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Lcy02g003800 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGGGTTTTTCGGGCAGGCCTCGTCGACGTCCAGCAGTCATGGTACTCTTCTTCCCTTTCATCTCTCGATGCAATTTCATTAGCTGCTCGTCTTATTTGTTGATTCTCTCACGCTGGTTTGTTCTTCTCTGGAAGTTTGATGTATATTTACTTCTACTCTTGATTCCCTCTGTGTGTATCTGAGTTCTGTGATGGAAAGAGTAAACTGTTGACGCGATTGGTTGCGTTTTGAAAGTTTAGCGTTCCGTGGAGTTTAATGCTGAGCATAGATGATATATATTTGTTAATGGTATCACTTGATCTGGGGTTGTGCATAGAAGTCGAGTGGTTTATCTGTTGTAGTTGAGCTTAGGTTGGCTTAGTTAGGGAGGTGAGAGTATAAGTTCTACTTTGCTAGGTAAAGAGTAGACCATCTGAATCAACTGGCAGCCCGTGGCGTGATCACGTGGATTTGGGAGTATTTTGTGGCACGGACTGTGGCAGGACGAACTAAAGGAATATTAATATTTGTAGTTTATGTTATCTGGGTCATTGATTTGCTTAATATATGATTGCTGCAGATGAACTTTGGAAGGCGTTATTATTGAGTGAGGTCTAATTGTTTCATCCTATATTGCTTAAAAGAAGGGATTTTTCACAAGATAAACGTTGCCCATGGAATGGATTAATGGTTCTGGGGCCTTGATTTTAAGTTATAGAATATTCCGTCTAAAGAAGTTTTAGATCAACGAATAGAAATGCAGTAGTTAAGTAACATATTGGGTTTGCGATGTTTGTGTCTTATTGATATTTCTAGGTTGTAGCATCAGAGTTTAGAAATTGATTGTTGATATTGTAATGGGAAACAGGTAAACGTTCCCAAGACAAAGAAAACTTATTGCAAGAGCAAGGAGTGCAGGAAGCACACCTTGCACAAGGTTACACAATATAAGAAGGGAAAGGATAGTCTTGCTGCACAGGGAAAACGTCGGTACGATCGCAAGCAATCAGGATATGGAGGTCAGACCAAGCCCGTGTTTCACAAGAAGGTTAGTTACTTTTAAGTCCAGTCAAATTATTACCTTTTCCTTTCCCGCGAGCCTTTGATCTAAATTGAAATGTCATAAATCTCACAGGCTAAAACTACCAAGAAGATTGTGTTGAGGCTGCAATGCCAAGGTTGCAAACACGTATCCCAGCACCCTATCAAGGTTAGGAAGCAAAGTATTTTATTATTTTCTGTTTATGGCCTCTCTCTATTAGGTATCTGGTTAATTTAATTTTCCAAGGAACTTTTAAAGTGTATAGTGATTCTCAAAATACATATTTAAGGCTGTTGTCATTTGGGTCCAAATAGCACTAATCCATTTACCCCCTTTAAAATAAATACCCATGTGATTATCATGCTTGTGAAGGCAGTGGATTATCTTCAGGGGAGTTTTGTTTTCTCCAATTTTCATGCTCAATATTTGCTTTCAATATCGAACTTGTACTCGGTGCTGCAGTTGAAATAGTTTTGCCTAGCACTTTATTTGTAGTATTTGTTAGCTATTTTTAGTAAACATGCAAGTCCAAATGAGGTAGCCCTAATGTTTAGTTATTATCTGGGTATTGTACCATACCTCCTCATCACATTTCTAAATTGTCAAATGCAGAGATGCAAGCACTTCGAAATTGGTGGAGACAAGAAGGGGAAGGGAACTTCTCTTTTCTAGACGCATCGTCACTTTTTATCTTTTGTCATTTCTTTTTCACAAGATCATTTGTTATCGGAGTTTTGCAGCATTACTCTGTTTTGTTCAGCAATTAGTTCTACATGTCGGAATTATACTATTTAGCTGAAACTTTCTTATCTTAATTATCGAATTTCCTAATTTTTTATGTTCTTCGTTGAATATGTTTTAGTTTCCATGACGAATCGGTCAATACTTGCCGAATTAATTGAGTCACTATTATCAGATTCTTGAAATTTT AGGGTTTTTCGGGCAGGCCTCGTCGACGTCCAGCAGTCATGGTAAACGTTCCCAAGACAAAGAAAACTTATTGCAAGAGCAAGGAGTGCAGGAAGCACACCTTGCACAAGGTTACACAATATAAGAAGGGAAAGGATAGTCTTGCTGCACAGGGAAAACGTCGGTACGATCGCAAGCAATCAGGATATGGAGGTCAGACCAAGCCCGTGTTTCACAAGAAGGCTAAAACTACCAAGAAGATTGTGTTGAGGCTGCAATGCCAAGGTTGCAAACACGTATCCCAGCACCCTATCAAGGTTAGGAAGCAAAGTATTTTATTATTTTCTGTTTATGGCCTCTCTCTATTAGGTATCTGGTTAATTTAATTTTCCAAGGAACTTTTAAAGTGTATAGTGATTCTCAAAATACATATTTAAGGCTGTTGTCATTTGGGTCCAAATAGCACTAATCCATTTACCCCCTTTAAAATAAATACCCATGTGATTATCATGCTTGTGAAGGCAGTGGATTATCTTCAGGGGAGTTTTGTTTTCTCCAATTTTCATGCTCAATATTTGCTTTCAATATCGAACTTGTACTCGGTGCTGCAGTTGAAATAGTTTTGCCTAGCACTTTATTTGTAGTATTTGTTAGCTATTTTTAGTAAACATGCAAGTCCAAATGAGGTAGCCCTAATGTTTAGTTATTATCTGGGTATTGTACCATACCTCCTCATCACATTTCTAAATTGTCAAATGCAGAGATGCAAGCACTTCGAAATTGGTGGAGACAAGAAGGGGAAGGGAACTTCTCTTTTCTAGACGCATCGTCACTTTTTATCTTTTGTCATTTCTTTTTCACAAGATCATTTGTTATCGGAGTTTTGCAGCATTACTCTGTTTTGTTCAGCAATTAGTTCTACATGTCGGAATTATACTATTTAGCTGAAACTTTCTTATCTTAATTATCGAATTTCCTAATTTTTTATGTTCTTCGTTGAATATGTTTTAGTTTCCATGACGAATCGGTCAATACTTGCCGAATTAATTGAGTCACTATTATCAGATTCTTGAAATTTT ATGGTAAACGTTCCCAAGACAAAGAAAACTTATTGCAAGAGCAAGGAGTGCAGGAAGCACACCTTGCACAAGGTTACACAATATAAGAAGGGAAAGGATAGTCTTGCTGCACAGGGAAAACGTCGGTACGATCGCAAGCAATCAGGATATGGAGGTCAGACCAAGCCCGTGTTTCACAAGAAGGCTAAAACTACCAAGAAGATTGTGTTGAGGCTGCAATGCCAAGGTTGCAAACACGTATCCCAGCACCCTATCAAGGTTAGGAAGCAAAGTATTTTATTATTTTCTGTTTATGGCCTCTCTCTATTAGGTATCTGGTTAATTTAA MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKVRKQSILLFSVYGLSLLGIWLI Homology
BLAST of Lcy02g003800 vs. ExPASy Swiss-Prot
Match: Q96499 (60S ribosomal protein L44 OS=Gossypium hirsutum OX=3635 GN=RPL44 PE=3 SV=3) HSP 1 Score: 177.2 bits (448), Expect = 1.0e-43 Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0
BLAST of Lcy02g003800 vs. ExPASy Swiss-Prot
Match: O23290 (60S ribosomal protein L36a OS=Arabidopsis thaliana OX=3702 GN=RPL36AA PE=3 SV=3) HSP 1 Score: 165.2 bits (417), Expect = 4.0e-40 Identity = 79/86 (91.86%), Postives = 82/86 (95.35%), Query Frame = 0
BLAST of Lcy02g003800 vs. ExPASy Swiss-Prot
Match: P0CQ51 (60S ribosomal protein L44 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=RPL44 PE=3 SV=1) HSP 1 Score: 143.3 bits (360), Expect = 1.6e-33 Identity = 69/86 (80.23%), Postives = 76/86 (88.37%), Query Frame = 0
BLAST of Lcy02g003800 vs. ExPASy Swiss-Prot
Match: P0CQ50 (60S ribosomal protein L44 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) OX=214684 GN=RPL44 PE=3 SV=1) HSP 1 Score: 143.3 bits (360), Expect = 1.6e-33 Identity = 69/86 (80.23%), Postives = 76/86 (88.37%), Query Frame = 0
BLAST of Lcy02g003800 vs. ExPASy Swiss-Prot
Match: O59870 (60S ribosomal protein L44 OS=Phaffia rhodozyma OX=264483 GN=RPL44 PE=3 SV=3) HSP 1 Score: 142.9 bits (359), Expect = 2.1e-33 Identity = 68/86 (79.07%), Postives = 76/86 (88.37%), Query Frame = 0
BLAST of Lcy02g003800 vs. ExPASy TrEMBL
Match: A0A0S3S1Y2 (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.05G015400 PE=3 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 1.5e-42 Identity = 93/107 (86.92%), Postives = 98/107 (91.59%), Query Frame = 0
BLAST of Lcy02g003800 vs. ExPASy TrEMBL
Match: A0A0D2RJ15 (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_005G210700 PE=3 SV=1) HSP 1 Score: 179.5 bits (454), Expect = 7.6e-42 Identity = 88/94 (93.62%), Postives = 90/94 (95.74%), Query Frame = 0
BLAST of Lcy02g003800 vs. ExPASy TrEMBL
