Lcy02g003990 (gene) Sponge gourd (P93075) v1

Overview
NameLcy02g003990
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionRibosomal protein
LocationChr02: 5275896 .. 5279546 (+)
RNA-Seq ExpressionLcy02g003990
SyntenyLcy02g003990
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AATGACCACAAAAATCCCAAAATCCAACCAAAAAAAAAAAAAAATGTCCTCATTTGTATTTCTTATCATCTCCACATTCTATGGATAGAGAAACCCATTTCCAAATCCAAATCCAAAACCCCCACTTCATGAGGTAGAAGAAGAACCTCGCAATTCCACTCTCCATCAATGGCGGCCTGTACTTCCACTTCTCCTTCTTCCCTTATGCTCACATCCGCTTCTTCTTCTGTCCACCCTCAAGACCTCGCTTCCTCCATCGTTTCTTTCAAGGGGAAGCCCCAATTCTCCACCATCAAATCCTTCTCCTCCTGCCATTTCCTCTGCAAGCCAAGCAGATCGGTCGATTGGGTCTTCCTTAATTTTCAGAGACGAGCCAGGCACCATGTGATCGTCGCTGCTCTCGCCGCCGAAGCGGATGTTGCCGAGGCGGAGGCCGAGGAAGAGGAGGGGGTCGGCGGGGTGGCGACGGCTACCGTCGCTGCGCCTAAACCCAAGAAGGGTAAAGCCGCGTTGCCCCTTAAAAGAGATAGGGTATGCTCCAAAACCTTTTAATGTTTTGGTTTGGATTATGGGTTTTGTTTTGAGGGGCTTGTTTTCAAGGTTGGGAATGGAGGGTATTTCTTTTCTGGTTGTTGTTGAAATGGTTGTGGTGGAGTTTTGATTGGTGGATTGATCATTGAATGTCAATCTCAATGTGTACTAGTTTAGGCCTGAAGTTTAAAGTTGGCTTCTGTTTGCATGGCTTGTGCTTGAGGAGCTTGGTTTTCATGTTTAGAAATAGTGGATGTTTCCCTTTAGGTTGTTTTATTATGGTTGTGGTGGACTTTTGGGTATGTTGATATGTGTACTAGTGTAAGCCTGAAGTTTAAACTTGGCTTCATTTTCTCTGTCTTTCCCCATATCCTTATTTCATGATTGATGTCTGAATTCAATTTGTTGTGTATTATGTCAGAGGAGATCCAAGAGATTCTTGGAAATTCAAAAACTGAGGGAAAACAAAAAAGAGTATGACATCAAGACAGCAATATCTCTGCTCAAGGAAATGGCTAGCACAAAGTTTGTGGAAACAGCTGAAGCCCATTTCCGGCTCAACATTGATCCCAAATACAATGATCAACAGCTGAGAGCAACCGTGAGTTTTGTTTTGTAAATCATATTGTTGAGGGAAGTTACAAGGAATATGCATATCACGAGGTTACTCTGTCTGAATGCTTTGATGCAGGTTAATCTGCCTAAAGGAACTGGACAAACAGTCAGAGTTGCTGTTCTTACTCAAGGTAACTACTTTTAATACTTAAGCAGCTCTCTCATCAACTTTGATACACAATGGGCTGTAACAGTGTTTCTTATGCTATATGATCACGAATTCTTTCTAGATCCACAAAGTTGAGTCTTTGTATAAGGGCATGAGAATGGTTTTAGTTTTATCATTTATGTTACTTAAAAGTTTTTCCTTGTTTGCATTTACTATATTTTCATGGATGACTTTGACTTGATTGTTTAAAAAAAATGAAGTCATTCTTCTCTTTGAAGTAAGATGTTTCTGAATAATAACTTTAATATGCACGATAATACTAATCTTTACAAGCCGTCTGATCATAGTTCTTCAACCCTAAACTATCTTGATTCGAAATAAGAAACTTTCTGGAGTCATCTTCATGTTGAACTCTATGCTAAGTTTCGTAGTAGAGATTCTACCATAATTTGAAGTTTTCACAATCTAGCCGAGGTCCATATCTAGAATAGGGTTAGTCCAGTCATGGTGCTTCGGCTCTTGGTCGAACCAAATAGTAGGTTTTTATGCATCTAGGTTAATTCTTCTTGAATGGTTGCTTGTTAAAATAACTTTACTGTTTAGGGTGCAATTCTGAAAAGCTGAAATAAATATACAGGTGAGAGATTCGACGAAGCAAAAAATGCTGGAGCAGATTTAGTTGGTGGGGAGGACTTGATAGAACAGATAAAAGGAGGATTTATGGATTTCGACAAATTGATTGCTTCCCCAGACATGATGCCTAAGGTATTGTTCTGACTACACTACTTCAATCATTCATTCATTTATTTTTTGATATTTTTGTAATTTTCACTACATATAAATTGTTATCCTAAAAAAGTTGCATAACTTACAAAAAAAGAAAAAAGTTTTCCTTAACAAGTTGCATAGCTTTAAAAGTTTAATTATAGATGATCCTGTTTATGTAATGTAAAAAGAAAATGAGAGACTTCTCAAAGAAAAAAAAAACAAAAAGCAAATGAGAGACATGAACATCGACTTAGTAATTACCCTGGGTTTATAGATCCATTTTTGGTCATAGATATACTTCCTAGACTTTGTTGATCAAAGTGCTTGCCTTATGGCTGAAGCCAAATTTGAATCATTTTCTAAAATTTTCAAGAAGTCTCTGTATACGTGTTTTCTGGCCTTGTCGATTTATCATCGGGTGAAACGCCAATTACCTGCATTACTATAATGATATTGTTGATTTCCATATTTGAGTCTTCTATGGTCGTTTCAGGTTGCTAGCCTTGGGAAGCTCCTTGGACCACGTGGACTCATGCCAAATCCAAAAGCCGGTACCGTGGCAACCAATTTACCTCAGGTATTAATAGTCTTCTTTTGGCACCTTTAGTGCATCCAGATTTCCTGTCCATCCACTAGAAAATAAATTTAAGACTTTATATAAAGCATCGGGCAACCTTGATTTCAGGCAATAGCAGAATTCAAGCAGGGAAAAGTTGAATACAGAGCAGATAAAACCGGGATAGTTCACTTACCGTTTGGAAAAGCTGACTTCAGTGAAGAAGACCTTCTCATAAACTTGCTTGCTGCCATAGTATGTTCTTCCCTTCTTCTCTCTGCAGCTGTTAGTCTCTGGAAACACGTTTTGCTCATTTCGATAAGTCATTTTCTTCTAACCATGACAGAAATCAGTTGAAACCAATAAGCCAACAGGTGCAAAAGGTGTATACTGGAAGAGTGCTCACATATGCTCGTCGATGGGGCCTTCAATTCGGTTAAATATAAGAGAGATGCTGGACTTCAAGCTTCCCTCGAGCGCTTGACGAATAACAAACCTGTAAATTTCTTCTGTTTGTTGAATCAGCCTCTGGGGGGAATCCACTGGAATATAATGCCCAAATGTGAGCAGCATTGGAGAAAGTGAAGGTGATAGAAGAAACTAGGATGAAGAGTGAGGAGACATCAGATAATTATGATTACACAGAAACAAGCATACTGCAAGTCTTCTATACTGACTCAGTCACTTTGTATTAATGGTGTTAAGTTCTTGTTGATCTAATACACTTTGATTGACCTCTTGGGTTTTAAGAGAAAAAAATGATGAATGTACTGAAATGTATTAACCAGTTGCTGCCCTTTTCTGTGGGCCATTTCGAAAGTGGTTGTTCGTGTTGGTTCGTCGTAAAGGGGCGTATCGTACAGTTCAATTACTTTAAGTTTCACCATTTCCATTTCTATGCCTAGGAGGATATTTTGATATGCAAATATGGATGATAGATGTATCAAGATCCAGAATTGTATTCATGTTTAGGATTTTTTTAATTTGTAAATATGTACTCATAGCTCTTTTTTAGCAACCATATTCTCAAGCTTCTCATTCTAATATCTCAAAATAACACATGAAACTCTTT

