Lcy02g002320 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy02g002320
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	RING/FYVE/PHD zinc finger superfamily protein
Location	Chr02: 3156680 .. 3159341 (+)
RNA-Seq Expression	Lcy02g002320
Synteny	Lcy02g002320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTCAACAGATGCAGATAATATGATATCTTCGGTAGATATCGATATTGAGTCCATATCACCTTCAAGTAAACTTGTTCAGTGCAGAATTTGTCATGATGACGATGATGAATCAAATATGGAGACTCCGTGCTCTTGCTGTGGAAGCTTGAAGGTTAGATTTAGTTTAGTCAACACCAACTGGTTTCACTGATAAAACTCAGTTAGCTATTCTTTGAATCTCTCTTTTCCAAATTCTATGGCTGACTAAACTGGTTTCAACAATGTTCTTGTCAACATTTTTTGCATTTAGTGTAGTATCCAACTTTATCTTTTCCCCTCAAATGTTTGCCCAGGATGTTATAATATCAGTCAGGTGCCTCAGTTTATATTTACTTGTTATTAGACTGAAAAGGTTAGAATCAGATTCATGGCACAGATAGGGCATCCTGTTCCTGGTTTCCTTTCCCTTTCCAATCCTTATTCCTCGTTGTGTTCGCTTAGATGGTTCACCTTGATAATTAGCTTCCAATTAGTGTTGATAATTGCAGTATGCTCATCGTAAATGCGTTCAGCGGTGGTGCGACGAGAAAGGCAATACAACCTGTGAGATTTGCCACCAGGTCTGTTGTTTTTATTAAAAAAAAAAAATCTCTTATACAGGGCTAAATTTGTTGTAGTAAGAAGTCTTTTTTTCTTATACTGCAGGACTTTAAGCCCGGGTATACAGCACCTCCCCCTGTGTTTTATTATGGAGGTATTAGTTCACCAATACATTTCAGGTAAGCCATTTACCTCCAGTGCATTTCATTTCACCTGCAAGTTTCTCTAGCTTATCTTGTATATTAAATTCCTGTTCATTCAGTTTCTTAACGTTATTGATTTAACGACGCTGTCATCAAATTGTGTGGTCTTAGGGGAAGTTGGGAGATGTCTAGACTGAACCTGCATGTACCTGCAGGAATGCCTGATCACGAGTATCTCGATTCTGACTTTGATGATTTCCTCGCTCCCTCTCCAAGAAGTGTATTGTGCTGCCGCATAGTTGCAGTAATTGTATTATTCCCTATCTCTTCATTTTACTTCATTTTCTGTTTTCCTATCTCTGTAAACAAACTTTCAGGGTCTCGGTAATTGGCTTTGCCTTTAGCAGATGGAAACAAATTTTAAGGGGATTGTTGGTCAATCCAACTGTCCTAATGTTACAATCCCCAGTTTAAAACTGCTAATTATTTTTTTTTATAAGAAACATCAAAGGAGAATATATTAAACACAAAAAAGGGGACTGCCTAAAGGCCGGGGTGGAGATCACCCCTCCCAAAACTATCTCAAAAGGGCTTGCCAATCACCAATAATCATAAGCAAGCTATAATTACAAAAGAACTTTTTGTATGAAGAAATCCACCAAGAGGCCGTATTTTGTACAGAATTACAAAAAAAAATCAAAAGAAGACGACTTATCCCCAAAGGTTCTAGCATATCTTTCCTTCCATAAAAGCCAAATGGAAGCTCTAAACGCACAACCCGCTATCACCTTGGCCTTCTTTCTCAAATTCCAAGCTTGCAGCCCTTCTTCAAGCCAATCATCCACCCTCTTCGGTTTATCGTATGTCTGCTAATTATATATCTGTATGTTGCAGTTTATCGTTCTCCTCGTTTTACGCCATACTCTACCGATTGTAATTAGTGGAGCTGGAGAGTATTCATTGACATTGTTAATGGTAAGCTCGTAGCTTGGTTTTCCCCTTAGCCCTCCATTTTTGTGACCAATGAAGAACCACAAGTTCATCTGCTGCATGTTACAGTTGCTAATCTTGAGAATTGTTGGGATTCTTCTGCCTATATATGTCATGGTTAGAGCATTTACTTCCATTCAACGACGGCGTTATTATCAGGTTAGTGACGCAGTTTATATCTAGAATTGTTTTGAATAATATTTTGTTGTATGAATTGCTCGGATTTCTGAGGGAGTTGATTCAGTATGAGGTTGAAATATCATGTTTGATATGAATTTTTGTTGAGCTTTTCTTTTACAGTCGTATTCTCTTGTTTAACCACATTTTTTATTGTAATCACTGCATATTGGTTTAATGTTCCATGAGATTAGTCAAGGTACGTATAAGCTACCTAACCAACTTGATCATCCATGACCTTTTTTAAAAGAAAGACACCTATGAGTTTGTGAATTTTAAATGAACAAAAGAACAAATGCCTTTTCTAGTTCTTTTTGGTTCTTAAGTTCCAAAAATTTACCATTTAATTCCAAAGTTAATGATTAGGAGAGGAGGGGGAAAAAAGTGTCCCTAGGTCCAGTGTGTATATATATTTTTTAAATAAGAAAAAAAAAAGATTAAAAGAGTGTCACTGGGTCCATCCAATTGTACTTTTTTCACTCTTCAACAATAAGCTTTTTGTTTCTTAGAGGGAAAAAAAAGTTATGATTGTACTTTCCTATGTAAGAACACCAACCATGATATGGGGTAGAAAGTGCATATTCCTGAAAATGGTTCTGGTTATTTGTTCTCTTTGAACTTGATGTCTATTCATTTACATTCATCGAATACGACGTTTGAGTCTACTAGTATTTTTTTTGGTAGGATCCTCGTCTTCATCTTGCAACATCAGATGACGAAAGTGACTCGACGAATCATTCTCAACCACGCCTCATTCACTTGAGATAG

