Lcy02g002710 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy02g002710
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Protein RALF-like 33
Location	Chr02: 3749311 .. 3749897 (-)
RNA-Seq Expression	Lcy02g002710
Synteny	Lcy02g002710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCATGGGAAACTCTTCTTCTCCACCTGCCTTCCTTATGCTCATTTTCACCATAGCCTTCTTCGTCTCTTCTTCGTCCTCTTTAACAGTCACGGCCATGAGTGGTGACCGTAGTCTTAGCTGGCTCTCGACCGAAGCTCGATGCCATGGACGTTCGATAAGCGAATGCATGATGAACGTTGAGTTTGACATGGACTCTGAGATCAATCGTCGCATCTTAGCCACTTCAAGTTACATAAGTTACAAGTCGTTGAAGGCGAACAACATTCCATGCTCTCGGAGAGGTTCTTCCTACTACAATTGTCGACCCGGGGCCGAAGCTAACCCGTATCAGCGAGGTTGCACCGCCATTACTCGTTGCAGAAGCTAAGAAAAACAACTCAGCTTCTTGTTTGCTTTTATGTCTTTCCTTCTTGTTCTTGTCTTTGTAACATAGAATAAATTTGAGAAAGGCAGTATTGCCATGTTTGGATGTATTATAGAATGTTTGGTTTTGCACTTTCATTGTCACCAAAGAAAAAAAAAGTATTTAGACTTTAATGTTACAAATATATAATAATTCTCAGAAAGAAATAGCGATATATGTTTT

mRNA sequence

CCATGGGAAACTCTTCTTCTCCACCTGCCTTCCTTATGCTCATTTTCACCATAGCCTTCTTCGTCTCTTCTTCGTCCTCTTTAACAGTCACGGCCATGAGTGGTGACCGTAGTCTTAGCTGGCTCTCGACCGAAGCTCGATGCCATGGACGTTCGATAAGCGAATGCATGATGAACGTTGAGTTTGACATGGACTCTGAGATCAATCGTCGCATCTTAGCCACTTCAAGTTACATAAGTTACAAGTCGTTGAAGGCGAACAACATTCCATGCTCTCGGAGAGGTTCTTCCTACTACAATTGTCGACCCGGGGCCGAAGCTAACCCGTATCAGCGAGGTTGCACCGCCATTACTCGTTGCAGAAGCTAAGAAAAACAACTCAGCTTCTTGTTTGCTTTTATGTCTTTCCTTCTTGTTCTTGTCTTTGTAACATAGAATAAATTTGAGAAAGGCAGTATTGCCATGTTTGGATGTATTATAGAATGTTTGGTTTTGCACTTTCATTGTCACCAAAGAAAAAAAAAGTATTTAGACTTTAATGTTACAAATATATAATAATTCTCAGAAAGAAATAGCGATATATGTTTT

Coding sequence (CDS)

ATGGGAAACTCTTCTTCTCCACCTGCCTTCCTTATGCTCATTTTCACCATAGCCTTCTTCGTCTCTTCTTCGTCCTCTTTAACAGTCACGGCCATGAGTGGTGACCGTAGTCTTAGCTGGCTCTCGACCGAAGCTCGATGCCATGGACGTTCGATAAGCGAATGCATGATGAACGTTGAGTTTGACATGGACTCTGAGATCAATCGTCGCATCTTAGCCACTTCAAGTTACATAAGTTACAAGTCGTTGAAGGCGAACAACATTCCATGCTCTCGGAGAGGTTCTTCCTACTACAATTGTCGACCCGGGGCCGAAGCTAACCCGTATCAGCGAGGTTGCACCGCCATTACTCGTTGCAGAAGCTAA

Protein sequence

MGNSSSPPAFLMLIFTIAFFVSSSSSLTVTAMSGDRSLSWLSTEARCHGRSISECMMNVEFDMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCRPGAEANPYQRGCTAITRCRS

Homology

[Close]