mRNA sequence

AATGACCACAAAAATCCCAAAATCCAACCAAAAAAAAAAAAAAATGTCCTCATTTGTATTTCTTATCATCTCCACATTCTATGGATAGAGAAACCCATTTCCAAATCCAAATCCAAAACCCCCACTTCATGAGGTAGAAGAAGAACCTCGCAATTCCACTCTCCATCAATGGCGGCCTGTACTTCCACTTCTCCTTCTTCCCTTATGCTCACATCCGCTTCTTCTTCTGTCCACCCTCAAGACCTCGCTTCCTCCATCGTTTCTTTCAAGGGGAAGCCCCAATTCTCCACCATCAAATCCTTCTCCTCCTGCCATTTCCTCTGCAAGCCAAGCAGATCGGTCGATTGGGTCTTCCTTAATTTTCAGAGACGAGCCAGGCACCATGTGATCGTCGCTGCTCTCGCCGCCGAAGCGGATGTTGCCGAGGCGGAGGCCGAGGAAGAGGAGGGGGTCGGCGGGGTGGCGACGGCTACCGTCGCTGCGCCTAAACCCAAGAAGGGTAAAGCCGCGTTGCCCCTTAAAAGAGATAGGAGGAGATCCAAGAGATTCTTGGAAATTCAAAAACTGAGGGAAAACAAAAAAGAGTATGACATCAAGACAGCAATATCTCTGCTCAAGGAAATGGCTAGCACAAAGTTTGTGGAAACAGCTGAAGCCCATTTCCGGCTCAACATTGATCCCAAATACAATGATCAACAGCTGAGAGCAACCGTTAATCTGCCTAAAGGAACTGGACAAACAGTCAGAGTTGCTGTTCTTACTCAAGGTGAGAGATTCGACGAAGCAAAAAATGCTGGAGCAGATTTAGTTGGTGGGGAGGACTTGATAGAACAGATAAAAGGAGGATTTATGGATTTCGACAAATTGATTGCTTCCCCAGACATGATGCCTAAGGTTGCTAGCCTTGGGAAGCTCCTTGGACCACGTGGACTCATGCCAAATCCAAAAGCCGGTACCGTGGCAACCAATTTACCTCAGGCAATAGCAGAATTCAAGCAGGGAAAAGTTGAATACAGAGCAGATAAAACCGGGATAGTTCACTTACCGTTTGGAAAAGCTGACTTCAGTGAAGAAGACCTTCTCATAAACTTGCTTGCTGCCATAAAATCAGTTGAAACCAATAAGCCAACAGGTGCAAAAGGTGTATACTGGAAGAGTGCTCACATATGCTCGTCGATGGGGCCTTCAATTCGGTTAAATATAAGAGAGATGCTGGACTTCAAGCTTCCCTCGAGCGCTTGACGAATAACAAACCTGTAAATTTCTTCTGTTTGTTGAATCAGCCTCTGGGGGGAATCCACTGGAATATAATGCCCAAATGTGAGCAGCATTGGAGAAAGTGAAGGTGATAGAAGAAACTAGGATGAAGAGTGAGGAGACATCAGATAATTATGATTACACAGAAACAAGCATACTGCAAGTCTTCTATACTGACTCAGTCACTTTGTATTAATGGTGTTAAGTTCTTGTTGATCTAATACACTTTGATTGACCTCTTGGGTTTTAAGAGAAAAAAATGATGAATGTACTGAAATGTATTAACCAGTTGCTGCCCTTTTCTGTGGGCCATTTCGAAAGTGGTTGTTCGTGTTGGTTCGTCGTAAAGGGGCGTATCGTACAGTTCAATTACTTTAAGTTTCACCATTTCCATTTCTATGCCTAGGAGGATATTTTGATATGCAAATATGGATGATAGATGTATCAAGATCCAGAATTGTATTCATGTTTAGGATTTTTTTAATTTGTAAATATGTACTCATAGCTCTTTTTTAGCAACCATATTCTCAAGCTTCTCATTCTAATATCTCAAAATAACACATGAAACTCTTT

Coding sequence (CDS)

ATGGCGGCCTGTACTTCCACTTCTCCTTCTTCCCTTATGCTCACATCCGCTTCTTCTTCTGTCCACCCTCAAGACCTCGCTTCCTCCATCGTTTCTTTCAAGGGGAAGCCCCAATTCTCCACCATCAAATCCTTCTCCTCCTGCCATTTCCTCTGCAAGCCAAGCAGATCGGTCGATTGGGTCTTCCTTAATTTTCAGAGACGAGCCAGGCACCATGTGATCGTCGCTGCTCTCGCCGCCGAAGCGGATGTTGCCGAGGCGGAGGCCGAGGAAGAGGAGGGGGTCGGCGGGGTGGCGACGGCTACCGTCGCTGCGCCTAAACCCAAGAAGGGTAAAGCCGCGTTGCCCCTTAAAAGAGATAGGAGGAGATCCAAGAGATTCTTGGAAATTCAAAAACTGAGGGAAAACAAAAAAGAGTATGACATCAAGACAGCAATATCTCTGCTCAAGGAAATGGCTAGCACAAAGTTTGTGGAAACAGCTGAAGCCCATTTCCGGCTCAACATTGATCCCAAATACAATGATCAACAGCTGAGAGCAACCGTTAATCTGCCTAAAGGAACTGGACAAACAGTCAGAGTTGCTGTTCTTACTCAAGGTGAGAGATTCGACGAAGCAAAAAATGCTGGAGCAGATTTAGTTGGTGGGGAGGACTTGATAGAACAGATAAAAGGAGGATTTATGGATTTCGACAAATTGATTGCTTCCCCAGACATGATGCCTAAGGTTGCTAGCCTTGGGAAGCTCCTTGGACCACGTGGACTCATGCCAAATCCAAAAGCCGGTACCGTGGCAACCAATTTACCTCAGGCAATAGCAGAATTCAAGCAGGGAAAAGTTGAATACAGAGCAGATAAAACCGGGATAGTTCACTTACCGTTTGGAAAAGCTGACTTCAGTGAAGAAGACCTTCTCATAAACTTGCTTGCTGCCATAAAATCAGTTGAAACCAATAAGCCAACAGGTGCAAAAGGTGTATACTGGAAGAGTGCTCACATATGCTCGTCGATGGGGCCTTCAATTCGGTTAAATATAAGAGAGATGCTGGACTTCAAGCTTCCCTCGAGCGCTTGA

Protein sequence

MAACTSTSPSSLMLTSASSSVHPQDLASSIVSFKGKPQFSTIKSFSSCHFLCKPSRSVDWVFLNFQRRARHHVIVAALAAEADVAEAEAEEEEGVGGVATATVAAPKPKKGKAALPLKRDRRRSKRFLEIQKLRENKKEYDIKTAISLLKEMASTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVRVAVLTQGERFDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGKADFSEEDLLINLLAAIKSVETNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDFKLPSSA
Homology
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BLAST of Lcy02g003990 vs. ExPASy Swiss-Prot
Match: Q9LY66 (50S ribosomal protein L1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL1 PE=1 SV=1)

HSP 1 Score: 441.4 bits (1134), Expect = 9.5e-123
Identity = 243/356 (68.26%), Postives = 280/356 (78.65%), Query Frame = 0 

Query: 1   MAACTSTSPSSLMLTSASSSVHPQDLASSIVSFKGKPQFSTIKSFSSCHFLCKPSRSVDW 60
           MAAC   + SSLML  A++S   QDL  +   F     F++ +       L     S D 
Sbjct: 1   MAAC--ATHSSLMLAYAAASTRSQDLTPTPSLF----SFASSRPNHLSFPLLLLGGSRDR 60

