Lcy02g001360 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGCTGGAGTTGGTGGAAGTTCAAGGACTTTTGGGATGGTGTTTCAAAAATTCTAGATGCCCAGGAAGCAGGTTTAGCTAGCCATATTATTTGGATAATTTGGCAGAAGAGGAACCAATTGAAACAAGCAAGCAGCAAACAAGATATGGCAACTCACCAATGATATTCTCAACGCAGCAGACAAATTCATATTTGAGAACGAGAATGAGAAATCTAACCAGGGCAAGAAGTCGGAGACCCTCCTGAGTCTCAGACGCTGGAATCCGCCGGGCAGATCTCAATGGAAGCTGAATGTGGATGCACTTGGTTTGAAGCATCAAATTCAGGCGGTTTGGGGTGGATTGCGCGAGACTTTGAAGGTTCTCTGATAGGCGCAGGCTGCAAGAAGATAAATAGAAGATTAGACATCAAAATTCTTGAAGCTATAGCCATGGTCGAAGGTCTCTCACGTTTATCGGAAAGGCTCAGGGTTTACCCGGAGAATTCGCTGCATGAGGTGGTGGTTGAGTCGGATGCTGCCGAAATCGTCAAGCTGATCATCGAAGAATCCGAAGACTTCTCGGAAATTTCCCTCTTGATCGACGAGATTCACGAGGTAGCGAATCGAATGACCCCTGTAACTTTTGTACATTGCCCTCGGGCTGCAAATTTTTTGGCGCATTCTCTGGCGTGCGGAGCTGTTAGAAGCTATAGCCATGGTCGAAGGTCTCTCACGTTTATCGGAATGGATGGTTGTGTTGTTGTAGGGGATGAGTTACCCCCTGGTTTGCCTCAGTTATGGAGGTAG ATGTGCTGGAGTTGGTGGAAGTTCAAGGACTTTTGGGATGGTGTTTCAAAAATTCTAGATGCCCAGGAAGCAGGGCAAGAAGTCGGAGACCCTCCTGAGTCTCAGACGCTGGAATCCGCCGGGCAGATCTCAATGGAAGCTGAATGTGGATGCACTTGGTTTGAAGCATCAAATTCAGGCGGTTTGGGGTGGATTGCGCGAGACTTTGAAGGTTCTCTGATAGGCGCAGGCTGCAAGAAGATAAATAGAAGATTAGACATCAAAATTCTTGAAGCTATAGCCATGGTCGAAGGTCTCTCACGTTTATCGGAAAGGCTCAGGGTTTACCCGGAGAATTCGCTGCATGAGGTGGTGGTTGAGTCGGATGCTGCCGAAATCGTCAAGCTGATCATCGAAGAATCCGAAGACTTCTCGGAAATTTCCCTCTTGATCGACGAGATTCACGAGGTAGCGAATCGAATGACCCCTGTAACTTTTGTACATTGCCCTCGGGCTGCAAATTTTTTGGCGCATTCTCTGGCGTGCGGAGCTGTTAGAAGCTATAGCCATGGTCGAAGGTCTCTCACGTTTATCGGAATGGATGGTTGTGTTGTTGTAGGGGATGAGTTACCCCCTGGTTTGCCTCAGTTATGGAGGTAG ATGTGCTGGAGTTGGTGGAAGTTCAAGGACTTTTGGGATGGTGTTTCAAAAATTCTAGATGCCCAGGAAGCAGGGCAAGAAGTCGGAGACCCTCCTGAGTCTCAGACGCTGGAATCCGCCGGGCAGATCTCAATGGAAGCTGAATGTGGATGCACTTGGTTTGAAGCATCAAATTCAGGCGGTTTGGGGTGGATTGCGCGAGACTTTGAAGGTTCTCTGATAGGCGCAGGCTGCAAGAAGATAAATAGAAGATTAGACATCAAAATTCTTGAAGCTATAGCCATGGTCGAAGGTCTCTCACGTTTATCGGAAAGGCTCAGGGTTTACCCGGAGAATTCGCTGCATGAGGTGGTGGTTGAGTCGGATGCTGCCGAAATCGTCAAGCTGATCATCGAAGAATCCGAAGACTTCTCGGAAATTTCCCTCTTGATCGACGAGATTCACGAGGTAGCGAATCGAATGACCCCTGTAACTTTTGTACATTGCCCTCGGGCTGCAAATTTTTTGGCGCATTCTCTGGCGTGCGGAGCTGTTAGAAGCTATAGCCATGGTCGAAGGTCTCTCACGTTTATCGGAATGGATGGTTGTGTTGTTGTAGGGGATGAGTTACCCCCTGGTTTGCCTCAGTTATGGAGGTAG MCWSWWKFKDFWDGVSKILDAQEAGQEVGDPPESQTLESAGQISMEAECGCTWFEASNSGGLGWIARDFEGSLIGAGCKKINRRLDIKILEAIAMVEGLSRLSERLRVYPENSLHEVVVESDAAEIVKLIIEESEDFSEISLLIDEIHEVANRMTPVTFVHCPRAANFLAHSLACGAVRSYSHGRRSLTFIGMDGCVVVGDELPPGLPQLWR Homology
BLAST of Lcy02g001360 vs. ExPASy TrEMBL
