Lcy02g002780 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy02g002780
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Pentatricopeptide repeat-containing protein
Location	Chr02: 3805127 .. 3807924 (+)
RNA-Seq Expression	Lcy02g002780
Synteny	Lcy02g002780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATAAAAGTTCAAAATGTCTTGAAAGAAACCAAGGGTATGTCAATTTTCCTCTTTCTCTTCCATCGTAATGTTTGGGCTACTTACCTAGCCTCCAAAATCCATTCAATCTTCACAAATAAAGCTCATTCCTTTATGAAGAAATCTTGTGATTCTCAAACTTCAGAGCTACAATAGTGATGAATGAATATTTCTCATTTTCTTCACGAACTCCAACTCTGCGCCAGACGCCAATCGGTATCAGCCGCCGGAAAACTCCATTCTCAGATCATCAAAGCCGGTTTCGACAAATCCGGCCCTCTCCCGAACACCCTTTTGGATGTCTATGGCAAATGCGGTCTCATTCCACAGGCCCTCCAACTGTTCGACGAAATGCCCCAAAGAGACCATGTCTCGTGGGCCTCGATTCTCACCGCCCATAACCAAGCCATTCTTCCCCGGCGGACCCTTTCAATGCTTAGCACCATGTTTATGCTTGATGGGTTGCAGCCCGACCACTTTGTCTTCGCCTGCATCGTCAGGGCCTGCGCCAGTTTGGGGTATTTGCGGCTAGGTAGGCAAGTTCATGCTCGGTTTATGCTGTCTTCTTTTTGTGATGATGAGGTTGTTAAGTCATCTTTGATTGATATGTATGCTAAATGTGGCCAACCCGATGATGCTCGGGCTGTTTTTGATTCCATCTTGTTTAAGAATTCAGTTTCTTGGACTGCTATGATTTCTGGGTATGCTAAAAGTGGGAGGAAATCTGATGCTATTGAGCTTTTTCAGCGAGCTCCTATGAAAAACTTGTTCTCTTGGACTGCTTTGATTTCAGGGTTGATTCAAAGTGGGAATGGAGTGTACTCGTTTTCTTTGTTTAATGAGATGAGGAGAGAAGGAATTGATATTGTAGACCCTTTAGTTCTTTCGAGTGTTGTTGGAGCTTGTGCAAATTTGGCTCTTCTGGAGCTGGGAAAGCAAATTCATGGTTTGGTTATAGCTCTTGGCTTTGAGTCTTGTCTGTTTATAAGCAATGCACTTGTGGATATGTATGCTAAATGTAGTGACATATTAGCAGCTAAGGTTATTTTTTTCAGAATGCCACGAAAAGATGTGATTTCTTGGACTTCAATCATAGTTGGGACTGCTCAACATGGGAAAGCAGAGGAGGCATTAACTTTATATGATGATATGGTTTTGACTGGAACAAAGCCAAATGAAGTAACTTTCGTTGGATTACTTTATGCGTGCAGTCATGTAGGGCTAGTTAATAGAGGTCGTGAGTTATTTAGGTCTATGGTAATTGATTATAGGATTAATCCATCTCTACAGCACTATACATGTTTATTAGATCTCCTAAGTCGCTCCGGACACCTTGACGAGGCAGAGAATCTACTTAATGAAATGCCATTTAAACCCGATGAGCCTACTTGGGCATCCCTATTGAGCGCTTGCAAGCGACATAATAATATGAAGATGGGAGTTCGAATTGCTGATCATGTGTTGAATTTAAAACCGGAAGATCCTTCAACATACATACTCTTATCGAATGTTTATGCCGTTGCTGAAATGTGGGAAAGTGTTTCAAAGGTGAGAAAGTTGATGAGTTCTATGGAAGTAAGAAAGGAACCGGGTTATAGTAGCATTGACTTTGGAAAGGAGAGCCAAGTATTTCATGCTGGGGAGACTTGCCATCCTATGAAGGATGAGATTTTCCATCTACTGAAGGATTTAGATGCTGAAATGAGAAGAAGAGGCTATGTTCCTAACACTAGCTTTGTTTTGCATGACATGGAGCAGCAAGAAAAGGAAAAACAACTCTTTTGGCACAGTGAGAGGTTGGCTATGGCTTATGGACTTCTCAAGGCTGTTCCAGGGACGATTATTCGAATCGTGAAAAATCTTCGTATTTGTGGAGATTGTCATAATGTTTTGAAATTCACTAGTGATATAGTGAAAAGAGAAATCGTCGTCCGGGATGCCACGAGATATCATCATTTCAAGGAAGGGAAATGTTCTTGCAATGATTTCTGGTGACTCTATGGGCAATTTTGTGGGATTCTCATCTACTTATCTCCAAAATTCTTTGGCTAAAATAGTATGAAGTGGTGAAGTATCTAAAAGCACTTAGCCAAATCATCCATAGGACAGCTCTTGAGGCCTTCTTCTAAAGGACACTTTCTGTCTTTCCCTTCAGCCACCGACTCGAAATAACGTTCTGAAAGATTTAAACATCCCTATAGAGACACAAGCTCATATTGAACATTCCGCATAAATGAAGCCACCAATCTGCCACAATCATATTAATGAGAAGGCACATAACTTGAAGGATTCCTATGAAGGAGAAGAGGCTATGGTCCTAATACTACCTCTATTTTGCAAGACATGGAGCATCAAGAACAGGGAAAAACAACACTTTTATCACATTTAGAAACTGGCTTTGGTCTATGGAGTTATCCACTAAAATGCTGACAGGAAGATGCCTGTGTGAGGTATAGTATCATTTACATAGAAAGTATTGAGTTTATTGGTCCATTATTAAATAAACATAGTTTCACAAGTCACAAGTAAAGGTTCAAGTCCAAAAGCCTATATATTTTATTTATAAGTTTCAACCATTATGGAAACTTTATTCAGCAGAGTTTAGAACTTTGTTGTGTTGTATCATTTGTCATATTATTTATTGATATTCAAATTTCATTCATGTGGGATAGTTGGAGGAAACCAAGTGCCTATTTGGAATCACTTTCATGTGCTTAAAAGCTTTTTTTTAAGTACTTGAAACGTCATTCCAAACAAACCTAAAGAAATTTAACATGAG

mRNA sequence

AATAAAAGTTCAAAATGTCTTGAAAGAAACCAAGGGTATGTCAATTTTCCTCTTTCTCTTCCATCGTAATGTTTGGGCTACTTACCTAGCCTCCAAAATCCATTCAATCTTCACAAATAAAGCTCATTCCTTTATGAAGAAATCTTGTGATTCTCAAACTTCAGAGCTACAATAGTGATGAATGAATATTTCTCATTTTCTTCACGAACTCCAACTCTGCGCCAGACGCCAATCGGTATCAGCCGCCGGAAAACTCCATTCTCAGATCATCAAAGCCGGTTTCGACAAATCCGGCCCTCTCCCGAACACCCTTTTGGATGTCTATGGCAAATGCGGTCTCATTCCACAGGCCCTCCAACTGTTCGACGAAATGCCCCAAAGAGACCATGTCTCGTGGGCCTCGATTCTCACCGCCCATAACCAAGCCATTCTTCCCCGGCGGACCCTTTCAATGCTTAGCACCATGTTTATGCTTGATGGGTTGCAGCCCGACCACTTTGTCTTCGCCTGCATCGTCAGGGCCTGCGCCAGTTTGGGGTATTTGCGGCTAGGTAGGCAAGTTCATGCTCGGTTTATGCTGTCTTCTTTTTGTGATGATGAGGTTGTTAAGTCATCTTTGATTGATATGTATGCTAAATGTGGCCAACCCGATGATGCTCGGGCTGTTTTTGATTCCATCTTGTTTAAGAATTCAGTTTCTTGGACTGCTATGATTTCTGGGTATGCTAAAAGTGGGAGGAAATCTGATGCTATTGAGCTTTTTCAGCGAGCTCCTATGAAAAACTTGTTCTCTTGGACTGCTTTGATTTCAGGGTTGATTCAAAGTGGGAATGGAGTGTACTCGTTTTCTTTGTTTAATGAGATGAGGAGAGAAGGAATTGATATTGTAGACCCTTTAGTTCTTTCGAGTGTTGTTGGAGCTTGTGCAAATTTGGCTCTTCTGGAGCTGGGAAAGCAAATTCATGGTTTGGTTATAGCTCTTGGCTTTGAGTCTTGTCTGTTTATAAGCAATGCACTTGTGGATATGTATGCTAAATGTAGTGACATATTAGCAGCTAAGGTTATTTTTTTCAGAATGCCACGAAAAGATGTGATTTCTTGGACTTCAATCATAGTTGGGACTGCTCAACATGGGAAAGCAGAGGAGGCATTAACTTTATATGATGATATGGTTTTGACTGGAACAAAGCCAAATGAAGTAACTTTCGTTGGATTACTTTATGCGTGCAGTCATGTAGGGCTAGTTAATAGAGGTCGTGAGTTATTTAGGTCTATGGTAATTGATTATAGGATTAATCCATCTCTACAGCACTATACATGTTTATTAGATCTCCTAAGTCGCTCCGGACACCTTGACGAGGCAGAGAATCTACTTAATGAAATGCCATTTAAACCCGATGAGCCTACTTGGGCATCCCTATTGAGCGCTTGCAAGCGACATAATAATATGAAGATGGGAGTTCGAATTGCTGATCATGTGTTGAATTTAAAACCGGAAGATCCTTCAACATACATACTCTTATCGAATGTTTATGCCGTTGCTGAAATGTGGGAAAGTGTTTCAAAGGTGAGAAAGTTGATGAGTTCTATGGAAGTAAGAAAGGAACCGGGTTATAGTAGCATTGACTTTGGAAAGGAGAGCCAAGTATTTCATGCTGGGGAGACTTGCCATCCTATGAAGGATGAGATTTTCCATCTACTGAAGGATTTAGATGCTGAAATGAGAAGAAGAGGCTATGTTCCTAACACTAGCTTTGTTTTGCATGACATGGAGCAGCAAGAAAAGGAAAAACAACTCTTTTGGCACAGTGAGAGGTTGGCTATGGCTTATGGACTTCTCAAGGCTGTTCCAGGGACGATTATTCGAATCGTGAAAAATCTTCGTATTTGTGGAGATTGTCATAATGTTTTGAAATTCACTAGTGATATAGTGAAAAGAGAAATCGTCGTCCGGGATGCCACGAGATATCATCATTTCAAGGAAGGGAAATGTTCTTGCAATGATTTCTGGTGACTCTATGGGCAATTTTGTGGGATTCTCATCTACTTATCTCCAAAATTCTTTGGCTAAAATAGTATGAAGTGGTGAAGTATCTAAAAGCACTTAGCCAAATCATCCATAGGACAGCTCTTGAGGCCTTCTTCTAAAGGACACTTTCTGTCTTTCCCTTCAGCCACCGACTCGAAATAACGTTCTGAAAGATTTAAACATCCCTATAGAGACACAAGCTCATATTGAACATTCCGCATAAATGAAGCCACCAATCTGCCACAATCATATTAATGAGAAGGCACATAACTTGAAGGATTCCTATGAAGGAGAAGAGGCTATGGTCCTAATACTACCTCTATTTTGCAAGACATGGAGCATCAAGAACAGGGAAAAACAACACTTTTATCACATTTAGAAACTGGCTTTGGTCTATGGAGTTATCCACTAAAATGCTGACAGGAAGATGCCTGTGTGAGGTATAGTATCATTTACATAGAAAGTATTGAGTTTATTGGTCCATTATTAAATAAACATAGTTTCACAAGTCACAAGTAAAGGTTCAAGTCCAAAAGCCTATATATTTTATTTATAAGTTTCAACCATTATGGAAACTTTATTCAGCAGAGTTTAGAACTTTGTTGTGTTGTATCATTTGTCATATTATTTATTGATATTCAAATTTCATTCATGTGGGATAGTTGGAGGAAACCAAGTGCCTATTTGGAATCACTTTCATGTGCTTAAAAGCTTTTTTTTAAGTACTTGAAACGTCATTCCAAACAAACCTAAAGAAATTTAACATGAG

Coding sequence (CDS)