Query: 61  VFLNFQRRARHHVIVAALAAEADVAEAEAEEEEGVGGVATATVAAPKPKKGKAALPLKRD 120
                 R + H  IV+A+AAEAD+     + EE +   ATA +  PKPKKGKAAL LKRD
Sbjct: 61  RCAAIDRASNHKFIVSAVAAEADL-----DTEEDLEQTATAVLDPPKPKKGKAALVLKRD 120

Query: 121 RRRSKRFLEIQKLRENKKEYDIKTAISLLKEMASTKFVETAEAHFRLNIDPKYNDQQLRA 180
           R RSKRFLEIQKLRE KKEYD+ TAISLLK+ A+T+FVE+ EAHFRLNIDPKYNDQQLRA
Sbjct: 121 RTRSKRFLEIQKLRETKKEYDVNTAISLLKQTANTRFVESVEAHFRLNIDPKYNDQQLRA 180

Query: 181 TVNLPKGTGQTVRVAVLTQGERFDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIASPDMM 240
           TV+LPKGTGQTV VAVL QGE+ DEAK+AGAD+VG +DLIEQIKGGFM+FDKLIASPDMM
Sbjct: 181 TVSLPKGTGQTVIVAVLAQGEKVDEAKSAGADIVGSDDLIEQIKGGFMEFDKLIASPDMM 240

Query: 241 PKVASLGKLLGPRGLMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGKADFS 300
            KVA LGK+LGPRGLMPNPKAGTV  N+PQAI EFK+GKVE+RADKTGIVH+PFGK +F+
Sbjct: 241 VKVAGLGKILGPRGLMPNPKAGTVTANIPQAIEEFKKGKVEFRADKTGIVHIPFGKVNFT 300

Query: 301 EEDLLINLLAAIKSVETNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDFKLPSS 357
           EEDLLIN LAA+KSVETNKP GAKGVYWKSAHICSSMGPSI+LNIREM+DFK P++
Sbjct: 301 EEDLLINFLAAVKSVETNKPKGAKGVYWKSAHICSSMGPSIKLNIREMIDFKPPTA 345

[Close]
BLAST of Lcy02g003990 vs. ExPASy Swiss-Prot
Match: Q9LE95 (50S ribosomal protein L1, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL1 PE=1 SV=1)

HSP 1 Score: 433.3 bits (1113), Expect = 2.6e-120
Identity = 244/357 (68.35%), Postives = 284/357 (79.55%), Query Frame = 0 

Query: 6   STSPSSLMLTSASSSVHPQDLASSIVSFKGKPQFSTIKSFSSCHF-LCKPSRS-VDWVFL 65
           + +P SL L  ASSS   Q   S    FK       + + S C   L +  RS + WV  
Sbjct: 3   TAAPPSLSLCYASSSFQYQQDPSFQTHFK-----PLLLNSSLCRLTLNQRERSCLKWVDF 62

Query: 66  NFQRRARHHV---IVAALAAEADVAEAEAEEEEGVGGVATATVAAPKPKKGKAALPLKRD 125
             Q+++   V   ++AA+AAEA+VA+ E EE E  GGVAT   +  KPKKGKAALPLK D
Sbjct: 63  TSQKQSPKSVSFRVLAAVAAEAEVADMEEEEGES-GGVATLP-SPTKPKKGKAALPLKSD 122

Query: 126 RRRSKRFLEIQKLRENKKEYDIKTAISLLKEMASTKFVETAEAHFRLNIDPKYNDQQLRA 185
           R RSKRFLEIQKLRE K+EYD+KTA+SL+K+M+STKFVETAEAHFRLNIDPKYNDQQLRA
Sbjct: 123 RTRSKRFLEIQKLREIKQEYDLKTALSLMKQMSSTKFVETAEAHFRLNIDPKYNDQQLRA 182

Query: 186 TVNLPKGTGQTVRVAVLTQGERFDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIASPDMM 245
           TV+LPKGTG+TV++AVL QG++ DEAK AGAD+VGGE+LIEQIKGGFMDFDKLIA+ DMM
Sbjct: 183 TVSLPKGTGKTVKIAVLAQGDKIDEAKAAGADIVGGEELIEQIKGGFMDFDKLIATSDMM 242

Query: 246 PKVASLGKLLGPRGLMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGKADFS 305
            KVASLG++LGPRGLMP PKAGTV  N+ QA+ EFK+GKVE+R DKTGIVH+PFGK +F 
Sbjct: 243 AKVASLGRILGPRGLMPTPKAGTVTPNVAQAVEEFKKGKVEFRVDKTGIVHIPFGKLNFE 302

Query: 306 EEDLLINLLAAIKSVETNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDFKLPSSA 358
           EEDLLINL A IKSVETNKPTGAKGVYWKSAHI SSMGPSIRLNIREMLD+K PS+A
Sbjct: 303 EEDLLINLFATIKSVETNKPTGAKGVYWKSAHISSSMGPSIRLNIREMLDYKPPSNA 352

[Close]
BLAST of Lcy02g003990 vs. ExPASy Swiss-Prot
Match: B0JNQ5 (50S ribosomal protein L1 OS=Microcystis aeruginosa (strain NIES-843) OX=449447 GN=rplA PE=3 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 9.4e-78
Identity = 146/233 (62.66%), Postives = 186/233 (79.83%), Query Frame = 0 

Query: 121 RRRSKRFLEIQKLRENKKEYDIKTAISLLKEMASTKFVETAEAHFRLNIDPKYNDQQLRA 180
           ++ S+R  + Q   EN K Y+   A++LLKE+A+ KF ETAEAH RL IDPKY DQQLR 
Sbjct: 3   KKVSRRLRDAQAKVEN-KAYEPLEALTLLKELATAKFDETAEAHIRLGIDPKYTDQQLRT 62

Query: 181 TVNLPKGTGQTVRVAVLTQGERFDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIASPDMM 240
           TV+LPKGTG+TVRVAV+T+GE+  EA NAGAD+VG E+LIE+I  G MDF+ LIA+PDMM
Sbjct: 63  TVSLPKGTGRTVRVAVITRGEKVQEANNAGADIVGSEELIEEIAKGMMDFEVLIATPDMM 122

Query: 241 PKVASLGKLLGPRGLMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGKADFS 300
           PKVA LG+ LGPRGLMP+PK GTV T+L  AIAEFK GK+E+RAD+TGIVH+ FGKA FS
Sbjct: 123 PKVAKLGRQLGPRGLMPSPKGGTVTTDLTGAIAEFKAGKLEFRADRTGIVHVQFGKASFS 182

Query: 301 EEDLLINLLAAIKSVETNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDFKL 354
            EDLL+NL A  ++V+ N+P+GAKG YW++ ++ SSMGPSI+++I  + D KL
Sbjct: 183 AEDLLVNLKALQETVDRNRPSGAKGRYWRTVYVSSSMGPSIQVDISALRDLKL 234

[Close]
BLAST of Lcy02g003990 vs. ExPASy Swiss-Prot
Match: Q3MA18 (50S ribosomal protein L1 OS=Trichormus variabilis (strain ATCC 29413 / PCC 7937) OX=240292 GN=rplA PE=3 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 8.8e-76
Identity = 141/237 (59.49%), Postives = 186/237 (78.48%), Query Frame = 0 

Query: 121 RRRSKRFLEIQKLRENKKEYDIKTAISLLKEMASTKFVETAEAHFRLNIDPKYNDQQLRA 180
           ++ S+R  E+Q   E+ +EY    A+SLLKE A+ KF E AEAH RL IDPKY DQQLR 
Sbjct: 3   KKVSRRLRELQAKVED-REYGPLDALSLLKETATAKFAEAAEAHIRLGIDPKYTDQQLRT 62