Match: A0A059BG29 (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_G02575 PE=3 SV=1) HSP 1 Score: 179.1 bits (453), Expect = 9.9e-42 Identity = 87/88 (98.86%), Postives = 88/88 (100.00%), Query Frame = 0
BLAST of Lcy02g003800 vs. ExPASy TrEMBL
Match: A0A0D2S9Q7 (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_013G070100 PE=3 SV=1) HSP 1 Score: 179.1 bits (453), Expect = 9.9e-42 Identity = 87/88 (98.86%), Postives = 88/88 (100.00%), Query Frame = 0
BLAST of Lcy02g003800 vs. ExPASy TrEMBL
Match: A0A0D2TMG0 (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_012G133600 PE=3 SV=1) HSP 1 Score: 179.1 bits (453), Expect = 9.9e-42 Identity = 87/88 (98.86%), Postives = 88/88 (100.00%), Query Frame = 0
BLAST of Lcy02g003800 vs. NCBI nr
Match: BAT86836.1 (hypothetical protein VIGAN_05015400 [Vigna angularis var. angularis]) HSP 1 Score: 181.8 bits (460), Expect = 3.1e-42 Identity = 93/107 (86.92%), Postives = 98/107 (91.59%), Query Frame = 0
BLAST of Lcy02g003800 vs. NCBI nr
Match: KJB31844.1 (hypothetical protein B456_005G210700 [Gossypium raimondii]) HSP 1 Score: 179.5 bits (454), Expect = 1.6e-41 Identity = 88/94 (93.62%), Postives = 90/94 (95.74%), Query Frame = 0
BLAST of Lcy02g003800 vs. NCBI nr
Match: KCW65063.1 (hypothetical protein EUGRSUZ_G02575 [Eucalyptus grandis] >KJB49985.1 hypothetical protein B456_008G148400 [Gossypium raimondii] >CAA2977523.1 60S ribosomal L44 [Olea europaea subsp. europaea]) HSP 1 Score: 179.1 bits (453), Expect = 2.0e-41 Identity = 87/88 (98.86%), Postives = 88/88 (100.00%), Query Frame = 0
BLAST of Lcy02g003800 vs. NCBI nr
Match: KJB76838.1 (hypothetical protein B456_012G133600 [Gossypium raimondii]) HSP 1 Score: 179.1 bits (453), Expect = 2.0e-41 Identity = 87/88 (98.86%), Postives = 88/88 (100.00%), Query Frame = 0
BLAST of Lcy02g003800 vs. NCBI nr
Match: KJB79862.1 (hypothetical protein B456_013G070100 [Gossypium raimondii]) HSP 1 Score: 179.1 bits (453), Expect = 2.0e-41 Identity = 87/88 (98.86%), Postives = 88/88 (100.00%), Query Frame = 0
BLAST of Lcy02g003800 vs. TAIR 10
Match: AT3G23390.1 (Zinc-binding ribosomal protein family protein ) HSP 1 Score: 165.2 bits (417), Expect = 2.8e-41 Identity = 79/86 (91.86%), Postives = 82/86 (95.35%), Query Frame = 0
BLAST of Lcy02g003800 vs. TAIR 10
Match: AT4G14320.1 (Zinc-binding ribosomal protein family protein ) HSP 1 Score: 165.2 bits (417), Expect = 2.8e-41 Identity = 79/86 (91.86%), Postives = 82/86 (95.35%), Query Frame = 0
BLAST of Lcy02g003800 vs. TAIR 10
Match: AT4G14320.2 (Zinc-binding ribosomal protein family protein ) HSP 1 Score: 165.2 bits (417), Expect = 2.8e-41 Identity = 79/86 (91.86%), Postives = 82/86 (95.35%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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