BLAST of Lcy02g002710 vs. ExPASy Swiss-Prot
Match: Q8L9P8 (Protein RALF-like 33 OS=Arabidopsis thaliana OX=3702 GN=RALFL33 PE=2 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 6.3e-26
Identity = 64/122 (52.46%), Postives = 89/122 (72.95%), Query Frame = 0


Query: 2   GNSSSPPAFLMLIFTIAFFVSSSSSLTVTAMSGDRSLSWLSTEARCHGRSISECMMNV-- 61
           G S+ P A ++ I T+ F  ++ +S +    SGD    ++  E++C+G +I+EC ++   
Sbjct: 3   GLSTKPVAIIIAILTVHFLFAAVTSQS----SGD----FVPIESKCNG-TIAECSLSTAE 62

Query: 62  -EFDMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCRPGAEANPYQRGCTAITR 121
            EF+MDSEINRRILAT+ YISY +L+ N +PCSRRG+SYYNCR GA+ANPY RGC+AITR
Sbjct: 63  EEFEMDSEINRRILATTKYISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAITR 115

[Close]

BLAST of Lcy02g002710 vs. ExPASy Swiss-Prot
Match: Q9SRY3 (Protein RALF-like 1 OS=Arabidopsis thaliana OX=3702 GN=RALF1 PE=1 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 7.7e-24
Identity = 62/116 (53.45%), Postives = 80/116 (68.97%), Query Frame = 0


Query: 10  FLMLIFTIAFFVSSSSSLTVTAMSGD-RSLSWLST---EARCHGRSISECMMNVEFDMDS 69
           FL L   + F +SS         + D   ++W +T    + CHG SI+EC+   E +MDS
Sbjct: 8   FLTLTILVVFIISSPP--VQAGFANDLGGVAWATTGDNGSGCHG-SIAECIGAEEEEMDS 67

Query: 70  EINRRILATSSYISYKSLKANNIPCSRRGSSYYNCRPGAEANPYQRGCTAITRCRS 122
           EINRRILAT+ YISY+SLK N++PCSRRG+SYYNC+ GA+ANPY RGC+ I RCRS
Sbjct: 68  EINRRILATTKYISYQSLKRNSVPCSRRGASYYNCQNGAQANPYSRGCSKIARCRS 120

[Close]

BLAST of Lcy02g002710 vs. ExPASy Swiss-Prot
Match: Q945T0 (Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 3.8e-23
Identity = 59/119 (49.58%), Postives = 78/119 (65.55%), Query Frame = 0


Query: 7   PPAFLMLIFTIAFFVSSSSSLTVTAMSGDRSLSWL---STEARCHGRSISECMM-NVEFD 66
           P   ++ +   AFF+S      + A     +  W+    +   C G SI EC+    EF+
Sbjct: 4   PSGLILCVLIGAFFIS------MAAAGDSGAYDWVMPARSGGGCKG-SIGECIAEEEEFE 63

Query: 67  MDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCRPGAEANPYQRGCTAITRCRS 122
           +DSE NRRILAT  YISY +L+ N++PCSRRG+SYYNC+PGA+ANPY RGC+AITRCRS
Sbjct: 64  LDSESNRRILATKKYISYGALQKNSVPCSRRGASYYNCKPGAQANPYSRGCSAITRCRS 115

[Close]

BLAST of Lcy02g002710 vs. ExPASy Swiss-Prot
Match: Q9LUS7 (Rapid alkalinization factor 23 OS=Arabidopsis thaliana OX=3702 GN=RALF23 PE=1 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.2e-21
Identity = 64/135 (47.41%), Postives = 78/135 (57.78%), Query Frame = 0


Query: 3   NSSSPPAFLMLIFTIAFFVSSSSSLTVTAMSGDRSLSWLSTEARCHGRSISECM------ 62
           NS +   F +L+       S + S   T  +GD    +   E  C G +I+EC       
Sbjct: 7   NSGAAAIFAILLILAVHNWSVAVSSQSTEFAGD----FPPFETECRG-TIAECSVSAALG 66

Query: 63  -----------MNVEFDMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCRPGAE 121
                      M  EF+MDSEINRRILAT  YISY +L+ N IPCSRRG+SYYNCR GA+
Sbjct: 67  DGGDLFYGGGEMGEEFEMDSEINRRILATRRYISYGALRRNTIPCSRRGASYYNCRRGAQ 126