mRNA sequence

ATGGCCTCAACAGATGCAGATAATATGATATCTTCGGTAGATATCGATATTGAGTCCATATCACCTTCAAGTAAACTTGTTCAGTGCAGAATTTGTCATGATGACGATGATGAATCAAATATGGAGACTCCGTGCTCTTGCTGTGGAAGCTTGAAGTATGCTCATCGTAAATGCGTTCAGCGGTGGTGCGACGAGAAAGGCAATACAACCTGTGAGATTTGCCACCAGGACTTTAAGCCCGGGTATACAGCACCTCCCCCTGTGTTTTATTATGGAGGTATTAGTTCACCAATACATTTCAGGGGAAGTTGGGAGATGTCTAGACTGAACCTGCATGTACCTGCAGGAATGCCTGATCACGAGTATCTCGATTCTGACTTTGATGATTTCCTCGCTCCCTCTCCAAGAAGTGTATTGTGCTGCCGCATAGTTGCAGTAATTTTTATCGTTCTCCTCGTTTTACGCCATACTCTACCGATTGTAATTAGTGGAGCTGGAGAGTATTCATTGACATTGTTAATGTTGCTAATCTTGAGAATTGTTGGGATTCTTCTGCCTATATATGTCATGGTTAGAGCATTTACTTCCATTCAACGACGGCGTTATTATCAGGATCCTCGTCTTCATCTTGCAACATCAGATGACGAAAGTGACTCGACGAATCATTCTCAACCACGCCTCATTCACTTGAGATAG

Coding sequence (CDS)

ATGGCCTCAACAGATGCAGATAATATGATATCTTCGGTAGATATCGATATTGAGTCCATATCACCTTCAAGTAAACTTGTTCAGTGCAGAATTTGTCATGATGACGATGATGAATCAAATATGGAGACTCCGTGCTCTTGCTGTGGAAGCTTGAAGTATGCTCATCGTAAATGCGTTCAGCGGTGGTGCGACGAGAAAGGCAATACAACCTGTGAGATTTGCCACCAGGACTTTAAGCCCGGGTATACAGCACCTCCCCCTGTGTTTTATTATGGAGGTATTAGTTCACCAATACATTTCAGGGGAAGTTGGGAGATGTCTAGACTGAACCTGCATGTACCTGCAGGAATGCCTGATCACGAGTATCTCGATTCTGACTTTGATGATTTCCTCGCTCCCTCTCCAAGAAGTGTATTGTGCTGCCGCATAGTTGCAGTAATTTTTATCGTTCTCCTCGTTTTACGCCATACTCTACCGATTGTAATTAGTGGAGCTGGAGAGTATTCATTGACATTGTTAATGTTGCTAATCTTGAGAATTGTTGGGATTCTTCTGCCTATATATGTCATGGTTAGAGCATTTACTTCCATTCAACGACGGCGTTATTATCAGGATCCTCGTCTTCATCTTGCAACATCAGATGACGAAAGTGACTCGACGAATCATTCTCAACCACGCCTCATTCACTTGAGATAG

Protein sequence

MASTDADNMISSVDIDIESISPSSKLVQCRICHDDDDESNMETPCSCCGSLKYAHRKCVQRWCDEKGNTTCEICHQDFKPGYTAPPPVFYYGGISSPIHFRGSWEMSRLNLHVPAGMPDHEYLDSDFDDFLAPSPRSVLCCRIVAVIFIVLLVLRHTLPIVISGAGEYSLTLLMLLILRIVGILLPIYVMVRAFTSIQRRRYYQDPRLHLATSDDESDSTNHSQPRLIHLR

Homology

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BLAST of Lcy02g002320 vs. ExPASy Swiss-Prot
Match: Q5T0T0 (E3 ubiquitin-protein ligase MARCHF8 OS=Homo sapiens OX=9606 GN=MARCHF8 PE=1 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.2e-09
Identity = 29/61 (47.54%), Postives = 40/61 (65.57%), Query Frame = 0


Query: 19  SISPSSKLVQCRICH-DDDDESNMETPCSCCGSLKYAHRKCVQRWCDEKGNTTCEICHQD 78
           SI+PSS+ + CRICH + DDES + TPC C GSL + H+ C+Q+W        CE+C  +
Sbjct: 71  SITPSSQDI-CRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKYE 130

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BLAST of Lcy02g002320 vs. ExPASy Swiss-Prot
Match: Q5XH39 (E3 ubiquitin-protein ligase MARCHF8 OS=Xenopus laevis OX=8355 GN=marchf8 PE=2 SV=2)

HSP 1 Score: 63.9 bits (154), Expect = 2.7e-09
Identity = 28/61 (45.90%), Postives = 40/61 (65.57%), Query Frame = 0


Query: 19  SISPSSKLVQCRICH-DDDDESNMETPCSCCGSLKYAHRKCVQRWCDEKGNTTCEICHQD 78
           S++PSS+ + CRICH + DDES + TPC C GSL + H+ C+Q+W        CE+C  +
Sbjct: 44  SVTPSSQDI-CRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKFE 103

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BLAST of Lcy02g002320 vs. ExPASy Swiss-Prot
Match: Q28IK8 (E3 ubiquitin-protein ligase MARCHF8 OS=Xenopus tropicalis OX=8364 GN=marchf8 PE=2 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 2.7e-09
Identity = 28/61 (45.90%), Postives = 40/61 (65.57%), Query Frame = 0


Query: 19  SISPSSKLVQCRICH-DDDDESNMETPCSCCGSLKYAHRKCVQRWCDEKGNTTCEICHQD 78
           S++PSS+ + CRICH + DDES + TPC C GSL + H+ C+Q+W        CE+C  +
Sbjct: 44  SVTPSSQDI-CRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKFE 103

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BLAST of Lcy02g002320 vs. ExPASy Swiss-Prot
Match: Q0VD59 (E3 ubiquitin-protein ligase MARCHF8 OS=Bos taurus OX=9913 GN=MARCHF8 PE=2 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 3.5e-09
Identity = 27/61 (44.26%), Postives = 40/61 (65.57%), Query Frame = 0


Query: 19  SISPSSKLVQCRICH-DDDDESNMETPCSCCGSLKYAHRKCVQRWCDEKGNTTCEICHQD 78
           S++PS++ + CRICH + DDES + TPC C GSL + H+ C+Q+W        CE+C  +
Sbjct: 69  SVTPSNQDI-CRICHCEGDDESPLITPCRCTGSLHFVHQTCLQQWIKSSDTRCCELCKYE 128