Query: 181 TVNLPKGTGQTVRVAVLTQGERFDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIASPDMM 240
           TV LPKGTGQ VRVAV+ +GE+  EA NAGAD+ G E+LI++I+ G MDFDKLIA+PD+M
Sbjct: 63  TVALPKGTGQIVRVAVIARGEKVTEASNAGADVFGSEELIDEIQKGRMDFDKLIATPDVM 122

Query: 241 PKVASLGKLLGPRGLMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGKADFS 300
           P+VA LGK+LGPRGLMP+PK GTV  ++  AIAEFK GK+E+RAD+TGIVH+ FGKA FS
Sbjct: 123 PQVAKLGKMLGPRGLMPSPKGGTVTFDIASAIAEFKAGKLEFRADRTGIVHVMFGKASFS 182

Query: 301 EEDLLINLLAAIKSVETNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDFKLPSSA 358
            EDLL+NL A  ++++ N+P+GAKG YW++ ++ ++MGPSIR++I  + D+KL  +A
Sbjct: 183 PEDLLVNLKALQETIDRNRPSGAKGRYWRTFYVSATMGPSIRVDINALRDYKLTEAA 238

[Close]
BLAST of Lcy02g003990 vs. ExPASy Swiss-Prot
Match: Q8YLJ7 (50S ribosomal protein L1 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=rplA PE=3 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 2.0e-75
Identity = 141/237 (59.49%), Postives = 186/237 (78.48%), Query Frame = 0 

Query: 121 RRRSKRFLEIQKLRENKKEYDIKTAISLLKEMASTKFVETAEAHFRLNIDPKYNDQQLRA 180
           ++ S+R  E+Q   E+ +EY    A+ LLKE A+ KF E AEAH RL IDPKY DQQLR 
Sbjct: 3   KKVSRRLRELQAKVED-REYGPLDALGLLKETATAKFGEAAEAHIRLGIDPKYTDQQLRT 62

Query: 181 TVNLPKGTGQTVRVAVLTQGERFDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIASPDMM 240
           TV LPKGTGQ VRVAV+ +GE+  EA NAGAD+VG E+LI++I+ G MDFDKLIA+PD+M
Sbjct: 63  TVALPKGTGQIVRVAVIARGEKVTEASNAGADVVGSEELIDEIQKGRMDFDKLIATPDVM 122

Query: 241 PKVASLGKLLGPRGLMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGKADFS 300
           P+VA LGK+LGPRGLMP+PK GTV  ++  AIAEFK GK+E+RAD+TGIVH+ FGKA FS
Sbjct: 123 PQVAKLGKMLGPRGLMPSPKGGTVTFDVASAIAEFKAGKLEFRADRTGIVHVMFGKASFS 182

Query: 301 EEDLLINLLAAIKSVETNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDFKLPSSA 358
            EDLL+NL A  ++++ N+P+GAKG YW++ ++ ++MGPSIR++I  + D+KL  +A
Sbjct: 183 PEDLLVNLKALQETIDRNRPSGAKGRYWRTFYVSATMGPSIRVDINALRDYKLTEAA 238

[Close]
BLAST of Lcy02g003990 vs. ExPASy TrEMBL
Match: A0A6J1G9U2 (Ribosomal protein OS=Cucurbita moschata OX=3662 GN=LOC111452270 PE=3 SV=1)

HSP 1 Score: 642.1 bits (1655), Expect = 1.4e-180
Identity = 335/357 (93.84%), Postives = 344/357 (96.36%), Query Frame = 0 

Query: 1   MAACTSTSPSSLMLTSASSSVHPQDLASSIVSFKGKPQFSTIKSFSSCHFLCKPSRSVDW 60
           MAACTSTSPSSLMLT ASSSV+PQDL SSIVSF GK +FSTIKSFSSCHFLC+P RS DW
Sbjct: 1   MAACTSTSPSSLMLTYASSSVYPQDLTSSIVSFNGKSRFSTIKSFSSCHFLCRPRRSADW 60

Query: 61  VFLNFQRRARHHVIVAALAAEADVAEAEAEEEEGVGGVATATVAAPKPKKGKAALPLKRD 120
           + LNFQRRARHHVIVAALAAEA+VAEAEAE EEGV    T TVAAPKPKKGKAALPLKRD
Sbjct: 61  ICLNFQRRARHHVIVAALAAEANVAEAEAEAEEGVAVGGTDTVAAPKPKKGKAALPLKRD 120

Query: 121 RRRSKRFLEIQKLRENKKEYDIKTAISLLKEMASTKFVETAEAHFRLNIDPKYNDQQLRA 180
           RRRSKRFLEIQKLRENKKEY+IKTAISLLKEMASTKFVETAEAHFRLNIDPKYNDQQLRA
Sbjct: 121 RRRSKRFLEIQKLRENKKEYEIKTAISLLKEMASTKFVETAEAHFRLNIDPKYNDQQLRA 180

Query: 181 TVNLPKGTGQTVRVAVLTQGERFDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIASPDMM 240
           TVNLPKGTGQTVRVAVLTQGE+FDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIASPDMM
Sbjct: 181 TVNLPKGTGQTVRVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIASPDMM 240

Query: 241 PKVASLGKLLGPRGLMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGKADFS 300
           PKVASLGKLLGPRGLMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGKADFS
Sbjct: 241 PKVASLGKLLGPRGLMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGKADFS 300

Query: 301 EEDLLINLLAAIKSVETNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDFKLPSSA 358
           EEDLL+NLLAAIKSVETNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDFKLPS+A
Sbjct: 301 EEDLLVNLLAAIKSVETNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDFKLPSTA 357

[Close]
BLAST of Lcy02g003990 vs. ExPASy TrEMBL
Match: A0A6J1KEE5 (Ribosomal protein OS=Cucurbita maxima OX=3661 GN=LOC111493089 PE=3 SV=1)

HSP 1 Score: 640.6 bits (1651), Expect = 4.0e-180
Identity = 335/357 (93.84%), Postives = 344/357 (96.36%), Query Frame = 0 

Query: 1   MAACTSTSPSSLMLTSASSSVHPQDLASSIVSFKGKPQFSTIKSFSSCHFLCKPSRSVDW 60
           MAACTSTSPSSLMLT ASSSV+PQDLASSIVSF GK +FSTIKSFSSCHFLC+P RS DW
Sbjct: 1   MAACTSTSPSSLMLTYASSSVYPQDLASSIVSFNGKSRFSTIKSFSSCHFLCRPRRSADW 60

Query: 61  VFLNFQRRARHHVIVAALAAEADVAEAEAEEEEGVGGVATATVAAPKPKKGKAALPLKRD 120
           + LNFQRRARHHVIVAALAAEA+VAEAEAE EEGV    T TVAAPKPKKGKAALPLKRD
Sbjct: 61  ICLNFQRRARHHVIVAALAAEANVAEAEAEAEEGVAVGGTDTVAAPKPKKGKAALPLKRD 120

Query: 121 RRRSKRFLEIQKLRENKKEYDIKTAISLLKEMASTKFVETAEAHFRLNIDPKYNDQQLRA 180
           RRRSKRFLEIQKLRENKKEY+IKTAISLLKEMASTKFVETAEAHFRLNIDPKYNDQQLRA
Sbjct: 121 RRRSKRFLEIQKLRENKKEYEIKTAISLLKEMASTKFVETAEAHFRLNIDPKYNDQQLRA 180

Query: 181 TVNLPKGTGQTVRVAVLTQGERFDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIASPDMM 240
           TVNLPKGTGQTVRVAVLTQGE+FDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIASPDMM
Sbjct: 181 TVNLPKGTGQTVRVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIASPDMM 240

Query: 241 PKVASLGKLLGPRGLMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGKADFS 300
           PKVASLGKLLGPRGLMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGKADFS
Sbjct: 241 PKVASLGKLLGPRGLMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGKADFS 300

Query: 301 EEDLLINLLAAIKSVETNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDFKLPSSA 358
           EEDLL+NLLAAIKSVETNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDFKL S+A
Sbjct: 301 EEDLLVNLLAAIKSVETNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDFKLSSTA 357