[Close]

BLAST of Lcy02g002710 vs. ExPASy Swiss-Prot
Match: Q9MA62 (Protein RALF-like 22 OS=Arabidopsis thaliana OX=3702 GN=RALFL22 PE=3 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 3.3e-19
Identity = 45/75 (60.00%), Postives = 59/75 (78.67%), Query Frame = 0


Query: 47  CHGRSISECMM-NVEFDMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCRPGAE 106
           C G SI+EC+    E + DS+I+RRILA   YISY +++ N++PCSRRG+SYYNC+ GA+
Sbjct: 45  CTG-SIAECIAEEEEMEFDSDISRRILAQKKYISYGAMRRNSVPCSRRGASYYNCQRGAQ 104

Query: 107 ANPYQRGCTAITRCR 121
           ANPY RGC+ ITRCR
Sbjct: 105 ANPYSRGCSTITRCR 118

[Close]

BLAST of Lcy02g002710 vs. ExPASy TrEMBL
Match: A0A6J1F244 (protein RALF-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111441696 PE=3 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 1.1e-52
Identity = 112/122 (91.80%), Postives = 116/122 (95.08%), Query Frame = 0


Query: 1   MGNSSSPPAFL-MLIFTIAFFVSSSSSLTVTAMSGDRSLSWLSTEARCHGRSISECMMNV 60
           MGNSSSPPAF  MLIFTIAFFV SSSSL V AMSGDRSLSWLSTEARCHGRS+SECMM+V
Sbjct: 1   MGNSSSPPAFFSMLIFTIAFFV-SSSSLMVVAMSGDRSLSWLSTEARCHGRSLSECMMDV 60

Query: 61  EFDMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCRPGAEANPYQRGCTAITRC 120
           EF+MDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNC+PGAEANPYQRGCT ITRC
Sbjct: 61  EFEMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCTVITRC 120

Query: 121 RS 122
           RS
Sbjct: 121 RS 121

[Close]

BLAST of Lcy02g002710 vs. ExPASy TrEMBL
Match: A0A6J1J798 (protein RALF-like 1 OS=Cucurbita maxima OX=3661 GN=LOC111482012 PE=3 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 1.8e-52
Identity = 112/122 (91.80%), Postives = 115/122 (94.26%), Query Frame = 0


Query: 1   MGNSSSPPAFL-MLIFTIAFFVSSSSSLTVTAMSGDRSLSWLSTEARCHGRSISECMMNV 60
           MGNSSSPPAF  MLIFTIAFFV SSSSL V AMSGDRSLSWLSTEARCHGR +SECMMNV
Sbjct: 1   MGNSSSPPAFFSMLIFTIAFFV-SSSSLMVMAMSGDRSLSWLSTEARCHGRLLSECMMNV 60

Query: 61  EFDMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCRPGAEANPYQRGCTAITRC 120
           EF+MDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNC+PGAEANPYQRGCT ITRC
Sbjct: 61  EFEMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCTVITRC 120

Query: 121 RS 122
           RS
Sbjct: 121 RS 121

[Close]

BLAST of Lcy02g002710 vs. ExPASy TrEMBL
Match: A0A5A7TQI0 (Protein RALF-like 33 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G00930 PE=3 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 6.9e-52
Identity = 108/121 (89.26%), Postives = 114/121 (94.21%), Query Frame = 0


Query: 1   MGNSSSPPAFLMLIFTIAFFVSSSSSLTVTAMSGDRSLSWLSTEARCHGRSISECMMNVE 60
           MGNSSSPPAF +LIFTIA FV SSSSL VTAMS D+SL+WLSTE RCHGRSISECMM +E
Sbjct: 1   MGNSSSPPAFTILIFTIAVFV-SSSSLAVTAMSSDQSLNWLSTEVRCHGRSISECMMKIE 60

Query: 61  FDMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCRPGAEANPYQRGCTAITRCR 120
           F+MDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNC+PGAEANPYQRGCTAITRCR
Sbjct: 61  FEMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCTAITRCR 120