ATGAATATTTCTCATTTTCTTCACGAACTCCAACTCTGCGCCAGACGCCAATCGGTATCAGCCGCCGGAAAACTCCATTCTCAGATCATCAAAGCCGGTTTCGACAAATCCGGCCCTCTCCCGAACACCCTTTTGGATGTCTATGGCAAATGCGGTCTCATTCCACAGGCCCTCCAACTGTTCGACGAAATGCCCCAAAGAGACCATGTCTCGTGGGCCTCGATTCTCACCGCCCATAACCAAGCCATTCTTCCCCGGCGGACCCTTTCAATGCTTAGCACCATGTTTATGCTTGATGGGTTGCAGCCCGACCACTTTGTCTTCGCCTGCATCGTCAGGGCCTGCGCCAGTTTGGGGTATTTGCGGCTAGGTAGGCAAGTTCATGCTCGGTTTATGCTGTCTTCTTTTTGTGATGATGAGGTTGTTAAGTCATCTTTGATTGATATGTATGCTAAATGTGGCCAACCCGATGATGCTCGGGCTGTTTTTGATTCCATCTTGTTTAAGAATTCAGTTTCTTGGACTGCTATGATTTCTGGGTATGCTAAAAGTGGGAGGAAATCTGATGCTATTGAGCTTTTTCAGCGAGCTCCTATGAAAAACTTGTTCTCTTGGACTGCTTTGATTTCAGGGTTGATTCAAAGTGGGAATGGAGTGTACTCGTTTTCTTTGTTTAATGAGATGAGGAGAGAAGGAATTGATATTGTAGACCCTTTAGTTCTTTCGAGTGTTGTTGGAGCTTGTGCAAATTTGGCTCTTCTGGAGCTGGGAAAGCAAATTCATGGTTTGGTTATAGCTCTTGGCTTTGAGTCTTGTCTGTTTATAAGCAATGCACTTGTGGATATGTATGCTAAATGTAGTGACATATTAGCAGCTAAGGTTATTTTTTTCAGAATGCCACGAAAAGATGTGATTTCTTGGACTTCAATCATAGTTGGGACTGCTCAACATGGGAAAGCAGAGGAGGCATTAACTTTATATGATGATATGGTTTTGACTGGAACAAAGCCAAATGAAGTAACTTTCGTTGGATTACTTTATGCGTGCAGTCATGTAGGGCTAGTTAATAGAGGTCGTGAGTTATTTAGGTCTATGGTAATTGATTATAGGATTAATCCATCTCTACAGCACTATACATGTTTATTAGATCTCCTAAGTCGCTCCGGACACCTTGACGAGGCAGAGAATCTACTTAATGAAATGCCATTTAAACCCGATGAGCCTACTTGGGCATCCCTATTGAGCGCTTGCAAGCGACATAATAATATGAAGATGGGAGTTCGAATTGCTGATCATGTGTTGAATTTAAAACCGGAAGATCCTTCAACATACATACTCTTATCGAATGTTTATGCCGTTGCTGAAATGTGGGAAAGTGTTTCAAAGGTGAGAAAGTTGATGAGTTCTATGGAAGTAAGAAAGGAACCGGGTTATAGTAGCATTGACTTTGGAAAGGAGAGCCAAGTATTTCATGCTGGGGAGACTTGCCATCCTATGAAGGATGAGATTTTCCATCTACTGAAGGATTTAGATGCTGAAATGAGAAGAAGAGGCTATGTTCCTAACACTAGCTTTGTTTTGCATGACATGGAGCAGCAAGAAAAGGAAAAACAACTCTTTTGGCACAGTGAGAGGTTGGCTATGGCTTATGGACTTCTCAAGGCTGTTCCAGGGACGATTATTCGAATCGTGAAAAATCTTCGTATTTGTGGAGATTGTCATAATGTTTTGAAATTCACTAGTGATATAGTGAAAAGAGAAATCGTCGTCCGGGATGCCACGAGATATCATCATTTCAAGGAAGGGAAATGTTCTTGCAATGATTTCTGGTGA

Protein sequence

MNISHFLHELQLCARRQSVSAAGKLHSQIIKAGFDKSGPLPNTLLDVYGKCGLIPQALQLFDEMPQRDHVSWASILTAHNQAILPRRTLSMLSTMFMLDGLQPDHFVFACIVRACASLGYLRLGRQVHARFMLSSFCDDEVVKSSLIDMYAKCGQPDDARAVFDSILFKNSVSWTAMISGYAKSGRKSDAIELFQRAPMKNLFSWTALISGLIQSGNGVYSFSLFNEMRREGIDIVDPLVLSSVVGACANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKVIFFRMPRKDVISWTSIIVGTAQHGKAEEALTLYDDMVLTGTKPNEVTFVGLLYACSHVGLVNRGRELFRSMVIDYRINPSLQHYTCLLDLLSRSGHLDEAENLLNEMPFKPDEPTWASLLSACKRHNNMKMGVRIADHVLNLKPEDPSTYILLSNVYAVAEMWESVSKVRKLMSSMEVRKEPGYSSIDFGKESQVFHAGETCHPMKDEIFHLLKDLDAEMRRRGYVPNTSFVLHDMEQQEKEKQLFWHSERLAMAYGLLKAVPGTIIRIVKNLRICGDCHNVLKFTSDIVKREIVVRDATRYHHFKEGKCSCNDFW

Homology

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BLAST of Lcy02g002780 vs. ExPASy Swiss-Prot
Match: O23266 (Pentatricopeptide repeat-containing protein At4g14050, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H13 PE=1 SV=3)

HSP 1 Score: 868.2 bits (2242), Expect = 5.4e-251
Identity = 413/612 (67.48%), Postives = 508/612 (83.01%), Query Frame = 0


Query: 1   MNISHFLHELQLCARRQSVSAAGKLHSQIIKAGFDKSGPLPNTLLDVYGKCGLIPQALQL 60
           M I H+LH+LQLCAR ++++ A  LH+ I+K G  +  PL NTL++VYGKCG    ALQ+
Sbjct: 1   MLIPHYLHQLQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQV 60

Query: 61  FDEMPQRDHVSWASILTAHNQAILPRRTLSMLSTMFMLDGLQPDHFVFACIVRACASLGY 120
           FDEMP RDH++WAS+LTA NQA L  +TLS+ S++    GL+PD FVF+ +V+ACA+LG 
Sbjct: 61  FDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGS 120

Query: 121 LRLGRQVHARFMLSSFCDDEVVKSSLIDMYAKCGQPDDARAVFDSILFKNSVSWTAMISG 180
           +  GRQVH  F++S + +DEVVKSSL+DMYAKCG  + A+AVFDSI  KN++SWTAM+SG
Sbjct: 121 IDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSG 180

Query: 181 YAKSGRKSDAIELFQRAPMKNLFSWTALISGLIQSGNGVYSFSLFNEMRREGIDIVDPLV 240
           YAKSGRK +A+ELF+  P+KNL+SWTALISG +QSG G+ +FS+F EMRRE +DI+DPLV
Sbjct: 181 YAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLV 240

Query: 241 LSSVVGACANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKVIFFRMP 300
           LSS+VGACANLA    G+Q+HGLVIALGF+SC+FISNAL+DMYAKCSD++AAK IF RM 
Sbjct: 241 LSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMR 300

Query: 301 RKDVISWTSIIVGTAQHGKAEEALTLYDDMVLTGTKPNEVTFVGLLYACSHVGLVNRGRE 360
            +DV+SWTS+IVG AQHG+AE+AL LYDDMV  G KPNEVTFVGL+YACSHVG V +GRE
Sbjct: 301 HRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRE 360

Query: 361 LFRSMVIDYRINPSLQHYTCLLDLLSRSGHLDEAENLLNEMPFKPDEPTWASLLSACKRH 420
           LF+SM  DY I PSLQHYTCLLDLL RSG LDEAENL++ MPF PDEPTWA+LLSACKR 
Sbjct: 361 LFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQ 420

Query: 421 NNMKMGVRIADH-VLNLKPEDPSTYILLSNVYAVAEMWESVSKVRKLMSSMEVRKEPGYS 480
              +MG+RIADH V + K +DPSTYILLSN+YA A +W  VS+ R+ +  MEVRK+PG+S
Sbjct: 421 GRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHS 480

Query: 481 SIDFGKESQVFHAGETCHPMKDEIFHLLKDLDAEMR-RRGYVPNTSFVLHDMEQQEKEKQ 540
           S++  KE++VF+AGET HP+K++IF LLK L+ EMR R GYVP+TS++LHDM++QEKEK 
Sbjct: 481 SVEVRKETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDEQEKEKL 540

Query: 541 LFWHSERLAMAYGLLKAVPGTIIRIVKNLRICGDCHNVLKFTSDIVKREIVVRDATRYHH 600
           LFWHSER A+AYGLLKAVPGT IRIVKNLR+CGDCH VLK  S+I +REI+VRDATRYHH
Sbjct: 541 LFWHSERSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHH 600

Query: 601 FKEGKCSCNDFW 611
           FK GKCSCNDFW
Sbjct: 601 FKGGKCSCNDFW 612

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BLAST of Lcy02g002780 vs. ExPASy Swiss-Prot
Match: Q9FRI5 (Pentatricopeptide repeat-containing protein At1g25360 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H74 PE=2 SV=1)

HSP 1 Score: 484.6 bits (1246), Expect = 1.7e-135
Identity = 250/624 (40.06%), Postives = 369/624 (59.13%), Query Frame = 0


Query: 24  KLHSQIIKAGFDKSGPLPNTLLDVYGKC----GLIPQALQLFDEMPQRDHVSWASILT-- 83
           + H+  +K+G      + N L+ VY KC     L+  A ++FDE+ ++D  SW +++T  
Sbjct: 170 QFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGY 229

Query: 84  -----------------------AHNQAI-------LPRRTLSMLSTMFMLDGLQPDHFV 143
                                  A+N  I         +  L M+  M +  G++ D F 
Sbjct: 230 VKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRM-VSSGIELDEFT 289

Query: 144 FACIVRACASLGYLRLGRQVHARFMLSSFCDDEVVKSSLIDMYAKCGQPDDARAVFDSIL 203
           +  ++RACA+ G L+LG+QVHA ++L          +SL+ +Y KCG+ D+ARA+F+ + 
Sbjct: 290 YPSVIRACATAGLLQLGKQVHA-YVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMP 349

Query: 204 FKNSVSWTAMISGYAKSGRKSDAIELFQRAPMKNLFSWTALISGLIQSGNGVYSFSLFNE 263
            K+ VSW A++SGY  SG   +A  +F+    KN+ SW  +ISGL ++G G     LF+ 
Sbjct: 350 AKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSC 409

Query: 264 MRREGIDIVDPLVLSSVVGACANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCS 323
           M+REG +  D    S  + +CA L     G+Q H  ++ +GF+S L   NAL+ MYAKC 
Sbjct: 410 MKREGFEPCD-YAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCG 469

Query: 324 DILAAKVIFFRMPRKDVISWTSIIVGTAQHGKAEEALTLYDDMVLTGTKPNEVTFVGLLY 383
            +  A+ +F  MP  D +SW ++I    QHG   EA+ +Y++M+  G +P+ +T + +L 
Sbjct: 470 VVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLT 529

Query: 384 ACSHVGLVNRGRELFRSMVIDYRINPSLQHYTCLLDLLSRSGHLDEAENLLNEMPFKPDE 443
           ACSH GLV++GR+ F SM   YRI P   HY  L+DLL RSG   +AE+++  +PFKP  
Sbjct: 530 ACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTA 589

Query: 444 PTWASLLSACKRHNNMKMGVRIADHVLNLKPEDPSTYILLSNVYAVAEMWESVSKVRKLM 503
             W +LLS C+ H NM++G+  AD +  L PE   TY+LLSN++A    WE V++VRKLM
Sbjct: 590 EIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLM 649

Query: 504 SSMEVRKEPGYSSIDFGKESQVFHAGETCHPMKDEIFHLLKDLDAEMRRRGYVPNTSFVL 563
               V+KE   S I+   +   F   +T HP  + ++  L+DL  EMRR GYVP+TSFVL
Sbjct: 650 RDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVL 709

Query: 564 HDMEQQ-EKEKQLFWHSERLAMAYGLLKAVPGTIIRIVKNLRICGDCHNVLKFTSDIVKR 611
           HD+E    KE  L  HSE++A+A+GL+K  PGT IRI KNLR CGDCHN  +F S +V+R
Sbjct: 710 HDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSWVVQR 769

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BLAST of Lcy02g002780 vs. ExPASy Swiss-Prot
Match: O23169 (Pentatricopeptide repeat-containing protein At4g37170 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H5 PE=3 SV=1)

HSP 1 Score: 472.6 bits (1215), Expect = 6.6e-132
Identity = 240/638 (37.62%), Postives = 372/638 (58.31%), Query Frame = 0


Query: 4   SHFLHELQLCARRQSVSAAGKLHSQIIKAGFDKSGPLPNTLLDVYGKC------------ 63
           S + + +Q+C++ +++    K+H  I  +GF     + N LL +Y KC            
Sbjct: 86  STYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDE 145

Query: 64  -------------------GLIPQALQLFDEMPQRDHVSWASILTAHNQAILPRRTLSML 123
                              GL+ +A +LFDEM ++D  SW +++T + +   P   L + 
Sbjct: 146 MPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLY 205

Query: 124 STMFMLDGLQPDHFVFACIVRACASLGYLRLGRQVHARFMLSSFCDDEVVKSSLIDMYAK 183
           S M  +   +P+ F  +  V A A++  +R G+++H   + +    DEV+ SSL+DMY K
Sbjct: 206 SLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGK 265

Query: 184 CGQPDDARAVFDSILFKNSVSWTAMISGYAKSGRKSDAIELFQRAPMKNLFSWTALISGL 243
           CG  D+AR +FD I+ K+ VSWT+MI  Y KS R  +   LF              + G 
Sbjct: 266 CGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSE------------LVGS 325

Query: 244 IQSGNGVYSFSLFNEMRREGIDIVDPLVLSSVVGACANLALLELGKQIHGLVIALGFESC 303
            +  N  Y+F                   + V+ ACA+L   ELGKQ+HG +  +GF+  
Sbjct: 326 CERPN-EYTF-------------------AGVLNACADLTTEELGKQVHGYMTRVGFDPY 385

Query: 304 LFISNALVDMYAKCSDILAAKVIFFRMPRKDVISWTSIIVGTAQHGKAEEALTLYDDMVL 363
            F S++LVDMY KC +I +AK +    P+ D++SWTS+I G AQ+G+ +EAL  +D ++ 
Sbjct: 386 SFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLK 445

Query: 364 TGTKPNEVTFVGLLYACSHVGLVNRGRELFRSMVIDYRINPSLQHYTCLLDLLSRSGHLD 423
           +GTKP+ VTFV +L AC+H GLV +G E F S+   +R++ +  HYTCL+DLL+RSG  +
Sbjct: 446 SGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFE 505

Query: 424 EAENLLNEMPFKPDEPTWASLLSACKRHNNMKMGVRIADHVLNLKPEDPSTYILLSNVYA 483
           + +++++EMP KP +  WAS+L  C  + N+ +    A  +  ++PE+P TY+ ++N+YA
Sbjct: 506 QLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYA 565

Query: 484 VAEMWESVSKVRKLMSSMEVRKEPGYSSIDFGKESQVFHAGETCHPMKDEIFHLLKDLDA 543
            A  WE   K+RK M  + V K PG S  +  ++  VF A +T HPM ++I   L++L  
Sbjct: 566 AAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRK 625

Query: 544 EMRRRGYVPNTSFVLHDMEQQEKEKQLFWHSERLAMAYGLLKAVPGTIIRIVKNLRICGD 603
           +M+  GYVP TS VLHD+E ++KE+ L +HSE+LA+A+ +L    GT I++ KNLR C D
Sbjct: 626 KMKEEGYVPATSLVLHDVEDEQKEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVD 685

Query: 604 CHNVLKFTSDIVKREIVVRDATRYHHFKEGKCSCNDFW 611
           CH  +KF S+I KR+I VRD+TR+H F+ G+CSC D+W
Sbjct: 686 CHGAIKFISNITKRKITVRDSTRFHCFENGQCSCGDYW 691

[Close]

BLAST of Lcy02g002780 vs. ExPASy Swiss-Prot
Match: Q9SHZ8 (Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H41 PE=3 SV=1)

HSP 1 Score: 458.4 bits (1178), Expect = 1.3e-127
Identity = 238/631 (37.72%), Postives = 370/631 (58.64%), Query Frame = 0


Query: 14  ARRQSVSAAGKLHSQIIKAGFDKSGPLPNTLLDVYGKC---------------------- 73
           A  + +    K+HS I+K G   +  + N+LL++Y KC                      
Sbjct: 157 AATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWN 216

Query: 74  ---------GLIPQALQLFDEMPQRDHVSWASILTAHNQAILPRRTLSMLSTMFMLDGLQ 133
                    G +  A+  F++M +RD V+W S+++  NQ     R L + S M     L 
Sbjct: 217 AMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLS 276

Query: 134 PDHFVFACIVRACASLGYLRLGRQVHARFMLSSFCDDEVVKSSLIDMYAKCGQPDDARAV 193
           PD F  A ++ ACA+L  L +G+Q+H+  + + F    +V ++LI MY++CG  + AR +
Sbjct: 277 PDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRL 336

Query: 194 FDSILFKN--SVSWTAMISGYAKSGRKSDAIELFQRAPMKNLFSWTALISGLIQSGNGVY 253
            +    K+     +TA++ GY K G  + A  +F     +++ +WTA+I G  Q G+   
Sbjct: 337 IEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGE 396

Query: 254 SFSLFNEMRREGIDIVDPLVLSSVVGACANLALLELGKQIHGLVIALGFESCLFISNALV 313
           + +LF  M   G    +   L++++   ++LA L  GKQIHG  +  G    + +SNAL+
Sbjct: 397 AINLFRSMVGGG-QRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALI 456

Query: 314 DMYAKCSDILAAKVIFFRMP-RKDVISWTSIIVGTAQHGKAEEALTLYDDMVLTGTKPNE 373
            MYAK  +I +A   F  +   +D +SWTS+I+  AQHG AEEAL L++ M++ G +P+ 
Sbjct: 457 TMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDH 516

Query: 374 VTFVGLLYACSHVGLVNRGRELFRSMVIDYRINPSLQHYTCLLDLLSRSGHLDEAENLLN 433
           +T+VG+  AC+H GLVN+GR+ F  M    +I P+L HY C++DL  R+G L EA+  + 
Sbjct: 517 ITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIE 576

Query: 434 EMPFKPDEPTWASLLSACKRHNNMKMGVRIADHVLNLKPEDPSTYILLSNVYAVAEMWES 493
           +MP +PD  TW SLLSAC+ H N+ +G   A+ +L L+PE+   Y  L+N+Y+    WE 
Sbjct: 577 KMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEE 636

Query: 494 VSKVRKLMSSMEVRKEPGYSSIDFGKESQVFHAGETCHPMKDEIFHLLKDLDAEMRRRGY 553
            +K+RK M    V+KE G+S I+   +  VF   +  HP K+EI+  +K +  E+++ GY
Sbjct: 637 AAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGY 696

Query: 554 VPNTSFVLHDMEQQEKEKQLFWHSERLAMAYGLLKAVPGTIIRIVKNLRICGDCHNVLKF 611
           VP+T+ VLHD+E++ KE+ L  HSE+LA+A+GL+     T +RI+KNLR+C DCH  +KF
Sbjct: 697 VPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKF 756

[Close]

BLAST of Lcy02g002780 vs. ExPASy Swiss-Prot
Match: Q9SY02 (Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H24 PE=3 SV=1)

HSP 1 Score: 453.8 bits (1166), Expect = 3.2e-126
Identity = 229/570 (40.18%), Postives = 348/570 (61.05%), Query Frame = 0


Query: 42  NTLLDVYGKCGLIPQALQLFDEMPQRDHVSWASILTAHNQAILPRRTLSMLSTMFMLDGL 101
           N LL  + K   I +A Q FD M  RD VSW +I+T + Q+      +     +F    +
Sbjct: 223 NCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQS----GKIDEARQLFDESPV 282

Query: 102 QPDHFVFACIVRACASLGYLRLGRQVHARFMLSSFCD-DEVVKSSLIDMYAKCGQPDDAR 161
           Q D F +  +V      GY++      AR +     + +EV  ++++  Y +  + + A+
Sbjct: 283 Q-DVFTWTAMVS-----GYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAK 342

Query: 162 AVFDSILFKNSVSWTAMISGYAKSGRKSDAIELFQRAPMKNLFSWTALISGLIQSGNGVY 221
            +FD +  +N  +W  MI+GYA+ G+ S+A  LF + P ++  SW A+I+G  QSG+   
Sbjct: 343 ELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFE 402

Query: 222 SFSLFNEMRREGIDIVDPLVLSSVVGACANLALLELGKQIHGLVIALGFESCLFISNALV 281
           +  LF +M REG   ++    SS +  CA++  LELGKQ+HG ++  G+E+  F+ NAL+
Sbjct: 403 ALRLFVQMEREG-GRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALL 462

Query: 282 DMYAKCSDILAAKVIFFRMPRKDVISWTSIIVGTAQHGKAEEALTLYDDMVLTGTKPNEV 341
            MY KC  I  A  +F  M  KD++SW ++I G ++HG  E AL  ++ M   G KP++ 
Sbjct: 463 LMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDA 522

Query: 342 TFVGLLYACSHVGLVNRGRELFRSMVIDYRINPSLQHYTCLLDLLSRSGHLDEAENLLNE 401
           T V +L ACSH GLV++GR+ F +M  DY + P+ QHY C++DLL R+G L++A NL+  
Sbjct: 523 TMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKN 582

Query: 402 MPFKPDEPTWASLLSACKRHNNMKMGVRIADHVLNLKPEDPSTYILLSNVYAVAEMWESV 461
           MPF+PD   W +LL A + H N ++    AD +  ++PE+   Y+LLSN+YA +  W  V
Sbjct: 583 MPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDV 642

Query: 462 SKVRKLMSSMEVRKEPGYSSIDFGKESQVFHAGETCHPMKDEIFHLLKDLDAEMRRRGYV 521
            K+R  M    V+K PGYS I+   ++  F  G+  HP KDEIF  L++LD  M++ GYV
Sbjct: 643 GKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYV 702

Query: 522 PNTSFVLHDMEQQEKEKQLFWHSERLAMAYGLLKAVPGTIIRIVKNLRICGDCHNVLKFT 581
             TS VLHD+E++EKE+ + +HSERLA+AYG+++   G  IR++KNLR+C DCHN +K+ 
Sbjct: 703 SKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYM 762

Query: 582 SDIVKREIVVRDATRYHHFKEGKCSCNDFW 611
           + I  R I++RD  R+HHFK+G CSC D+W
Sbjct: 763 ARITGRLIILRDNNRFHHFKDGSCSCGDYW 781

[Close]

BLAST of Lcy02g002780 vs. ExPASy TrEMBL
Match: A0A6J1KBS5 (pentatricopeptide repeat-containing protein At4g14050, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111492878 PE=3 SV=1)

HSP 1 Score: 1162.1 bits (3005), Expect = 0.0e+00
Identity = 565/610 (92.62%), Postives = 589/610 (96.56%), Query Frame = 0


Query: 1   MNISHFLHELQLCARRQSVSAAGKLHSQIIKAGFDKSGPLPNTLLDVYGKCGLIPQALQL 60
           MNI HFLHELQLCARRQS +AAGKLHSQIIKAG DK+GPLPNTLLDVYGKCGLIPQALQL
Sbjct: 1   MNIFHFLHELQLCARRQSTAAAGKLHSQIIKAGLDKAGPLPNTLLDVYGKCGLIPQALQL 60

Query: 61  FDEMPQRDHVSWASILTAHNQAILPRRTLSMLSTMFMLDGLQPDHFVFACIVRACASLGY 120
           FDEMP RDHVSWASILTAHN+AILPRRTLSMLS MF  DGLQPDHFVFACIV ACASLGY
Sbjct: 61  FDEMPHRDHVSWASILTAHNRAILPRRTLSMLSIMFTHDGLQPDHFVFACIVSACASLGY 120

Query: 121 LRLGRQVHARFMLSSFCDDEVVKSSLIDMYAKCGQPDDARAVFDSILFKNSVSWTAMISG 180
           LRLG+QVHARFMLSSFCDDEVVKSSLIDMYAKCG PDDARAVFDSI FKNSVSWTAMISG
Sbjct: 121 LRLGKQVHARFMLSSFCDDEVVKSSLIDMYAKCGMPDDARAVFDSISFKNSVSWTAMISG 180

Query: 181 YAKSGRKSDAIELFQRAPMKNLFSWTALISGLIQSGNGVYSFSLFNEMRREGIDIVDPLV 240
           YAKSGRKSDAIELFQR P++NLFSWTALISGLIQSGNG+YSFSLFNEMRREGID+VDPLV
Sbjct: 181 YAKSGRKSDAIELFQRVPVRNLFSWTALISGLIQSGNGIYSFSLFNEMRREGIDVVDPLV 240

Query: 241 LSSVVGACANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKVIFFRMP 300
            SSVVGACANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAK IF++MP
Sbjct: 241 FSSVVGACANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYKMP 300

Query: 301 RKDVISWTSIIVGTAQHGKAEEALTLYDDMVLTGTKPNEVTFVGLLYACSHVGLVNRGRE 360
           RKDVISWTSIIVGTAQHGKAEEAL+LYD+MVL+G KPNEVTFVGLLYACSHVGLV +GRE
Sbjct: 301 RKDVISWTSIIVGTAQHGKAEEALSLYDEMVLSGIKPNEVTFVGLLYACSHVGLVTKGRE 360

Query: 361 LFRSMVIDYRINPSLQHYTCLLDLLSRSGHLDEAENLLNEMPFKPDEPTWASLLSACKRH 420
           LFRSM  DY+INPSLQHYTCLLDLLSRSGHL+EAENLLN+MPFKPDEPTWASLLSACKRH
Sbjct: 361 LFRSMTADYKINPSLQHYTCLLDLLSRSGHLEEAENLLNKMPFKPDEPTWASLLSACKRH 420

Query: 421 NNMKMGVRIADHVLNLKPEDPSTYILLSNVYAVAEMWESVSKVRKLMSSMEVRKEPGYSS 480
           NNM+MGVRIADHVL+LKPEDPSTYILLSNVYA AEMW+SVSKVR+LMS MEVRKEPGYSS
Sbjct: 421 NNMEMGVRIADHVLDLKPEDPSTYILLSNVYAGAEMWDSVSKVRRLMSCMEVRKEPGYSS 480

Query: 481 IDFGKESQVFHAGETCHPMKDEIFHLLKDLDAEMRRRGYVPNTSFVLHDMEQQEKEKQLF 540
           IDFGKESQVFHAGET HPMK+EIFHLLKDLDA MRRRGYVPNTSFVLHDMEQQEKEKQLF
Sbjct: 481 IDFGKESQVFHAGETNHPMKEEIFHLLKDLDAGMRRRGYVPNTSFVLHDMEQQEKEKQLF 540