[Close]
BLAST of Lcy02g003990 vs. ExPASy TrEMBL
Match: A0A6J1DFM3 (Ribosomal protein OS=Momordica charantia OX=3673 GN=LOC111020374 PE=3 SV=1)

HSP 1 Score: 637.9 bits (1644), Expect = 2.6e-179
Identity = 336/361 (93.07%), Postives = 345/361 (95.57%), Query Frame = 0 

Query: 1   MAACTSTSPSSLMLTSASSSVHPQDLASSIVSFKGKPQFSTIKSFSSCHFLCKPSRSVDW 60
           MA CTSTSPSSLMLTSASSSVHPQDLASSIVSFKGKPQFSTIK+FSS HFLC+P RS DW
Sbjct: 1   MATCTSTSPSSLMLTSASSSVHPQDLASSIVSFKGKPQFSTIKAFSSAHFLCRPRRSTDW 60

Query: 61  VFLNFQRRARHHVIVAALAAE----ADVAEAEAEEEEGVGGVATATVAAPKPKKGKAALP 120
           +FL+FQRRARHHVIVAALAAE        EAEA+EEEG+ G A ATVAAPKPKKGKAALP
Sbjct: 61  IFLHFQRRARHHVIVAALAAEXXXXXXXXEAEAKEEEGLDG-AAATVAAPKPKKGKAALP 120

Query: 121 LKRDRRRSKRFLEIQKLRENKKEYDIKTAISLLKEMASTKFVETAEAHFRLNIDPKYNDQ 180
           LKRDRRRSKRFLEIQKLRENKKEYD+KTAISLLKEMASTKFVETAEAHFRLNIDPKYNDQ
Sbjct: 121 LKRDRRRSKRFLEIQKLRENKKEYDLKTAISLLKEMASTKFVETAEAHFRLNIDPKYNDQ 180

Query: 181 QLRATVNLPKGTGQTVRVAVLTQGERFDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIAS 240
           QLRATVNLPKGTGQTVRVAVLTQGE+FDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIAS
Sbjct: 181 QLRATVNLPKGTGQTVRVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIAS 240

Query: 241 PDMMPKVASLGKLLGPRGLMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGK 300
           PDMMPKVASLGKLLGPRGLMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGK
Sbjct: 241 PDMMPKVASLGKLLGPRGLMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGK 300

Query: 301 ADFSEEDLLINLLAAIKSVETNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDFKLPSS 358
           ADFSEEDLLINLLAAIKSVETNKP+GAKGVYWKS HICSSMGPSIRLNIREMLDFKLPSS
Sbjct: 301 ADFSEEDLLINLLAAIKSVETNKPSGAKGVYWKSTHICSSMGPSIRLNIREMLDFKLPSS 360

[Close]
BLAST of Lcy02g003990 vs. ExPASy TrEMBL
Match: A0A5D3BLK6 (Ribosomal protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold474G00110 PE=3 SV=1)

HSP 1 Score: 619.8 bits (1597), Expect = 7.2e-174
Identity = 329/358 (91.90%), Postives = 340/358 (94.97%), Query Frame = 0 

Query: 1   MAACTSTSPSSLMLTSASSSV-HPQDLASSIVSFKGKPQFSTIKSFSSCHFLCKPSRSVD 60
           MAACTST PSSLMLTSASSSV  PQDLASSIVSFKGKPQ  TIKSFSS +FLC+  RS D
Sbjct: 1   MAACTSTPPSSLMLTSASSSVPPPQDLASSIVSFKGKPQIPTIKSFSSSNFLCRSRRSAD 60

Query: 61  WVFLNFQRRARHHVIVAALAAEADVAEAEAEEEEGVGGVATATVAAPKPKKGKAALPLKR 120
           WVFLNFQRRAR HVIVAALAAEA+VAE EAEEEE V   ATAT  APKPKKGKAALPLKR
Sbjct: 61  WVFLNFQRRARQHVIVAALAAEANVAEVEAEEEEAVAAAATAT--APKPKKGKAALPLKR 120

Query: 121 DRRRSKRFLEIQKLRENKKEYDIKTAISLLKEMASTKFVETAEAHFRLNIDPKYNDQQLR 180
           DRRRSKRFLEIQKLRENKKEYD+ TAISLLKEM+STKFVE+AEAHFRLNIDPKYNDQQLR
Sbjct: 121 DRRRSKRFLEIQKLRENKKEYDLTTAISLLKEMSSTKFVESAEAHFRLNIDPKYNDQQLR 180

Query: 181 ATVNLPKGTGQTVRVAVLTQGERFDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIASPDM 240
           ATVNLPKGTGQTV+VAVLTQGERFDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIASPDM
Sbjct: 181 ATVNLPKGTGQTVKVAVLTQGERFDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIASPDM 240

Query: 241 MPKVASLGKLLGPRGLMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGKADF 300
           MPKVASLGKLLGPRGLMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGKA+F
Sbjct: 241 MPKVASLGKLLGPRGLMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGKANF 300

Query: 301 SEEDLLINLLAAIKSVETNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDFKLPSSA 358
           SEEDLLINLLAAIKS+ETNKP+GAKGVYWKSAHICSSMGPSIRLNIR+MLDFKLPSSA
Sbjct: 301 SEEDLLINLLAAIKSIETNKPSGAKGVYWKSAHICSSMGPSIRLNIRDMLDFKLPSSA 356

[Close]
BLAST of Lcy02g003990 vs. ExPASy TrEMBL
Match: A0A1S3CFH3 (Ribosomal protein OS=Cucumis melo OX=3656 GN=LOC103500332 PE=3 SV=1)

HSP 1 Score: 619.8 bits (1597), Expect = 7.2e-174
Identity = 329/358 (91.90%), Postives = 340/358 (94.97%), Query Frame = 0 

Query: 1   MAACTSTSPSSLMLTSASSSV-HPQDLASSIVSFKGKPQFSTIKSFSSCHFLCKPSRSVD 60
           MAACTST PSSLMLTSASSSV  PQDLASSIVSFKGKPQ  TIKSFSS +FLC+  RS D
Sbjct: 1   MAACTSTPPSSLMLTSASSSVPPPQDLASSIVSFKGKPQIPTIKSFSSSNFLCRSRRSAD 60

Query: 61  WVFLNFQRRARHHVIVAALAAEADVAEAEAEEEEGVGGVATATVAAPKPKKGKAALPLKR 120
           WVFLNFQRRAR HVIVAALAAEA+VAE EAEEEE V   ATAT  APKPKKGKAALPLKR
Sbjct: 61  WVFLNFQRRARQHVIVAALAAEANVAEVEAEEEEAVAAAATAT--APKPKKGKAALPLKR 120

Query: 121 DRRRSKRFLEIQKLRENKKEYDIKTAISLLKEMASTKFVETAEAHFRLNIDPKYNDQQLR 180
           DRRRSKRFLEIQKLRENKKEYD+ TAISLLKEM+STKFVE+AEAHFRLNIDPKYNDQQLR
Sbjct: 121 DRRRSKRFLEIQKLRENKKEYDLTTAISLLKEMSSTKFVESAEAHFRLNIDPKYNDQQLR 180

Query: 181 ATVNLPKGTGQTVRVAVLTQGERFDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIASPDM 240
           ATVNLPKGTGQTV+VAVLTQGERFDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIASPDM
Sbjct: 181 ATVNLPKGTGQTVKVAVLTQGERFDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIASPDM 240

Query: 241 MPKVASLGKLLGPRGLMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGKADF 300
           MPKVASLGKLLGPRGLMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGKA+F
Sbjct: 241 MPKVASLGKLLGPRGLMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGKANF 300