Match: A0A6J1DSV1 (uncharacterized protein LOC111023608 OS=Momordica charantia OX=3673 GN=LOC111023608 PE=4 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 1.4e-10 Identity = 46/138 (33.33%), Postives = 74/138 (53.62%), Query Frame = 0
BLAST of Lcy02g001360 vs. ExPASy TrEMBL
Match: A0A6J1CP26 (uncharacterized protein LOC111013412 OS=Momordica charantia OX=3673 GN=LOC111013412 PE=4 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 6.7e-10 Identity = 45/137 (32.85%), Postives = 72/137 (52.55%), Query Frame = 0
BLAST of Lcy02g001360 vs. ExPASy TrEMBL
Match: A0A6J1DNV9 (uncharacterized protein LOC111022403 OS=Momordica charantia OX=3673 GN=LOC111022403 PE=4 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 4.8e-08 Identity = 39/123 (31.71%), Postives = 72/123 (58.54%), Query Frame = 0
BLAST of Lcy02g001360 vs. ExPASy TrEMBL
Match: A0A803MUM1 (Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 3.1e-07 Identity = 42/121 (34.71%), Postives = 67/121 (55.37%), Query Frame = 0
BLAST of Lcy02g001360 vs. ExPASy TrEMBL
Match: A0A251QFD7 (RNase H domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_2G133200 PE=4 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 3.1e-07 Identity = 36/136 (26.47%), Postives = 66/136 (48.53%), Query Frame = 0
BLAST of Lcy02g001360 vs. NCBI nr
Match: XP_022156777.1 (uncharacterized protein LOC111023608 [Momordica charantia]) HSP 1 Score: 76.6 bits (187), Expect = 2.8e-10 Identity = 46/138 (33.33%), Postives = 74/138 (53.62%), Query Frame = 0
BLAST of Lcy02g001360 vs. NCBI nr
Match: XP_022143535.1 (uncharacterized protein LOC111013412 [Momordica charantia]) HSP 1 Score: 74.3 bits (181), Expect = 1.4e-09 Identity = 45/137 (32.85%), Postives = 72/137 (52.55%), Query Frame = 0
BLAST of Lcy02g001360 vs. NCBI nr
Match: XP_037439691.1 (uncharacterized protein LOC119307722 isoform X1 [Triticum dicoccoides]) HSP 1 Score: 72.8 bits (177), Expect = 4.0e-09 Identity = 50/150 (33.33%), Postives = 83/150 (55.33%), Query Frame = 0
BLAST of Lcy02g001360 vs. NCBI nr
Match: XP_022155262.1 (uncharacterized protein LOC111022403 [Momordica charantia]) HSP 1 Score: 68.2 bits (165), Expect = 1.0e-07 Identity = 39/123 (31.71%), Postives = 72/123 (58.54%), Query Frame = 0
BLAST of Lcy02g001360 vs. NCBI nr
Match: XP_021841246.1 (uncharacterized protein LOC110781352 [Spinacia oleracea]) HSP 1 Score: 66.6 bits (161), Expect = 2.9e-07 Identity = 43/146 (29.45%), Postives = 77/146 (52.74%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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