Query: 541 WHSERLAMAYGLLKAVPGTIIRIVKNLRICGDCHNVLKFTSDIVKREIVVRDATRYHHFK 600
           WHSERLAMAYGLLKAVPGT+IRIVKNLRICGDCHNVLKFTSDIVKREIVVRDATRYHHFK
Sbjct: 541 WHSERLAMAYGLLKAVPGTVIRIVKNLRICGDCHNVLKFTSDIVKREIVVRDATRYHHFK 600

Query: 601 EGKCSCNDFW 611
           +GKCSCNDFW
Sbjct: 601 DGKCSCNDFW 610

[Close]

BLAST of Lcy02g002780 vs. ExPASy TrEMBL
Match: A0A6J1G9N5 (pentatricopeptide repeat-containing protein At4g14050, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111452061 PE=3 SV=1)

HSP 1 Score: 1161.7 bits (3004), Expect = 0.0e+00
Identity = 564/610 (92.46%), Postives = 589/610 (96.56%), Query Frame = 0


Query: 1   MNISHFLHELQLCARRQSVSAAGKLHSQIIKAGFDKSGPLPNTLLDVYGKCGLIPQALQL 60
           MNI HFLHELQLCARRQS +AAGKLHSQIIKAG DK+GPL NTLLDVYGKCGLIPQALQL
Sbjct: 1   MNIFHFLHELQLCARRQSTAAAGKLHSQIIKAGLDKAGPLANTLLDVYGKCGLIPQALQL 60

Query: 61  FDEMPQRDHVSWASILTAHNQAILPRRTLSMLSTMFMLDGLQPDHFVFACIVRACASLGY 120
           FDEMP RDHVSWASILTAHN+AILPRRTLSMLS MF  DGLQPDHFVFACIV ACASLGY
Sbjct: 61  FDEMPHRDHVSWASILTAHNRAILPRRTLSMLSIMFTHDGLQPDHFVFACIVSACASLGY 120

Query: 121 LRLGRQVHARFMLSSFCDDEVVKSSLIDMYAKCGQPDDARAVFDSILFKNSVSWTAMISG 180
           LRLG+QVHARFMLSSFCDDEVVKSSLIDMYAKCG PDDARAVFDSILFKNSVSWTAMISG
Sbjct: 121 LRLGKQVHARFMLSSFCDDEVVKSSLIDMYAKCGMPDDARAVFDSILFKNSVSWTAMISG 180

Query: 181 YAKSGRKSDAIELFQRAPMKNLFSWTALISGLIQSGNGVYSFSLFNEMRREGIDIVDPLV 240
           YAKSGRKSDAIELFQR P++NLFSWTALISGLIQSGNG+YSFSLFNEMRREGID+VDPLV
Sbjct: 181 YAKSGRKSDAIELFQRVPVRNLFSWTALISGLIQSGNGIYSFSLFNEMRREGIDVVDPLV 240

Query: 241 LSSVVGACANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKVIFFRMP 300
            SSVVGACANLALLELGKQ+HGLVIA+GFESCLFISN LVDMYAKCSDILAAK IF++MP
Sbjct: 241 FSSVVGACANLALLELGKQMHGLVIAIGFESCLFISNTLVDMYAKCSDILAAKDIFYKMP 300

Query: 301 RKDVISWTSIIVGTAQHGKAEEALTLYDDMVLTGTKPNEVTFVGLLYACSHVGLVNRGRE 360
           RKDVISWTSIIVGTAQHGKAEEAL+LYD+MVL+G KPNEVTFVGLLYACSHVGLV +GRE
Sbjct: 301 RKDVISWTSIIVGTAQHGKAEEALSLYDEMVLSGIKPNEVTFVGLLYACSHVGLVTKGRE 360

Query: 361 LFRSMVIDYRINPSLQHYTCLLDLLSRSGHLDEAENLLNEMPFKPDEPTWASLLSACKRH 420
           LFRSM  DY+INPSLQHYTCLLDLLSRSGHL+EAENLLN+MPFKPDEPTWASLLSACKRH
Sbjct: 361 LFRSMTADYKINPSLQHYTCLLDLLSRSGHLEEAENLLNKMPFKPDEPTWASLLSACKRH 420

Query: 421 NNMKMGVRIADHVLNLKPEDPSTYILLSNVYAVAEMWESVSKVRKLMSSMEVRKEPGYSS 480
           NNM+MGVRIADHVL+LKP+DPSTYILLSNVYA AEMWESVSKVR+LMS MEVRKEPGYSS
Sbjct: 421 NNMEMGVRIADHVLDLKPKDPSTYILLSNVYAGAEMWESVSKVRRLMSCMEVRKEPGYSS 480

Query: 481 IDFGKESQVFHAGETCHPMKDEIFHLLKDLDAEMRRRGYVPNTSFVLHDMEQQEKEKQLF 540
           IDFGKESQVFHAGET HPMKDEIFHLLKDLDAEMRRRGYVPNTSFVLHDMEQQEKEKQLF
Sbjct: 481 IDFGKESQVFHAGETNHPMKDEIFHLLKDLDAEMRRRGYVPNTSFVLHDMEQQEKEKQLF 540

Query: 541 WHSERLAMAYGLLKAVPGTIIRIVKNLRICGDCHNVLKFTSDIVKREIVVRDATRYHHFK 600
           WHSERLAMAYGLLKAVPGT+IRIVKNLRICGDCHNVLKFTSDIVKREIVVRDATRYHHFK
Sbjct: 541 WHSERLAMAYGLLKAVPGTVIRIVKNLRICGDCHNVLKFTSDIVKREIVVRDATRYHHFK 600

Query: 601 EGKCSCNDFW 611
           +GKCSCNDFW
Sbjct: 601 DGKCSCNDFW 610

[Close]

BLAST of Lcy02g002780 vs. ExPASy TrEMBL
Match: A0A6J1CPR6 (pentatricopeptide repeat-containing protein At4g14050, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111013178 PE=3 SV=1)

HSP 1 Score: 1155.6 bits (2988), Expect = 0.0e+00
Identity = 567/610 (92.95%), Postives = 584/610 (95.74%), Query Frame = 0


Query: 1   MNISHFLHELQLCARRQSVSAAGKLHSQIIKAGFDKSGPLPNTLLDVYGKCGLIPQALQL 60
           MN+SHFLHELQLCARRQS SAAGKLHSQIIK G  + GPLPNTLLDVYGKCGLIPQALQL
Sbjct: 1   MNVSHFLHELQLCARRQSASAAGKLHSQIIKTGLVQYGPLPNTLLDVYGKCGLIPQALQL 60

Query: 61  FDEMPQRDHVSWASILTAHNQAILPRRTLSMLSTMFMLDGLQPDHFVFACIVRACASLGY 120
           FDEMP RDHVSWASILTAHNQAILPRRTLSML+TM  LDGLQPDHF+FA IVRACASLG 
Sbjct: 61  FDEMPHRDHVSWASILTAHNQAILPRRTLSMLNTMLALDGLQPDHFIFASIVRACASLGI 120

Query: 121 LRLGRQVHARFMLSSFCDDEVVKSSLIDMYAKCGQPDDARAVFDSILFKNSVSWTAMISG 180
           LRLG+QVHARFMLSSF DDEVVKSSLIDMYAKC QPDDARAVFDSILFKNSVSWTAMISG
Sbjct: 121 LRLGKQVHARFMLSSFYDDEVVKSSLIDMYAKCRQPDDARAVFDSILFKNSVSWTAMISG 180

Query: 181 YAKSGRKSDAIELFQRAPMKNLFSWTALISGLIQSGNGVYSFSLFNEMRREGIDIVDPLV 240
           YA+SGRKSDAIELF R P++NLFSWTALISGLIQSGNG+YSFSLF+EMRREGIDIVDPLV
Sbjct: 181 YARSGRKSDAIELFHRVPVRNLFSWTALISGLIQSGNGMYSFSLFSEMRREGIDIVDPLV 240

Query: 241 LSSVVGACANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKVIFFRMP 300
           LSSVVGACANLALLELGKQIH LVIALGFESCLFISNALVDMYAKCSDILAAK IF  MP
Sbjct: 241 LSSVVGACANLALLELGKQIHCLVIALGFESCLFISNALVDMYAKCSDILAAKDIFLGMP 300

Query: 301 RKDVISWTSIIVGTAQHGKAEEALTLYDDMVLTGTKPNEVTFVGLLYACSHVGLVNRGRE 360
           RKDVISWTSIIVGTAQHG+AEEAL LYD+MVL G KPNEVTFVGLLYACSH GLVNRGRE
Sbjct: 301 RKDVISWTSIIVGTAQHGQAEEALALYDEMVLAGVKPNEVTFVGLLYACSHAGLVNRGRE 360

Query: 361 LFRSMVIDYRINPSLQHYTCLLDLLSRSGHLDEAENLLNEMPFKPDEPTWASLLSACKRH 420
           LFRSMV DYRINPSLQHYTCLLDLLSRSGHLDEAE+++NEMPFKPDEPTWASLLSACKRH
Sbjct: 361 LFRSMVADYRINPSLQHYTCLLDLLSRSGHLDEAESIINEMPFKPDEPTWASLLSACKRH 420

Query: 421 NNMKMGVRIADHVLNLKPEDPSTYILLSNVYAVAEMWESVSKVRKLMSSMEVRKEPGYSS 480
           N MKMGVRIADHVL+LKPEDPSTYILLSNVYA AEMWESVSKVRKLMSSMEVRKEPGYSS
Sbjct: 421 NXMKMGVRIADHVLDLKPEDPSTYILLSNVYASAEMWESVSKVRKLMSSMEVRKEPGYSS 480

Query: 481 IDFGKESQVFHAGETCHPMKDEIFHLLKDLDAEMRRRGYVPNTSFVLHDMEQQEKEKQLF 540
           IDFGKESQVFHAGETCHPM+DEIFHLLKDLDAEMRRRGYVPNTSFVLHDMEQQEKEKQLF
Sbjct: 481 IDFGKESQVFHAGETCHPMRDEIFHLLKDLDAEMRRRGYVPNTSFVLHDMEQQEKEKQLF 540

Query: 541 WHSERLAMAYGLLKAVPGTIIRIVKNLRICGDCHNVLKFTSDIVKREIVVRDATRYHHFK 600
           WHSERLAMAYGLLKAVPGTIIRIVKNLRICGDCHNVLKF SDIVKREIVVRDATRYHHFK
Sbjct: 541 WHSERLAMAYGLLKAVPGTIIRIVKNLRICGDCHNVLKFASDIVKREIVVRDATRYHHFK 600

Query: 601 EGKCSCNDFW 611
           EGKCSCNDFW
Sbjct: 601 EGKCSCNDFW 610

[Close]

BLAST of Lcy02g002780 vs. ExPASy TrEMBL
Match: A0A1S3BZM7 (LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At4g14050, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103494781 PE=3 SV=1)

HSP 1 Score: 1128.2 bits (2917), Expect = 0.0e+00
Identity = 549/611 (89.85%), Postives = 586/611 (95.91%), Query Frame = 0


Query: 1   MNISHFLHELQLCARRQSVSAAGKLHSQIIKAGFDKSGPLPNTLLDVYGKCGLIPQALQL 60
           MNISHFLH+LQLCARRQS SAAGKLHSQIIKAGFDKS  L NTLLDVYGKCGLIPQALQL
Sbjct: 1   MNISHFLHQLQLCARRQSASAAGKLHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQL 60

Query: 61  FDEMPQRDHVSWASILTAHNQAILPRRTLSMLSTMFMLDGLQPDHFVFACIVRACASLGY 120
           FDEMP RDHVSWASILTAHN+A++PRRTLSML+ MF  DGLQPDHFVFACIVRAC+SLGY
Sbjct: 61  FDEMPHRDHVSWASILTAHNKALIPRRTLSMLNIMFTNDGLQPDHFVFACIVRACSSLGY 120

Query: 121 LRLGRQVHARFMLSSFCDDEVVKSSLIDMYAKCGQPDDARAVFDSILFKNSVSWTAMISG 180
           LRLG+QVHARFMLS FCDDEVVKSSLIDMY KCGQPDDARAVFDSILFKNSVSWT+MISG
Sbjct: 121 LRLGKQVHARFMLSXFCDDEVVKSSLIDMYTKCGQPDDARAVFDSILFKNSVSWTSMISG 180

Query: 181 YAKSGRKSDAIELFQRAPMKNLFSWTALISGLIQSGNGVYSFSLFNEMRREGIDIVDPLV 240
           YA+SGRK +A++LF + P++NLFSWTALISGLIQSG+G++SFSLFNEMRREGIDIVDPLV
Sbjct: 181 YARSGRKCEAMDLFLQVPVRNLFSWTALISGLIQSGHGIFSFSLFNEMRREGIDIVDPLV 240

Query: 241 LSSVVGACANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKVIFFRMP 300
           LSSVVG CANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAK IF+RMP
Sbjct: 241 LSSVVGGCANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMP 300

Query: 301 RKDVISWTSIIVGTAQHGKAEEALTLYDDMVLTGTKPNEVTFVGLLYACSHVGLVNRGRE 360
           RKDVISWTSIIVGTAQHGKAEEALTLYD+MVL+  KPNEVTFVGLLYACSH GLV+RGRE
Sbjct: 301 RKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRE 360