Query: 301 SEEDLLINLLAAIKSVETNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDFKLPSSA 358
           SEEDLLINLLAAIKS+ETNKP+GAKGVYWKSAHICSSMGPSIRLNIR+MLDFKLPSSA
Sbjct: 301 SEEDLLINLLAAIKSIETNKPSGAKGVYWKSAHICSSMGPSIRLNIRDMLDFKLPSSA 356

[Close]
BLAST of Lcy02g003990 vs. NCBI nr
Match: XP_022948661.1 (50S ribosomal protein L1, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 642.1 bits (1655), Expect = 2.8e-180
Identity = 335/357 (93.84%), Postives = 344/357 (96.36%), Query Frame = 0 

Query: 1   MAACTSTSPSSLMLTSASSSVHPQDLASSIVSFKGKPQFSTIKSFSSCHFLCKPSRSVDW 60
           MAACTSTSPSSLMLT ASSSV+PQDL SSIVSF GK +FSTIKSFSSCHFLC+P RS DW
Sbjct: 1   MAACTSTSPSSLMLTYASSSVYPQDLTSSIVSFNGKSRFSTIKSFSSCHFLCRPRRSADW 60

Query: 61  VFLNFQRRARHHVIVAALAAEADVAEAEAEEEEGVGGVATATVAAPKPKKGKAALPLKRD 120
           + LNFQRRARHHVIVAALAAEA+VAEAEAE EEGV    T TVAAPKPKKGKAALPLKRD
Sbjct: 61  ICLNFQRRARHHVIVAALAAEANVAEAEAEAEEGVAVGGTDTVAAPKPKKGKAALPLKRD 120

Query: 121 RRRSKRFLEIQKLRENKKEYDIKTAISLLKEMASTKFVETAEAHFRLNIDPKYNDQQLRA 180
           RRRSKRFLEIQKLRENKKEY+IKTAISLLKEMASTKFVETAEAHFRLNIDPKYNDQQLRA
Sbjct: 121 RRRSKRFLEIQKLRENKKEYEIKTAISLLKEMASTKFVETAEAHFRLNIDPKYNDQQLRA 180

Query: 181 TVNLPKGTGQTVRVAVLTQGERFDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIASPDMM 240
           TVNLPKGTGQTVRVAVLTQGE+FDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIASPDMM
Sbjct: 181 TVNLPKGTGQTVRVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIASPDMM 240

Query: 241 PKVASLGKLLGPRGLMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGKADFS 300
           PKVASLGKLLGPRGLMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGKADFS
Sbjct: 241 PKVASLGKLLGPRGLMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGKADFS 300

Query: 301 EEDLLINLLAAIKSVETNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDFKLPSSA 358
           EEDLL+NLLAAIKSVETNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDFKLPS+A
Sbjct: 301 EEDLLVNLLAAIKSVETNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDFKLPSTA 357

[Close]
BLAST of Lcy02g003990 vs. NCBI nr
Match: XP_022998464.1 (50S ribosomal protein L1, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 640.6 bits (1651), Expect = 8.2e-180
Identity = 335/357 (93.84%), Postives = 344/357 (96.36%), Query Frame = 0 

Query: 1   MAACTSTSPSSLMLTSASSSVHPQDLASSIVSFKGKPQFSTIKSFSSCHFLCKPSRSVDW 60
           MAACTSTSPSSLMLT ASSSV+PQDLASSIVSF GK +FSTIKSFSSCHFLC+P RS DW
Sbjct: 1   MAACTSTSPSSLMLTYASSSVYPQDLASSIVSFNGKSRFSTIKSFSSCHFLCRPRRSADW 60

Query: 61  VFLNFQRRARHHVIVAALAAEADVAEAEAEEEEGVGGVATATVAAPKPKKGKAALPLKRD 120
           + LNFQRRARHHVIVAALAAEA+VAEAEAE EEGV    T TVAAPKPKKGKAALPLKRD
Sbjct: 61  ICLNFQRRARHHVIVAALAAEANVAEAEAEAEEGVAVGGTDTVAAPKPKKGKAALPLKRD 120

Query: 121 RRRSKRFLEIQKLRENKKEYDIKTAISLLKEMASTKFVETAEAHFRLNIDPKYNDQQLRA 180
           RRRSKRFLEIQKLRENKKEY+IKTAISLLKEMASTKFVETAEAHFRLNIDPKYNDQQLRA
Sbjct: 121 RRRSKRFLEIQKLRENKKEYEIKTAISLLKEMASTKFVETAEAHFRLNIDPKYNDQQLRA 180

Query: 181 TVNLPKGTGQTVRVAVLTQGERFDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIASPDMM 240
           TVNLPKGTGQTVRVAVLTQGE+FDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIASPDMM
Sbjct: 181 TVNLPKGTGQTVRVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIASPDMM 240

Query: 241 PKVASLGKLLGPRGLMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGKADFS 300
           PKVASLGKLLGPRGLMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGKADFS
Sbjct: 241 PKVASLGKLLGPRGLMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGKADFS 300

Query: 301 EEDLLINLLAAIKSVETNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDFKLPSSA 358
           EEDLL+NLLAAIKSVETNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDFKL S+A
Sbjct: 301 EEDLLVNLLAAIKSVETNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDFKLSSTA 357

[Close]
BLAST of Lcy02g003990 vs. NCBI nr
Match: KAG7036595.1 (50S ribosomal protein L1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 639.8 bits (1649), Expect = 1.4e-179
Identity = 334/357 (93.56%), Postives = 344/357 (96.36%), Query Frame = 0 

Query: 1   MAACTSTSPSSLMLTSASSSVHPQDLASSIVSFKGKPQFSTIKSFSSCHFLCKPSRSVDW 60
           MAACTSTSPSSLMLT ASSSV+PQDLASSIVSF GK +FSTIKSFSSCH LC+P RS DW
Sbjct: 1   MAACTSTSPSSLMLTYASSSVYPQDLASSIVSFNGKSRFSTIKSFSSCHLLCRPRRSADW 60

Query: 61  VFLNFQRRARHHVIVAALAAEADVAEAEAEEEEGVGGVATATVAAPKPKKGKAALPLKRD 120
           + LNFQRRARHHVIVAALAAEA+VAEAEAE EEGV    T TVAAPKPKKGKAALPLKRD
Sbjct: 61  ICLNFQRRARHHVIVAALAAEANVAEAEAEAEEGVAVGGTDTVAAPKPKKGKAALPLKRD 120

Query: 121 RRRSKRFLEIQKLRENKKEYDIKTAISLLKEMASTKFVETAEAHFRLNIDPKYNDQQLRA 180
           RRRSKRFLEIQKLRENKKEY+IKTAISLLKEMASTKFVETAEAHFRLNIDPKYNDQQLRA
Sbjct: 121 RRRSKRFLEIQKLRENKKEYEIKTAISLLKEMASTKFVETAEAHFRLNIDPKYNDQQLRA 180

Query: 181 TVNLPKGTGQTVRVAVLTQGERFDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIASPDMM 240
           TVNLPKGTGQTVRVAVLTQGE+FDEAKNAGADLVGGEDLIEQIKGGFM+FDKLIASPDMM
Sbjct: 181 TVNLPKGTGQTVRVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMM 240

Query: 241 PKVASLGKLLGPRGLMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGKADFS 300
           PKVASLGKLLGPRGLMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGKADFS
Sbjct: 241 PKVASLGKLLGPRGLMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGKADFS 300

Query: 301 EEDLLINLLAAIKSVETNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDFKLPSSA 358
           EEDLL+NLLAAIKSVETNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDFKLPS+A
Sbjct: 301 EEDLLVNLLAAIKSVETNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDFKLPSTA 357

[Close]
BLAST of Lcy02g003990 vs. NCBI nr
Match: XP_022152718.1 (LOW QUALITY PROTEIN: 50S ribosomal protein L1, chloroplastic-like [Momordica charantia])

HSP 1 Score: 637.9 bits (1644), Expect = 5.3e-179
Identity = 336/361 (93.07%), Postives = 345/361 (95.57%), Query Frame = 0 