Query: 121 S 122
           S
Sbjct: 121 S 120

[Close]

BLAST of Lcy02g002710 vs. ExPASy TrEMBL
Match: A0A0A0KWI2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G001640 PE=3 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 6.9e-52
Identity = 108/122 (88.52%), Postives = 116/122 (95.08%), Query Frame = 0


Query: 1   MGNSSSPPAFLMLIFTIAFFV-SSSSSLTVTAMSGDRSLSWLSTEARCHGRSISECMMNV 60
           MG+SSSPPA  +LIFTIAFFV SSSSSL VT MS DRSL+WLSTEARCHGRSISECMM++
Sbjct: 1   MGSSSSPPALSILIFTIAFFVSSSSSSLVVTTMSSDRSLNWLSTEARCHGRSISECMMHI 60

Query: 61  EFDMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCRPGAEANPYQRGCTAITRC 120
           EF+MDSEINRRILATSSYISYKSL+ANNIPCSRRGSSYYNC+PGAEANPYQRGCTAITRC
Sbjct: 61  EFEMDSEINRRILATSSYISYKSLRANNIPCSRRGSSYYNCQPGAEANPYQRGCTAITRC 120

Query: 121 RS 122
           RS
Sbjct: 121 RS 122

[Close]

BLAST of Lcy02g002710 vs. ExPASy TrEMBL
Match: A0A6J5XM33 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS34632 PE=3 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 1.7e-29
Identity = 74/121 (61.16%), Postives = 88/121 (72.73%), Query Frame = 0


Query: 1   MGNSSSPPAFLMLIFTIAFFVSSSSSLTVTAMSGDRSLSWLSTEARCHGRSISECMMNVE 60
           M NSSS   F   +FT    +   S+ TV A  GD  LSW+ +  RC G SI+ECM + E
Sbjct: 1   MANSSSIFLFAFYMFTATLII---STWTVHA-GGDHGLSWVPSRTRCQG-SIAECMADDE 60

Query: 61  FDMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCRPGAEANPYQRGCTAITRCR 120
           FDMDSEINRRILATS YISY +L+ N +PCSRRG+SYYNC+PGAE+NPY RGC+AI RCR
Sbjct: 61  FDMDSEINRRILATSQYISYGALQRNTVPCSRRGASYYNCKPGAESNPYNRGCSAIARCR 116

Query: 121 S 122
           S
Sbjct: 121 S 116

[Close]

BLAST of Lcy02g002710 vs. NCBI nr
Match: XP_022934551.1 (protein RALF-like 1 [Cucurbita moschata])

HSP 1 Score: 215.7 bits (548), Expect = 2.2e-52
Identity = 112/122 (91.80%), Postives = 116/122 (95.08%), Query Frame = 0


Query: 1   MGNSSSPPAFL-MLIFTIAFFVSSSSSLTVTAMSGDRSLSWLSTEARCHGRSISECMMNV 60
           MGNSSSPPAF  MLIFTIAFFV SSSSL V AMSGDRSLSWLSTEARCHGRS+SECMM+V
Sbjct: 1   MGNSSSPPAFFSMLIFTIAFFV-SSSSLMVVAMSGDRSLSWLSTEARCHGRSLSECMMDV 60

Query: 61  EFDMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCRPGAEANPYQRGCTAITRC 120
           EF+MDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNC+PGAEANPYQRGCT ITRC
Sbjct: 61  EFEMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCTVITRC 120

Query: 121 RS 122
           RS
Sbjct: 121 RS 121

[Close]

BLAST of Lcy02g002710 vs. NCBI nr
Match: XP_022983404.1 (protein RALF-like 1 [Cucurbita maxima])

HSP 1 Score: 214.9 bits (546), Expect = 3.8e-52
Identity = 112/122 (91.80%), Postives = 115/122 (94.26%), Query Frame = 0