Query: 361 LFRSMVIDYRINPSLQHYTCLLDLLSRSGHLDEAENLLNEMPFKPDEPTWASLLSACKRH 420
           LFRSM  DY INPSLQHYTCLLDLLSRSGHLDEAENLLNE+PFKPDEPTWASLLSACKRH
Sbjct: 361 LFRSMTTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLNEIPFKPDEPTWASLLSACKRH 420

Query: 421 NNMKMGVRIADHVLNLKPEDPSTYILLSNVYAVAEMWESVSKVRKLMSSMEVRKEPGYSS 480
           NN++MGVRIAD +L+LKPEDPSTYILLSNVYA AEMWESVSKVRKLM+SMEVRK+PGYSS
Sbjct: 421 NNLEMGVRIADRLLDLKPEDPSTYILLSNVYAGAEMWESVSKVRKLMNSMEVRKKPGYSS 480

Query: 481 IDFGKESQVFHAGETC-HPMKDEIFHLLKDLDAEMRRRGYVPNTSFVLHDMEQQEKEKQL 540
           IDFGK+SQVFHAGE+C HPMK+EIF+LLKDLDAEMR+RGYVPNTSFVL+D+EQQEKEKQL
Sbjct: 481 IDFGKDSQVFHAGESCDHPMKNEIFNLLKDLDAEMRKRGYVPNTSFVLYDIEQQEKEKQL 540

Query: 541 FWHSERLAMAYGLLKAVPGTIIRIVKNLRICGDCHNVLKFTSDIVKREIVVRDATRYHHF 600
           FWHSERLA+AYGLLKAVPGTIIRIVKNLRICGDCHNVLKF SDIVKREIVVRDATRYHHF
Sbjct: 541 FWHSERLAVAYGLLKAVPGTIIRIVKNLRICGDCHNVLKFISDIVKREIVVRDATRYHHF 600

Query: 601 KEGKCSCNDFW 611
           KEGKCSCNDFW
Sbjct: 601 KEGKCSCNDFW 611

[Close]

BLAST of Lcy02g002780 vs. ExPASy TrEMBL
Match: A0A5D3E178 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G00970 PE=3 SV=1)

HSP 1 Score: 1127.9 bits (2916), Expect = 0.0e+00
Identity = 549/611 (89.85%), Postives = 586/611 (95.91%), Query Frame = 0


Query: 1   MNISHFLHELQLCARRQSVSAAGKLHSQIIKAGFDKSGPLPNTLLDVYGKCGLIPQALQL 60
           MNISHFLH+LQLCARRQS SAAGKLHSQIIKAGFDKS  L NTLLDVYGKCGLIPQALQL
Sbjct: 1   MNISHFLHQLQLCARRQSASAAGKLHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQL 60

Query: 61  FDEMPQRDHVSWASILTAHNQAILPRRTLSMLSTMFMLDGLQPDHFVFACIVRACASLGY 120
           FDEMP RDHVSWASILTAHN+A++PRRTLSML+ MF  DGLQPDHFVFACIVRAC+SLGY
Sbjct: 61  FDEMPHRDHVSWASILTAHNKALIPRRTLSMLNIMFTNDGLQPDHFVFACIVRACSSLGY 120

Query: 121 LRLGRQVHARFMLSSFCDDEVVKSSLIDMYAKCGQPDDARAVFDSILFKNSVSWTAMISG 180
           LRLG+QVHARFMLS FCDDEVVKSSLIDMY KCGQPDDARAVFDSILFKNSVSWT+MISG
Sbjct: 121 LRLGKQVHARFMLSFFCDDEVVKSSLIDMYTKCGQPDDARAVFDSILFKNSVSWTSMISG 180

Query: 181 YAKSGRKSDAIELFQRAPMKNLFSWTALISGLIQSGNGVYSFSLFNEMRREGIDIVDPLV 240
           YA+SGRK +A++LF + P++NLFSWTALISGLIQSG+G++SFSLFNEMRREGIDIVDPLV
Sbjct: 181 YARSGRKCEAMDLFLQVPVRNLFSWTALISGLIQSGHGIFSFSLFNEMRREGIDIVDPLV 240

Query: 241 LSSVVGACANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKVIFFRMP 300
           LSSVVG CANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAK IF+RMP
Sbjct: 241 LSSVVGGCANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMP 300

Query: 301 RKDVISWTSIIVGTAQHGKAEEALTLYDDMVLTGTKPNEVTFVGLLYACSHVGLVNRGRE 360
           RKDVISWTSIIVGTAQHGKAEEALTLYD+MVL+  KPNEVTFVGLLYACSH GLV+RGRE
Sbjct: 301 RKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRE 360

Query: 361 LFRSMVIDYRINPSLQHYTCLLDLLSRSGHLDEAENLLNEMPFKPDEPTWASLLSACKRH 420
           LFRSM  DY INPSLQHYTCLLDLLSRSGHLDEAENLLNE+PFKPDEPTWASLLSACKRH
Sbjct: 361 LFRSMTTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLNEIPFKPDEPTWASLLSACKRH 420

Query: 421 NNMKMGVRIADHVLNLKPEDPSTYILLSNVYAVAEMWESVSKVRKLMSSMEVRKEPGYSS 480
           NN++MGVRIAD +L+LKPEDPSTYILLSNVYA AEMWESVSKVRKLM+SMEVRK+PGYSS
Sbjct: 421 NNLEMGVRIADRLLDLKPEDPSTYILLSNVYAGAEMWESVSKVRKLMNSMEVRKKPGYSS 480

Query: 481 IDFGKESQVFHAGETC-HPMKDEIFHLLKDLDAEMRRRGYVPNTSFVLHDMEQQEKEKQL 540
           IDFGK+SQVFHAGE+C HPMK+EIF+LLKDLDAEMR+RGYVPNTSFVL+D+EQQEKEKQL
Sbjct: 481 IDFGKDSQVFHAGESCDHPMKNEIFNLLKDLDAEMRKRGYVPNTSFVLYDIEQQEKEKQL 540

Query: 541 FWHSERLAMAYGLLKAVPGTIIRIVKNLRICGDCHNVLKFTSDIVKREIVVRDATRYHHF 600
           FWHSERLA+AYGLLKAVPGTIIRIVKNLRICGDCHNVLKF SDIVKREIVVRDATRYHHF
Sbjct: 541 FWHSERLAVAYGLLKAVPGTIIRIVKNLRICGDCHNVLKFISDIVKREIVVRDATRYHHF 600

Query: 601 KEGKCSCNDFW 611
           KEGKCSCNDFW
Sbjct: 601 KEGKCSCNDFW 611

[Close]

BLAST of Lcy02g002780 vs. NCBI nr
Match: XP_038903469.1 (pentatricopeptide repeat-containing protein At4g14050, mitochondrial [Benincasa hispida])

HSP 1 Score: 1177.2 bits (3044), Expect = 0.0e+00
Identity = 574/610 (94.10%), Postives = 594/610 (97.38%), Query Frame = 0


Query: 1   MNISHFLHELQLCARRQSVSAAGKLHSQIIKAGFDKSGPLPNTLLDVYGKCGLIPQALQL 60
           MNISHFLHELQLC RRQS SAAGKLHSQIIKAGF+KSGPLPNTLLDVYGKCGLIPQALQL
Sbjct: 1   MNISHFLHELQLCTRRQSASAAGKLHSQIIKAGFEKSGPLPNTLLDVYGKCGLIPQALQL 60

Query: 61  FDEMPQRDHVSWASILTAHNQAILPRRTLSMLSTMFMLDGLQPDHFVFACIVRACASLGY 120
           FDEMPQRDHVSWASILTAHNQAILPRRTLSML+TMF LDGLQPDHFVFACIVRACASLGY
Sbjct: 61  FDEMPQRDHVSWASILTAHNQAILPRRTLSMLNTMFTLDGLQPDHFVFACIVRACASLGY 120

Query: 121 LRLGRQVHARFMLSSFCDDEVVKSSLIDMYAKCGQPDDARAVFDSILFKNSVSWTAMISG 180
           LRLG+QVHARFMLSSFCDDEVVKSSLIDMYAKC QPDDARAVFDSILFKNSVSWTAMISG
Sbjct: 121 LRLGKQVHARFMLSSFCDDEVVKSSLIDMYAKCAQPDDARAVFDSILFKNSVSWTAMISG 180

Query: 181 YAKSGRKSDAIELFQRAPMKNLFSWTALISGLIQSGNGVYSFSLFNEMRREGIDIVDPLV 240
           YA+SGRK +AIELFQR PM+NLFSWTALISGLIQSGNG+YSFSLFNEMRREGIDIVDPLV
Sbjct: 181 YARSGRKCEAIELFQRVPMRNLFSWTALISGLIQSGNGIYSFSLFNEMRREGIDIVDPLV 240

Query: 241 LSSVVGACANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKVIFFRMP 300
           LSSVVGACANLALLELGKQIHGLVIALGFESCL+ISNA VDMYAKCSD+LAAK IF+RMP
Sbjct: 241 LSSVVGACANLALLELGKQIHGLVIALGFESCLYISNAFVDMYAKCSDLLAAKDIFYRMP 300

Query: 301 RKDVISWTSIIVGTAQHGKAEEALTLYDDMVLTGTKPNEVTFVGLLYACSHVGLVNRGRE 360
           RKDVISWTSIIVGTAQHGKAEEALTLYD+MVL+  KPNEVTF+GLLYACSHVGLV+RGRE
Sbjct: 301 RKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRVKPNEVTFIGLLYACSHVGLVSRGRE 360

Query: 361 LFRSMVIDYRINPSLQHYTCLLDLLSRSGHLDEAENLLNEMPFKPDEPTWASLLSACKRH 420
           LFRSM IDYRINPSLQHYTCLLDLLSRSGHLDEAENLLNEMPFKPDEPTWASLLSACKRH
Sbjct: 361 LFRSMTIDYRINPSLQHYTCLLDLLSRSGHLDEAENLLNEMPFKPDEPTWASLLSACKRH 420

Query: 421 NNMKMGVRIADHVLNLKPEDPSTYILLSNVYAVAEMWESVSKVRKLMSSMEVRKEPGYSS 480
           NN+KMGVRIADHVL+LKPEDPSTYILLSNVYA AEMWESVSKVRKLMSSMEVRKEPGYSS
Sbjct: 421 NNLKMGVRIADHVLDLKPEDPSTYILLSNVYAGAEMWESVSKVRKLMSSMEVRKEPGYSS 480

Query: 481 IDFGKESQVFHAGETCHPMKDEIFHLLKDLDAEMRRRGYVPNTSFVLHDMEQQEKEKQLF 540
           IDFGKESQVFHAGE+CH MKDEIF+LLKDLDAEMRRRGYVPNTSFVLHDME QEKEKQLF
Sbjct: 481 IDFGKESQVFHAGESCHLMKDEIFNLLKDLDAEMRRRGYVPNTSFVLHDMEPQEKEKQLF 540

Query: 541 WHSERLAMAYGLLKAVPGTIIRIVKNLRICGDCHNVLKFTSDIVKREIVVRDATRYHHFK 600
           WHSERLA+AYGLLKAVPGTIIRIVKNLRICGDCHNVLKF SDI +REIVVRDATRYHHFK
Sbjct: 541 WHSERLAVAYGLLKAVPGTIIRIVKNLRICGDCHNVLKFISDIKQREIVVRDATRYHHFK 600

Query: 601 EGKCSCNDFW 611
           EGKCSCNDFW
Sbjct: 601 EGKCSCNDFW 610

[Close]

BLAST of Lcy02g002780 vs. NCBI nr
Match: XP_023523455.1 (pentatricopeptide repeat-containing protein At4g14050, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1163.3 bits (3008), Expect = 0.0e+00
Identity = 564/610 (92.46%), Postives = 589/610 (96.56%), Query Frame = 0


Query: 1   MNISHFLHELQLCARRQSVSAAGKLHSQIIKAGFDKSGPLPNTLLDVYGKCGLIPQALQL 60
           MNI HFLHELQLCARRQS +AAGKLHSQIIKAGFDK+GPLPNTLLDVYGKCGLIPQALQL
Sbjct: 1   MNIFHFLHELQLCARRQSTAAAGKLHSQIIKAGFDKAGPLPNTLLDVYGKCGLIPQALQL 60

Query: 61  FDEMPQRDHVSWASILTAHNQAILPRRTLSMLSTMFMLDGLQPDHFVFACIVRACASLGY 120
           FDEMP RDHVSWASILTAHN+AILPRRTLSMLS MF  DGLQPDHFVFACIV ACASLGY
Sbjct: 61  FDEMPHRDHVSWASILTAHNRAILPRRTLSMLSIMFTRDGLQPDHFVFACIVSACASLGY 120

Query: 121 LRLGRQVHARFMLSSFCDDEVVKSSLIDMYAKCGQPDDARAVFDSILFKNSVSWTAMISG 180
           LRLG+QVHARFMLSSFCDDEVVKSSLIDMYAKCG PDDARAVFDSILFKNSVSWTAMISG
Sbjct: 121 LRLGKQVHARFMLSSFCDDEVVKSSLIDMYAKCGMPDDARAVFDSILFKNSVSWTAMISG 180