Query: 1   MAACTSTSPSSLMLTSASSSVHPQDLASSIVSFKGKPQFSTIKSFSSCHFLCKPSRSVDW 60
           MA CTSTSPSSLMLTSASSSVHPQDLASSIVSFKGKPQFSTIK+FSS HFLC+P RS DW
Sbjct: 1   MATCTSTSPSSLMLTSASSSVHPQDLASSIVSFKGKPQFSTIKAFSSAHFLCRPRRSTDW 60

Query: 61  VFLNFQRRARHHVIVAALAAE----ADVAEAEAEEEEGVGGVATATVAAPKPKKGKAALP 120
           +FL+FQRRARHHVIVAALAAE        EAEA+EEEG+ G A ATVAAPKPKKGKAALP
Sbjct: 61  IFLHFQRRARHHVIVAALAAEXXXXXXXXEAEAKEEEGLDG-AAATVAAPKPKKGKAALP 120

Query: 121 LKRDRRRSKRFLEIQKLRENKKEYDIKTAISLLKEMASTKFVETAEAHFRLNIDPKYNDQ 180
           LKRDRRRSKRFLEIQKLRENKKEYD+KTAISLLKEMASTKFVETAEAHFRLNIDPKYNDQ
Sbjct: 121 LKRDRRRSKRFLEIQKLRENKKEYDLKTAISLLKEMASTKFVETAEAHFRLNIDPKYNDQ 180

Query: 181 QLRATVNLPKGTGQTVRVAVLTQGERFDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIAS 240
           QLRATVNLPKGTGQTVRVAVLTQGE+FDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIAS
Sbjct: 181 QLRATVNLPKGTGQTVRVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIAS 240

Query: 241 PDMMPKVASLGKLLGPRGLMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGK 300
           PDMMPKVASLGKLLGPRGLMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGK
Sbjct: 241 PDMMPKVASLGKLLGPRGLMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGK 300

Query: 301 ADFSEEDLLINLLAAIKSVETNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDFKLPSS 358
           ADFSEEDLLINLLAAIKSVETNKP+GAKGVYWKS HICSSMGPSIRLNIREMLDFKLPSS
Sbjct: 301 ADFSEEDLLINLLAAIKSVETNKPSGAKGVYWKSTHICSSMGPSIRLNIREMLDFKLPSS 360

[Close]
BLAST of Lcy02g003990 vs. NCBI nr
Match: XP_023525415.1 (50S ribosomal protein L1, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 637.5 bits (1643), Expect = 6.9e-179
Identity = 332/357 (93.00%), Postives = 343/357 (96.08%), Query Frame = 0 

Query: 1   MAACTSTSPSSLMLTSASSSVHPQDLASSIVSFKGKPQFSTIKSFSSCHFLCKPSRSVDW 60
           MAACTSTSPSSLMLT ASSSV+PQDLASSIVSF GK +FSTIKSFSSCHFLC+P RS DW
Sbjct: 1   MAACTSTSPSSLMLTYASSSVYPQDLASSIVSFNGKSRFSTIKSFSSCHFLCRPRRSADW 60

Query: 61  VFLNFQRRARHHVIVAALAAEADVAEAEAEEEEGVGGVATATVAAPKPKKGKAALPLKRD 120
           + LNFQRRARHHVIVAALAAEA+VAEA+ E EEGV    T  VAAPKPKKGKAALPLKRD
Sbjct: 61  ICLNFQRRARHHVIVAALAAEANVAEADTEAEEGVAVGGTDAVAAPKPKKGKAALPLKRD 120

Query: 121 RRRSKRFLEIQKLRENKKEYDIKTAISLLKEMASTKFVETAEAHFRLNIDPKYNDQQLRA 180
           RRRSKRFLEIQKLRENKKEY+IKTAISLLKEMASTKFVETAEAHFRLNIDPKYNDQQLRA
Sbjct: 121 RRRSKRFLEIQKLRENKKEYEIKTAISLLKEMASTKFVETAEAHFRLNIDPKYNDQQLRA 180

Query: 181 TVNLPKGTGQTVRVAVLTQGERFDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIASPDMM 240
           TVNLPKGTGQTVRVAVLTQGE+FDEAKNAGADLVGGEDLIEQIKGGFM+FDKLIASPDMM
Sbjct: 181 TVNLPKGTGQTVRVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMM 240

Query: 241 PKVASLGKLLGPRGLMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGKADFS 300
           PKVASLGKLLGPRGLMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGKADFS
Sbjct: 241 PKVASLGKLLGPRGLMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGKADFS 300

Query: 301 EEDLLINLLAAIKSVETNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDFKLPSSA 358
           EEDLL+NLLAAIKSVETNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDFKLPS+A
Sbjct: 301 EEDLLVNLLAAIKSVETNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDFKLPSTA 357

[Close]
BLAST of Lcy02g003990 vs. TAIR 10
Match: AT3G63490.1 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 441.4 bits (1134), Expect = 6.8e-124
Identity = 243/356 (68.26%), Postives = 280/356 (78.65%), Query Frame = 0 

Query: 1   MAACTSTSPSSLMLTSASSSVHPQDLASSIVSFKGKPQFSTIKSFSSCHFLCKPSRSVDW 60
           MAAC   + SSLML  A++S   QDL  +   F     F++ +       L     S D 
Sbjct: 1   MAAC--ATHSSLMLAYAAASTRSQDLTPTPSLF----SFASSRPNHLSFPLLLLGGSRDR 60

Query: 61  VFLNFQRRARHHVIVAALAAEADVAEAEAEEEEGVGGVATATVAAPKPKKGKAALPLKRD 120
                 R + H  IV+A+AAEAD+     + EE +   ATA +  PKPKKGKAAL LKRD
Sbjct: 61  RCAAIDRASNHKFIVSAVAAEADL-----DTEEDLEQTATAVLDPPKPKKGKAALVLKRD 120

Query: 121 RRRSKRFLEIQKLRENKKEYDIKTAISLLKEMASTKFVETAEAHFRLNIDPKYNDQQLRA 180
           R RSKRFLEIQKLRE KKEYD+ TAISLLK+ A+T+FVE+ EAHFRLNIDPKYNDQQLRA
Sbjct: 121 RTRSKRFLEIQKLRETKKEYDVNTAISLLKQTANTRFVESVEAHFRLNIDPKYNDQQLRA 180

Query: 181 TVNLPKGTGQTVRVAVLTQGERFDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIASPDMM 240
           TV+LPKGTGQTV VAVL QGE+ DEAK+AGAD+VG +DLIEQIKGGFM+FDKLIASPDMM
Sbjct: 181 TVSLPKGTGQTVIVAVLAQGEKVDEAKSAGADIVGSDDLIEQIKGGFMEFDKLIASPDMM 240

Query: 241 PKVASLGKLLGPRGLMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGKADFS 300
            KVA LGK+LGPRGLMPNPKAGTV  N+PQAI EFK+GKVE+RADKTGIVH+PFGK +F+
Sbjct: 241 VKVAGLGKILGPRGLMPNPKAGTVTANIPQAIEEFKKGKVEFRADKTGIVHIPFGKVNFT 300

Query: 301 EEDLLINLLAAIKSVETNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDFKLPSS 357
           EEDLLIN LAA+KSVETNKP GAKGVYWKSAHICSSMGPSI+LNIREM+DFK P++
Sbjct: 301 EEDLLINFLAAVKSVETNKPKGAKGVYWKSAHICSSMGPSIKLNIREMIDFKPPTA 345

[Close]
BLAST of Lcy02g003990 vs. TAIR 10
Match: AT3G63490.2 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 297.0 bits (759), Expect = 2.1e-80
Identity = 178/296 (60.14%), Postives = 210/296 (70.95%), Query Frame = 0 