Query: 1   MGNSSSPPAFL-MLIFTIAFFVSSSSSLTVTAMSGDRSLSWLSTEARCHGRSISECMMNV 60
           MGNSSSPPAF  MLIFTIAFFV SSSSL V AMSGDRSLSWLSTEARCHGR +SECMMNV
Sbjct: 1   MGNSSSPPAFFSMLIFTIAFFV-SSSSLMVMAMSGDRSLSWLSTEARCHGRLLSECMMNV 60

Query: 61  EFDMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCRPGAEANPYQRGCTAITRC 120
           EF+MDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNC+PGAEANPYQRGCT ITRC
Sbjct: 61  EFEMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCTVITRC 120

Query: 121 RS 122
           RS
Sbjct: 121 RS 121

[Close]

BLAST of Lcy02g002710 vs. NCBI nr
Match: KGN52797.1 (hypothetical protein Csa_014956 [Cucumis sativus])

HSP 1 Score: 213.0 bits (541), Expect = 1.4e-51
Identity = 108/122 (88.52%), Postives = 116/122 (95.08%), Query Frame = 0


Query: 1   MGNSSSPPAFLMLIFTIAFFV-SSSSSLTVTAMSGDRSLSWLSTEARCHGRSISECMMNV 60
           MG+SSSPPA  +LIFTIAFFV SSSSSL VT MS DRSL+WLSTEARCHGRSISECMM++
Sbjct: 1   MGSSSSPPALSILIFTIAFFVSSSSSSLVVTTMSSDRSLNWLSTEARCHGRSISECMMHI 60

Query: 61  EFDMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCRPGAEANPYQRGCTAITRC 120
           EF+MDSEINRRILATSSYISYKSL+ANNIPCSRRGSSYYNC+PGAEANPYQRGCTAITRC
Sbjct: 61  EFEMDSEINRRILATSSYISYKSLRANNIPCSRRGSSYYNCQPGAEANPYQRGCTAITRC 120

Query: 121 RS 122
           RS
Sbjct: 121 RS 122

[Close]

BLAST of Lcy02g002710 vs. NCBI nr
Match: XP_023529110.1 (protein RALF-like 33 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 213.0 bits (541), Expect = 1.4e-51
Identity = 111/122 (90.98%), Postives = 114/122 (93.44%), Query Frame = 0


Query: 1   MGNSSSPPAFL-MLIFTIAFFVSSSSSLTVTAMSGDRSLSWLSTEARCHGRSISECMMNV 60
           MGNSSSPPAF  MLIFTIAFFV  SSSL V AMSGD SLSWLSTEARCHGRS+SECMMNV
Sbjct: 1   MGNSSSPPAFFSMLIFTIAFFV-YSSSLMVMAMSGDHSLSWLSTEARCHGRSLSECMMNV 60

Query: 61  EFDMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCRPGAEANPYQRGCTAITRC 120
           EF+MDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNC+PGAEANPYQRGCT ITRC
Sbjct: 61  EFEMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCTVITRC 120

Query: 121 RS 122
           RS
Sbjct: 121 RS 121

[Close]

BLAST of Lcy02g002710 vs. NCBI nr
Match: KAA0044366.1 (protein RALF-like 33 [Cucumis melo var. makuwa])

HSP 1 Score: 213.0 bits (541), Expect = 1.4e-51
Identity = 108/121 (89.26%), Postives = 114/121 (94.21%), Query Frame = 0


Query: 1   MGNSSSPPAFLMLIFTIAFFVSSSSSLTVTAMSGDRSLSWLSTEARCHGRSISECMMNVE 60
           MGNSSSPPAF +LIFTIA FV SSSSL VTAMS D+SL+WLSTE RCHGRSISECMM +E
Sbjct: 1   MGNSSSPPAFTILIFTIAVFV-SSSSLAVTAMSSDQSLNWLSTEVRCHGRSISECMMKIE 60

Query: 61  FDMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCRPGAEANPYQRGCTAITRCR 120
           F+MDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNC+PGAEANPYQRGCTAITRCR
Sbjct: 61  FEMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCTAITRCR 120

Query: 121 S 122
           S
Sbjct: 121 S 120

[Close]

BLAST of Lcy02g002710 vs. TAIR 10
Match: AT4G15800.1 (ralf-like 33 )

HSP 1 Score: 118.2 bits (295), Expect = 4.5e-27
Identity = 64/122 (52.46%), Postives = 89/122 (72.95%), Query Frame = 0


Query: 2   GNSSSPPAFLMLIFTIAFFVSSSSSLTVTAMSGDRSLSWLSTEARCHGRSISECMMNV-- 61
           G S+ P A ++ I T+ F  ++ +S +    SGD    ++  E++C+G +I+EC ++   
Sbjct: 3   GLSTKPVAIIIAILTVHFLFAAVTSQS----SGD----FVPIESKCNG-TIAECSLSTAE 62

Query: 62  -EFDMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCRPGAEANPYQRGCTAITR 121
            EF+MDSEINRRILAT+ YISY +L+ N +PCSRRG+SYYNCR GA+ANPY RGC+AITR
Sbjct: 63  EEFEMDSEINRRILATTKYISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAITR 115

[Close]

BLAST of Lcy02g002710 vs. TAIR 10
Match: AT1G02900.1 (rapid alkalinization factor 1 )

HSP 1 Score: 111.3 bits (277), Expect = 5.5e-25
Identity = 62/116 (53.45%), Postives = 80/116 (68.97%), Query Frame = 0


Query: 10  FLMLIFTIAFFVSSSSSLTVTAMSGD-RSLSWLST---EARCHGRSISECMMNVEFDMDS 69
           FL L   + F +SS         + D   ++W +T    + CHG SI+EC+   E +MDS
Sbjct: 8   FLTLTILVVFIISSPP--VQAGFANDLGGVAWATTGDNGSGCHG-SIAECIGAEEEEMDS 67

Query: 70  EINRRILATSSYISYKSLKANNIPCSRRGSSYYNCRPGAEANPYQRGCTAITRCRS 122
           EINRRILAT+ YISY+SLK N++PCSRRG+SYYNC+ GA+ANPY RGC+ I RCRS
Sbjct: 68  EINRRILATTKYISYQSLKRNSVPCSRRGASYYNCQNGAQANPYSRGCSKIARCRS 120

[Close]

BLAST of Lcy02g002710 vs. TAIR 10
Match: AT3G16570.1 (rapid alkalinization factor 23 )

HSP 1 Score: 104.0 bits (258), Expect = 8.7e-23
Identity = 64/135 (47.41%), Postives = 78/135 (57.78%), Query Frame = 0


Query: 3   NSSSPPAFLMLIFTIAFFVSSSSSLTVTAMSGDRSLSWLSTEARCHGRSISECM------ 62
           NS +   F +L+       S + S   T  +GD    +   E  C G +I+EC       
Sbjct: 7   NSGAAAIFAILLILAVHNWSVAVSSQSTEFAGD----FPPFETECRG-TIAECSVSAALG 66

Query: 63  -----------MNVEFDMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCRPGAE 121
                      M  EF+MDSEINRRILAT  YISY +L+ N IPCSRRG+SYYNCR GA+
Sbjct: 67  DGGDLFYGGGEMGEEFEMDSEINRRILATRRYISYGALRRNTIPCSRRGASYYNCRRGAQ 126

[Close]

BLAST of Lcy02g002710 vs. TAIR 10
Match: AT3G05490.1 (ralf-like 22 )

HSP 1 Score: 95.9 bits (237), Expect = 2.4e-20
Identity = 45/75 (60.00%), Postives = 59/75 (78.67%), Query Frame = 0


Query: 47  CHGRSISECMM-NVEFDMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCRPGAE 106
           C G SI+EC+    E + DS+I+RRILA   YISY +++ N++PCSRRG+SYYNC+ GA+
Sbjct: 45  CTG-SIAECIAEEEEMEFDSDISRRILAQKKYISYGAMRRNSVPCSRRGASYYNCQRGAQ 104

Query: 107 ANPYQRGCTAITRCR 121
           ANPY RGC+ ITRCR
Sbjct: 105 ANPYSRGCSTITRCR 118

[Close]

BLAST of Lcy02g002710 vs. TAIR 10
Match: AT2G33775.1 (ralf-like 19 )

HSP 1 Score: 82.8 bits (203), Expect = 2.1e-16
Identity = 42/94 (44.68%), Postives = 61/94 (64.89%), Query Frame = 0


Query: 27  LTVTAMSGDRSLSWLSTEARCHGRSISECMMNVEFDMDSEINRRILAT-SSYISYKSLKA 86
           LT+  ++   + +W  T++  +G+        +++ MDSE NRR LA   SYISY +L+ 
Sbjct: 12  LTLAVVAESANATWTLTKSCVNGQGCIGEDGELDYLMDSETNRRQLAARRSYISYGALRK 71

Query: 87  NNIPCSRRGSSYYNCRPGAEANPYQRGCTAITRC 120
           NN+PCSRRG SYY+C+    ANPY+RGC+ IT C
Sbjct: 72  NNVPCSRRGRSYYDCKKRKRANPYRRGCSVITHC 105

The following BLAST results are available for this feature:

BLAST of Lcy02g002710 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L9P8	6.3e-26	52.46	Protein RALF-like 33 OS=Arabidopsis thaliana OX=3702 GN=RALFL33 PE=2 SV=1	[more]
Q9SRY3	7.7e-24	53.45	Protein RALF-like 1 OS=Arabidopsis thaliana OX=3702 GN=RALF1 PE=1 SV=1	[more]
Q945T0	3.8e-23	49.58	Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1	[more]
Q9LUS7	1.2e-21	47.41	Rapid alkalinization factor 23 OS=Arabidopsis thaliana OX=3702 GN=RALF23 PE=1 SV...	[more]
Q9MA62	3.3e-19	60.00	Protein RALF-like 22 OS=Arabidopsis thaliana OX=3702 GN=RALFL22 PE=3 SV=1	[more]

BLAST of Lcy02g002710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F244	1.1e-52	91.80	protein RALF-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111441696 PE=3 SV=1	[more]
A0A6J1J798	1.8e-52	91.80	protein RALF-like 1 OS=Cucurbita maxima OX=3661 GN=LOC111482012 PE=3 SV=1	[more]
A0A5A7TQI0	6.9e-52	89.26	Protein RALF-like 33 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G...	[more]
A0A0A0KWI2	6.9e-52	88.52	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G001640 PE=3 SV=1	[more]
A0A6J5XM33	1.7e-29	61.16	Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS34632 PE=3 S...	[more]

BLAST of Lcy02g002710 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022934551.1	2.2e-52	91.80	protein RALF-like 1 [Cucurbita moschata]	[more]
XP_022983404.1	3.8e-52	91.80	protein RALF-like 1 [Cucurbita maxima]	[more]
KGN52797.1	1.4e-51	88.52	hypothetical protein Csa_014956 [Cucumis sativus]	[more]
XP_023529110.1	1.4e-51	90.98	protein RALF-like 33 [Cucurbita pepo subsp. pepo]	[more]
KAA0044366.1	1.4e-51	89.26	protein RALF-like 33 [Cucumis melo var. makuwa]	[more]

BLAST of Lcy02g002710 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G15800.1	4.5e-27	52.46	ralf-like 33	[more]
AT1G02900.1	5.5e-25	53.45	rapid alkalinization factor 1	[more]
AT3G16570.1	8.7e-23	47.41	rapid alkalinization factor 23	[more]
AT3G05490.1	2.4e-20	60.00	ralf-like 22	[more]
AT2G33775.1	2.1e-16	44.68	ralf-like 19	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008801	Rapid ALkalinization Factor	PFAM	PF05498	RALF	coord: 60..120 e-value: 1.8E-27 score: 96.1
None	No IPR available	PANTHER	PTHR33136	RAPID ALKALINIZATION FACTOR-LIKE	coord: 9..121
None	No IPR available	PANTHER	PTHR33136:SF50	PROTEIN RALF-LIKE 33	coord: 9..121

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy02g002710.1	Lcy02g002710.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019722	calcium-mediated signaling
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016021	integral component of membrane