Query: 181 YAKSGRKSDAIELFQRAPMKNLFSWTALISGLIQSGNGVYSFSLFNEMRREGIDIVDPLV 240
           YAKSGRKSDAIELFQR P++NLFSWTALISGLIQSGNG+YSFSLFNEMRREGID+VDPLV
Sbjct: 181 YAKSGRKSDAIELFQRVPVRNLFSWTALISGLIQSGNGIYSFSLFNEMRREGIDVVDPLV 240

Query: 241 LSSVVGACANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKVIFFRMP 300
            SSVVGACANLALLELGKQ+HGLVIA+GFESCLFISN LVDMYAKCSDILAAK IF++MP
Sbjct: 241 FSSVVGACANLALLELGKQMHGLVIAIGFESCLFISNTLVDMYAKCSDILAAKDIFYKMP 300

Query: 301 RKDVISWTSIIVGTAQHGKAEEALTLYDDMVLTGTKPNEVTFVGLLYACSHVGLVNRGRE 360
           RKDVISWTSIIVGTAQHGKAEEAL+LYD+MVL+G KPNEVTFVGLLYACSHVGLV +GRE
Sbjct: 301 RKDVISWTSIIVGTAQHGKAEEALSLYDEMVLSGIKPNEVTFVGLLYACSHVGLVTKGRE 360

Query: 361 LFRSMVIDYRINPSLQHYTCLLDLLSRSGHLDEAENLLNEMPFKPDEPTWASLLSACKRH 420
           LFRSM  DY+INPSLQHYTCLLDLLSRSGHL+EAENLLN+MPFKPDEPTWASLLSACKRH
Sbjct: 361 LFRSMTADYKINPSLQHYTCLLDLLSRSGHLEEAENLLNKMPFKPDEPTWASLLSACKRH 420

Query: 421 NNMKMGVRIADHVLNLKPEDPSTYILLSNVYAVAEMWESVSKVRKLMSSMEVRKEPGYSS 480
           NNM+MGVRIADHVL+LKPEDPSTY+LLSNVYA A MWESVSKVR+LMS MEVRKEPGYSS
Sbjct: 421 NNMEMGVRIADHVLDLKPEDPSTYVLLSNVYAGAGMWESVSKVRRLMSCMEVRKEPGYSS 480

Query: 481 IDFGKESQVFHAGETCHPMKDEIFHLLKDLDAEMRRRGYVPNTSFVLHDMEQQEKEKQLF 540
           IDFGKESQVFHAGET HPMKDEIFHLLKDLDAEMRRRGYVPNTSFVLHDM QQEKEKQLF
Sbjct: 481 IDFGKESQVFHAGETNHPMKDEIFHLLKDLDAEMRRRGYVPNTSFVLHDMVQQEKEKQLF 540

Query: 541 WHSERLAMAYGLLKAVPGTIIRIVKNLRICGDCHNVLKFTSDIVKREIVVRDATRYHHFK 600
           WHSERLAMAYGLLKAVPGT+IRIVKNLRICGDCHNVLKFTSDIVKREIVVRDATRYHHFK
Sbjct: 541 WHSERLAMAYGLLKAVPGTVIRIVKNLRICGDCHNVLKFTSDIVKREIVVRDATRYHHFK 600

Query: 601 EGKCSCNDFW 611
           +GKCSCNDFW
Sbjct: 601 DGKCSCNDFW 610

[Close]

BLAST of Lcy02g002780 vs. NCBI nr
Match: XP_022998145.1 (pentatricopeptide repeat-containing protein At4g14050, mitochondrial [Cucurbita maxima])

HSP 1 Score: 1162.1 bits (3005), Expect = 0.0e+00
Identity = 565/610 (92.62%), Postives = 589/610 (96.56%), Query Frame = 0


Query: 1   MNISHFLHELQLCARRQSVSAAGKLHSQIIKAGFDKSGPLPNTLLDVYGKCGLIPQALQL 60
           MNI HFLHELQLCARRQS +AAGKLHSQIIKAG DK+GPLPNTLLDVYGKCGLIPQALQL
Sbjct: 1   MNIFHFLHELQLCARRQSTAAAGKLHSQIIKAGLDKAGPLPNTLLDVYGKCGLIPQALQL 60

Query: 61  FDEMPQRDHVSWASILTAHNQAILPRRTLSMLSTMFMLDGLQPDHFVFACIVRACASLGY 120
           FDEMP RDHVSWASILTAHN+AILPRRTLSMLS MF  DGLQPDHFVFACIV ACASLGY
Sbjct: 61  FDEMPHRDHVSWASILTAHNRAILPRRTLSMLSIMFTHDGLQPDHFVFACIVSACASLGY 120

Query: 121 LRLGRQVHARFMLSSFCDDEVVKSSLIDMYAKCGQPDDARAVFDSILFKNSVSWTAMISG 180
           LRLG+QVHARFMLSSFCDDEVVKSSLIDMYAKCG PDDARAVFDSI FKNSVSWTAMISG
Sbjct: 121 LRLGKQVHARFMLSSFCDDEVVKSSLIDMYAKCGMPDDARAVFDSISFKNSVSWTAMISG 180

Query: 181 YAKSGRKSDAIELFQRAPMKNLFSWTALISGLIQSGNGVYSFSLFNEMRREGIDIVDPLV 240
           YAKSGRKSDAIELFQR P++NLFSWTALISGLIQSGNG+YSFSLFNEMRREGID+VDPLV
Sbjct: 181 YAKSGRKSDAIELFQRVPVRNLFSWTALISGLIQSGNGIYSFSLFNEMRREGIDVVDPLV 240

Query: 241 LSSVVGACANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKVIFFRMP 300
            SSVVGACANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAK IF++MP
Sbjct: 241 FSSVVGACANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYKMP 300

Query: 301 RKDVISWTSIIVGTAQHGKAEEALTLYDDMVLTGTKPNEVTFVGLLYACSHVGLVNRGRE 360
           RKDVISWTSIIVGTAQHGKAEEAL+LYD+MVL+G KPNEVTFVGLLYACSHVGLV +GRE
Sbjct: 301 RKDVISWTSIIVGTAQHGKAEEALSLYDEMVLSGIKPNEVTFVGLLYACSHVGLVTKGRE 360

Query: 361 LFRSMVIDYRINPSLQHYTCLLDLLSRSGHLDEAENLLNEMPFKPDEPTWASLLSACKRH 420
           LFRSM  DY+INPSLQHYTCLLDLLSRSGHL+EAENLLN+MPFKPDEPTWASLLSACKRH
Sbjct: 361 LFRSMTADYKINPSLQHYTCLLDLLSRSGHLEEAENLLNKMPFKPDEPTWASLLSACKRH 420

Query: 421 NNMKMGVRIADHVLNLKPEDPSTYILLSNVYAVAEMWESVSKVRKLMSSMEVRKEPGYSS 480
           NNM+MGVRIADHVL+LKPEDPSTYILLSNVYA AEMW+SVSKVR+LMS MEVRKEPGYSS
Sbjct: 421 NNMEMGVRIADHVLDLKPEDPSTYILLSNVYAGAEMWDSVSKVRRLMSCMEVRKEPGYSS 480

Query: 481 IDFGKESQVFHAGETCHPMKDEIFHLLKDLDAEMRRRGYVPNTSFVLHDMEQQEKEKQLF 540
           IDFGKESQVFHAGET HPMK+EIFHLLKDLDA MRRRGYVPNTSFVLHDMEQQEKEKQLF
Sbjct: 481 IDFGKESQVFHAGETNHPMKEEIFHLLKDLDAGMRRRGYVPNTSFVLHDMEQQEKEKQLF 540

Query: 541 WHSERLAMAYGLLKAVPGTIIRIVKNLRICGDCHNVLKFTSDIVKREIVVRDATRYHHFK 600
           WHSERLAMAYGLLKAVPGT+IRIVKNLRICGDCHNVLKFTSDIVKREIVVRDATRYHHFK
Sbjct: 541 WHSERLAMAYGLLKAVPGTVIRIVKNLRICGDCHNVLKFTSDIVKREIVVRDATRYHHFK 600

Query: 601 EGKCSCNDFW 611
           +GKCSCNDFW
Sbjct: 601 DGKCSCNDFW 610

[Close]

BLAST of Lcy02g002780 vs. NCBI nr
Match: XP_022948359.1 (pentatricopeptide repeat-containing protein At4g14050, mitochondrial [Cucurbita moschata])

HSP 1 Score: 1161.7 bits (3004), Expect = 0.0e+00
Identity = 564/610 (92.46%), Postives = 589/610 (96.56%), Query Frame = 0


Query: 1   MNISHFLHELQLCARRQSVSAAGKLHSQIIKAGFDKSGPLPNTLLDVYGKCGLIPQALQL 60
           MNI HFLHELQLCARRQS +AAGKLHSQIIKAG DK+GPL NTLLDVYGKCGLIPQALQL
Sbjct: 1   MNIFHFLHELQLCARRQSTAAAGKLHSQIIKAGLDKAGPLANTLLDVYGKCGLIPQALQL 60

Query: 61  FDEMPQRDHVSWASILTAHNQAILPRRTLSMLSTMFMLDGLQPDHFVFACIVRACASLGY 120
           FDEMP RDHVSWASILTAHN+AILPRRTLSMLS MF  DGLQPDHFVFACIV ACASLGY
Sbjct: 61  FDEMPHRDHVSWASILTAHNRAILPRRTLSMLSIMFTHDGLQPDHFVFACIVSACASLGY 120

Query: 121 LRLGRQVHARFMLSSFCDDEVVKSSLIDMYAKCGQPDDARAVFDSILFKNSVSWTAMISG 180
           LRLG+QVHARFMLSSFCDDEVVKSSLIDMYAKCG PDDARAVFDSILFKNSVSWTAMISG
Sbjct: 121 LRLGKQVHARFMLSSFCDDEVVKSSLIDMYAKCGMPDDARAVFDSILFKNSVSWTAMISG 180

Query: 181 YAKSGRKSDAIELFQRAPMKNLFSWTALISGLIQSGNGVYSFSLFNEMRREGIDIVDPLV 240
           YAKSGRKSDAIELFQR P++NLFSWTALISGLIQSGNG+YSFSLFNEMRREGID+VDPLV
Sbjct: 181 YAKSGRKSDAIELFQRVPVRNLFSWTALISGLIQSGNGIYSFSLFNEMRREGIDVVDPLV 240

Query: 241 LSSVVGACANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKVIFFRMP 300
            SSVVGACANLALLELGKQ+HGLVIA+GFESCLFISN LVDMYAKCSDILAAK IF++MP
Sbjct: 241 FSSVVGACANLALLELGKQMHGLVIAIGFESCLFISNTLVDMYAKCSDILAAKDIFYKMP 300

Query: 301 RKDVISWTSIIVGTAQHGKAEEALTLYDDMVLTGTKPNEVTFVGLLYACSHVGLVNRGRE 360
           RKDVISWTSIIVGTAQHGKAEEAL+LYD+MVL+G KPNEVTFVGLLYACSHVGLV +GRE
Sbjct: 301 RKDVISWTSIIVGTAQHGKAEEALSLYDEMVLSGIKPNEVTFVGLLYACSHVGLVTKGRE 360

Query: 361 LFRSMVIDYRINPSLQHYTCLLDLLSRSGHLDEAENLLNEMPFKPDEPTWASLLSACKRH 420
           LFRSM  DY+INPSLQHYTCLLDLLSRSGHL+EAENLLN+MPFKPDEPTWASLLSACKRH
Sbjct: 361 LFRSMTADYKINPSLQHYTCLLDLLSRSGHLEEAENLLNKMPFKPDEPTWASLLSACKRH 420

Query: 421 NNMKMGVRIADHVLNLKPEDPSTYILLSNVYAVAEMWESVSKVRKLMSSMEVRKEPGYSS 480
           NNM+MGVRIADHVL+LKP+DPSTYILLSNVYA AEMWESVSKVR+LMS MEVRKEPGYSS
Sbjct: 421 NNMEMGVRIADHVLDLKPKDPSTYILLSNVYAGAEMWESVSKVRRLMSCMEVRKEPGYSS 480

Query: 481 IDFGKESQVFHAGETCHPMKDEIFHLLKDLDAEMRRRGYVPNTSFVLHDMEQQEKEKQLF 540
           IDFGKESQVFHAGET HPMKDEIFHLLKDLDAEMRRRGYVPNTSFVLHDMEQQEKEKQLF
Sbjct: 481 IDFGKESQVFHAGETNHPMKDEIFHLLKDLDAEMRRRGYVPNTSFVLHDMEQQEKEKQLF 540

Query: 541 WHSERLAMAYGLLKAVPGTIIRIVKNLRICGDCHNVLKFTSDIVKREIVVRDATRYHHFK 600
           WHSERLAMAYGLLKAVPGT+IRIVKNLRICGDCHNVLKFTSDIVKREIVVRDATRYHHFK
Sbjct: 541 WHSERLAMAYGLLKAVPGTVIRIVKNLRICGDCHNVLKFTSDIVKREIVVRDATRYHHFK 600

Query: 601 EGKCSCNDFW 611
           +GKCSCNDFW
Sbjct: 601 DGKCSCNDFW 610

[Close]