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BLAST of Lcy02g002320 vs. ExPASy Swiss-Prot
Match: Q9DBD2 (E3 ubiquitin-protein ligase MARCHF8 OS=Mus musculus OX=10090 GN=Marchf8 PE=2 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 3.5e-09
Identity = 27/61 (44.26%), Postives = 40/61 (65.57%), Query Frame = 0


Query: 19  SISPSSKLVQCRICH-DDDDESNMETPCSCCGSLKYAHRKCVQRWCDEKGNTTCEICHQD 78
           S++PS++ + CRICH + DDES + TPC C GSL + H+ C+Q+W        CE+C  +
Sbjct: 67  SVTPSNQDI-CRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKYE 126

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BLAST of Lcy02g002320 vs. ExPASy TrEMBL
Match: A0A6J1FB67 (uncharacterized protein LOC111442434 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111442434 PE=4 SV=1)

HSP 1 Score: 406.8 bits (1044), Expect = 6.2e-110
Identity = 196/231 (84.85%), Postives = 213/231 (92.21%), Query Frame = 0


Query: 1   MASTDADNMISSVDIDIESISPSSKLVQCRICHDDDDESNMETPCSCCGSLKYAHRKCVQ 60
           MAST ADNMISS++ID+E +SPSSKLVQCRICHD+DDES METPCSCCGSLKYAHR CVQ
Sbjct: 32  MASTSADNMISSLNIDVEFMSPSSKLVQCRICHDEDDESKMETPCSCCGSLKYAHRMCVQ 91

Query: 61  RWCDEKGNTTCEICHQDFKPGYTAPPPVFYYGGISSPIHFRGSWEMSRLNLHVPAGMPDH 120
           RWC+EKGNT CEICHQDF+PGYTAP PV YYG I+SP+HFR SWEMSRLNLHVPAGMPDH
Sbjct: 92  RWCNEKGNTICEICHQDFEPGYTAPLPVLYYGDITSPVHFRESWEMSRLNLHVPAGMPDH 151

Query: 121 EYLDSDFDDFLAPSPRSVLCCRIVAVIFIVLLVLRHTLPIVISGAGEYSLTLLMLLILRI 180
           EY DSDFD+F  PSPRS+LCCR+VAV FIVLLVLRHTLPIVISGAGEYSLTLLMLLILRI
Sbjct: 152 EYPDSDFDEFFTPSPRSILCCRMVAVTFIVLLVLRHTLPIVISGAGEYSLTLLMLLILRI 211

Query: 181 VGILLPIYVMVRAFTSIQRRRYYQDPRLHLATSDDESDSTNHSQPRLIHLR 232
           VGILLPIYVMVRAFTSIQ RR+YQDPRLHLAT +DE+DSTNH+Q   IH+R
Sbjct: 212 VGILLPIYVMVRAFTSIQGRRHYQDPRLHLATPEDENDSTNHAQSHFIHVR 262

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BLAST of Lcy02g002320 vs. ExPASy TrEMBL
Match: A0A6J1J9L9 (uncharacterized protein LOC111482515 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482515 PE=4 SV=1)

HSP 1 Score: 403.7 bits (1036), Expect = 5.3e-109
Identity = 195/231 (84.42%), Postives = 212/231 (91.77%), Query Frame = 0


Query: 1   MASTDADNMISSVDIDIESISPSSKLVQCRICHDDDDESNMETPCSCCGSLKYAHRKCVQ 60
           MAST ADNMISS++ID+E +  SSKLVQCRICHD+DDES ME PCSCCGSLKYAHRKCVQ
Sbjct: 32  MASTSADNMISSLNIDVEFMPSSSKLVQCRICHDEDDESKMEAPCSCCGSLKYAHRKCVQ 91

Query: 61  RWCDEKGNTTCEICHQDFKPGYTAPPPVFYYGGISSPIHFRGSWEMSRLNLHVPAGMPDH 120
           RWC+EKGNT CEICHQDF+PGYTAP PV YYG I+SP+HFR SWEMSRLNLHVPAGMPDH
Sbjct: 92  RWCNEKGNTICEICHQDFEPGYTAPLPVLYYGDITSPVHFRESWEMSRLNLHVPAGMPDH 151

Query: 121 EYLDSDFDDFLAPSPRSVLCCRIVAVIFIVLLVLRHTLPIVISGAGEYSLTLLMLLILRI 180
           EY DSDFD+F  PSPRS+LCCR+VAV FIVLLVLRHTLPIVISGAGEYSLTLLMLLILRI
Sbjct: 152 EYPDSDFDEFFTPSPRSILCCRMVAVTFIVLLVLRHTLPIVISGAGEYSLTLLMLLILRI 211

Query: 181 VGILLPIYVMVRAFTSIQRRRYYQDPRLHLATSDDESDSTNHSQPRLIHLR 232
           VGILLPIYVMVRAFTSIQRRR+YQDPRL LAT +DE+DSTNH+Q R IH+R
Sbjct: 212 VGILLPIYVMVRAFTSIQRRRHYQDPRLRLATPEDENDSTNHAQSRFIHVR 262

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BLAST of Lcy02g002320 vs. ExPASy TrEMBL
Match: A0A6J1GAC8 (uncharacterized protein LOC111452226 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111452226 PE=4 SV=1)

HSP 1 Score: 402.9 bits (1034), Expect = 9.0e-109
Identity = 200/231 (86.58%), Postives = 214/231 (92.64%), Query Frame = 0


Query: 1   MASTDADNMISSVDIDIESISPSSKLVQCRICHDDDDESNMETPCSCCGSLKYAHRKCVQ 60
           MAST ADNMISS+DIDIESISPSSKLV+CRICHD+DDESNMETPCSC GSLKYAHR CVQ
Sbjct: 1   MASTTADNMISSIDIDIESISPSSKLVECRICHDEDDESNMETPCSCRGSLKYAHRMCVQ 60

Query: 61  RWCDEKGNTTCEICHQDFKPGYTAPPPVFYYGGISSPIHFRGSWEMSRLNLHVPAGMPDH 120
           RWC+EKGNT CEICHQDFKPGYTAPP VFY  GISS +HFRGSWEMSRLN HVPAGM DH
Sbjct: 61  RWCNEKGNTICEICHQDFKPGYTAPPHVFYNEGISSLMHFRGSWEMSRLNQHVPAGMLDH 120

Query: 121 EYLDSDFDDFLAPSPRSVLCCRIVAVIFIVLLVLRHTLPIVISGAGEYSLTLLMLLILRI 180
           EYLDS FDDF++PSP SVLCCRIVAV+FIVLLVLRHTLPI+ISGAGEYSLTLLMLLILRI
Sbjct: 121 EYLDSAFDDFISPSPCSVLCCRIVAVMFIVLLVLRHTLPIIISGAGEYSLTLLMLLILRI 180

Query: 181 VGILLPIYVMVRAFTSIQRRRYYQDPRLHLATSDDESDSTNHSQPRLIHLR 232
           VGILLPIYVMVR FTSI+RRR+YQDP  HLATSDDESDS +HSQPR I++R
Sbjct: 181 VGILLPIYVMVRVFTSIRRRRHYQDPPHHLATSDDESDSMSHSQPRFINMR 231

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BLAST of Lcy02g002320 vs. ExPASy TrEMBL
Match: A0A6J1CNE6 (uncharacterized protein LOC111013195 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111013195 PE=4 SV=1)

HSP 1 Score: 399.4 bits (1025), Expect = 9.9e-108
Identity = 194/231 (83.98%), Postives = 211/231 (91.34%), Query Frame = 0


Query: 1   MASTDADNMISSVDIDIESISPSSKLVQCRICHDDDDESNMETPCSCCGSLKYAHRKCVQ 60
           MAST+ DN+ISS++ID++S+ PSSK V+CRICHD+D ESNMETPCSCCGSLKYAHRKCVQ
Sbjct: 32  MASTNVDNVISSLNIDVDSMLPSSKSVECRICHDEDVESNMETPCSCCGSLKYAHRKCVQ 91

Query: 61  RWCDEKGNTTCEICHQDFKPGYTAPPPVFYYGGISSPIHFRGSWEMSRLNLHVPAGMPDH 120
           RWC+EKGNT CEICHQ FKPG+TAPPPVFYYGGI SPIHFRG+WEMSRLNLHV AGMPDH
Sbjct: 92  RWCNEKGNTMCEICHQQFKPGFTAPPPVFYYGGIGSPIHFRGNWEMSRLNLHVSAGMPDH 151

Query: 121 EYLDSDFDDFLAPSPRSVLCCRIVAVIFIVLLVLRHTLPIVISGAGEYSLTLLMLLILRI 180
           +Y+DSD DDFLAPSPRSVLCCRIVAVIFIVLL+LRHTLPI+ISG GEYSLTLLMLLILRI
Sbjct: 152 DYVDSDIDDFLAPSPRSVLCCRIVAVIFIVLLLLRHTLPIIISGTGEYSLTLLMLLILRI 211

Query: 181 VGILLPIYVMVRAFTSIQRRRYYQDPRLHLATSDDESDSTNHSQPRLIHLR 232
           VGILLPIYVMVRAFTS QRRR+YQDP       DDESDSTNH QPR IHLR
Sbjct: 212 VGILLPIYVMVRAFTSSQRRRHYQDP------LDDESDSTNHPQPRFIHLR 256

[Close]

BLAST of Lcy02g002320 vs. ExPASy TrEMBL
Match: A0A6J1CPU3 (uncharacterized protein LOC111013195 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111013195 PE=4 SV=1)

HSP 1 Score: 399.4 bits (1025), Expect = 9.9e-108
Identity = 194/231 (83.98%), Postives = 211/231 (91.34%), Query Frame = 0


Query: 1   MASTDADNMISSVDIDIESISPSSKLVQCRICHDDDDESNMETPCSCCGSLKYAHRKCVQ 60
           MAST+ DN+ISS++ID++S+ PSSK V+CRICHD+D ESNMETPCSCCGSLKYAHRKCVQ
Sbjct: 40  MASTNVDNVISSLNIDVDSMLPSSKSVECRICHDEDVESNMETPCSCCGSLKYAHRKCVQ 99

Query: 61  RWCDEKGNTTCEICHQDFKPGYTAPPPVFYYGGISSPIHFRGSWEMSRLNLHVPAGMPDH 120
           RWC+EKGNT CEICHQ FKPG+TAPPPVFYYGGI SPIHFRG+WEMSRLNLHV AGMPDH
Sbjct: 100 RWCNEKGNTMCEICHQQFKPGFTAPPPVFYYGGIGSPIHFRGNWEMSRLNLHVSAGMPDH 159

Query: 121 EYLDSDFDDFLAPSPRSVLCCRIVAVIFIVLLVLRHTLPIVISGAGEYSLTLLMLLILRI 180
           +Y+DSD DDFLAPSPRSVLCCRIVAVIFIVLL+LRHTLPI+ISG GEYSLTLLMLLILRI
Sbjct: 160 DYVDSDIDDFLAPSPRSVLCCRIVAVIFIVLLLLRHTLPIIISGTGEYSLTLLMLLILRI 219

Query: 181 VGILLPIYVMVRAFTSIQRRRYYQDPRLHLATSDDESDSTNHSQPRLIHLR 232
           VGILLPIYVMVRAFTS QRRR+YQDP       DDESDSTNH QPR IHLR
Sbjct: 220 VGILLPIYVMVRAFTSSQRRRHYQDP------LDDESDSTNHPQPRFIHLR 264

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BLAST of Lcy02g002320 vs. NCBI nr
Match: XP_023528859.1 (uncharacterized protein LOC111791660 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023528860.1 uncharacterized protein LOC111791660 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023528861.1 uncharacterized protein LOC111791660 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 410.6 bits (1054), Expect = 8.9e-111
Identity = 198/231 (85.71%), Postives = 215/231 (93.07%), Query Frame = 0


Query: 1   MASTDADNMISSVDIDIESISPSSKLVQCRICHDDDDESNMETPCSCCGSLKYAHRKCVQ 60
           MAST ADNMISS++ID+E +SPSSKLVQCRICHD+DDES METPCSCCGSLKYAHRKCVQ
Sbjct: 32  MASTSADNMISSLNIDVEFMSPSSKLVQCRICHDEDDESKMETPCSCCGSLKYAHRKCVQ 91

Query: 61  RWCDEKGNTTCEICHQDFKPGYTAPPPVFYYGGISSPIHFRGSWEMSRLNLHVPAGMPDH 120
           RWC+EKGNT CEICHQDF+PGYTAP PV YYG I+SP+HFR SWEMSRLNLHVPAGMPDH
Sbjct: 92  RWCNEKGNTICEICHQDFEPGYTAPLPVLYYGDITSPVHFRESWEMSRLNLHVPAGMPDH 151

Query: 121 EYLDSDFDDFLAPSPRSVLCCRIVAVIFIVLLVLRHTLPIVISGAGEYSLTLLMLLILRI 180
           EY DSDFD+F  PSPRS+LCCR+VAV FIVLLVLRHTLPIVISGAGEYSLTLLMLLILRI
Sbjct: 152 EYPDSDFDEFFTPSPRSILCCRMVAVTFIVLLVLRHTLPIVISGAGEYSLTLLMLLILRI 211

Query: 181 VGILLPIYVMVRAFTSIQRRRYYQDPRLHLATSDDESDSTNHSQPRLIHLR 232
           VGILLPIYVMVRAFTSIQRRR+YQDPRL LAT +DE+DSTNH+Q R IH+R
Sbjct: 212 VGILLPIYVMVRAFTSIQRRRHYQDPRLRLATPEDENDSTNHAQSRFIHVR 262

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BLAST of Lcy02g002320 vs. NCBI nr
Match: XP_023522606.1 (uncharacterized protein LOC111786585 isoform X3 [Cucurbita pepo subsp. pepo] >XP_023522612.1 uncharacterized protein LOC111786585 isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 408.3 bits (1048), Expect = 4.4e-110
Identity = 202/231 (87.45%), Postives = 216/231 (93.51%), Query Frame = 0


Query: 1   MASTDADNMISSVDIDIESISPSSKLVQCRICHDDDDESNMETPCSCCGSLKYAHRKCVQ 60
           MAST+ADNMISS+DIDIESISPSSKLV+CRICHD+DDESNMETPCSC GSLKYAHR CVQ
Sbjct: 1   MASTNADNMISSIDIDIESISPSSKLVECRICHDEDDESNMETPCSCRGSLKYAHRMCVQ 60

Query: 61  RWCDEKGNTTCEICHQDFKPGYTAPPPVFYYGGISSPIHFRGSWEMSRLNLHVPAGMPDH 120
           RWC+EKGNT CEICHQDFKPGYTAPP VFY GGISS +HFRGSWEMSRLN HVPAGM DH
Sbjct: 61  RWCNEKGNTICEICHQDFKPGYTAPPHVFYNGGISSLMHFRGSWEMSRLNQHVPAGMLDH 120

Query: 121 EYLDSDFDDFLAPSPRSVLCCRIVAVIFIVLLVLRHTLPIVISGAGEYSLTLLMLLILRI 180
           EYLDS FDDF++PSP SVLCCRIVAV+FIVLLVLRHTLPI+ISGAGEYSLTLLMLLILRI
Sbjct: 121 EYLDSAFDDFISPSPCSVLCCRIVAVMFIVLLVLRHTLPIIISGAGEYSLTLLMLLILRI 180

Query: 181 VGILLPIYVMVRAFTSIQRRRYYQDPRLHLATSDDESDSTNHSQPRLIHLR 232
           VGILLPIYVMVR FTSI+RRR+YQDP  HLATSDDESDST+HSQPR I +R
Sbjct: 181 VGILLPIYVMVRVFTSIRRRRHYQDPPHHLATSDDESDSTSHSQPRFIDMR 231

[Close]

BLAST of Lcy02g002320 vs. NCBI nr
Match: XP_022935629.1 (uncharacterized protein LOC111442434 isoform X1 [Cucurbita moschata] >XP_022935630.1 uncharacterized protein LOC111442434 isoform X1 [Cucurbita moschata] >XP_022935631.1 uncharacterized protein LOC111442434 isoform X1 [Cucurbita moschata] >XP_022935632.1 uncharacterized protein LOC111442434 isoform X1 [Cucurbita moschata] >XP_022935633.1 uncharacterized protein LOC111442434 isoform X1 [Cucurbita moschata] >XP_022935634.1 uncharacterized protein LOC111442434 isoform X1 [Cucurbita moschata] >XP_022935635.1 uncharacterized protein LOC111442434 isoform X1 [Cucurbita moschata] >XP_022935636.1 uncharacterized protein LOC111442434 isoform X1 [Cucurbita moschata] >XP_022935637.1 uncharacterized protein LOC111442434 isoform X1 [Cucurbita moschata] >XP_022935638.1 uncharacterized protein LOC111442434 isoform X1 [Cucurbita moschata] >XP_022935640.1 uncharacterized protein LOC111442434 isoform X1 [Cucurbita moschata] >XP_022935641.1 uncharacterized protein LOC111442434 isoform X1 [Cucurbita moschata] >XP_022935643.1 uncharacterized protein LOC111442434 isoform X1 [Cucurbita moschata])

HSP 1 Score: 406.8 bits (1044), Expect = 1.3e-109
Identity = 196/231 (84.85%), Postives = 213/231 (92.21%), Query Frame = 0


Query: 1   MASTDADNMISSVDIDIESISPSSKLVQCRICHDDDDESNMETPCSCCGSLKYAHRKCVQ 60
           MAST ADNMISS++ID+E +SPSSKLVQCRICHD+DDES METPCSCCGSLKYAHR CVQ
Sbjct: 32  MASTSADNMISSLNIDVEFMSPSSKLVQCRICHDEDDESKMETPCSCCGSLKYAHRMCVQ 91

Query: 61  RWCDEKGNTTCEICHQDFKPGYTAPPPVFYYGGISSPIHFRGSWEMSRLNLHVPAGMPDH 120
           RWC+EKGNT CEICHQDF+PGYTAP PV YYG I+SP+HFR SWEMSRLNLHVPAGMPDH
Sbjct: 92  RWCNEKGNTICEICHQDFEPGYTAPLPVLYYGDITSPVHFRESWEMSRLNLHVPAGMPDH 151

Query: 121 EYLDSDFDDFLAPSPRSVLCCRIVAVIFIVLLVLRHTLPIVISGAGEYSLTLLMLLILRI 180
           EY DSDFD+F  PSPRS+LCCR+VAV FIVLLVLRHTLPIVISGAGEYSLTLLMLLILRI
Sbjct: 152 EYPDSDFDEFFTPSPRSILCCRMVAVTFIVLLVLRHTLPIVISGAGEYSLTLLMLLILRI 211

Query: 181 VGILLPIYVMVRAFTSIQRRRYYQDPRLHLATSDDESDSTNHSQPRLIHLR 232
           VGILLPIYVMVRAFTSIQ RR+YQDPRLHLAT +DE+DSTNH+Q   IH+R
Sbjct: 212 VGILLPIYVMVRAFTSIQGRRHYQDPRLHLATPEDENDSTNHAQSHFIHVR 262

[Close]

BLAST of Lcy02g002320 vs. NCBI nr
Match: XP_038901862.1 (uncharacterized protein LOC120088347 isoform X3 [Benincasa hispida])

HSP 1 Score: 406.4 bits (1043), Expect = 1.7e-109
Identity = 198/231 (85.71%), Postives = 214/231 (92.64%), Query Frame = 0


Query: 1   MASTDADNMISSVDIDIESISPSSKLVQCRICHDDDDESNMETPCSCCGSLKYAHRKCVQ 60
           MAST+ADNMISS++ID+ES+SPSS +VQCRICHD+DD+SNMETPCSCCGSLKYAHRKCVQ
Sbjct: 32  MASTNADNMISSLNIDVESVSPSS-IVQCRICHDEDDDSNMETPCSCCGSLKYAHRKCVQ 91

Query: 61  RWCDEKGNTTCEICHQDFKPGYTAPPPVFYYGGISSPIHFRGSWEMSRLNLHVPAGMPDH 120
           RW +EKGNT CEICHQDFKPGYTAPPPVFY G ISSPIHFRG+WEMSRLNLHVPAG PD 
Sbjct: 92  RWSNEKGNTICEICHQDFKPGYTAPPPVFYCGDISSPIHFRGNWEMSRLNLHVPAGTPDQ 151

Query: 121 EYLDSDFDDFLAPSPRSVLCCRIVAVIFIVLLVLRHTLPIVISGAGEYSLTLLMLLILRI 180
           EYLDSDFD+F APSPRS+LCCR+VAVIFI LLVLRHTLPIVISGAG YS TLLML+ILRI
Sbjct: 152 EYLDSDFDEFFAPSPRSILCCRVVAVIFIALLVLRHTLPIVISGAGGYSFTLLMLMILRI 211

Query: 181 VGILLPIYVMVRAFTSIQRRRYYQDPRLHLATSDDESDSTNHSQPRLIHLR 232
           VGILLPIYVMV+AFTSIQRRR+YQ PRL L TSDDE DSTNHSQ R IHLR
Sbjct: 212 VGILLPIYVMVKAFTSIQRRRHYQAPRLQLTTSDDEGDSTNHSQSRFIHLR 261

[Close]

BLAST of Lcy02g002320 vs. NCBI nr
Match: KAG7017957.1 (E3 ubiquitin-protein ligase MARCH8, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 406.0 bits (1042), Expect = 2.2e-109
Identity = 197/231 (85.28%), Postives = 214/231 (92.64%), Query Frame = 0


Query: 1   MASTDADNMISSVDIDIESISPSSKLVQCRICHDDDDESNMETPCSCCGSLKYAHRKCVQ 60
           MAST ADNMISS++ID+E +SPSSKLVQCRICHD+DDES METPCSC GSLKYAHRKCVQ
Sbjct: 85  MASTSADNMISSLNIDVEFMSPSSKLVQCRICHDEDDESKMETPCSCRGSLKYAHRKCVQ 144

Query: 61  RWCDEKGNTTCEICHQDFKPGYTAPPPVFYYGGISSPIHFRGSWEMSRLNLHVPAGMPDH 120
           RWC+EKGNT CEICHQDF+PGYTAP PV YYG I+SP+HFR SWEMSRLNLHVPAGMPDH
Sbjct: 145 RWCNEKGNTICEICHQDFEPGYTAPLPVLYYGDITSPVHFRESWEMSRLNLHVPAGMPDH 204

Query: 121 EYLDSDFDDFLAPSPRSVLCCRIVAVIFIVLLVLRHTLPIVISGAGEYSLTLLMLLILRI 180
           EY DSDFD+F  PSPRS+LCCR+VAV FIVLLVLRHTLPIVISGAGEYSLTLLMLLILRI
Sbjct: 205 EYPDSDFDEFFTPSPRSILCCRMVAVTFIVLLVLRHTLPIVISGAGEYSLTLLMLLILRI 264

Query: 181 VGILLPIYVMVRAFTSIQRRRYYQDPRLHLATSDDESDSTNHSQPRLIHLR 232
           VGILLPIYVMVRAFTSIQRRR+YQDPRL LAT +DE+DSTNH+Q R IH+R
Sbjct: 265 VGILLPIYVMVRAFTSIQRRRHYQDPRLRLATPEDENDSTNHAQSRFIHVR 315

[Close]

BLAST of Lcy02g002320 vs. TAIR 10
Match: AT5G38070.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 201.8 bits (512), Expect = 5.9e-52
Identity = 107/219 (48.86%), Postives = 151/219 (68.95%), Query Frame = 0


Query: 6   ADNMISSVDID--IESISP-----SSKLVQCRICHDDDDESNMETPCSCCGSLKYAHRKC 65
           AD    SV+ D   ESIS       SK VQCRICHD+D+++NM+TPCSC G+LK+AH  C
Sbjct: 24  ADPKADSVNEDGVSESISAGADLCESKFVQCRICHDEDEDTNMDTPCSCSGTLKFAHHNC 83

Query: 66  VQRWCDEKGNTTCEICHQDFKPGYTAPPPVFYYGGISSPIHFRGSWEMSRLNLHVPAGMP 125
           VQRWC+EKG+T CEIC Q +KPGYTAP  +F+Y GIS  ++F   W +  L+L  P  + 
Sbjct: 84  VQRWCNEKGDTVCEICRQQYKPGYTAPRQLFHYTGIS--MNFGSDWGIEGLDLRNPYFLT 143

Query: 126 DHEYLDSDFDDFLAPSPRSVLCCRIVAVIFIVLLVLRHTLPIVISGAGEYSLTLLMLLIL 185
             +  D D D +   SP S++CCR++A++F++LL LRH+LP+++ G  ++S+TLLML ++
Sbjct: 144 WGD-ADDDHDLYSFHSPTSLICCRLIALLFVLLLFLRHSLPVLLGGVDDFSITLLMLPLV 203

Query: 186 RIVGILLPIYVMVRAFTSIQRRRYYQDPRLHLATSDDES 218
           R +GILL  YV  ++F  IQR R  +D RL   +SD+E+
Sbjct: 204 RTLGILLIAYVFFKSFIVIQRCRQERDTRLSGFSSDEET 239

[Close]

BLAST of Lcy02g002320 vs. TAIR 10
Match: AT2G01275.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 199.1 bits (505), Expect = 3.8e-51
Identity = 98/195 (50.26%), Postives = 136/195 (69.74%), Query Frame = 0


Query: 26  LVQCRICHDDDDESNMETPCSCCGSLKYAHRKCVQRWCDEKGNTTCEICHQDFKPGYTAP 85
           + +CRICHD+D +SNMETPCSC GS+KYAHR+CVQRWC+EKG+TTCEICHQ+FKP YTAP
Sbjct: 56  MAECRICHDEDLDSNMETPCSCSGSVKYAHRRCVQRWCNEKGDTTCEICHQEFKPDYTAP 115

Query: 86  PPVFYYGGISSPIHFRGSWEMSRLNLHVPAGMP-DHEYLDSDFDDFLAPSPRSVLCCRIV 145
           PP+   G +  P+HFRG+W +S+        +P D  ++D  +      S  S +CCR +
Sbjct: 116 PPLLELGHV--PLHFRGNWGISQREHRFITVVPADSTFIDQPYP---LSSTTSFICCRSL 175

Query: 146 AVIFIVLLVLRHTLPIVISGAGEYSLTLLMLLILRIVGILLPIYVMVRAFTSIQRRRYYQ 205
            +IF+ LL+LRHTLP+V++G+  +   L  LL LRI+GI+LPIYV+ +A  + +R     
Sbjct: 176 VLIFMALLILRHTLPLVLTGSNLHVFPLFTLLFLRILGIMLPIYVVTKAVATCRRHSRTL 235

Query: 206 DPRLHLATSDDESDS 220
           D      +SD+E+DS
Sbjct: 236 DTSPSDDSSDEETDS 245

[Close]

BLAST of Lcy02g002320 vs. TAIR 10
Match: AT2G01275.2 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 199.1 bits (505), Expect = 3.8e-51
Identity = 98/195 (50.26%), Postives = 136/195 (69.74%), Query Frame = 0


Query: 26  LVQCRICHDDDDESNMETPCSCCGSLKYAHRKCVQRWCDEKGNTTCEICHQDFKPGYTAP 85
           + +CRICHD+D +SNMETPCSC GS+KYAHR+CVQRWC+EKG+TTCEICHQ+FKP YTAP
Sbjct: 56  MAECRICHDEDLDSNMETPCSCSGSVKYAHRRCVQRWCNEKGDTTCEICHQEFKPDYTAP 115

Query: 86  PPVFYYGGISSPIHFRGSWEMSRLNLHVPAGMP-DHEYLDSDFDDFLAPSPRSVLCCRIV 145
           PP+   G +  P+HFRG+W +S+        +P D  ++D  +      S  S +CCR +
Sbjct: 116 PPLLELGHV--PLHFRGNWGISQREHRFITVVPADSTFIDQPYP---LSSTTSFICCRSL 175

Query: 146 AVIFIVLLVLRHTLPIVISGAGEYSLTLLMLLILRIVGILLPIYVMVRAFTSIQRRRYYQ 205
            +IF+ LL+LRHTLP+V++G+  +   L  LL LRI+GI+LPIYV+ +A  + +R     
Sbjct: 176 VLIFMALLILRHTLPLVLTGSNLHVFPLFTLLFLRILGIMLPIYVVTKAVATCRRHSRTL 235

Query: 206 DPRLHLATSDDESDS 220
           D      +SD+E+DS
Sbjct: 236 DTSPSDDSSDEETDS 245

[Close]

BLAST of Lcy02g002320 vs. TAIR 10
Match: AT2G02960.2 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 160.2 bits (404), Expect = 2.0e-39
Identity = 95/226 (42.04%), Postives = 128/226 (56.64%), Query Frame = 0


Query: 10  ISSVDIDIESISPSSKLVQCRICHDDDDESNMETPCSCCGSLKYAHRKCVQRWCDEKGNT 69
           IS  D D E+  P     +CRIC D+    N+E+PC+C GSLKYAHRKCVQRWC+EKGN 
Sbjct: 25  ISDDDHDDEN-EPLIVSGECRICSDESPVENLESPCACSGSLKYAHRKCVQRWCNEKGNI 84

Query: 70  TCEICHQDFKPGYTAPPPVFYYGGISSPIHFRGSWEMSRLNLHVP----AGMPDHEYLDS 129
            CEICHQ ++PGYTAPPP        + I   G W +S L++H P        +  YL+S
Sbjct: 85  ICEICHQPYQPGYTAPPPPLQ--PEETTIDIGGGWTISGLDVHDPRLLAIAEAERRYLES 144

Query: 130 DFDDFLAPSPRSVLCCRIVAVIFIVLLVLRHTLPIVISGAGEYS--LTLLMLLILRIVGI 189
           ++ ++ A S      CR  A+I + LL+LRH L I     GE     ++L L++LR  G 
Sbjct: 145 EYVEYTASSASGAAFCRSAALILMALLLLRHALTITDDTDGEEDDPSSILSLVLLRAAGF 204

Query: 190 LLPIYVMVRAFTSIQRRRYYQDPRLHLATSDDESDSTNHSQPRLIH 230
           LLP Y+M  A + +QRRR  Q+     A +   +      QPR +H
Sbjct: 205 LLPCYIMAWAISILQRRRQRQEA---AALATQFALVLQSGQPRTVH 244

[Close]

BLAST of Lcy02g002320 vs. TAIR 10
Match: AT2G02960.4 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 160.2 bits (404), Expect = 2.0e-39
Identity = 95/226 (42.04%), Postives = 128/226 (56.64%), Query Frame = 0


Query: 10  ISSVDIDIESISPSSKLVQCRICHDDDDESNMETPCSCCGSLKYAHRKCVQRWCDEKGNT 69
           IS  D D E+  P     +CRIC D+    N+E+PC+C GSLKYAHRKCVQRWC+EKGN 
Sbjct: 25  ISDDDHDDEN-EPLIVSGECRICSDESPVENLESPCACSGSLKYAHRKCVQRWCNEKGNI 84

Query: 70  TCEICHQDFKPGYTAPPPVFYYGGISSPIHFRGSWEMSRLNLHVP----AGMPDHEYLDS 129
            CEICHQ ++PGYTAPPP        + I   G W +S L++H P        +  YL+S
Sbjct: 85  ICEICHQPYQPGYTAPPPPLQ--PEETTIDIGGGWTISGLDVHDPRLLAIAEAERRYLES 144

Query: 130 DFDDFLAPSPRSVLCCRIVAVIFIVLLVLRHTLPIVISGAGEYS--LTLLMLLILRIVGI 189
           ++ ++ A S      CR  A+I + LL+LRH L I     GE     ++L L++LR  G 
Sbjct: 145 EYVEYTASSASGAAFCRSAALILMALLLLRHALTITDDTDGEEDDPSSILSLVLLRAAGF 204

Query: 190 LLPIYVMVRAFTSIQRRRYYQDPRLHLATSDDESDSTNHSQPRLIH 230
           LLP Y+M  A + +QRRR  Q+     A +   +      QPR +H
Sbjct: 205 LLPCYIMAWAISILQRRRQRQEA---AALATQFALVLQSGQPRTVH 244

The following BLAST results are available for this feature:

BLAST of Lcy02g002320 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5T0T0	1.2e-09	47.54	E3 ubiquitin-protein ligase MARCHF8 OS=Homo sapiens OX=9606 GN=MARCHF8 PE=1 SV=1	[more]
Q5XH39	2.7e-09	45.90	E3 ubiquitin-protein ligase MARCHF8 OS=Xenopus laevis OX=8355 GN=marchf8 PE=2 SV...	[more]
Q28IK8	2.7e-09	45.90	E3 ubiquitin-protein ligase MARCHF8 OS=Xenopus tropicalis OX=8364 GN=marchf8 PE=...	[more]
Q0VD59	3.5e-09	44.26	E3 ubiquitin-protein ligase MARCHF8 OS=Bos taurus OX=9913 GN=MARCHF8 PE=2 SV=1	[more]
Q9DBD2	3.5e-09	44.26	E3 ubiquitin-protein ligase MARCHF8 OS=Mus musculus OX=10090 GN=Marchf8 PE=2 SV=...	[more]

BLAST of Lcy02g002320 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FB67	6.2e-110	84.85	uncharacterized protein LOC111442434 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1J9L9	5.3e-109	84.42	uncharacterized protein LOC111482515 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1GAC8	9.0e-109	86.58	uncharacterized protein LOC111452226 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1CNE6	9.9e-108	83.98	uncharacterized protein LOC111013195 isoform X3 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1CPU3	9.9e-108	83.98	uncharacterized protein LOC111013195 isoform X1 OS=Momordica charantia OX=3673 G...	[more]

BLAST of Lcy02g002320 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023528859.1	8.9e-111	85.71	uncharacterized protein LOC111791660 isoform X1 [Cucurbita pepo subsp. pepo] >XP...	[more]
XP_023522606.1	4.4e-110	87.45	uncharacterized protein LOC111786585 isoform X3 [Cucurbita pepo subsp. pepo] >XP...	[more]
XP_022935629.1	1.3e-109	84.85	uncharacterized protein LOC111442434 isoform X1 [Cucurbita moschata] >XP_0229356...	[more]
XP_038901862.1	1.7e-109	85.71	uncharacterized protein LOC120088347 isoform X3 [Benincasa hispida]	[more]
KAG7017957.1	2.2e-109	85.28	E3 ubiquitin-protein ligase MARCH8, partial [Cucurbita argyrosperma subsp. argyr...	[more]

BLAST of Lcy02g002320 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G38070.1	5.9e-52	48.86	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT2G01275.1	3.8e-51	50.26	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT2G01275.2	3.8e-51	50.26	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT2G02960.2	2.0e-39	42.04	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT2G02960.4	2.0e-39	42.04	RING/FYVE/PHD zinc finger superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011016	Zinc finger, RING-CH-type	SMART	SM00744	ringv_2	coord: 28..75 e-value: 1.3E-21 score: 87.8
IPR011016	Zinc finger, RING-CH-type	PFAM	PF12906	RINGv	coord: 29..74 e-value: 9.4E-13 score: 48.1
IPR011016	Zinc finger, RING-CH-type	PROSITE	PS51292	ZF_RING_CH	coord: 21..81 score: 21.578274
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 16..84 e-value: 5.4E-20 score: 72.7
IPR022143	Protein of unknown function DUF3675	PFAM	PF12428	DUF3675	coord: 80..193 e-value: 2.8E-36 score: 124.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 211..231
None	No IPR available	PANTHER	PTHR23012:SF174	E3 UBIQUITIN-PROTEIN LIGASE MARCH-RELATED	coord: 5..225
None	No IPR available	CDD	cd16495	RING_CH-C4HC3_MARCH	coord: 29..75 e-value: 3.31638E-18 score: 73.5156
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 26..79
IPR033275	E3 ubiquitin-protein ligase MARCH-like	PANTHER	PTHR23012	RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING	coord: 5..225

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy02g002320.1	Lcy02g002320.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004842	ubiquitin-protein transferase activity
molecular_function	GO:0008270	zinc ion binding