAATGGGAAACAAATTCTTACGTTTCTTGTTTTACAGAGGGAGGCAGCCTTTCAGGTAAGCATTGCTGCCCCTAGGCGGCTGCTCCAGTTTGCAATGCGAGATGCTGTGGCCACCACAAGGCCCTCTAATGCAGCTAAGGAGCCCCTTTCGAAGCGTCTTCGTTCAGTAGTTTCTACTTCCAATAATGACACGACTAATCGTCCCAAGCGGCTCCAATCTGTCGCAAAAGTGCCAAATCCTATGGCAACTGTTATTAAGGCTGTCACGGAGGCAGCTGAAGATGTGATAAGAGTTAAATCCTCCAGTGTTTTTGACCGACTTGGTCGTCAATCTCGTGATATGGATTTAACAGAGTCCAGTGGCCAACTTGCAGAATATGGAGCAACTGCTGCAGAGGATGATAAATATGGGGATATGAATCATACACAGGATCGACCATACTCAGCAACGTATCTTGAGAGAAGCAATTATAGTGGGAAATATACTCCCGATGAAGCCATGTTTGAAGCTGAAACTGGATTAGCATCAGATTCTACATCTGAAAATGAAGATGTTACTATTCAGGGTCACAGAGTATTTGACAATTCTTGGACTGCAGAATCAGGAGTAAGAAAGGGAGGCAATTTGCGGACCGTGCCATTCAGGGTAGTTGAGAATGCTGATGATGAACGCATGACACATTATAAACAGAAGGATCAACCTTCCTTAGTTGCAAATTCCTCACGTGACATTGTAAATATCTCTGTGAATGTTAATACTTGGAAACCACCTCACTATCAGGGCCCAGGGCAGATTGCTGAACTTGGTGGTCAAAAGTTTTTGCAGGAGAGTGAGTTACAAGGTACCAGATCTGCTGTGCAAGTAATGGAAAATGGCGAGCCAGTCACGATTGTTAACCAACAGAAAAAGCCTGCAGCAAACCTTGAAAAAGAGTTCCAGAAACCTTCTTTATCTGCTAATGGTGGGCTCTCTTTTCTGGTGTCTGGCTCTACTTTCTAAATGATAATTAGTTTGTACGATTTTTTGTTTCTCTTTTTCTTTCTATTTGTGAGGTTTCTCATTCCATTTTTTTATATTTGCTTATCAACAATCAGTTATCATTCCAGGCTTTTACATTATTATTCTCTAGTGGCTATTTCATTCTAAATAATTTTCTCATGTTACCTTATGCAGGCCAATTTGCTGCCACTCGTCCTTTAGAGGATGCTGATGCTCGAACCATTTTTGTTAGCAATGTAATAAGTCACTCTTTTGTTGCTTCTGTGAAGAATTGGTGACTGTTCATCACCTCACATTAATTTTCACGTACAGGTTCACTTTGCTGCTACAAAGGATAGCCTGTCTAGGCATTTTAACAAGTTTGGAGAAGTTGTAAAAGTCATCATTGTAACCGATGCAACCACCGGGCAACCCAAAGGGTAACGCGTTACAATTGTTTATTGTACCTCAGCTATCTCTTTTCTTTACCTCTACTGCAAACGAAAAATTTTCCTACGTCAATTTTTAATAAATTAAGTTATGCGATTGGAGCAGGTCGGCTTATGTGGAGTTCATGAAAAAAGAAGCTGCAGAAAATGCGTTGTCACTGGATGGGACCTCGTTTATGTCTAGGATTCTGAAGGTAGCTGTTCTATTCTAACATTTTGCTTTGTTGTATGAAATGAAGGGAATGAGAATTTCTTAAAGAATAGATTTTACCTAACACATTAATCTTTTTCTGCATGTTCAAATTCACAACCAAACACAATTTCAAATTTTGAATTCAAATTGGAAGTTTTTAAAATGGAAACATTTTCAGATATAGTGAAAATAAGGAATATGTATTTGTTTTTCTTTTTCTTCTCTTCAAGTTCTCTAGTAAGCATTGGTATCTTAAATGAGCCCAATTATATTTGGTTTGGAAGTAGTGTGGGCCAGTTCACAATCTTACATATATCCTGTTGTGGGCCGTGTTTACTGATATTTTCTCTTTTCTTTTTTAACCGGATTGTTATTCAAGTTTATGGTTGCTTTTCACATAATCAGTGAATTTTTATTGGTGTTTCCATGCCTCACTAATTAGAGAGCGAAAGATCAAGAAAGTTCCTGAAAATACTGACATGGAAATGACAGTAGACATCTAGAAGCAAACAGAAAAAATGTACAGGCTCCTTTCAGTTTTGGGCTTCTTTATTTTTGTTTAGCCCTCTTTTGTTCTTTCATTTATCTTAATGAAAGGTTGGTTTCCCATAAAGAAAAATGTTCAAGAATCTTGGCTGCATTTGGTTTTAACTTGTTCTTCCACTGGTATTATAATTGTAACATTTCTATCGTGATGCCAAAACAACCACAAGACACAACTAGCATGATATGTTTTAGTCAAGTAGCTGCATAATGTAGTCAACGAATAAAGCTGCATGTTTGATTGATTTGTCATTGCAGGTCGTAAGGAAAAATGCTTCACAATTAGAAGGTGCTTCAATTGTTACCTGGCCTCGTGCTGTGCGTGGCTCGCCATTTCCTACTCCTAGATTTACCAGAGTTCCTTTCCCCAGGGGCATTCCCGGTGGATTTAGGCCTCGTCCCCCCATCAAACTTGGTGCCAGGAGCATGCAGTGGAAGCGGGATAGTCAGACCACAACTTCTGACAATGGTGCTTCTCTCCCTGGTAATTCTGTACCCTCATCTGGTGCTCGTAGTCTCACCTATGTTCGAACAGAACCTAAGGCAGCGGACAAGTAGAAACCACTTGATTGAGAGAGTTGCTCTCTCCTCAAGAAATTGTTCAAAATTATTTAGCGAAAAGAGAATCACGCAGATCAAGTATGACCTCCCCAAATTTGTTCCTTTTTTTTTGGTGGTTTATGATTCTTCGTGCATCATGGTGGAGGAAACTGAGAAAGAAGACCAAGGGAAGTTTTAGCAGTTTCAGGAGGAATATTTTTTTGTTCCATCGGGGAATGGAAATTGGTGAGTTTATAGCTAGGAAACTCATGATGGCGGTTCGGATGATTTCATAATTTTGAGCTCCCCCCTCTCATTCAGAATTCTTATTCAGCTACTAGATTAAAATTTGTGAATAGAGTAAGAGTAGAACCTTTTTTGTTTAACGGATATTATGATATTTTGTAATTTTTATTACTGATGTGACAGAAAGAGAATGAAAAAAAAGAAAAATAGTTACATGAAAAGAAAATGAATAAATTTTCCTAGTTTTGTATATCAGCATGTCTTTGTACCTGTATATTAGCATGTTTAAGCATGGGTTATGATAGCCGGATTTCCC

mRNA sequence

ATCATCTCAAATCTCTCTCCCTCAGCCATGTGCTTTGATGAAATTCGCGCTCCGTTGCTTTTCTGCGTTTAATTTCCAGCCTCTTCCCCGTTAATCGCTTCTCTCCGTCGAGTTTCACAGAAGTCGGTGGACCCGGCTAGGGTTCATGGAAGCTGCAATTCCGGAGCTCAATATTTGAGGGTTTGAATATACCAATTGAACTCCGGTTTTAGTGTTGAGAGTGAGCGTTCGCTGTTCTGGATTGTGGAGCTCCGTGAAAAAACGCGTCGGATATGGGGAGTGAGGATCGTGTCGATGATCGGACGTTCAAGATTGATTTCAGTGGCGACGGAATGGCGAAGCTCAGAGAGAGGATAAAGCTGAAGATGAAGGAATTCATGGGCGATTATACTGATGACACTCTCGTGGAATACGTGATTGTCTTGTTGAGGAACGGCAGGCGCAAAGAAGAAGCACAGAATGAACTAAATGTATTTTTGGCAGATGATAGCCATTCTTTTGTATCTTGGCTGTGGGACCATCTGGCTTCAAGTATGGATTTATATGTGGACACGCCTAATAAATCTTCTGCCAGTGAAGTGCCCAGACCGAAATCTCCAGTAGCAGAACCGGATAGAAGAAATGATTCTCGCAATCTGGAGTCTGATTCAGAAAGAGGGAAGTCTGAAAAATTATCTAGCAGGCGGCGTAATAGGGAATGGAAAGGAATTTCTAATGAGGAAACCCGTGTTACTCCAAGATCTGAAGTTAGTCGTGTCAAGCATTCTTCTCCTGAACAAGTTCCTAGTCATAGGAAAAGGAGCCGAGCTGATGATCATCAAGGCACTGAGAGGGAGGCAGCCTTTCAGGTAAGCATTGCTGCCCCTAGGCGGCTGCTCCAGTTTGCAATGCGAGATGCTGTGGCCACCACAAGGCCCTCTAATGCAGCTAAGGAGCCCCTTTCGAAGCGTCTTCGTTCAGTAGTTTCTACTTCCAATAATGACACGACTAATCGTCCCAAGCGGCTCCAATCTGTCGCAAAAGTGCCAAATCCTATGGCAACTGTTATTAAGGCTGTCACGGAGGCAGCTGAAGATGTGATAAGAGTTAAATCCTCCAGTGTTTTTGACCGACTTGGTCGTCAATCTCGTGATATGGATTTAACAGAGTCCAGTGGCCAACTTGCAGAATATGGAGCAACTGCTGCAGAGGATGATAAATATGGGGATATGAATCATACACAGGATCGACCATACTCAGCAACGTATCTTGAGAGAAGCAATTATAGTGGGAAATATACTCCCGATGAAGCCATGTTTGAAGCTGAAACTGGATTAGCATCAGATTCTACATCTGAAAATGAAGATGTTACTATTCAGGGTCACAGAGTATTTGACAATTCTTGGACTGCAGAATCAGGAGTAAGAAAGGGAGGCAATTTGCGGACCGTGCCATTCAGGGTAGTTGAGAATGCTGATGATGAACGCATGACACATTATAAACAGAAGGATCAACCTTCCTTAGTTGCAAATTCCTCACGTGACATTGTAAATATCTCTGTGAATGTTAATACTTGGAAACCACCTCACTATCAGGGCCCAGGGCAGATTGCTGAACTTGGTGGTCAAAAGTTTTTGCAGGAGAGTGAGTTACAAGGTACCAGATCTGCTGTGCAAGTAATGGAAAATGGCGAGCCAGTCACGATTGTTAACCAACAGAAAAAGCCTGCAGCAAACCTTGAAAAAGAGTTCCAGAAACCTTCTTTATCTGCTAATGGCCAATTTGCTGCCACTCGTCCTTTAGAGGATGCTGATGCTCGAACCATTTTTGTTAGCAATGTTCACTTTGCTGCTACAAAGGATAGCCTGTCTAGGCATTTTAACAAGTTTGGAGAAGTTGTAAAAGTCATCATTGTAACCGATGCAACCACCGGGCAACCCAAAGGGTCGGCTTATGTGGAGTTCATGAAAAAAGAAGCTGCAGAAAATGCGTTGTCACTGGATGGGACCTCGTTTATGTCTAGGATTCTGAAGGTCGTAAGGAAAAATGCTTCACAATTAGAAGGTGCTTCAATTGTTACCTGGCCTCGTGCTGTGCGTGGCTCGCCATTTCCTACTCCTAGATTTACCAGAGTTCCTTTCCCCAGGGGCATTCCCGGTGGATTTAGGCCTCGTCCCCCCATCAAACTTGGTGCCAGGAGCATGCAGTGGAAGCGGGATAGTCAGACCACAACTTCTGACAATGGTGCTTCTCTCCCTGGTAATTCTGTACCCTCATCTGGTGCTCGTAGTCTCACCTATGTTCGAACAGAACCTAAGGCAGCGGACAAGTAGAAACCACTTGATTGAGAGAGTTGCTCTCTCCTCAAGAAATTGTTCAAAATTATTTAGCGAAAAGAGAATCACGCAGATCAAGTATGACCTCCCCAAATTTGTTCCTTTTTTTTTGGTGGTTTATGATTCTTCGTGCATCATGGTGGAGGAAACTGAGAAAGAAGACCAAGGGAAGTTTTAGCAGTTTCAGGAGGAATATTTTTTTGTTCCATCGGGGAATGGAAATTGGTGAGTTTATAGCTAGGAAACTCATGATGGCGGTTCGGATGATTTCATAATTTTGAGCTCCCCCCTCTCATTCAGAATTCTTATTCAGCTACTAGATTAAAATTTGTGAATAGAGTAAGAGTAGAACCTTTTTTGTTTAACGGATATTATGATATTTTGTAATTTTTATTACTGATGTGACAGAAAGAGAATGAAAAAAAAGAAAAATAGTTACATGAAAAGAAAATGAATAAATTTTCCTAGTTTTGTATATCAGCATGTCTTTGTACCTGTATATTAGCATGTTTAAGCATGGGTTATGATAGCCGGATTTCCC

Coding sequence (CDS)

ATGGGGAGTGAGGATCGTGTCGATGATCGGACGTTCAAGATTGATTTCAGTGGCGACGGAATGGCGAAGCTCAGAGAGAGGATAAAGCTGAAGATGAAGGAATTCATGGGCGATTATACTGATGACACTCTCGTGGAATACGTGATTGTCTTGTTGAGGAACGGCAGGCGCAAAGAAGAAGCACAGAATGAACTAAATGTATTTTTGGCAGATGATAGCCATTCTTTTGTATCTTGGCTGTGGGACCATCTGGCTTCAAGTATGGATTTATATGTGGACACGCCTAATAAATCTTCTGCCAGTGAAGTGCCCAGACCGAAATCTCCAGTAGCAGAACCGGATAGAAGAAATGATTCTCGCAATCTGGAGTCTGATTCAGAAAGAGGGAAGTCTGAAAAATTATCTAGCAGGCGGCGTAATAGGGAATGGAAAGGAATTTCTAATGAGGAAACCCGTGTTACTCCAAGATCTGAAGTTAGTCGTGTCAAGCATTCTTCTCCTGAACAAGTTCCTAGTCATAGGAAAAGGAGCCGAGCTGATGATCATCAAGGCACTGAGAGGGAGGCAGCCTTTCAGGTAAGCATTGCTGCCCCTAGGCGGCTGCTCCAGTTTGCAATGCGAGATGCTGTGGCCACCACAAGGCCCTCTAATGCAGCTAAGGAGCCCCTTTCGAAGCGTCTTCGTTCAGTAGTTTCTACTTCCAATAATGACACGACTAATCGTCCCAAGCGGCTCCAATCTGTCGCAAAAGTGCCAAATCCTATGGCAACTGTTATTAAGGCTGTCACGGAGGCAGCTGAAGATGTGATAAGAGTTAAATCCTCCAGTGTTTTTGACCGACTTGGTCGTCAATCTCGTGATATGGATTTAACAGAGTCCAGTGGCCAACTTGCAGAATATGGAGCAACTGCTGCAGAGGATGATAAATATGGGGATATGAATCATACACAGGATCGACCATACTCAGCAACGTATCTTGAGAGAAGCAATTATAGTGGGAAATATACTCCCGATGAAGCCATGTTTGAAGCTGAAACTGGATTAGCATCAGATTCTACATCTGAAAATGAAGATGTTACTATTCAGGGTCACAGAGTATTTGACAATTCTTGGACTGCAGAATCAGGAGTAAGAAAGGGAGGCAATTTGCGGACCGTGCCATTCAGGGTAGTTGAGAATGCTGATGATGAACGCATGACACATTATAAACAGAAGGATCAACCTTCCTTAGTTGCAAATTCCTCACGTGACATTGTAAATATCTCTGTGAATGTTAATACTTGGAAACCACCTCACTATCAGGGCCCAGGGCAGATTGCTGAACTTGGTGGTCAAAAGTTTTTGCAGGAGAGTGAGTTACAAGGTACCAGATCTGCTGTGCAAGTAATGGAAAATGGCGAGCCAGTCACGATTGTTAACCAACAGAAAAAGCCTGCAGCAAACCTTGAAAAAGAGTTCCAGAAACCTTCTTTATCTGCTAATGGCCAATTTGCTGCCACTCGTCCTTTAGAGGATGCTGATGCTCGAACCATTTTTGTTAGCAATGTTCACTTTGCTGCTACAAAGGATAGCCTGTCTAGGCATTTTAACAAGTTTGGAGAAGTTGTAAAAGTCATCATTGTAACCGATGCAACCACCGGGCAACCCAAAGGGTCGGCTTATGTGGAGTTCATGAAAAAAGAAGCTGCAGAAAATGCGTTGTCACTGGATGGGACCTCGTTTATGTCTAGGATTCTGAAGGTCGTAAGGAAAAATGCTTCACAATTAGAAGGTGCTTCAATTGTTACCTGGCCTCGTGCTGTGCGTGGCTCGCCATTTCCTACTCCTAGATTTACCAGAGTTCCTTTCCCCAGGGGCATTCCCGGTGGATTTAGGCCTCGTCCCCCCATCAAACTTGGTGCCAGGAGCATGCAGTGGAAGCGGGATAGTCAGACCACAACTTCTGACAATGGTGCTTCTCTCCCTGGTAATTCTGTACCCTCATCTGGTGCTCGTAGTCTCACCTATGTTCGAACAGAACCTAAGGCAGCGGACAAGTAG

Protein sequence

MGSEDRVDDRTFKIDFSGDGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVDTPNKSSASEVPRPKSPVAEPDRRNDSRNLESDSERGKSEKLSSRRRNREWKGISNEETRVTPRSEVSRVKHSSPEQVPSHRKRSRADDHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPLSKRLRSVVSTSNNDTTNRPKRLQSVAKVPNPMATVIKAVTEAAEDVIRVKSSSVFDRLGRQSRDMDLTESSGQLAEYGATAAEDDKYGDMNHTQDRPYSATYLERSNYSGKYTPDEAMFEAETGLASDSTSENEDVTIQGHRVFDNSWTAESGVRKGGNLRTVPFRVVENADDERMTHYKQKDQPSLVANSSRDIVNISVNVNTWKPPHYQGPGQIAELGGQKFLQESELQGTRSAVQVMENGEPVTIVNQQKKPAANLEKEFQKPSLSANGQFAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVIIVTDATTGQPKGSAYVEFMKKEAAENALSLDGTSFMSRILKVVRKNASQLEGASIVTWPRAVRGSPFPTPRFTRVPFPRGIPGGFRPRPPIKLGARSMQWKRDSQTTTSDNGASLPGNSVPSSGARSLTYVRTEPKAADK

Homology

[Close]

BLAST of Lcy02g004210 vs. ExPASy Swiss-Prot
Match: Q9DDY9 (Polyadenylate-binding protein 2-A OS=Xenopus laevis OX=8355 GN=pabpn1-a PE=2 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 1.6e-14
Identity = 51/154 (33.12%), Postives = 82/154 (53.25%), Query Frame = 0


Query: 441 ELGGQKFLQESELQGTRSAVQVMENGEPVTIVNQQKKPAANLEKEFQK------PSLSAN 500
           EL G + +++ EL+  ++ V+ ME         ++ +    L+ E +K      P  +A 
Sbjct: 98  ELTGDQTIEDPELEAIKARVREME---------EEAEKLKELQNEVEKQMNMSPPPGNAG 157

Query: 501 GQFAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVIIVTDATTGQPKGSAY 560
               +     +ADAR+I+V NV + AT + L  HF+  G V +V I+ D  TG PKG AY
Sbjct: 158 PVIMSVEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKGFAY 217

Query: 561 VEFMKKEAAENALSLDGTSFMSRILKVVRKNASQ 589
           +EF  KE+   +L+LD + F  R +KVV K  ++
Sbjct: 218 IEFCDKESVRTSLALDESLFRGRQIKVVPKRTNR 242

[Close]

BLAST of Lcy02g004210 vs. ExPASy Swiss-Prot
Match: Q7ZXB8 (Polyadenylate-binding protein 2-B OS=Xenopus laevis OX=8355 GN=pabpn1-b PE=2 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 1.6e-14
Identity = 51/154 (33.12%), Postives = 82/154 (53.25%), Query Frame = 0


Query: 441 ELGGQKFLQESELQGTRSAVQVMENGEPVTIVNQQKKPAANLEKEFQK------PSLSAN 500
           EL G + +++ EL+  ++ V+ ME         ++ +    L+ E +K      P  +A 
Sbjct: 97  ELTGDQTIEDPELEAIKARVREME---------EEAEKLKELQNEVEKQMNMSPPPGNAG 156

Query: 501 GQFAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVIIVTDATTGQPKGSAY 560
               +     +ADAR+I+V NV + AT + L  HF+  G V +V I+ D  TG PKG AY
Sbjct: 157 PVIMSVEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKGFAY 216

Query: 561 VEFMKKEAAENALSLDGTSFMSRILKVVRKNASQ 589
           +EF  KE+   +L+LD + F  R +KVV K  ++
Sbjct: 217 IEFSDKESVRTSLALDESLFRGRQIKVVPKRTNR 241

[Close]

BLAST of Lcy02g004210 vs. ExPASy Swiss-Prot
Match: Q6NVP7 (Polyadenylate-binding protein 2 OS=Xenopus tropicalis OX=8364 GN=pabpn1 PE=2 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 2.1e-14
Identity = 51/154 (33.12%), Postives = 82/154 (53.25%), Query Frame = 0


Query: 441 ELGGQKFLQESELQGTRSAVQVMENGEPVTIVNQQKKPAANLEKEFQK------PSLSAN 500
           EL G + +++ EL+  ++ V+ ME         ++ +    L+ E +K      P  +A 
Sbjct: 98  ELTGDQTIEDPELEAIKARVREME---------EEAEKLKELQNEVEKQMNMSPPPGNAG 157

Query: 501 GQFAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVIIVTDATTGQPKGSAY 560
               +     +ADAR+I+V NV + AT + L  HF+  G V +V I+ D  TG PKG AY
Sbjct: 158 PVIMSIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKGFAY 217

Query: 561 VEFMKKEAAENALSLDGTSFMSRILKVVRKNASQ 589
           +EF  KE+   +L+LD + F  R +KVV K  ++
Sbjct: 218 IEFSDKESVRTSLALDESLFRGRQIKVVPKRTNR 242

[Close]

BLAST of Lcy02g004210 vs. ExPASy Swiss-Prot
Match: Q86U42 (Polyadenylate-binding protein 2 OS=Homo sapiens OX=9606 GN=PABPN1 PE=1 SV=3)

HSP 1 Score: 78.2 bits (191), Expect = 4.0e-13
Identity = 64/213 (30.05%), Postives = 102/213 (47.89%), Query Frame = 0


Query: 436 PGQIAELGGQKFLQESELQGTRSAVQVMENGEPVTIVNQQKKPAANLEKEFQK------P 495
           PG +    G   +++ EL+  ++ V+ ME         ++ +    L+ E +K      P
Sbjct: 102 PGLVEGDPGDGAIEDPELEAIKARVREME---------EEAEKLKELQNEVEKQMNMSPP 161

Query: 496 SLSANGQFAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVIIVTDATTGQP 555
             +A     +     +ADAR+I+V NV + AT + L  HF+  G V +V I+ D  +G P
Sbjct: 162 PGNAGPVIMSIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHP 221

Query: 556 KGSAYVEFMKKEAAENALSLDGTSFMSRILKVVRKNASQLEGASIVT--WPRAVRGSPFP 615
           KG AY+EF  KE+   +L+LD + F  R +KV+ K  ++  G S     +PRA   +   
Sbjct: 222 KGFAYIEFSDKESVRTSLALDESLFRGRQIKVIPKRTNR-PGISTTDRGFPRARYRARTT 281

Query: 616 TPRFTRVPFPRGIPGGFRPRPPIKLG-ARSMQW 640
               +R  F  G     RPR  +  G AR+  W
Sbjct: 282 NYNSSRSRFYSGF--NSRPRGRVYRGRARATSW 302

[Close]

BLAST of Lcy02g004210 vs. ExPASy Swiss-Prot
Match: Q8CCS6 (Polyadenylate-binding protein 2 OS=Mus musculus OX=10090 GN=Pabpn1 PE=1 SV=3)

HSP 1 Score: 77.8 bits (190), Expect = 5.3e-13
Identity = 64/213 (30.05%), Postives = 102/213 (47.89%), Query Frame = 0


Query: 436 PGQIAELGGQKFLQESELQGTRSAVQVMENGEPVTIVNQQKKPAANLEKEFQK------P 495
           PG +    G   +++ EL+  ++ V+ ME         ++ +    L+ E +K      P
Sbjct: 98  PGLVEADPGDGAIEDPELEAIKARVREME---------EEAEKLKELQNEVEKQMNMSPP 157

Query: 496 SLSANGQFAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVIIVTDATTGQP 555
             +A     +     +ADAR+I+V NV + AT + L  HF+  G V +V I+ D  +G P
Sbjct: 158 PGNAGPVIMSLEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHP 217

Query: 556 KGSAYVEFMKKEAAENALSLDGTSFMSRILKVVRKNASQLEGASIVT--WPRAVRGSPFP 615
           KG AY+EF  KE+   +L+LD + F  R +KV+ K  ++  G S     +PR+   +   
Sbjct: 218 KGFAYIEFSDKESVRTSLALDESLFRGRQIKVIPKRTNR-PGISTTDRGFPRSRYRARTT 277

Query: 616 TPRFTRVPFPRGIPGGFRPRPPIKLG-ARSMQW 640
               +R  F  G     RPR  I  G AR+  W
Sbjct: 278 NYNSSRSRFYSGF--NSRPRGRIYRGRARATSW 298

[Close]

BLAST of Lcy02g004210 vs. ExPASy TrEMBL
Match: A0A6J1GC70 (nucleolin 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111452645 PE=4 SV=1)

HSP 1 Score: 1164.1 bits (3010), Expect = 0.0e+00
Identity = 608/679 (89.54%), Postives = 638/679 (93.96%), Query Frame = 0


Query: 1   MGSEDRVDDRTFKIDFSGDGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEE 60
           MGSEDR+DDRTFK+DFSG+GM KLRERIKLKMKEFMGDYTDDTLVEYV+VLLRNGRRKEE
Sbjct: 1   MGSEDRIDDRTFKVDFSGEGMEKLRERIKLKMKEFMGDYTDDTLVEYVLVLLRNGRRKEE 60

Query: 61  AQNELNVFLADDSHSFVSWLWDHLASSMDLYVDTPNKSSASEVPRPKSPVAEPDRRNDSR 120
           AQNELNVFLADDSHSFVSWLWDHLASSM+LYV+ P KSSA EVP  KSPVAEPD    S 
Sbjct: 61  AQNELNVFLADDSHSFVSWLWDHLASSMNLYVEPPPKSSADEVPISKSPVAEPDTGIGSH 120

Query: 121 NLESDSERGKSEKLSSRRRNREWKGISNEETRVTPRSEVSRVKHSSPEQVPSHRKRSRAD 180
           NLESD ERGKSEKLSSRRRNREWKGI+N+ETRVTPRSEVSRVKHSSPEQVPSHRKRSRAD
Sbjct: 121 NLESDLERGKSEKLSSRRRNREWKGIANDETRVTPRSEVSRVKHSSPEQVPSHRKRSRAD 180

Query: 181 DHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPLSKRLRSVVSTSNNDTTN 240
           DHQG EREAAFQVSIAAPRRLLQFAMRDAVAT +PSN AKEPLSKRLRSVVSTS +DTT+
Sbjct: 181 DHQGAEREAAFQVSIAAPRRLLQFAMRDAVATVKPSNGAKEPLSKRLRSVVSTSKSDTTS 240

Query: 241 RPKRLQSVAKVPNPMATVIKAVTEAAEDVIRVKSSSVFDRLGRQSRDMDLTESSGQLAEY 300
            P+RLQSVAKVPNPMATVIKAV+EAAEDVIRVKSSSVFDRLGRQSRD+D  ESSGQ+AEY
Sbjct: 241 HPRRLQSVAKVPNPMATVIKAVSEAAEDVIRVKSSSVFDRLGRQSRDVDSKESSGQVAEY 300

Query: 301 GATAAEDDKYGDMNHTQDRPYSATYLERSNYSGKYTPDEAMFEAETGLASDSTSENEDVT 360
           G TA ED KYGDMNHTQDRPYSATYLE SNYSGKYTP EAMF+AETGLASDSTSE+EDVT
Sbjct: 301 GVTAVEDHKYGDMNHTQDRPYSATYLESSNYSGKYTPIEAMFDAETGLASDSTSESEDVT 360

Query: 361 IQGHRVFDNSWTAESGVRKGGNLRTVPFRVVENADDERMTHYKQKDQPSLVANSSRDIVN 420
           I GH+VFD+SWTAESGVRKGGNLRT PFRVVEN DDERMT YKQK QPSLVANSSRDIVN
Sbjct: 361 ILGHKVFDDSWTAESGVRKGGNLRTAPFRVVENVDDERMTKYKQKHQPSLVANSSRDIVN 420

Query: 421 ISVNVNTWKPPHYQGPGQIAELGGQKFLQESELQGTRSAVQVMENGEPVTIVNQQKKPAA 480
           ISVNVNTWKPPHYQ PGQIAE GGQKFLQESEL+GTRSAV+V ENGEPVTIVNQQKKPAA
Sbjct: 421 ISVNVNTWKPPHYQDPGQIAESGGQKFLQESELRGTRSAVKVTENGEPVTIVNQQKKPAA 480

Query: 481 NLEKEFQKPSLSANGQFAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVII 540
           +L+KEFQKP  SANG  AATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVII
Sbjct: 481 HLQKEFQKP--SANG-LAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVII 540

Query: 541 VTDATTGQPKGSAYVEFMKKEAAENALSLDGTSFMSRILKVVRKNASQLEGASIVTWPRA 600
           VTDATTGQPKGSAYVEFM+KEAAENALSLDGTSF+SRILKV RKNASQ EGASIVTWPRA
Sbjct: 541 VTDATTGQPKGSAYVEFMRKEAAENALSLDGTSFLSRILKVARKNASQPEGASIVTWPRA 600

Query: 601 VRGSPFPTPRFTRVPFPRGIPGGFRPRPPIKLGARSMQWKRDSQTTTSDNGASLPGNSVP 660
           VRGSP+PTPRF+RVPFPRG+PGGFRPRPPIKLGARSMQWKRDSQTTT+DNGASL G SVP
Sbjct: 601 VRGSPYPTPRFSRVPFPRGVPGGFRPRPPIKLGARSMQWKRDSQTTTTDNGASLYGISVP 660

Query: 661 SSGARSLTYVRTEPKAADK 680
           S+GARSLTYVRTEPK ADK
Sbjct: 661 STGARSLTYVRTEPKPADK 676

[Close]

BLAST of Lcy02g004210 vs. ExPASy TrEMBL
Match: A0A6J1KE94 (uncharacterized protein LOC111493050 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493050 PE=4 SV=1)

HSP 1 Score: 1162.1 bits (3005), Expect = 0.0e+00
Identity = 607/679 (89.40%), Postives = 635/679 (93.52%), Query Frame = 0


Query: 1   MGSEDRVDDRTFKIDFSGDGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEE 60
           MGSEDR+DDRTFK+DFSG+GM KLRERIKLKMKEFMGDYTDDTLVEYV+VLLRNGRRKEE
Sbjct: 1   MGSEDRIDDRTFKVDFSGEGMEKLRERIKLKMKEFMGDYTDDTLVEYVLVLLRNGRRKEE 60

Query: 61  AQNELNVFLADDSHSFVSWLWDHLASSMDLYVDTPNKSSASEVPRPKSPVAEPDRRNDSR 120
           AQNELNVFLADDSHSFVSWLWDHLASSM+LYV+ P KSSA EVPR KSPVAEPD    S 
Sbjct: 61  AQNELNVFLADDSHSFVSWLWDHLASSMNLYVEPPPKSSADEVPRSKSPVAEPDTGIGSH 120

Query: 121 NLESDSERGKSEKLSSRRRNREWKGISNEETRVTPRSEVSRVKHSSPEQVPSHRKRSRAD 180
           NLESD ERGKSEKLSSRRRNREWKGI+NEETRVTPRSEVSRVKHSSPEQVPSHRKRSRAD
Sbjct: 121 NLESDLERGKSEKLSSRRRNREWKGIANEETRVTPRSEVSRVKHSSPEQVPSHRKRSRAD 180

Query: 181 DHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPLSKRLRSVVSTSNNDTTN 240
           DHQG EREA FQVSIAAPRRLLQFAMRDAVAT +PSN AKEPLSKRLRSVVSTSN+DTT+
Sbjct: 181 DHQGAEREATFQVSIAAPRRLLQFAMRDAVATVKPSNGAKEPLSKRLRSVVSTSNSDTTS 240

Query: 241 RPKRLQSVAKVPNPMATVIKAVTEAAEDVIRVKSSSVFDRLGRQSRDMDLTESSGQLAEY 300
            P+RLQSVAKVPNPMATVIKAV+EAAEDVIRVKSSSVFDRLGRQSRD DL ESSGQ+AEY
Sbjct: 241 HPRRLQSVAKVPNPMATVIKAVSEAAEDVIRVKSSSVFDRLGRQSRDADLKESSGQVAEY 300

Query: 301 GATAAEDDKYGDMNHTQDRPYSATYLERSNYSGKYTPDEAMFEAETGLASDSTSENEDVT 360
           G T  ED KYGDMNHTQDRPYSATYLE SNYSGKYTP EAMF+AETGLASDSTSE+EDVT
Sbjct: 301 GVTPVEDHKYGDMNHTQDRPYSATYLESSNYSGKYTPIEAMFDAETGLASDSTSESEDVT 360

Query: 361 IQGHRVFDNSWTAESGVRKGGNLRTVPFRVVENADDERMTHYKQKDQPSLVANSSRDIVN 420
           I GH+VFD+SWTAESGVRKGGNLRT PFRVVEN DDERM  YKQK QPSLVANSSRDIVN
Sbjct: 361 ILGHKVFDDSWTAESGVRKGGNLRTAPFRVVENVDDERMIKYKQKHQPSLVANSSRDIVN 420

Query: 421 ISVNVNTWKPPHYQGPGQIAELGGQKFLQESELQGTRSAVQVMENGEPVTIVNQQKKPAA 480
           ISVNVNTWKPPHYQ PGQIAE GGQKFLQ SEL+GTRSAV+V ENGEPVTIVNQQKKP A
Sbjct: 421 ISVNVNTWKPPHYQDPGQIAESGGQKFLQGSELRGTRSAVKVTENGEPVTIVNQQKKPVA 480

Query: 481 NLEKEFQKPSLSANGQFAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVII 540
           +L+KEFQKP  SANG  AATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVII
Sbjct: 481 HLQKEFQKP--SANG-LAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVII 540

Query: 541 VTDATTGQPKGSAYVEFMKKEAAENALSLDGTSFMSRILKVVRKNASQLEGASIVTWPRA 600
           VTDATTGQPKGSAYVEFM+KEAAENALSLDGTSF+SRILKV RKNASQ EGASIVTWPRA
Sbjct: 541 VTDATTGQPKGSAYVEFMRKEAAENALSLDGTSFLSRILKVARKNASQPEGASIVTWPRA 600

Query: 601 VRGSPFPTPRFTRVPFPRGIPGGFRPRPPIKLGARSMQWKRDSQTTTSDNGASLPGNSVP 660
           VRGSP+PTPRF+RVPFPRG+PGGFRPRPPIKLGARSMQWKRDSQTTT+DNGASL G SVP
Sbjct: 601 VRGSPYPTPRFSRVPFPRGVPGGFRPRPPIKLGARSMQWKRDSQTTTTDNGASLYGISVP 660

Query: 661 SSGARSLTYVRTEPKAADK 680
           S+GARSLTYVRTEPK ADK
Sbjct: 661 STGARSLTYVRTEPKPADK 676

[Close]

BLAST of Lcy02g004210 vs. ExPASy TrEMBL
Match: A0A5A7U3W4 (Nucleolin 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G00490 PE=4 SV=1)

HSP 1 Score: 1160.6 bits (3001), Expect = 0.0e+00
Identity = 597/679 (87.92%), Postives = 639/679 (94.11%), Query Frame = 0


Query: 1   MGSEDRVDDRTFKIDFSGDGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEE 60
           MGSEDRVDDRTFK+DF+G+GMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRR+EE
Sbjct: 6   MGSEDRVDDRTFKVDFTGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRREE 65

Query: 61  AQNELNVFLADDSHSFVSWLWDHLASSMDLYVDTPNKSSASEVPRPKSPVAEPDRRNDSR 120
           AQNELNVFLADDSHSFVSWLWDHLASSMDLYV+ P KSSA+EVPRPKSPVAEPD RN+S 
Sbjct: 66  AQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKSSANEVPRPKSPVAEPDTRNNSH 125

Query: 121 NLESDSERGKSEKLSSRRRNREWKGISNEETRVTPRSEVSRVKHSSPEQVPSHRKRSRAD 180
           NLESDSERGK+EKLSSRRRNREW+GI+NEETRV P+SEVSRVKHSSPEQVP+HRKRSR D
Sbjct: 126 NLESDSERGKTEKLSSRRRNREWRGIANEETRVIPKSEVSRVKHSSPEQVPNHRKRSRPD 185

Query: 181 DHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPLSKRLRSVVSTSNNDTTN 240
           D QGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEP SKRLRSVVS SN+DTTN
Sbjct: 186 D-QGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPHSKRLRSVVSASNSDTTN 245

Query: 241 RPKRLQSVAKVPNPMATVIKAVTEAAEDVIRVKSSSVFDRLGRQSRDMDLTESSGQLAEY 300
           RP+RLQSVAKVPNPMATVIKAVTEA+EDV+RVKSSSVFDRLGRQSRDMDLTESSG+L EY
Sbjct: 246 RPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSGRLGEY 305

Query: 301 GATAAEDDKYGDMNHTQDRPYSATYLERSNYSGKYTPDEAMFEAETGLASDSTSENEDVT 360
           G T+ E+D+YGDMNH++DRPYSATYLERSNY GKY+ DE MFE ETGLASDS SENEDV 
Sbjct: 306 GVTSVENDQYGDMNHSEDRPYSATYLERSNYIGKYSRDEPMFEPETGLASDSASENEDVN 365

Query: 361 IQGHRVFDNSWTAESGVRKGGNLRTVPFRVVENADDERMTHYKQKDQPSLVANSSRDIVN 420
           I+GHRVFD+SWTAESGVRKG NLRTV FR V+N+DDER+  Y QKDQPSL ANSSRDIVN
Sbjct: 366 IRGHRVFDDSWTAESGVRKGSNLRTVAFRAVDNSDDERVAQYTQKDQPSLAANSSRDIVN 425

Query: 421 ISVNVNTWKPPHYQGPGQIAELGGQKFLQESELQGTRSAVQVMENGEPVTIVNQQKKPAA 480
           ISVNVNTWKPPHYQ  GQI EL GQKFLQESELQGTRSAVQV ENGEPVT+VNQ+K PA+
Sbjct: 426 ISVNVNTWKPPHYQDQGQIPELAGQKFLQESELQGTRSAVQVTENGEPVTLVNQRKTPAS 485

Query: 481 NLEKEFQKPSLSANGQFAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVII 540
           NL+KEFQKP LSANGQFA+TRPLE+ADARTIFVSNVHFAATKDSLSRHFNKFGEV+KVII
Sbjct: 486 NLQKEFQKPPLSANGQFASTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEVLKVII 545

Query: 541 VTDATTGQPKGSAYVEFMKKEAAENALSLDGTSFMSRILKVVRKNASQLEGASIVTWPRA 600
           VTDATTGQPKGSAYVEFM+KE+AENALSLDGTSFMSRILKVVRKNASQLEGAS VTWPRA
Sbjct: 546 VTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNASQLEGASTVTWPRA 605

Query: 601 VRGSPFPTPRFTRVPFPRGIPGGFRPRPPIKLGARSMQWKRDSQTTTSDNGASLPGNSVP 660
           VRGSPFPT RFTRVPF RG+PGGFR RPP+KLGARSMQWKRD+QT T+DNGASL GNS+P
Sbjct: 606 VRGSPFPTSRFTRVPFMRGVPGGFRARPPMKLGARSMQWKRDNQTATADNGASLSGNSIP 665

Query: 661 SSGARSLTYVRTEPKAADK 680
           S GARSLTYVRTEPK ADK
Sbjct: 666 SPGARSLTYVRTEPKPADK 683

[Close]

BLAST of Lcy02g004210 vs. ExPASy TrEMBL
Match: A0A1S3CFE4 (nucleolin 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500309 PE=4 SV=1)

HSP 1 Score: 1160.6 bits (3001), Expect = 0.0e+00
Identity = 597/679 (87.92%), Postives = 639/679 (94.11%), Query Frame = 0


Query: 1   MGSEDRVDDRTFKIDFSGDGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEE 60
           MGSEDRVDDRTFK+DF+G+GMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRR+EE
Sbjct: 6   MGSEDRVDDRTFKVDFTGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRREE 65

Query: 61  AQNELNVFLADDSHSFVSWLWDHLASSMDLYVDTPNKSSASEVPRPKSPVAEPDRRNDSR 120
           AQNELNVFLADDSHSFVSWLWDHLASSMDLYV+ P KSSA+EVPRPKSPVAEPD RN+S 
Sbjct: 66  AQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKSSANEVPRPKSPVAEPDTRNNSH 125

Query: 121 NLESDSERGKSEKLSSRRRNREWKGISNEETRVTPRSEVSRVKHSSPEQVPSHRKRSRAD 180
           NLESDSERGK+EKLSSRRRNREW+GI+NEETRV P+SEVSRVKHSSPEQVP+HRKRSR D
Sbjct: 126 NLESDSERGKTEKLSSRRRNREWRGIANEETRVIPKSEVSRVKHSSPEQVPNHRKRSRPD 185

Query: 181 DHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPLSKRLRSVVSTSNNDTTN 240
           D QGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEP SKRLRSVVS SN+DTTN
Sbjct: 186 D-QGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPHSKRLRSVVSASNSDTTN 245

Query: 241 RPKRLQSVAKVPNPMATVIKAVTEAAEDVIRVKSSSVFDRLGRQSRDMDLTESSGQLAEY 300
           RP+RLQSVAKVPNPMATVIKAVTEA+EDV+RVKSSSVFDRLGRQSRDMDLTESSG+L EY
Sbjct: 246 RPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSGRLGEY 305

Query: 301 GATAAEDDKYGDMNHTQDRPYSATYLERSNYSGKYTPDEAMFEAETGLASDSTSENEDVT 360
           G T+ E+D+YGDMNH++DRPYSATYLERSNY GKY+ DE MFE ETGLASDS SENEDV 
Sbjct: 306 GVTSVENDQYGDMNHSEDRPYSATYLERSNYIGKYSRDEPMFEPETGLASDSASENEDVN 365

Query: 361 IQGHRVFDNSWTAESGVRKGGNLRTVPFRVVENADDERMTHYKQKDQPSLVANSSRDIVN 420
           I+GHRVFD+SWTAESGVRKG NLRTV FR V+N+DDER+  Y QKDQPSL ANSSRDIVN
Sbjct: 366 IRGHRVFDDSWTAESGVRKGSNLRTVAFRAVDNSDDERVAQYTQKDQPSLAANSSRDIVN 425

Query: 421 ISVNVNTWKPPHYQGPGQIAELGGQKFLQESELQGTRSAVQVMENGEPVTIVNQQKKPAA 480
           ISVNVNTWKPPHYQ  GQI EL GQKFLQESELQGTRSAVQV ENGEPVT+VNQ+K PA+
Sbjct: 426 ISVNVNTWKPPHYQDQGQIPELAGQKFLQESELQGTRSAVQVTENGEPVTLVNQRKTPAS 485

Query: 481 NLEKEFQKPSLSANGQFAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVII 540
           NL+KEFQKP LSANGQFA+TRPLE+ADARTIFVSNVHFAATKDSLSRHFNKFGEV+KVII
Sbjct: 486 NLQKEFQKPPLSANGQFASTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEVLKVII 545

Query: 541 VTDATTGQPKGSAYVEFMKKEAAENALSLDGTSFMSRILKVVRKNASQLEGASIVTWPRA 600
           VTDATTGQPKGSAYVEFM+KE+AENALSLDGTSFMSRILKVVRKNASQLEGAS VTWPRA
Sbjct: 546 VTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNASQLEGASTVTWPRA 605

Query: 601 VRGSPFPTPRFTRVPFPRGIPGGFRPRPPIKLGARSMQWKRDSQTTTSDNGASLPGNSVP 660
           VRGSPFPT RFTRVPF RG+PGGFR RPP+KLGARSMQWKRD+QT T+DNGASL GNS+P
Sbjct: 606 VRGSPFPTSRFTRVPFMRGVPGGFRARPPMKLGARSMQWKRDNQTATADNGASLSGNSIP 665

Query: 661 SSGARSLTYVRTEPKAADK 680
           S GARSLTYVRTEPK ADK
Sbjct: 666 SPGARSLTYVRTEPKPADK 683

[Close]

BLAST of Lcy02g004210 vs. ExPASy TrEMBL
Match: A0A6J1DFE3 (protein gar2 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111020309 PE=4 SV=1)

HSP 1 Score: 1156.0 bits (2989), Expect = 0.0e+00
Identity = 600/680 (88.24%), Postives = 633/680 (93.09%), Query Frame = 0


Query: 1   MGSEDRVDDRTFKIDFSGDGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEE 60
           MGS DRVDDRTFK+DFSG+GMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGR K+E
Sbjct: 1   MGSVDRVDDRTFKVDFSGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRSKDE 60

Query: 61  AQNELNVFLADDSHSFVSWLWDHLASSMDLYVDTPNKSSASEVPRPKSPVAEPDRRNDSR 120
           A+NELNVFLADDSHSFVSWLWDHLASSMDLYV+ P KSS +EVP P SPVAEPDRRNDS 
Sbjct: 61  AKNELNVFLADDSHSFVSWLWDHLASSMDLYVE-PTKSSVNEVPIPNSPVAEPDRRNDSH 120

Query: 121 NLESDSERGKSEKLSSRRRNREWKGISNEETRVTPRSEVSRVKHSSPEQVPSHRKRSRAD 180
           +LE DSERGKSEKLSSRRRNREWKGI+N+ETRV PRSEVSRVKHSSPEQVPSHRKRSRAD
Sbjct: 121 HLEPDSERGKSEKLSSRRRNREWKGIANDETRVPPRSEVSRVKHSSPEQVPSHRKRSRAD 180

Query: 181 DHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPLSKRLRSVVSTSNNDTTN 240
           DHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSN AKEP SKRLRSVVSTSN DTTN
Sbjct: 181 DHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNVAKEPFSKRLRSVVSTSNTDTTN 240

Query: 241 RPKRLQSVAKVPNPMATVIKAVTEAAEDVIRVKSSSVFDRLGRQSRDMDLTESSGQLAEY 300
           RP+RLQSVAKVPNPMATVIKAVTEAAED IRVKSSSVFDRLGRQS DMDLTE SGQLAEY
Sbjct: 241 RPRRLQSVAKVPNPMATVIKAVTEAAEDAIRVKSSSVFDRLGRQSHDMDLTEPSGQLAEY 300

Query: 301 GATAAEDDKYGDMNHTQDRPYSATYLERSNYSGKYTPDEAMFEAETGLASDSTSENEDVT 360
             TA ED KYGD+ HTQD+PYS TYLERSNYSGKYT +E MFE +TGLASDSTSEN+DV 
Sbjct: 301 RVTAVEDPKYGDVTHTQDQPYSGTYLERSNYSGKYTSNETMFEPDTGLASDSTSENDDVN 360

Query: 361 IQGHRVFDNSWTAESGVRKGGNLRTVPFRVVENADD-ERMTHYKQKDQPSLVANSSRDIV 420
           +QGHR FD+SWTAESGVRK GNLR+VPFRVVENAD+  R+T YKQKDQPSLVANSSRDIV
Sbjct: 361 VQGHRGFDDSWTAESGVRKVGNLRSVPFRVVENADEVTRITQYKQKDQPSLVANSSRDIV 420

Query: 421 NISVNVNTWKPPHYQGPGQIAELGGQKFLQESELQGTRSAVQVMENGEPVTIVNQQKKPA 480
           NISVNVNTWKPPHYQ PGQIAE G QKFLQESELQG+RSAVQV ENG+ VTIVNQQK PA
Sbjct: 421 NISVNVNTWKPPHYQDPGQIAEFGSQKFLQESELQGSRSAVQVTENGKAVTIVNQQKNPA 480

Query: 481 ANLEKEFQKPSLSANGQFAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVI 540
           AN +KEFQKP  SANGQFAATRPLEDADARTIFVSNVHF ATKDSLSRHFNKFGE+VKVI
Sbjct: 481 ANPQKEFQKPPSSANGQFAATRPLEDADARTIFVSNVHFGATKDSLSRHFNKFGEIVKVI 540

Query: 541 IVTDATTGQPKGSAYVEFMKKEAAENALSLDGTSFMSRILKVVRKNASQLEGASIVTWPR 600
           IVTDATTGQPKGSAYVEFM+K+AAENALSLDGTSFMSRILKV+RKNASQLEGASIVTWPR
Sbjct: 541 IVTDATTGQPKGSAYVEFMRKDAAENALSLDGTSFMSRILKVIRKNASQLEGASIVTWPR 600

Query: 601 AVRGSPFPTPRFTRVPFPRGIPGGFRPRPPIKLGARSMQWKRDSQTTTSDNGASLPGNSV 660
           AVRGSP+P+PRF+R PF RGIPGGFRPRPPIKLGARSMQWKRDSQ T++DNGASL GNS+
Sbjct: 601 AVRGSPYPSPRFSRAPFSRGIPGGFRPRPPIKLGARSMQWKRDSQATSADNGASLSGNSI 660

Query: 661 PSSGARSLTYVRTEPKAADK 680
            SSGARSLTYVRTEPK ADK
Sbjct: 661 TSSGARSLTYVRTEPKPADK 679

[Close]

BLAST of Lcy02g004210 vs. NCBI nr
Match: XP_038904558.1 (nucleolin 1 isoform X1 [Benincasa hispida])

HSP 1 Score: 1166.8 bits (3017), Expect = 0.0e+00
Identity = 602/679 (88.66%), Postives = 641/679 (94.40%), Query Frame = 0


Query: 1   MGSEDRVDDRTFKIDFSGDGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEE 60
           MGSED VDDRTFK+DF+G+GMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEE
Sbjct: 1   MGSEDPVDDRTFKVDFTGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEE 60

Query: 61  AQNELNVFLADDSHSFVSWLWDHLASSMDLYVDTPNKSSASEVPRPKSPVAEPDRRNDSR 120
           AQNELNVFLADDSHSFVSWLWDHLASSMDLYV+ P KSSA+EVPRPKSPVAEPD  N+S 
Sbjct: 61  AQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPTKSSANEVPRPKSPVAEPDTINNSH 120

Query: 121 NLESDSERGKSEKLSSRRRNREWKGISNEETRVTPRSEVSRVKHSSPEQVPSHRKRSRAD 180
           NLESDSERGKSEKLSSRRRNREW+GI+N+ETRV PRSEVSRVKHSSPEQVPSHRKRSRAD
Sbjct: 121 NLESDSERGKSEKLSSRRRNREWRGIANDETRVVPRSEVSRVKHSSPEQVPSHRKRSRAD 180

Query: 181 DHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPLSKRLRSVVSTSNNDTTN 240
           DHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPS+AAKEP SKRLRSVVSTSN+DTTN
Sbjct: 181 DHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSSAAKEPHSKRLRSVVSTSNSDTTN 240

Query: 241 RPKRLQSVAKVPNPMATVIKAVTEAAEDVIRVKSSSVFDRLGRQSRDMDLTESSGQLAEY 300
            P+RLQSVAKVPNPMATVIKAVTEAAEDV+RVKSSSVFDRLGRQSRDMDLTESSGQLAEY
Sbjct: 241 CPRRLQSVAKVPNPMATVIKAVTEAAEDVVRVKSSSVFDRLGRQSRDMDLTESSGQLAEY 300

Query: 301 GATAAEDDKYGDMNHTQDRPYSATYLERSNYSGKYTPDEAMFEAETGLASDSTSENEDVT 360
           G T+ E+DKYGDMNHT+DRPYSATYLER+NYSGKY  +EAMFE ET LASDS SENEDV 
Sbjct: 301 GVTSVENDKYGDMNHTEDRPYSATYLERNNYSGKYALNEAMFEPETELASDSASENEDVN 360

Query: 361 IQGHRVFDNSWTAESGVRKGGNLRTVPFRVVENADDERMTHYKQKDQPSLVANSSRDIVN 420
           IQGHR+F++SWTAESGVR+GGNLRTVPFR VEN+DDER+T YKQKDQPSLVANSSRDIVN
Sbjct: 361 IQGHRIFEDSWTAESGVRRGGNLRTVPFRAVENSDDERVTQYKQKDQPSLVANSSRDIVN 420

Query: 421 ISVNVNTWKPPHYQGPGQIAELGGQKFLQESELQGTRSAVQVMENGEPVTIVNQQKKPAA 480
           ISVNVNTWKPPHYQ PGQI EL GQKFLQESELQ TRSAVQVMENGEPVT+VNQ+K+PA 
Sbjct: 421 ISVNVNTWKPPHYQDPGQIPELAGQKFLQESELQRTRSAVQVMENGEPVTLVNQRKRPAP 480

Query: 481 NLEKEFQKPSLSANGQFAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVII 540
           +L+KEFQKP LSANGQF  TRPLE+ADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVII
Sbjct: 481 DLQKEFQKPPLSANGQFPGTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVII 540

Query: 541 VTDATTGQPKGSAYVEFMKKEAAENALSLDGTSFMSRILKVVRKNASQLEGASIVTWPRA 600
           VTDATTGQP+GSAYVEFM+KE+AENALSLDGTSFMSRILKVVRKNASQ+EGAS  TWPRA
Sbjct: 541 VTDATTGQPRGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNASQVEGASTATWPRA 600

Query: 601 VRGSPFPTPRFTRVPFPRGIPGGFRPRPPIKLGARSMQWKRDSQTTTSDNGASLPGNSVP 660
           VRGSPFPTPRFTRVPF RG+PGGFR R  +KLGARSMQWKRDSQTTT++ GAS  GNSVP
Sbjct: 601 VRGSPFPTPRFTRVPFMRGVPGGFRARSLMKLGARSMQWKRDSQTTTAETGASPSGNSVP 660

Query: 661 SSGARSLTYVRTEPKAADK 680
           SSGARSLTYVRTE K A+K
Sbjct: 661 SSGARSLTYVRTESKPANK 679

[Close]

BLAST of Lcy02g004210 vs. NCBI nr
Match: KAG7036580.1 (Polyadenylate-binding protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1166.4 bits (3016), Expect = 0.0e+00
Identity = 609/679 (89.69%), Postives = 639/679 (94.11%), Query Frame = 0


Query: 1   MGSEDRVDDRTFKIDFSGDGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEE 60
           MGSEDR+DDRTFK+DFSG+GM KLRERIKLKMKEFMGDYTDDTLVEYV+VLLRNGRRKEE
Sbjct: 1   MGSEDRIDDRTFKVDFSGEGMEKLRERIKLKMKEFMGDYTDDTLVEYVLVLLRNGRRKEE 60

Query: 61  AQNELNVFLADDSHSFVSWLWDHLASSMDLYVDTPNKSSASEVPRPKSPVAEPDRRNDSR 120
           AQNELNVFLADDSHSFVSWLWDHLASSM+LYV+ P KSSA EVPR KSPVAEPD    S 
Sbjct: 61  AQNELNVFLADDSHSFVSWLWDHLASSMNLYVEPPPKSSADEVPRSKSPVAEPDTGIGSH 120

Query: 121 NLESDSERGKSEKLSSRRRNREWKGISNEETRVTPRSEVSRVKHSSPEQVPSHRKRSRAD 180
           NLESD ERGKSEKLSSRRRNREWKGI+N+ETRVTPRSEVSRVKHSSPEQVP HRKRSRAD
Sbjct: 121 NLESDLERGKSEKLSSRRRNREWKGIANDETRVTPRSEVSRVKHSSPEQVPIHRKRSRAD 180

Query: 181 DHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPLSKRLRSVVSTSNNDTTN 240
           DHQG EREAAFQVSIAAPRRLLQFAMRDAVAT +PSN AKEPLSKRLRSVVSTSN+DTT+
Sbjct: 181 DHQGAEREAAFQVSIAAPRRLLQFAMRDAVATVKPSNGAKEPLSKRLRSVVSTSNSDTTS 240

Query: 241 RPKRLQSVAKVPNPMATVIKAVTEAAEDVIRVKSSSVFDRLGRQSRDMDLTESSGQLAEY 300
            P+RLQSVAKVPNPMATVIKAV+EAAEDVIRVKSSSVFDRLGRQSRD+D  ESSGQ+AEY
Sbjct: 241 HPRRLQSVAKVPNPMATVIKAVSEAAEDVIRVKSSSVFDRLGRQSRDVDSKESSGQVAEY 300

Query: 301 GATAAEDDKYGDMNHTQDRPYSATYLERSNYSGKYTPDEAMFEAETGLASDSTSENEDVT 360
           G TA ED KYGDMNHTQDRPYSATYLE SNYSGKYTP EAMF+AETGLASDSTSE+EDVT
Sbjct: 301 GVTAVEDHKYGDMNHTQDRPYSATYLESSNYSGKYTPIEAMFDAETGLASDSTSESEDVT 360

Query: 361 IQGHRVFDNSWTAESGVRKGGNLRTVPFRVVENADDERMTHYKQKDQPSLVANSSRDIVN 420
           I GH+VFD+SWTAESGVRKGGNLRT PFRVVEN DDERMT YKQK QPSLVANSSRDIVN
Sbjct: 361 ILGHKVFDDSWTAESGVRKGGNLRTAPFRVVENVDDERMTKYKQKHQPSLVANSSRDIVN 420

Query: 421 ISVNVNTWKPPHYQGPGQIAELGGQKFLQESELQGTRSAVQVMENGEPVTIVNQQKKPAA 480
           ISVNVNTWKPPHYQ PGQIAE GGQKFLQESEL+GTRSAV+V ENGEPVTIVNQQKKPAA
Sbjct: 421 ISVNVNTWKPPHYQDPGQIAESGGQKFLQESELRGTRSAVKVTENGEPVTIVNQQKKPAA 480

Query: 481 NLEKEFQKPSLSANGQFAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVII 540
           +L+KEFQKP  SANG  AATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVII
Sbjct: 481 HLQKEFQKP--SANG-LAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVII 540

Query: 541 VTDATTGQPKGSAYVEFMKKEAAENALSLDGTSFMSRILKVVRKNASQLEGASIVTWPRA 600
           VTDATTGQPKGSAYVEFM+KEAAENALSLDGTSF+SRILKV RKNASQ EGASIVTWPRA
Sbjct: 541 VTDATTGQPKGSAYVEFMRKEAAENALSLDGTSFLSRILKVARKNASQPEGASIVTWPRA 600

Query: 601 VRGSPFPTPRFTRVPFPRGIPGGFRPRPPIKLGARSMQWKRDSQTTTSDNGASLPGNSVP 660
           VRGSP+PTPRF+RVPFPRGIPGGFRPRPPIKLGARSMQWKRDSQTTT+DNGASL G SVP
Sbjct: 601 VRGSPYPTPRFSRVPFPRGIPGGFRPRPPIKLGARSMQWKRDSQTTTTDNGASLYGISVP 660

Query: 661 SSGARSLTYVRTEPKAADK 680
           S+GARSLTYVRT+PK ADK
Sbjct: 661 STGARSLTYVRTDPKPADK 676

[Close]

BLAST of Lcy02g004210 vs. NCBI nr
Match: XP_023525351.1 (nucleolin 1-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1164.1 bits (3010), Expect = 0.0e+00
Identity = 609/680 (89.56%), Postives = 639/680 (93.97%), Query Frame = 0


Query: 1   MGSEDRVDDRTFKIDFSGDGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEE 60
           MGSEDR+DDRTFK+DFSG+GM KLRERIKLKMKEFMGDYTDDTLVEYV+VLLRNGRRKEE
Sbjct: 1   MGSEDRIDDRTFKVDFSGEGMEKLRERIKLKMKEFMGDYTDDTLVEYVLVLLRNGRRKEE 60

Query: 61  AQNELNVFLADDSHSFVSWLWDHLASSMDLYVDTPNKSSASEVPRPKSPVAEPDRRNDSR 120
           AQNELNVFLADDSHSFVSWLWDHLASSM+LYV+ P KSSA EVPR KSPVAEPD    S 
Sbjct: 61  AQNELNVFLADDSHSFVSWLWDHLASSMNLYVEPPPKSSADEVPRSKSPVAEPDTGIGSH 120

Query: 121 NLESDSERGKSEKLSSRRRNREWKGISNEETRVTPRSEVSRVKHSSPEQVPSHRKRSRAD 180
           NLESD ERGKSEKLSSRRRNREWKGI+N+ETRVTPRSEVSRVKHSSPEQVPSHRKR RAD
Sbjct: 121 NLESDLERGKSEKLSSRRRNREWKGIANDETRVTPRSEVSRVKHSSPEQVPSHRKRCRAD 180

Query: 181 DHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPLSKRLRSVVSTSNNDTTN 240
           DHQG EREAAFQVSIAAPRRLLQFAMRDAVAT +PSN AKEPLSKRLRSVVSTSN+DT +
Sbjct: 181 DHQGAEREAAFQVSIAAPRRLLQFAMRDAVATVKPSNGAKEPLSKRLRSVVSTSNSDTIS 240

Query: 241 RPKRLQSVAKVPNPMATVIKAVTEAAEDVIRVKSSSVFDRLGRQSRDMDLTESSGQLAEY 300
            P+RLQS+AKVPNPMATVIKAV+EAAEDVIRVKSSSVFDRLGRQSRD+DL ESSGQ+AEY
Sbjct: 241 HPRRLQSIAKVPNPMATVIKAVSEAAEDVIRVKSSSVFDRLGRQSRDVDLKESSGQVAEY 300

Query: 301 GATAAEDDKYGDMNHTQDRPYSATYLERSNYSGKYTPDEAMFEAETGLASDSTSENEDVT 360
           G TA ED KYGDMNHTQDRPYSATYLE SNYSGKYTP EAMF+AETGLASDSTSE+EDVT
Sbjct: 301 GVTAVEDHKYGDMNHTQDRPYSATYLESSNYSGKYTPIEAMFDAETGLASDSTSESEDVT 360

Query: 361 IQGHRVFDNSWTAESGVRKGGNLRTVPFRVVENADDERMTHYKQKDQPSLVANSSRDIVN 420
           I GH+VFD+SWTAESGVRKGGNLRT PFRVVEN DDERMT YKQK QPSLVANSSRDIVN
Sbjct: 361 ILGHKVFDDSWTAESGVRKGGNLRTAPFRVVENVDDERMTKYKQKHQPSLVANSSRDIVN 420

Query: 421 ISVNVNTWKPPHYQGPGQIAELGGQKFLQESELQGTRSAVQVMENGEPVTIVNQQKKPAA 480
           ISVNVNTWKPPHYQ PGQIAE GGQKFLQESEL+GTRSAVQV ENGEPVTIVNQQKKPAA
Sbjct: 421 ISVNVNTWKPPHYQDPGQIAESGGQKFLQESELRGTRSAVQVTENGEPVTIVNQQKKPAA 480

Query: 481 NLEKEFQKPSLSANGQFAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVII 540
           +L+KEFQKP  SANG  AATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVII
Sbjct: 481 HLQKEFQKP--SANG-LAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVII 540

Query: 541 VTDATTGQPKGSAYVEFMKKEAAENALSLDGTSFMSRILKVVRKNASQLEGASIVTWPRA 600
           VTDATTGQPKGSAYVEFM+KEAAENALSLDGTSF+SRILKV RKNASQ EGASIVTWPRA
Sbjct: 541 VTDATTGQPKGSAYVEFMRKEAAENALSLDGTSFLSRILKVARKNASQPEGASIVTWPRA 600

Query: 601 VRGSPFPTPRFTRVPFPRGIPGGFRPRPPIKLGARSMQWKRDSQ-TTTSDNGASLPGNSV 660
           VRGSP+PTPRF+RVPFPRG+PGGFRPRPPIKLGARSMQWKRDSQ TTT+DNGASL G SV
Sbjct: 601 VRGSPYPTPRFSRVPFPRGVPGGFRPRPPIKLGARSMQWKRDSQTTTTTDNGASLYGISV 660

Query: 661 PSSGARSLTYVRTEPKAADK 680
           PS+GARSLTYVRTEPK ADK
Sbjct: 661 PSTGARSLTYVRTEPKPADK 677

[Close]

BLAST of Lcy02g004210 vs. NCBI nr
Match: XP_022949230.1 (nucleolin 1-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 1164.1 bits (3010), Expect = 0.0e+00
Identity = 608/679 (89.54%), Postives = 638/679 (93.96%), Query Frame = 0


Query: 1   MGSEDRVDDRTFKIDFSGDGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEE 60
           MGSEDR+DDRTFK+DFSG+GM KLRERIKLKMKEFMGDYTDDTLVEYV+VLLRNGRRKEE
Sbjct: 1   MGSEDRIDDRTFKVDFSGEGMEKLRERIKLKMKEFMGDYTDDTLVEYVLVLLRNGRRKEE 60

Query: 61  AQNELNVFLADDSHSFVSWLWDHLASSMDLYVDTPNKSSASEVPRPKSPVAEPDRRNDSR 120
           AQNELNVFLADDSHSFVSWLWDHLASSM+LYV+ P KSSA EVP  KSPVAEPD    S 
Sbjct: 61  AQNELNVFLADDSHSFVSWLWDHLASSMNLYVEPPPKSSADEVPISKSPVAEPDTGIGSH 120

Query: 121 NLESDSERGKSEKLSSRRRNREWKGISNEETRVTPRSEVSRVKHSSPEQVPSHRKRSRAD 180
           NLESD ERGKSEKLSSRRRNREWKGI+N+ETRVTPRSEVSRVKHSSPEQVPSHRKRSRAD
Sbjct: 121 NLESDLERGKSEKLSSRRRNREWKGIANDETRVTPRSEVSRVKHSSPEQVPSHRKRSRAD 180

Query: 181 DHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPLSKRLRSVVSTSNNDTTN 240
           DHQG EREAAFQVSIAAPRRLLQFAMRDAVAT +PSN AKEPLSKRLRSVVSTS +DTT+
Sbjct: 181 DHQGAEREAAFQVSIAAPRRLLQFAMRDAVATVKPSNGAKEPLSKRLRSVVSTSKSDTTS 240

Query: 241 RPKRLQSVAKVPNPMATVIKAVTEAAEDVIRVKSSSVFDRLGRQSRDMDLTESSGQLAEY 300
            P+RLQSVAKVPNPMATVIKAV+EAAEDVIRVKSSSVFDRLGRQSRD+D  ESSGQ+AEY
Sbjct: 241 HPRRLQSVAKVPNPMATVIKAVSEAAEDVIRVKSSSVFDRLGRQSRDVDSKESSGQVAEY 300

Query: 301 GATAAEDDKYGDMNHTQDRPYSATYLERSNYSGKYTPDEAMFEAETGLASDSTSENEDVT 360
           G TA ED KYGDMNHTQDRPYSATYLE SNYSGKYTP EAMF+AETGLASDSTSE+EDVT
Sbjct: 301 GVTAVEDHKYGDMNHTQDRPYSATYLESSNYSGKYTPIEAMFDAETGLASDSTSESEDVT 360

Query: 361 IQGHRVFDNSWTAESGVRKGGNLRTVPFRVVENADDERMTHYKQKDQPSLVANSSRDIVN 420
           I GH+VFD+SWTAESGVRKGGNLRT PFRVVEN DDERMT YKQK QPSLVANSSRDIVN
Sbjct: 361 ILGHKVFDDSWTAESGVRKGGNLRTAPFRVVENVDDERMTKYKQKHQPSLVANSSRDIVN 420

Query: 421 ISVNVNTWKPPHYQGPGQIAELGGQKFLQESELQGTRSAVQVMENGEPVTIVNQQKKPAA 480
           ISVNVNTWKPPHYQ PGQIAE GGQKFLQESEL+GTRSAV+V ENGEPVTIVNQQKKPAA
Sbjct: 421 ISVNVNTWKPPHYQDPGQIAESGGQKFLQESELRGTRSAVKVTENGEPVTIVNQQKKPAA 480

Query: 481 NLEKEFQKPSLSANGQFAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVII 540
           +L+KEFQKP  SANG  AATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVII
Sbjct: 481 HLQKEFQKP--SANG-LAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVII 540

Query: 541 VTDATTGQPKGSAYVEFMKKEAAENALSLDGTSFMSRILKVVRKNASQLEGASIVTWPRA 600
           VTDATTGQPKGSAYVEFM+KEAAENALSLDGTSF+SRILKV RKNASQ EGASIVTWPRA
Sbjct: 541 VTDATTGQPKGSAYVEFMRKEAAENALSLDGTSFLSRILKVARKNASQPEGASIVTWPRA 600

Query: 601 VRGSPFPTPRFTRVPFPRGIPGGFRPRPPIKLGARSMQWKRDSQTTTSDNGASLPGNSVP 660
           VRGSP+PTPRF+RVPFPRG+PGGFRPRPPIKLGARSMQWKRDSQTTT+DNGASL G SVP
Sbjct: 601 VRGSPYPTPRFSRVPFPRGVPGGFRPRPPIKLGARSMQWKRDSQTTTTDNGASLYGISVP 660

Query: 661 SSGARSLTYVRTEPKAADK 680
           S+GARSLTYVRTEPK ADK
Sbjct: 661 STGARSLTYVRTEPKPADK 676

[Close]

BLAST of Lcy02g004210 vs. NCBI nr
Match: KAG6606874.1 (Polyadenylate-binding protein 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1162.9 bits (3007), Expect = 0.0e+00
Identity = 607/679 (89.40%), Postives = 638/679 (93.96%), Query Frame = 0


Query: 1   MGSEDRVDDRTFKIDFSGDGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEE 60
           MGSEDR+DDRTFK+DFSG+GM KLRERIKLKMKEFMGDYTDDTLVEYV+VLLRNGRRKEE
Sbjct: 1   MGSEDRIDDRTFKVDFSGEGMEKLRERIKLKMKEFMGDYTDDTLVEYVLVLLRNGRRKEE 60

Query: 61  AQNELNVFLADDSHSFVSWLWDHLASSMDLYVDTPNKSSASEVPRPKSPVAEPDRRNDSR 120
           AQNELNVFLADDSHSFVSWLWDHLASSM+LYV+ P KSSA EVPR KSPVAEPD    S 
Sbjct: 61  AQNELNVFLADDSHSFVSWLWDHLASSMNLYVEPPPKSSADEVPRSKSPVAEPDTGIGSH 120

Query: 121 NLESDSERGKSEKLSSRRRNREWKGISNEETRVTPRSEVSRVKHSSPEQVPSHRKRSRAD 180
           NLESD ERGKSEKLSSRRRNREWKGI+N+ETRVTPRSEVSRVKHSSPEQVPSHRKR+RAD
Sbjct: 121 NLESDLERGKSEKLSSRRRNREWKGIANDETRVTPRSEVSRVKHSSPEQVPSHRKRNRAD 180

Query: 181 DHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPLSKRLRSVVSTSNNDTTN 240
           DHQG EREAAFQVSIAAPRRLLQFAMRDAVAT +PSN AKEPLSKRLRSVVSTSN+DTT+
Sbjct: 181 DHQGAEREAAFQVSIAAPRRLLQFAMRDAVATVKPSNGAKEPLSKRLRSVVSTSNSDTTS 240

Query: 241 RPKRLQSVAKVPNPMATVIKAVTEAAEDVIRVKSSSVFDRLGRQSRDMDLTESSGQLAEY 300
            P+RLQSVAKVPNPMATVIKAV+EAAEDVIRVKSSSVFDRLG QSRD+D  ESSGQ+AEY
Sbjct: 241 HPRRLQSVAKVPNPMATVIKAVSEAAEDVIRVKSSSVFDRLGHQSRDVDSKESSGQVAEY 300

Query: 301 GATAAEDDKYGDMNHTQDRPYSATYLERSNYSGKYTPDEAMFEAETGLASDSTSENEDVT 360
           G TA ED KYGDMNHTQDRPYSATYLE SNYSGKYTP EAMF+AETGLASDSTSE+EDVT
Sbjct: 301 GVTAVEDHKYGDMNHTQDRPYSATYLESSNYSGKYTPIEAMFDAETGLASDSTSESEDVT 360

Query: 361 IQGHRVFDNSWTAESGVRKGGNLRTVPFRVVENADDERMTHYKQKDQPSLVANSSRDIVN 420
           I GH+VFD+SWTAESGVRKGGNLRT PFRVVEN DDERMT YKQK QPSLVANSSRDIVN
Sbjct: 361 ILGHKVFDDSWTAESGVRKGGNLRTAPFRVVENVDDERMTKYKQKHQPSLVANSSRDIVN 420

Query: 421 ISVNVNTWKPPHYQGPGQIAELGGQKFLQESELQGTRSAVQVMENGEPVTIVNQQKKPAA 480
           ISVNVNTWKPPHYQ PGQIAE GGQKFLQESEL+GTRSAV+V ENGEPVTIVNQQKKPAA
Sbjct: 421 ISVNVNTWKPPHYQDPGQIAESGGQKFLQESELRGTRSAVKVTENGEPVTIVNQQKKPAA 480

Query: 481 NLEKEFQKPSLSANGQFAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVII 540
           +L+KEFQKP  SANG  AATRPLEDADARTIFVSNVHFAATK SLSRHFNKFGEVVKVII
Sbjct: 481 HLQKEFQKP--SANG-LAATRPLEDADARTIFVSNVHFAATKGSLSRHFNKFGEVVKVII 540

Query: 541 VTDATTGQPKGSAYVEFMKKEAAENALSLDGTSFMSRILKVVRKNASQLEGASIVTWPRA 600
           VTDATTGQPKGSAYVEFM+KEAAENALSLDGTSF+SRILKV RKNASQ EGASIVTWPRA
Sbjct: 541 VTDATTGQPKGSAYVEFMRKEAAENALSLDGTSFLSRILKVARKNASQPEGASIVTWPRA 600

Query: 601 VRGSPFPTPRFTRVPFPRGIPGGFRPRPPIKLGARSMQWKRDSQTTTSDNGASLPGNSVP 660
           VRGSP+PTPRF+RVPFPRGIPGGFRPRPPIKLGARSMQWKRDSQTTT+DNGASL G SVP
Sbjct: 601 VRGSPYPTPRFSRVPFPRGIPGGFRPRPPIKLGARSMQWKRDSQTTTTDNGASLYGISVP 660

Query: 661 SSGARSLTYVRTEPKAADK 680
           S+GARSLTYVRT+PK ADK
Sbjct: 661 STGARSLTYVRTDPKPADK 676

[Close]

BLAST of Lcy02g004210 vs. TAIR 10
Match: AT3G12640.1 (RNA binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 429.5 bits (1103), Expect = 5.1e-120
Identity = 303/691 (43.85%), Postives = 407/691 (58.90%), Query Frame = 0


Query: 1   MGSEDRVDDRTFKIDFSGDGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEE 60
           MGS D VDDRTF  DFS +G+AKL+E +K K+KE+MGDYTDD LVEYVIVLLRNGRRKEE
Sbjct: 1   MGSADLVDDRTFNGDFSVEGVAKLKEMVKDKLKEYMGDYTDDILVEYVIVLLRNGRRKEE 60

Query: 61  AQNELNVFLADDSHSFVSWLWDHLASSMDLYVDTPNKSSASEVPRPKSPVAEPDRRNDSR 120
           A NEL +FL DDS SFV+WLWDHLA S+D Y      SS  E    KS +          
Sbjct: 61  ANNELKIFLGDDSDSFVAWLWDHLAESVDEYF-----SSNVEGTTIKSSLISSHEDKALV 120

Query: 121 NLESDSERGKSEKLSSRRRNREWKGISNEETRVTPRSEVSRVKHSSPEQVPSHRKRSRAD 180
            L+S+ ++G+S+K +  RR R+W+         +  + VS +      +  S RKRSR D
Sbjct: 121 PLDSEYDKGRSDKSNGARRGRQWR---------SQPTNVSEIPPLLSSEAQSQRKRSRTD 180

Query: 181 DHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPLSKRLRSVVSTS--NNDT 240
           D +  +REA   VS    RRLLQFA+RDA+A +RP+N++ E   KRLRSVVSTS  N+  
Sbjct: 181 DSRNEQREAKPDVS----RRLLQFAVRDALAISRPANSSTESSLKRLRSVVSTSTQNSSD 240

Query: 241 TNRPKRLQSVAKVPNPMATVIKAVTEAAEDVIRVKSS-SVFDRLGRQ--SRDMDLTESSG 300
            +  ++++SVA+V NPMATV+KAV EAAED  + KS  SVFDR+     S  +D     G
Sbjct: 241 PDPARKIRSVARVVNPMATVMKAVAEAAEDAKKPKSGRSVFDRISHSTGSETLDQNMVLG 300

Query: 301 QLA---EYGATAAEDDKYGDMNHTQDRPYSATYLER--SNYSGKYTPDEAMFEAETGLAS 360
           +++   E     ++  +   + +TQ    +  Y E   +N +G   PD   F ++ G   
Sbjct: 301 EVSPKDEESRNFSQGQEAVQLQYTQSLANNGVYFENMTTNDTG-LNPD---FSSDRGRLG 360

Query: 361 DSTSENEDVTIQGHRVFDNSWTAESGVRKGGNLRTVPFRVVENADDERMTHYKQKDQPSL 420
            S + +   T  G+R+               N  ++  R+V+++   + T+Y Q   P +
Sbjct: 361 SSVNVSHPSTYLGNRI--------------NNPNSLQHRLVDDSKRVKGTNY-QNRLPEV 420

Query: 421 VANSSRDIVNISVNVNTWKPPHYQGPGQIAELGGQKFLQESELQGTRSAVQVMEN---GE 480
              +     + S N++T K    +   +I ++G Q+++ E  L  + +  Q+      G+
Sbjct: 421 A--TKHKTASFSGNIDTGKTVKLEEQRKIPDVGLQRYMDEGRLVSSEATTQLSTQKILGD 480

Query: 481 PVTIVNQQKKPAANLEKEFQKPSLSANGQFAATRPLEDADARTIFVSNVHFAATKDSLSR 540
             TI N   KPAA++ KE    + S  G  + TRPLEDA +RTIFV+NVHF ATKDSLSR
Sbjct: 481 --TIGNGNVKPAASV-KEESTTNKSVPGTLSTTRPLEDASSRTIFVANVHFGATKDSLSR 540

Query: 541 HFNKFGEVVKVIIVTDATTGQPKGSAYVEFMKKEAAENALSLDGTSFMSRILKVVR-KNA 600
           HFNKFGEV+K  IVTD  TGQP GSAY+EF +KEAAENALSLDGTSFMSRILK+V+  N 
Sbjct: 541 HFNKFGEVLKAFIVTDPATGQPSGSAYIEFTRKEAAENALSLDGTSFMSRILKIVKGSNG 600

Query: 601 SQLEGASIVTWPRAVRGSPFPTPRFTRVP-FPRGIPGGFRPRPPIKLGARSMQWKRDSQT 660
              E AS ++W R          RFTR P + RG  G  R R  ++ G RSMQWKRDS  
Sbjct: 601 QNQEAASSMSWSRG--------GRFTRAPSYFRG--GAVRGRSVVRGGGRSMQWKRDSAD 632

Query: 661 TTSDNGASLPGNSVPSSGARSLTYVRTEPKA 677
           T ++       N+V  + ARSLTYVR E K+
Sbjct: 661 TGNN-------NNVAPNNARSLTYVRAESKS 632

[Close]

BLAST of Lcy02g004210 vs. TAIR 10
Match: AT2G24350.1 (RNA binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 83.2 bits (204), Expect = 8.9e-16
Identity = 155/604 (25.66%), Postives = 247/604 (40.89%), Query Frame = 0


Query: 7   VDDRTFKIDFSGDGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEEAQNELN 66
           VD  TF +    +  ++L+  I   +  F  DY+DD L EYV VL+ NG+ + +A  +L 
Sbjct: 5   VDGLTFPMSRVSESASRLKTIISDMLPRFTDDYSDD-LSEYVTVLVCNGKSQRQASEDLE 64

Query: 67  VFLADDSHSFVSWLWDHLASSMDLYVDTPNKSSASEVPRPKSPV-----------AEPDR 126
            FL + S  FV  LW+ L      Y    N +S      PK+ V               R
Sbjct: 65  AFLKEQSWKFVVCLWELLVK----YFSQSNSASG-----PKTDVDFGSNDTLIKQGLSSR 124

Query: 127 RNDSRNLE-SDSERGKSEKLSSRRRNREWKGISNEETRVTPRSEVSRVKHSSPEQVPSHR 186
           + D  + + +D     +E+L S         I + E  V+P+  V ++K S  E + S  
Sbjct: 125 KYDDYDCKAADGTNSMNEQLIS-----VTAPIDDIEAPVSPK--VEKMKMSRQELIDSPC 184

Query: 187 KRSRADDHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPLSKRLRSVVSTS 246
            R+R        R+     S    R++L+  +  A       N AK   S   RS     
Sbjct: 185 TRAR-------RRKKENWNSSGYSRKVLRSVIVSATQQPCDRNPAKYEKSMNERS----- 244

Query: 247 NNDTTNRPKRLQSVAKVPNPMATVIKAVTEAAEDVIRVKSS----SVFDRLGRQSRDMDL 306
               T + +      ++ +  A   +AV+    D    + +    SV+DRLGR S +  L
Sbjct: 245 ---RTLKKRPYSPERELDSRFAPSGRAVSARYHDASLHQETEPHVSVWDRLGRASSECVL 304

Query: 307 TESSGQLAEYGATAAEDDKYGDMNHTQDRPYSATYLE---RSNYSGKYTPDEAMFEAETG 366
              S  L+++G    E   +          YS  + E   R   +  Y      F+ +  
Sbjct: 305 DTESRTLSKFGIQTRETKVHQQHGPVFPAAYSEQHSEIFQREVLAVGYRHRVPQFDKDRK 364

Query: 367 LASDSTSENEDVTIQGHRVFDNSWTAESGV--RKGGNLRTVPFRVVENADDERMTHYKQK 426
             S++ +  E      H  ++ S     G+     G    VP              YKQ 
Sbjct: 365 PKSETITSTEP-----HIAYNLSRKRRYGMVSPNSGEFSYVP-------------QYKQA 424

Query: 427 DQ----PSLVANSS--RDIVNISVNVNTWKPPHYQGPGQIAELGGQKFLQESELQGTRSA 486
           +Q    PSL+++ S  +DI                                SE++  +  
Sbjct: 425 EQDFEKPSLLSHQSTKQDIF-------------------------------SEIKNVKEK 484

Query: 487 VQVMENGEPVTIVNQQKKPAANLEKEFQKPSLSANGQFAATRPLED-ADARTIFVSNVHF 546
           +Q +E    + I+  Q K     + E +KPS     Q   ++  ED +++R I V+NV++
Sbjct: 485 MQELE----LRII--QSKQLKKQKVEERKPS----PQSGESQYQEDVSESRVIHVTNVYY 517

Query: 547 AATKDSLSRHF-NKFGEVVKVIIVTDATTGQPKGSAYVEFMKKEAAENALSLDGTSFMSR 582
           AA K+++S  F +K G V  VI+VTD  T  PKG+A+V F  KE+   A++L GT F SR
Sbjct: 545 AAKKEAISMFFSSKCGAVQNVIVVTDPVTRHPKGTAFVTFATKESVGKAVALSGTMFYSR 517

[Close]

BLAST of Lcy02g004210 vs. TAIR 10
Match: AT5G65260.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 74.3 bits (181), Expect = 4.1e-13
Identity = 46/110 (41.82%), Postives = 65/110 (59.09%), Query Frame = 0


Query: 480 ANLEKEF--QKPSLSANGQFAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVK 539
           A +EKE   Q P+  A  Q       E+ DAR++FV NV +A T + + +HF   G V +
Sbjct: 65  AKVEKEMGAQDPASIAANQAGK----EEVDARSVFVGNVDYACTPEEVQQHFQTCGTVHR 124

Query: 540 VIIVTDATTGQPKGSAYVEFMKKEAAENALSLDGTSFMSRILKVVRKNAS 588
           V I+TD   GQPKG AYVEF++ EA + AL L+ +    R LKV++K  +
Sbjct: 125 VTILTD-KFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQLKVLQKRTN 169

[Close]

BLAST of Lcy02g004210 vs. TAIR 10
Match: AT5G51120.2 (polyadenylate-binding protein 1 )

HSP 1 Score: 72.0 bits (175), Expect = 2.1e-12
Identity = 43/106 (40.57%), Postives = 67/106 (63.21%), Query Frame = 0


Query: 482 LEKEFQKPSLSANGQFAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVIIV 541
           LE E++K  ++ +G  AA +  E+ D+R+I+V NV +A T + + +HF   G V +V I+
Sbjct: 117 LEFEYEKEIIN-SGVSAAEK--EEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTIL 176

Query: 542 TDATTGQPKGSAYVEFMKKEAAENALSLDGTSFMSRILKVVRKNAS 588
           TD   GQPKG AYVEF++ EA +N+L L+ +    R +KV  K  +
Sbjct: 177 TD-KFGQPKGFAYVEFVEVEAVQNSLILNESELHGRQIKVSAKRTN 218

[Close]

BLAST of Lcy02g004210 vs. TAIR 10
Match: AT5G51120.1 (polyadenylate-binding protein 1 )

HSP 1 Score: 70.9 bits (172), Expect = 4.6e-12
Identity = 42/108 (38.89%), Postives = 63/108 (58.33%), Query Frame = 0


Query: 480 ANLEKEFQKPSLSANGQFAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVI 539
           A  EK+       + G  AA +  E+ D+R+I+V NV +A T + + +HF   G V +V 
Sbjct: 76  AKAEKDMGASQDPSGGVSAAEK--EEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVT 135

Query: 540 IVTDATTGQPKGSAYVEFMKKEAAENALSLDGTSFMSRILKVVRKNAS 588
           I+TD   GQPKG AYVEF++ EA +N+L L+ +    R +KV  K  +
Sbjct: 136 ILTD-KFGQPKGFAYVEFVEVEAVQNSLILNESELHGRQIKVSAKRTN 180

The following BLAST results are available for this feature:

BLAST of Lcy02g004210 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9DDY9	1.6e-14	33.12	Polyadenylate-binding protein 2-A OS=Xenopus laevis OX=8355 GN=pabpn1-a PE=2 SV=...	[more]
Q7ZXB8	1.6e-14	33.12	Polyadenylate-binding protein 2-B OS=Xenopus laevis OX=8355 GN=pabpn1-b PE=2 SV=...	[more]
Q6NVP7	2.1e-14	33.12	Polyadenylate-binding protein 2 OS=Xenopus tropicalis OX=8364 GN=pabpn1 PE=2 SV=...	[more]
Q86U42	4.0e-13	30.05	Polyadenylate-binding protein 2 OS=Homo sapiens OX=9606 GN=PABPN1 PE=1 SV=3	[more]
Q8CCS6	5.3e-13	30.05	Polyadenylate-binding protein 2 OS=Mus musculus OX=10090 GN=Pabpn1 PE=1 SV=3	[more]

BLAST of Lcy02g004210 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GC70	0.0e+00	89.54	nucleolin 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111452645 PE=4 S...	[more]
A0A6J1KE94	0.0e+00	89.40	uncharacterized protein LOC111493050 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A5A7U3W4	0.0e+00	87.92	Nucleolin 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2...	[more]
A0A1S3CFE4	0.0e+00	87.92	nucleolin 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500309 PE=4 SV=1	[more]
A0A6J1DFE3	0.0e+00	88.24	protein gar2 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111020309 PE=4 SV=1	[more]

BLAST of Lcy02g004210 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038904558.1	0.0e+00	88.66	nucleolin 1 isoform X1 [Benincasa hispida]	[more]
KAG7036580.1	0.0e+00	89.69	Polyadenylate-binding protein 2, partial [Cucurbita argyrosperma subsp. argyrosp...	[more]
XP_023525351.1	0.0e+00	89.56	nucleolin 1-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022949230.1	0.0e+00	89.54	nucleolin 1-like isoform X1 [Cucurbita moschata]	[more]
KAG6606874.1	0.0e+00	89.40	Polyadenylate-binding protein 2, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Lcy02g004210 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G12640.1	5.1e-120	43.85	RNA binding (RRM/RBD/RNP motifs) family protein	[more]
AT2G24350.1	8.9e-16	25.66	RNA binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G65260.1	4.1e-13	41.82	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G51120.2	2.1e-12	40.57	polyadenylate-binding protein 1	[more]
AT5G51120.1	4.6e-12	38.89	polyadenylate-binding protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 510..582 e-value: 1.8E-21 score: 87.3
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 511..579 e-value: 9.1E-18 score: 63.9
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 509..586 score: 17.182348
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 456..590 e-value: 8.8E-25 score: 89.5
IPR002483	PWI domain	PFAM	PF01480	PWI	coord: 24..87 e-value: 2.4E-7 score: 30.9
None	No IPR available	GENE3D	1.20.1390.10	PWI domain	coord: 12..91 e-value: 3.7E-10 score: 41.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 95..192
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 612..679
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 227..241
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 108..187
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 638..668
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 213..241
None	No IPR available	PANTHER	PTHR14738:SF32	RNA BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN	coord: 5..675
IPR040366	Nuclear polyadenylated RNA-binding protein Nab2/ZC3H14	PANTHER	PTHR14738	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 14	coord: 5..675
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 502..583

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy02g004210.1	Lcy02g004210.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1900364	negative regulation of mRNA polyadenylation
biological_process	GO:0043488	regulation of mRNA stability
biological_process	GO:0006397	mRNA processing
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0008143	poly(A) binding
molecular_function	GO:0003676	nucleic acid binding