BLAST of Lcy02g002780 vs. NCBI nr
Match: XP_022143265.1 (pentatricopeptide repeat-containing protein At4g14050, mitochondrial [Momordica charantia] >XP_022143266.1 pentatricopeptide repeat-containing protein At4g14050, mitochondrial [Momordica charantia])

HSP 1 Score: 1155.6 bits (2988), Expect = 0.0e+00
Identity = 567/610 (92.95%), Postives = 584/610 (95.74%), Query Frame = 0


Query: 1   MNISHFLHELQLCARRQSVSAAGKLHSQIIKAGFDKSGPLPNTLLDVYGKCGLIPQALQL 60
           MN+SHFLHELQLCARRQS SAAGKLHSQIIK G  + GPLPNTLLDVYGKCGLIPQALQL
Sbjct: 1   MNVSHFLHELQLCARRQSASAAGKLHSQIIKTGLVQYGPLPNTLLDVYGKCGLIPQALQL 60

Query: 61  FDEMPQRDHVSWASILTAHNQAILPRRTLSMLSTMFMLDGLQPDHFVFACIVRACASLGY 120
           FDEMP RDHVSWASILTAHNQAILPRRTLSML+TM  LDGLQPDHF+FA IVRACASLG 
Sbjct: 61  FDEMPHRDHVSWASILTAHNQAILPRRTLSMLNTMLALDGLQPDHFIFASIVRACASLGI 120

Query: 121 LRLGRQVHARFMLSSFCDDEVVKSSLIDMYAKCGQPDDARAVFDSILFKNSVSWTAMISG 180
           LRLG+QVHARFMLSSF DDEVVKSSLIDMYAKC QPDDARAVFDSILFKNSVSWTAMISG
Sbjct: 121 LRLGKQVHARFMLSSFYDDEVVKSSLIDMYAKCRQPDDARAVFDSILFKNSVSWTAMISG 180

Query: 181 YAKSGRKSDAIELFQRAPMKNLFSWTALISGLIQSGNGVYSFSLFNEMRREGIDIVDPLV 240
           YA+SGRKSDAIELF R P++NLFSWTALISGLIQSGNG+YSFSLF+EMRREGIDIVDPLV
Sbjct: 181 YARSGRKSDAIELFHRVPVRNLFSWTALISGLIQSGNGMYSFSLFSEMRREGIDIVDPLV 240

Query: 241 LSSVVGACANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKVIFFRMP 300
           LSSVVGACANLALLELGKQIH LVIALGFESCLFISNALVDMYAKCSDILAAK IF  MP
Sbjct: 241 LSSVVGACANLALLELGKQIHCLVIALGFESCLFISNALVDMYAKCSDILAAKDIFLGMP 300

Query: 301 RKDVISWTSIIVGTAQHGKAEEALTLYDDMVLTGTKPNEVTFVGLLYACSHVGLVNRGRE 360
           RKDVISWTSIIVGTAQHG+AEEAL LYD+MVL G KPNEVTFVGLLYACSH GLVNRGRE
Sbjct: 301 RKDVISWTSIIVGTAQHGQAEEALALYDEMVLAGVKPNEVTFVGLLYACSHAGLVNRGRE 360

Query: 361 LFRSMVIDYRINPSLQHYTCLLDLLSRSGHLDEAENLLNEMPFKPDEPTWASLLSACKRH 420
           LFRSMV DYRINPSLQHYTCLLDLLSRSGHLDEAE+++NEMPFKPDEPTWASLLSACKRH
Sbjct: 361 LFRSMVADYRINPSLQHYTCLLDLLSRSGHLDEAESIINEMPFKPDEPTWASLLSACKRH 420

Query: 421 NNMKMGVRIADHVLNLKPEDPSTYILLSNVYAVAEMWESVSKVRKLMSSMEVRKEPGYSS 480
           N MKMGVRIADHVL+LKPEDPSTYILLSNVYA AEMWESVSKVRKLMSSMEVRKEPGYSS
Sbjct: 421 NXMKMGVRIADHVLDLKPEDPSTYILLSNVYASAEMWESVSKVRKLMSSMEVRKEPGYSS 480

Query: 481 IDFGKESQVFHAGETCHPMKDEIFHLLKDLDAEMRRRGYVPNTSFVLHDMEQQEKEKQLF 540
           IDFGKESQVFHAGETCHPM+DEIFHLLKDLDAEMRRRGYVPNTSFVLHDMEQQEKEKQLF
Sbjct: 481 IDFGKESQVFHAGETCHPMRDEIFHLLKDLDAEMRRRGYVPNTSFVLHDMEQQEKEKQLF 540

Query: 541 WHSERLAMAYGLLKAVPGTIIRIVKNLRICGDCHNVLKFTSDIVKREIVVRDATRYHHFK 600
           WHSERLAMAYGLLKAVPGTIIRIVKNLRICGDCHNVLKF SDIVKREIVVRDATRYHHFK
Sbjct: 541 WHSERLAMAYGLLKAVPGTIIRIVKNLRICGDCHNVLKFASDIVKREIVVRDATRYHHFK 600

Query: 601 EGKCSCNDFW 611
           EGKCSCNDFW
Sbjct: 601 EGKCSCNDFW 610

[Close]

BLAST of Lcy02g002780 vs. TAIR 10
Match: AT4G14050.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 868.2 bits (2242), Expect = 3.8e-252
Identity = 413/612 (67.48%), Postives = 508/612 (83.01%), Query Frame = 0


Query: 1   MNISHFLHELQLCARRQSVSAAGKLHSQIIKAGFDKSGPLPNTLLDVYGKCGLIPQALQL 60
           M I H+LH+LQLCAR ++++ A  LH+ I+K G  +  PL NTL++VYGKCG    ALQ+
Sbjct: 1   MLIPHYLHQLQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQV 60

Query: 61  FDEMPQRDHVSWASILTAHNQAILPRRTLSMLSTMFMLDGLQPDHFVFACIVRACASLGY 120
           FDEMP RDH++WAS+LTA NQA L  +TLS+ S++    GL+PD FVF+ +V+ACA+LG 
Sbjct: 61  FDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGS 120

Query: 121 LRLGRQVHARFMLSSFCDDEVVKSSLIDMYAKCGQPDDARAVFDSILFKNSVSWTAMISG 180
           +  GRQVH  F++S + +DEVVKSSL+DMYAKCG  + A+AVFDSI  KN++SWTAM+SG
Sbjct: 121 IDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSG 180

Query: 181 YAKSGRKSDAIELFQRAPMKNLFSWTALISGLIQSGNGVYSFSLFNEMRREGIDIVDPLV 240
           YAKSGRK +A+ELF+  P+KNL+SWTALISG +QSG G+ +FS+F EMRRE +DI+DPLV
Sbjct: 181 YAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLV 240

Query: 241 LSSVVGACANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKVIFFRMP 300
           LSS+VGACANLA    G+Q+HGLVIALGF+SC+FISNAL+DMYAKCSD++AAK IF RM 
Sbjct: 241 LSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMR 300

Query: 301 RKDVISWTSIIVGTAQHGKAEEALTLYDDMVLTGTKPNEVTFVGLLYACSHVGLVNRGRE 360
            +DV+SWTS+IVG AQHG+AE+AL LYDDMV  G KPNEVTFVGL+YACSHVG V +GRE
Sbjct: 301 HRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRE 360

Query: 361 LFRSMVIDYRINPSLQHYTCLLDLLSRSGHLDEAENLLNEMPFKPDEPTWASLLSACKRH 420
           LF+SM  DY I PSLQHYTCLLDLL RSG LDEAENL++ MPF PDEPTWA+LLSACKR 
Sbjct: 361 LFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQ 420

Query: 421 NNMKMGVRIADH-VLNLKPEDPSTYILLSNVYAVAEMWESVSKVRKLMSSMEVRKEPGYS 480
              +MG+RIADH V + K +DPSTYILLSN+YA A +W  VS+ R+ +  MEVRK+PG+S
Sbjct: 421 GRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHS 480

Query: 481 SIDFGKESQVFHAGETCHPMKDEIFHLLKDLDAEMR-RRGYVPNTSFVLHDMEQQEKEKQ 540
           S++  KE++VF+AGET HP+K++IF LLK L+ EMR R GYVP+TS++LHDM++QEKEK 
Sbjct: 481 SVEVRKETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDEQEKEKL 540

Query: 541 LFWHSERLAMAYGLLKAVPGTIIRIVKNLRICGDCHNVLKFTSDIVKREIVVRDATRYHH 600
           LFWHSER A+AYGLLKAVPGT IRIVKNLR+CGDCH VLK  S+I +REI+VRDATRYHH
Sbjct: 541 LFWHSERSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHH 600

Query: 601 FKEGKCSCNDFW 611
           FK GKCSCNDFW
Sbjct: 601 FKGGKCSCNDFW 612

[Close]

BLAST of Lcy02g002780 vs. TAIR 10
Match: AT1G25360.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 484.6 bits (1246), Expect = 1.2e-136
Identity = 250/624 (40.06%), Postives = 369/624 (59.13%), Query Frame = 0


Query: 24  KLHSQIIKAGFDKSGPLPNTLLDVYGKC----GLIPQALQLFDEMPQRDHVSWASILT-- 83
           + H+  +K+G      + N L+ VY KC     L+  A ++FDE+ ++D  SW +++T  
Sbjct: 170 QFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGY 229

Query: 84  -----------------------AHNQAI-------LPRRTLSMLSTMFMLDGLQPDHFV 143
                                  A+N  I         +  L M+  M +  G++ D F 
Sbjct: 230 VKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRM-VSSGIELDEFT 289

Query: 144 FACIVRACASLGYLRLGRQVHARFMLSSFCDDEVVKSSLIDMYAKCGQPDDARAVFDSIL 203
           +  ++RACA+ G L+LG+QVHA ++L          +SL+ +Y KCG+ D+ARA+F+ + 
Sbjct: 290 YPSVIRACATAGLLQLGKQVHA-YVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMP 349

Query: 204 FKNSVSWTAMISGYAKSGRKSDAIELFQRAPMKNLFSWTALISGLIQSGNGVYSFSLFNE 263
            K+ VSW A++SGY  SG   +A  +F+    KN+ SW  +ISGL ++G G     LF+ 
Sbjct: 350 AKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSC 409

Query: 264 MRREGIDIVDPLVLSSVVGACANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCS 323
           M+REG +  D    S  + +CA L     G+Q H  ++ +GF+S L   NAL+ MYAKC 
Sbjct: 410 MKREGFEPCD-YAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCG 469

Query: 324 DILAAKVIFFRMPRKDVISWTSIIVGTAQHGKAEEALTLYDDMVLTGTKPNEVTFVGLLY 383
            +  A+ +F  MP  D +SW ++I    QHG   EA+ +Y++M+  G +P+ +T + +L 
Sbjct: 470 VVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLT 529

Query: 384 ACSHVGLVNRGRELFRSMVIDYRINPSLQHYTCLLDLLSRSGHLDEAENLLNEMPFKPDE 443
           ACSH GLV++GR+ F SM   YRI P   HY  L+DLL RSG   +AE+++  +PFKP  
Sbjct: 530 ACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTA 589

Query: 444 PTWASLLSACKRHNNMKMGVRIADHVLNLKPEDPSTYILLSNVYAVAEMWESVSKVRKLM 503
             W +LLS C+ H NM++G+  AD +  L PE   TY+LLSN++A    WE V++VRKLM
Sbjct: 590 EIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLM 649

Query: 504 SSMEVRKEPGYSSIDFGKESQVFHAGETCHPMKDEIFHLLKDLDAEMRRRGYVPNTSFVL 563
               V+KE   S I+   +   F   +T HP  + ++  L+DL  EMRR GYVP+TSFVL
Sbjct: 650 RDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVL 709

Query: 564 HDMEQQ-EKEKQLFWHSERLAMAYGLLKAVPGTIIRIVKNLRICGDCHNVLKFTSDIVKR 611
           HD+E    KE  L  HSE++A+A+GL+K  PGT IRI KNLR CGDCHN  +F S +V+R
Sbjct: 710 HDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSWVVQR 769

[Close]

BLAST of Lcy02g002780 vs. TAIR 10
Match: AT4G37170.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 472.6 bits (1215), Expect = 4.7e-133
Identity = 240/638 (37.62%), Postives = 372/638 (58.31%), Query Frame = 0


Query: 4   SHFLHELQLCARRQSVSAAGKLHSQIIKAGFDKSGPLPNTLLDVYGKC------------ 63
           S + + +Q+C++ +++    K+H  I  +GF     + N LL +Y KC            
Sbjct: 86  STYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDE 145

Query: 64  -------------------GLIPQALQLFDEMPQRDHVSWASILTAHNQAILPRRTLSML 123
                              GL+ +A +LFDEM ++D  SW +++T + +   P   L + 
Sbjct: 146 MPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLY 205

Query: 124 STMFMLDGLQPDHFVFACIVRACASLGYLRLGRQVHARFMLSSFCDDEVVKSSLIDMYAK 183
           S M  +   +P+ F  +  V A A++  +R G+++H   + +    DEV+ SSL+DMY K
Sbjct: 206 SLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGK 265