Query: 1   MAACTSTSPSSLMLTSASSSVHPQDLASSIVSFKGKPQFSTIKSFSSCHFLCKPSRSVDW 60
           MAAC   + SSLML  A++S   QDL  +   F     F++ +       L     S D 
Sbjct: 1   MAAC--ATHSSLMLAYAAASTRSQDLTPTPSLF----SFASSRPNHLSFPLLLLGGSRDR 60

Query: 61  VFLNFQRRARHHVIVAALAAEADVAEAEAEEEEGVGGVATATVAAPKPKKGKAALPLKRD 120
                 R + H  IV+A+AAEAD+     + EE +   ATA +  PKPKKGKAAL LKRD
Sbjct: 61  RCAAIDRASNHKFIVSAVAAEADL-----DTEEDLEQTATAVLDPPKPKKGKAALVLKRD 120

Query: 121 RRRSKRFLEIQKLRENKKEYDIKTAISLLKEMASTKFVETAEAHFRLNIDPKYNDQQLRA 180
           R RSKRFLEIQKLRE KKEYD+ TAISLLK+ A+T+FVE+ EAHFRLNIDPKYNDQQLRA
Sbjct: 121 RTRSKRFLEIQKLRETKKEYDVNTAISLLKQTANTRFVESVEAHFRLNIDPKYNDQQLRA 180

Query: 181 TVNLPKGTGQTVRVAVLTQGERFDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIASPDMM 240
           TV+LPKGTGQTV VAVL QGE+ DEAK+AGAD+VG +DLIEQIKGGFM+FDKLIASPDMM
Sbjct: 181 TVSLPKGTGQTVIVAVLAQGEKVDEAKSAGADIVGSDDLIEQIKGGFMEFDKLIASPDMM 240

Query: 241 PKVASLGKLLGPRGLMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGK 297
            KVA LGK+LGPRGLMPNPKAGTV  N+PQ+    ++GK+     K G+     GK
Sbjct: 241 VKVAGLGKILGPRGLMPNPKAGTVTANIPQS---SRRGKLNSEQTKLGLFTFHLGK 282

[Close]
BLAST of Lcy02g003990 vs. TAIR 10
Match: AT2G42710.1 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 162.5 bits (410), Expect = 6.1e-40
Identity = 90/224 (40.18%), Postives = 137/224 (61.16%), Query Frame = 0 

Query: 132 KLRENKKE-YDIKTAISLLKEMASTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQ 191
           +L+  KK  +D+  AI  +K  A  KF ET EAH RL I+   ++  +R T+ LP    +
Sbjct: 179 ELKHGKKPIFDLMEAIREIKGNAKAKFDETLEAHVRLGIEKGRSELIVRGTLALPHSVKK 238

Query: 192 TVRVAVLTQGERFDEAKNAGADLVGGEDLIEQI-KGGFMDFDKLIASPDMMPKVASLGKL 251
            V+VA   +G   ++AK AGAD+VGG +LIE+I K G +DFD+ +A+P MMP+V  + ++
Sbjct: 239 DVKVAFFAEGADAEDAKAAGADVVGGLELIEEILKSGKIDFDRCLATPKMMPRVYKISRI 298

Query: 252 LGPRGLMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGKADFSEEDLLINLL 311
           L   GLMPNPK G+V  ++ +A+ + K G  ++R DKT I+H+P GK  FSEE L  N+ 
Sbjct: 299 LNNHGLMPNPKQGSVTKDVTKAVKDAKAGHTKFRMDKTSILHVPLGKMSFSEEALRENVG 358

Query: 312 AAIKSVETNKPTGAKGV-----YWKSAHICSSMGPSIRLNIREM 349
           A + ++   KP G K       Y  + H+CS+MG    ++I+ +
Sbjct: 359 AFMNALLLAKPAGLKKTSKYAGYVNAFHLCSTMGKGYPVSIQSL 402

The following BLAST results are available for this feature:
BLAST of Lcy02g003990 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9LY669.5e-12368.2650S ribosomal protein L1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL1 ... [more]
Q9LE952.6e-12068.3550S ribosomal protein L1, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL1 PE=... [more]
B0JNQ59.4e-7862.6650S ribosomal protein L1 OS=Microcystis aeruginosa (strain NIES-843) OX=449447 G... [more]
Q3MA188.8e-7659.4950S ribosomal protein L1 OS=Trichormus variabilis (strain ATCC 29413 / PCC 7937)... [more]
Q8YLJ72.0e-7559.4950S ribosomal protein L1 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)... [more]
BLAST of Lcy02g003990 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1G9U21.4e-18093.84Ribosomal protein OS=Cucurbita moschata OX=3662 GN=LOC111452270 PE=3 SV=1[more]
A0A6J1KEE54.0e-18093.84Ribosomal protein OS=Cucurbita maxima OX=3661 GN=LOC111493089 PE=3 SV=1[more]
A0A6J1DFM32.6e-17993.07Ribosomal protein OS=Momordica charantia OX=3673 GN=LOC111020374 PE=3 SV=1[more]
A0A5D3BLK67.2e-17491.90Ribosomal protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold474G00... [more]
A0A1S3CFH37.2e-17491.90Ribosomal protein OS=Cucumis melo OX=3656 GN=LOC103500332 PE=3 SV=1[more]
BLAST of Lcy02g003990 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022948661.12.8e-18093.8450S ribosomal protein L1, chloroplastic-like [Cucurbita moschata][more]
XP_022998464.18.2e-18093.8450S ribosomal protein L1, chloroplastic-like [Cucurbita maxima][more]
KAG7036595.11.4e-17993.5650S ribosomal protein L1, chloroplastic [Cucurbita argyrosperma subsp. argyrospe... [more]
XP_022152718.15.3e-17993.07LOW QUALITY PROTEIN: 50S ribosomal protein L1, chloroplastic-like [Momordica cha... [more]
XP_023525415.16.9e-17993.0050S ribosomal protein L1, chloroplastic-like [Cucurbita pepo subsp. pepo][more]
BLAST of Lcy02g003990 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G63490.16.8e-12468.26Ribosomal protein L1p/L10e family [more]
AT3G63490.22.1e-8060.14Ribosomal protein L1p/L10e family [more]
AT2G42710.16.1e-4040.18Ribosomal protein L1p/L10e family [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 75..95
NoneNo IPR availableGENE3D3.30.190.20coord: 140..343
e-value: 6.2E-82
score: 276.1
NoneNo IPR availablePANTHERPTHR23105RIBOSOMAL PROTEIN L7AE FAMILY MEMBERcoord: 137..350
NoneNo IPR availablePANTHERPTHR23105:SF110MITOCHONDRIAL RIBOSOMAL PROTEIN, LARGEcoord: 137..350
IPR028364Ribosomal protein L1/ribosomal biogenesis proteinPFAMPF00687Ribosomal_L1coord: 149..339
e-value: 1.3E-46
score: 158.9
IPR028364Ribosomal protein L1/ribosomal biogenesis proteinCDDcd00403Ribosomal_L1coord: 142..343
e-value: 3.43853E-73
score: 223.985
IPR016095Ribosomal protein L1, 3-layer alpha/beta-sandwichGENE3D3.40.50.790coord: 187..278
e-value: 6.2E-82
score: 276.1
IPR005878Ribosomal protein L1, bacterial-typeTIGRFAMTIGR01169TIGR01169coord: 123..347
e-value: 1.3E-94
score: 313.8
IPR005878Ribosomal protein L1, bacterial-typeHAMAPMF_01318_BRibosomal_L1_Bcoord: 121..348
score: 39.668339
IPR023673Ribosomal protein L1, conserved sitePROSITEPS01199RIBOSOMAL_L1coord: 240..258
IPR023674Ribosomal protein L1-likeSUPERFAMILY56808Ribosomal protein L1coord: 126..345

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy02g003990.1Lcy02g003990.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000470 maturation of LSU-rRNA
biological_process GO:0006412 translation
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0015934 large ribosomal subunit
molecular_function GO:0003729 mRNA binding
molecular_function GO:0019843 rRNA binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003723 RNA binding