Query: 184 CGQPDDARAVFDSILFKNSVSWTAMISGYAKSGRKSDAIELFQRAPMKNLFSWTALISGL 243
           CG  D+AR +FD I+ K+ VSWT+MI  Y KS R  +   LF              + G 
Sbjct: 266 CGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSE------------LVGS 325

Query: 244 IQSGNGVYSFSLFNEMRREGIDIVDPLVLSSVVGACANLALLELGKQIHGLVIALGFESC 303
            +  N  Y+F                   + V+ ACA+L   ELGKQ+HG +  +GF+  
Sbjct: 326 CERPN-EYTF-------------------AGVLNACADLTTEELGKQVHGYMTRVGFDPY 385

Query: 304 LFISNALVDMYAKCSDILAAKVIFFRMPRKDVISWTSIIVGTAQHGKAEEALTLYDDMVL 363
            F S++LVDMY KC +I +AK +    P+ D++SWTS+I G AQ+G+ +EAL  +D ++ 
Sbjct: 386 SFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLK 445

Query: 364 TGTKPNEVTFVGLLYACSHVGLVNRGRELFRSMVIDYRINPSLQHYTCLLDLLSRSGHLD 423
           +GTKP+ VTFV +L AC+H GLV +G E F S+   +R++ +  HYTCL+DLL+RSG  +
Sbjct: 446 SGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFE 505

Query: 424 EAENLLNEMPFKPDEPTWASLLSACKRHNNMKMGVRIADHVLNLKPEDPSTYILLSNVYA 483
           + +++++EMP KP +  WAS+L  C  + N+ +    A  +  ++PE+P TY+ ++N+YA
Sbjct: 506 QLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYA 565

Query: 484 VAEMWESVSKVRKLMSSMEVRKEPGYSSIDFGKESQVFHAGETCHPMKDEIFHLLKDLDA 543
            A  WE   K+RK M  + V K PG S  +  ++  VF A +T HPM ++I   L++L  
Sbjct: 566 AAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRK 625

Query: 544 EMRRRGYVPNTSFVLHDMEQQEKEKQLFWHSERLAMAYGLLKAVPGTIIRIVKNLRICGD 603
           +M+  GYVP TS VLHD+E ++KE+ L +HSE+LA+A+ +L    GT I++ KNLR C D
Sbjct: 626 KMKEEGYVPATSLVLHDVEDEQKEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVD 685

Query: 604 CHNVLKFTSDIVKREIVVRDATRYHHFKEGKCSCNDFW 611
           CH  +KF S+I KR+I VRD+TR+H F+ G+CSC D+W
Sbjct: 686 CHGAIKFISNITKRKITVRDSTRFHCFENGQCSCGDYW 691

[Close]

BLAST of Lcy02g002780 vs. TAIR 10
Match: AT2G22070.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 458.4 bits (1178), Expect = 9.2e-129
Identity = 238/631 (37.72%), Postives = 370/631 (58.64%), Query Frame = 0


Query: 14  ARRQSVSAAGKLHSQIIKAGFDKSGPLPNTLLDVYGKC---------------------- 73
           A  + +    K+HS I+K G   +  + N+LL++Y KC                      
Sbjct: 157 AATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWN 216

Query: 74  ---------GLIPQALQLFDEMPQRDHVSWASILTAHNQAILPRRTLSMLSTMFMLDGLQ 133
                    G +  A+  F++M +RD V+W S+++  NQ     R L + S M     L 
Sbjct: 217 AMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLS 276

Query: 134 PDHFVFACIVRACASLGYLRLGRQVHARFMLSSFCDDEVVKSSLIDMYAKCGQPDDARAV 193
           PD F  A ++ ACA+L  L +G+Q+H+  + + F    +V ++LI MY++CG  + AR +
Sbjct: 277 PDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRL 336

Query: 194 FDSILFKN--SVSWTAMISGYAKSGRKSDAIELFQRAPMKNLFSWTALISGLIQSGNGVY 253
            +    K+     +TA++ GY K G  + A  +F     +++ +WTA+I G  Q G+   
Sbjct: 337 IEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGE 396

Query: 254 SFSLFNEMRREGIDIVDPLVLSSVVGACANLALLELGKQIHGLVIALGFESCLFISNALV 313
           + +LF  M   G    +   L++++   ++LA L  GKQIHG  +  G    + +SNAL+
Sbjct: 397 AINLFRSMVGGG-QRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALI 456

Query: 314 DMYAKCSDILAAKVIFFRMP-RKDVISWTSIIVGTAQHGKAEEALTLYDDMVLTGTKPNE 373
            MYAK  +I +A   F  +   +D +SWTS+I+  AQHG AEEAL L++ M++ G +P+ 
Sbjct: 457 TMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDH 516

Query: 374 VTFVGLLYACSHVGLVNRGRELFRSMVIDYRINPSLQHYTCLLDLLSRSGHLDEAENLLN 433
           +T+VG+  AC+H GLVN+GR+ F  M    +I P+L HY C++DL  R+G L EA+  + 
Sbjct: 517 ITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIE 576

Query: 434 EMPFKPDEPTWASLLSACKRHNNMKMGVRIADHVLNLKPEDPSTYILLSNVYAVAEMWES 493
           +MP +PD  TW SLLSAC+ H N+ +G   A+ +L L+PE+   Y  L+N+Y+    WE 
Sbjct: 577 KMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEE 636

Query: 494 VSKVRKLMSSMEVRKEPGYSSIDFGKESQVFHAGETCHPMKDEIFHLLKDLDAEMRRRGY 553
            +K+RK M    V+KE G+S I+   +  VF   +  HP K+EI+  +K +  E+++ GY
Sbjct: 637 AAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGY 696

Query: 554 VPNTSFVLHDMEQQEKEKQLFWHSERLAMAYGLLKAVPGTIIRIVKNLRICGDCHNVLKF 611
           VP+T+ VLHD+E++ KE+ L  HSE+LA+A+GL+     T +RI+KNLR+C DCH  +KF
Sbjct: 697 VPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKF 756

[Close]

BLAST of Lcy02g002780 vs. TAIR 10
Match: AT4G02750.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 453.8 bits (1166), Expect = 2.3e-127
Identity = 229/570 (40.18%), Postives = 348/570 (61.05%), Query Frame = 0


Query: 42  NTLLDVYGKCGLIPQALQLFDEMPQRDHVSWASILTAHNQAILPRRTLSMLSTMFMLDGL 101
           N LL  + K   I +A Q FD M  RD VSW +I+T + Q+      +     +F    +
Sbjct: 223 NCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQS----GKIDEARQLFDESPV 282

Query: 102 QPDHFVFACIVRACASLGYLRLGRQVHARFMLSSFCD-DEVVKSSLIDMYAKCGQPDDAR 161
           Q D F +  +V      GY++      AR +     + +EV  ++++  Y +  + + A+
Sbjct: 283 Q-DVFTWTAMVS-----GYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAK 342

Query: 162 AVFDSILFKNSVSWTAMISGYAKSGRKSDAIELFQRAPMKNLFSWTALISGLIQSGNGVY 221
            +FD +  +N  +W  MI+GYA+ G+ S+A  LF + P ++  SW A+I+G  QSG+   
Sbjct: 343 ELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFE 402

Query: 222 SFSLFNEMRREGIDIVDPLVLSSVVGACANLALLELGKQIHGLVIALGFESCLFISNALV 281
           +  LF +M REG   ++    SS +  CA++  LELGKQ+HG ++  G+E+  F+ NAL+
Sbjct: 403 ALRLFVQMEREG-GRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALL 462

Query: 282 DMYAKCSDILAAKVIFFRMPRKDVISWTSIIVGTAQHGKAEEALTLYDDMVLTGTKPNEV 341
            MY KC  I  A  +F  M  KD++SW ++I G ++HG  E AL  ++ M   G KP++ 
Sbjct: 463 LMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDA 522

Query: 342 TFVGLLYACSHVGLVNRGRELFRSMVIDYRINPSLQHYTCLLDLLSRSGHLDEAENLLNE 401
           T V +L ACSH GLV++GR+ F +M  DY + P+ QHY C++DLL R+G L++A NL+  
Sbjct: 523 TMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKN 582

Query: 402 MPFKPDEPTWASLLSACKRHNNMKMGVRIADHVLNLKPEDPSTYILLSNVYAVAEMWESV 461
           MPF+PD   W +LL A + H N ++    AD +  ++PE+   Y+LLSN+YA +  W  V
Sbjct: 583 MPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDV 642

Query: 462 SKVRKLMSSMEVRKEPGYSSIDFGKESQVFHAGETCHPMKDEIFHLLKDLDAEMRRRGYV 521
            K+R  M    V+K PGYS I+   ++  F  G+  HP KDEIF  L++LD  M++ GYV
Sbjct: 643 GKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYV 702

Query: 522 PNTSFVLHDMEQQEKEKQLFWHSERLAMAYGLLKAVPGTIIRIVKNLRICGDCHNVLKFT 581
             TS VLHD+E++EKE+ + +HSERLA+AYG+++   G  IR++KNLR+C DCHN +K+ 
Sbjct: 703 SKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYM 762

Query: 582 SDIVKREIVVRDATRYHHFKEGKCSCNDFW 611
           + I  R I++RD  R+HHFK+G CSC D+W
Sbjct: 763 ARITGRLIILRDNNRFHHFKDGSCSCGDYW 781

The following BLAST results are available for this feature:

BLAST of Lcy02g002780 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23266	5.4e-251	67.48	Pentatricopeptide repeat-containing protein At4g14050, mitochondrial OS=Arabidop...	[more]
Q9FRI5	1.7e-135	40.06	Pentatricopeptide repeat-containing protein At1g25360 OS=Arabidopsis thaliana OX...	[more]
O23169	6.6e-132	37.62	Pentatricopeptide repeat-containing protein At4g37170 OS=Arabidopsis thaliana OX...	[more]
Q9SHZ8	1.3e-127	37.72	Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX...	[more]
Q9SY02	3.2e-126	40.18	Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX...	[more]

BLAST of Lcy02g002780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KBS5	0.0e+00	92.62	pentatricopeptide repeat-containing protein At4g14050, mitochondrial OS=Cucurbit...	[more]
A0A6J1G9N5	0.0e+00	92.46	pentatricopeptide repeat-containing protein At4g14050, mitochondrial OS=Cucurbit...	[more]
A0A6J1CPR6	0.0e+00	92.95	pentatricopeptide repeat-containing protein At4g14050, mitochondrial OS=Momordic...	[more]
A0A1S3BZM7	0.0e+00	89.85	LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At4g14050, mito...	[more]
A0A5D3E178	0.0e+00	89.85	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]

BLAST of Lcy02g002780 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038903469.1	0.0e+00	94.10	pentatricopeptide repeat-containing protein At4g14050, mitochondrial [Benincasa ...	[more]
XP_023523455.1	0.0e+00	92.46	pentatricopeptide repeat-containing protein At4g14050, mitochondrial [Cucurbita ...	[more]
XP_022998145.1	0.0e+00	92.62	pentatricopeptide repeat-containing protein At4g14050, mitochondrial [Cucurbita ...	[more]
XP_022948359.1	0.0e+00	92.46	pentatricopeptide repeat-containing protein At4g14050, mitochondrial [Cucurbita ...	[more]
XP_022143265.1	0.0e+00	92.95	pentatricopeptide repeat-containing protein At4g14050, mitochondrial [Momordica ...	[more]

BLAST of Lcy02g002780 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G14050.1	3.8e-252	67.48	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G25360.1	1.2e-136	40.06	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT4G37170.1	4.7e-133	37.62	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT2G22070.1	9.2e-129	37.72	pentatricopeptide (PPR) repeat-containing protein	[more]
AT4G02750.1	2.3e-127	40.18	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 302..349 e-value: 1.3E-9 score: 38.1
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 203..233 e-value: 7.2E-6 score: 25.9 coord: 172..196 e-value: 5.2E-6 score: 26.3 coord: 378..401 e-value: 3.7E-4 score: 20.5 coord: 42..67 e-value: 1.1E-4 score: 22.1 coord: 144..166 e-value: 0.0046 score: 17.1
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 305..339 e-value: 5.6E-5 score: 21.0 coord: 203..233 e-value: 1.5E-4 score: 19.7 coord: 42..70 e-value: 5.4E-4 score: 17.9 coord: 172..196 e-value: 2.5E-4 score: 19.0 coord: 378..402 e-value: 0.001 score: 17.1
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 303..337 score: 10.873667
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 170..204 score: 10.347525
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 374..408 score: 9.404853
IPR032867	DYW domain	PFAM	PF14432	DYW_deaminase	coord: 477..600 e-value: 9.4E-36 score: 122.5
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 1..96 e-value: 5.7E-9 score: 37.8
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 97..255 e-value: 1.2E-22 score: 82.2 coord: 263..354 e-value: 4.1E-19 score: 70.6
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 355..547 e-value: 1.8E-18 score: 69.1
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 149..459
None	No IPR available	PANTHER	PTHR47928	REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED	coord: 5..598
None	No IPR available	PANTHER	PTHR47928:SF153	OS11G0661000 PROTEIN	coord: 5..598

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy02g002780.1	Lcy02g002780.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016554	cytidine to uridine editing
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding