Lcy02g000560 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy02g000560
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	F-box protein
Location	Chr02: 922326 .. 926171 (-)
RNA-Seq Expression	Lcy02g000560
Synteny	Lcy02g000560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GATCGATTGACTCCGAATTATTCAGCAAATCTTTCTTCGATTGGCGGTTTGTTCTGCGCTTCATCTTCATTTTTCTGTTTCCAATTCCATTGCTTTGCTACTCATTTCGTTTCCTAATGTCGGATCCATTAGAGAGGTACCAAAAGCTTGCCCTAACTGACTCTCTGGCAAAAAGTTATGGCTACCCATTAGCTTGTAAGGAGCTGAGCTTCATTGTCAGAGGCGCTTTCAATAAACTTCCCAAGAATCTCCAATCCCTCATCTACCAACATATTATCACCGCCTTTCATCTCCTTCCGGAGTAAGTTTCGTGTTTGATTTCTTTTCTTTATGTTCATTTTTTCATGAAATGACGGATTCGTTTGATTATTTGTTCTTTTGGGTATCAAAAGATCAGAGAAGATTTGGGTCGCTTTAATTTTGGTTTGGAAATTCAGTAATTTGCATAACTTTACTGGATATCAATTCAGGGGGGGTTTAGAATTGATATGCTGAGTACCCATTTATTTCTTTATGTTCATTTTTACATGAATGTTTTGATTTGGGAAATGTTCCATTTCACTTTCATCGATTAGAAAAGGTTCTTAAGTCCATGGTTTCTGACTGGTTGATTGTACATTACTTATTCAAATGTCGCATCTATCATTTTGTTGTCTTCTGCTTGAGCTTGTCCTGTTAGCTACTTCTATTTGCAACATGTTGCTATGTTACTGTACTAGAATAGTCTTCCAGTTTCTTTTGTGGAGAAGAGTGAGCATCTGTCCCGTTATTGATGGGATAGTTTTCCTTTTAGGCATTATAGTTGGTTGGATATCTTAACAAACACATTTATTGCAAGTGTTAATTGAAGACGACCATAGATTTGTCTATCATAAACCAATTTCCACCTTTAATGGCTTCAGCTGCTAAAGAGGATATGCAATGTAGTTGAGTTTTTGTATGTATAGGAACATAGTTGTGTACACTGTCGATTCCATCTTATGACATTGAAACTGAGCATAACTGCTACTAATCTGTGGCAGCTTCAGGCTCTATTTTTTGTGAATTTCTTCCTCTTTCCTCTCTCTCATTTGTATACAGTACATTTCCTCAATGCTTATTAGAAAATGGGATGTTTAATATAAAATCAATATGAAATTTTCTGATTAAGGTATGGTTGATTTAACAAAAGAATGCAGACGAGCTCTGCTGTTTCGGCTGCACATCTTCTTGCTCAGGGTGTTGAAGCTGCTTTACCTAAGCAAAAGAGGAATTCAGCGATTGTAGAATATAAGAAAGCAATGGTTGCTCATAAGAGGCGTAGTAAAGCACATCAGGAAGAAAAAGGTGAATTGGTTGTAAGAATGGCTTAACTTTCTTTGGCCCCCTCCTTTCTGGGTATTTGCTTTTGTATACATCTAATTGAACGTATCTTAAATTTCATCTTCATGTTTTGCAACGCAATTGATTCCTTTCTCACAATTTTTTTTAGTTTCTGGTCAACTCCCTCAAGACGTGCTCCTCCACATATTCCGCTTTCTAGATATCGAATCTTTAGTTTCTGCTGGACTAGTCTGCCGGTAATTTTCTGTCCTTGAAGCTGATGACATGATATGTCCTTATCTATCAATAAAGTGTGTTATTACCTTAAAGCAATAAAGCTCTTCTATTCAAATATTCAACTTAGTTTACTAGCATTATAAGTTATGACTTATGAGCATAGCTATCGGCATGGTTCCTTTTAAGATAATGGTTATTATATACTCAATATGAAGGTCATGGAATCTAGCAGCAGATGATGAATATCTGTGGCAGTTGCAGTATACAACATTTTTTGGTTGTGCTGATGGCAACAGTAAAACCATTAATGATAAAGACAGTGTGGATGACTTAGCTAGCTCATCTCATGTTGATTGGAAAGAGGAATTCAAGAGAGCATATATAGGTGAGAATTGAGACGGTCTCTAAGTTCTGAACAATATATATGTGTGTATGTGTGGTTTGGTTGGATTTCCCCTGCCATTAAGCGCCCAACTTAAATTTAAGAAGGATACTATCCATGTAGCTCGTAGTTAGAATTAGACATATTATTAGGGTGTTAAAGGCATATTAGTATATAGCCAAGGAATTTAGTTTATTATTAGGAGTTGATTATAAATAGAGTTGGTAGGAGTAGACGAGGGTAGACAATTGTTTAGTGGGTTTAGGCTTAAGCGAGAATACTCAAGGGGGAGGCTTGTTATTTTATTCCTTTATCCTTTTATCCTTTTTCAATATTAATTCTAGTTATTTGGGTTTTATCACTCATGGTTTTGAATTTCATAATAACTATTTGTACCATGGCATTCGGAATGTTAGGTAACTCTTTCAGGAGAAACACATATGGAAGGGGATACTGCCAACACTGTGACACCATAGTTTCCTTTAGTACCTTGAGATGTCCCAATGATCATGGTAGAAATAAAAATAAACAAATCAAGCCTCTGTCAATCAACCAGGTACTTTTCTTTCCACTCTCTTTTTCCTAGGTTCATTTTTAGGGTCTTTTTGGTCAGCTTTTGCTCTTCGAGTGTCTTTGTCGAGTAACATGACTCTCTCTCTCTCTCTGAACATAAGTGTAGTTTGCTTTGGACCTCTAGCTGATGAAAATTTATAAGACATACAAGCAGAGTAGCTTTTCCATTCCGTCCAGCTCACTGAAATGAAACTGCTTCTGCTCATTTGAATGGTCACTTTTTGTGAAACTGACTTCTTTTTAGGCTGATGATAGGATGGCTTTATGGCTATTGATTCTTTTTCAGGGGAAAAAAACACGTCCATGTTCTTTCAGAAGTATCTATAAAGATTTTATAGCTGCTTTTAAGTTTTTCAAGAACACTTTTTTCATGTAGGGTTGTAAATAGGTTGATTGAAATCATTTCATTGGCCAGAACTGATGTTGAATCGGCCCATCAGTTCAATAAAAATTGAAACTAGTTTCTTGAAACCAGTGTTTAAAAAAAAGAGAGAGAATGGATCATCTGACCAGAATCAACAAAAAAACAACCAGATGATAGAAATCAAATTCACTGAAATATTTTGCTTTTGAATTTTATGAAACTAAACCAACTGACCCTTGTTGGTAACTGATGACACCAACTCGATTCGCTGTGATTCTTTTTTTCTCTTTCGCTCCTTGTCATTGTCTTGCACCCCTTCTTTTTATATATTACCAAATGTCATGCAAATTTCAGAATCTTGAATAGTATTCTCAAGCACATTTCATGTCCTTTTCATAACATTATTCCTGGCTGTAGAATTATTTAGATCCTTTGAACTGATCATAATGTGTCAACTTCTTTTAGGTTGTTGAATATGTGTTAAATGGATCTTCCGAATTGATTTATTCTTCAGATAGCGATACTGATTCAGATGAAGTTGTGATTTCTGAGTTTTGGGCTCTTCCAAAGTACTTGGGCAGAAGGCAGTCGAGCTTTTGAGGCGAATTCTTCGTTTTTCGCCCGTCTTTTCACTCATGACAATTGAATACTTTTGTAAATAAGCAAAGTTATAAACACTATCTTGTGGTGCCATCTGACATTAAAGGAGCAGATTGAAAGCTTTGTTGTTGAAAAATACTGTGAAGAAGTTCTATATCTGAGCAGCTTAGATTGTAAATTTATACCAATGTCATTGATAAGGTCATTTTTCCTTCTTTTTTTGGTTGGAAACTTTGTTTTAACCTCATGTTTGGAGGGAGAGACTTGTATATTCACAAAATGCAAAGAGTTATTATTATATACGTATGTATGTATAAAAAGTATTCAAACTATATATCTATATCTATATATATATATAGACATCCTCATGGTTTATATGACCATTTTC

mRNA sequence

GATCGATTGACTCCGAATTATTCAGCAAATCTTTCTTCGATTGGCGGTTTGTTCTGCGCTTCATCTTCATTTTTCTGTTTCCAATTCCATTGCTTTGCTACTCATTTCGTTTCCTAATGTCGGATCCATTAGAGAGGTACCAAAAGCTTGCCCTAACTGACTCTCTGGCAAAAAGTTATGGCTACCCATTAGCTTGTAAGGAGCTGAGCTTCATTGTCAGAGGCGCTTTCAATAAACTTCCCAAGAATCTCCAATCCCTCATCTACCAACATATTATCACCGCCTTTCATCTCCTTCCGGAAATGCAGACGAGCTCTGCTGTTTCGGCTGCACATCTTCTTGCTCAGGGTGTTGAAGCTGCTTTACCTAAGCAAAAGAGGAATTCAGCGATTGTAGAATATAAGAAAGCAATGGTTGCTCATAAGAGGCGTAGTAAAGCACATCAGGAAGAAAAAGTTTCTGGTCAACTCCCTCAAGACGTGCTCCTCCACATATTCCGCTTTCTAGATATCGAATCTTTAGTTTCTGCTGGACTAGTCTGCCGGTCATGGAATCTAGCAGCAGATGATGAATATCTGTGGCAGTTGCAGTATACAACATTTTTTGGTTGTGCTGATGGCAACAGTAAAACCATTAATGATAAAGACAGTGTGGATGACTTAGCTAGCTCATCTCATGTTGATTGGAAAGAGGAATTCAAGAGAGCATATATAGGTAACTCTTTCAGGAGAAACACATATGGAAGGGGATACTGCCAACACTGTGACACCATAGTTTCCTTTAGTACCTTGAGATGTCCCAATGATCATGGTAGAAATAAAAATAAACAAATCAAGCCTCTGTCAATCAACCAGGTTGTTGAATATGTGTTAAATGGATCTTCCGAATTGATTTATTCTTCAGATAGCGATACTGATTCAGATGAAGTTGTGATTTCTGAGTTTTGGGCTCTTCCAAAGTACTTGGGCAGAAGGCAGTCGAGCTTTTGAGGCGAATTCTTCGTTTTTCGCCCGTCTTTTCACTCATGACAATTGAATACTTTTGTAAATAAGCAAAGTTATAAACACTATCTTGTGGTGCCATCTGACATTAAAGGAGCAGATTGAAAGCTTTGTTGTTGAAAAATACTGTGAAGAAGTTCTATATCTGAGCAGCTTAGATTGTAAATTTATACCAATGTCATTGATAAGGTCATTTTTCCTTCTTTTTTTGGTTGGAAACTTTGTTTTAACCTCATGTTTGGAGGGAGAGACTTGTATATTCACAAAATGCAAAGAGTTATTATTATATACGTATGTATGTATAAAAAGTATTCAAACTATATATCTATATCTATATATATATATAGACATCCTCATGGTTTATATGACCATTTTC

Coding sequence (CDS)

ATGTCGGATCCATTAGAGAGGTACCAAAAGCTTGCCCTAACTGACTCTCTGGCAAAAAGTTATGGCTACCCATTAGCTTGTAAGGAGCTGAGCTTCATTGTCAGAGGCGCTTTCAATAAACTTCCCAAGAATCTCCAATCCCTCATCTACCAACATATTATCACCGCCTTTCATCTCCTTCCGGAAATGCAGACGAGCTCTGCTGTTTCGGCTGCACATCTTCTTGCTCAGGGTGTTGAAGCTGCTTTACCTAAGCAAAAGAGGAATTCAGCGATTGTAGAATATAAGAAAGCAATGGTTGCTCATAAGAGGCGTAGTAAAGCACATCAGGAAGAAAAAGTTTCTGGTCAACTCCCTCAAGACGTGCTCCTCCACATATTCCGCTTTCTAGATATCGAATCTTTAGTTTCTGCTGGACTAGTCTGCCGGTCATGGAATCTAGCAGCAGATGATGAATATCTGTGGCAGTTGCAGTATACAACATTTTTTGGTTGTGCTGATGGCAACAGTAAAACCATTAATGATAAAGACAGTGTGGATGACTTAGCTAGCTCATCTCATGTTGATTGGAAAGAGGAATTCAAGAGAGCATATATAGGTAACTCTTTCAGGAGAAACACATATGGAAGGGGATACTGCCAACACTGTGACACCATAGTTTCCTTTAGTACCTTGAGATGTCCCAATGATCATGGTAGAAATAAAAATAAACAAATCAAGCCTCTGTCAATCAACCAGGTTGTTGAATATGTGTTAAATGGATCTTCCGAATTGATTTATTCTTCAGATAGCGATACTGATTCAGATGAAGTTGTGATTTCTGAGTTTTGGGCTCTTCCAAAGTACTTGGGCAGAAGGCAGTCGAGCTTTTGA

Protein sequence

MSDPLERYQKLALTDSLAKSYGYPLACKELSFIVRGAFNKLPKNLQSLIYQHIITAFHLLPEMQTSSAVSAAHLLAQGVEAALPKQKRNSAIVEYKKAMVAHKRRSKAHQEEKVSGQLPQDVLLHIFRFLDIESLVSAGLVCRSWNLAADDEYLWQLQYTTFFGCADGNSKTINDKDSVDDLASSSHVDWKEEFKRAYIGNSFRRNTYGRGYCQHCDTIVSFSTLRCPNDHGRNKNKQIKPLSINQVVEYVLNGSSELIYSSDSDTDSDEVVISEFWALPKYLGRRQSSF

Homology

[Close]

BLAST of Lcy02g000560 vs. ExPASy Swiss-Prot
Match: Q9FLX3 (F-box protein At5g52880 OS=Arabidopsis thaliana OX=3702 GN=At5g52880 PE=2 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 1.4e-55
Identity = 131/287 (45.64%), Postives = 178/287 (62.02%), Query Frame = 0


Query: 5   LERYQKLALTDSLAKSYGYPLACKELSFIVRGAFNKLPKNLQSLIYQHIITAFHLLPEMQ 64
           ++RYQ L + ++ +K+  YP AC ELS I+  A++  PKN+++LI+Q  ++AF LLP++ 
Sbjct: 1   MKRYQNLKVGEAFSKNRIYPFACNELSSILNLAYSLSPKNVKALIFQDTLSAFRLLPDIN 60

Query: 65  TSSAVSAAHLLAQGVEAALPKQKRNSAIVEYKKAMVAHKRRSKAHQEEKVS-GQLPQDVL 124
           TS+AVSAA+LL + VEA LPKQK+N AIVE+K+A VA KRRSK  +EE +    LPQD+L
Sbjct: 61  TSAAVSAANLLLKSVEAVLPKQKKNLAIVEFKQAKVALKRRSKNREEEDIDIPSLPQDIL 120

Query: 125 LHIFRFLDIESLVSAGLVCRSWNLAADDEYLWQLQYTTFFGCADGNSKTINDKDSVDDLA 184
           +HIF FL+I SLVS+  V RSWN A  +  LWQ Q+   F     N K +        + 
Sbjct: 121 IHIFSFLEISSLVSSAQVSRSWNQATHENSLWQSQFDLHF-----NHKVL--------IR 180

Query: 185 SSSHVDWKEEFKRAYI-GNSFRRNTYGRGYCQHCDTIVSFSTLRCPNDHGRNK--NKQIK 244
             S +DW+E FK+AYI  NS      GRGYC +CD+IV    LRC N   R K  NK + 
Sbjct: 181 MQSDIDWREAFKKAYIAANSSEALRSGRGYCSYCDSIVWHENLRCLNKQCRLKSGNKPLD 240

Query: 245 PLSINQVVEYVLNGSSELIYSSDSDTDS-DEVVISEFWAL---PKYL 284
            ++ +QVV Y+L      I SSD +++S DE      W L   P YL
Sbjct: 241 LITTHQVVNYLLG-----IESSDDESESDDEAFPGRLWKLSYVPDYL 269

[Close]

BLAST of Lcy02g000560 vs. ExPASy Swiss-Prot
Match: Q5UPK8 (Putative F-box protein L127 OS=Acanthamoeba polyphaga mimivirus OX=212035 GN=MIMI_L127 PE=4 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 2.9e-05
Identity = 22/47 (46.81%), Postives = 29/47 (61.70%), Query Frame = 0


Query: 118 LPQDVLLHIFRFLDIESLVSAGLVCRSWNLAADDEYLWQLQYTTFFG 165
           L ++++ HIF FLD+ S +    VCR W   +DDE LW L Y  FFG
Sbjct: 5   LSEEMVYHIFCFLDLSSFIKCSRVCRKWRRISDDEKLWNL-YGEFFG 50

[Close]

BLAST of Lcy02g000560 vs. ExPASy Swiss-Prot
Match: Q9QXW2 (F-box/WD repeat-containing protein 5 OS=Mus musculus OX=10090 GN=Fbxw5 PE=1 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 1.5e-04
Identity = 27/81 (33.33%), Postives = 42/81 (51.85%), Query Frame = 0


Query: 118 LPQDVLLHIFRFLDIESLVSAGLVCRSWNLAADDEYLWQLQYTTFFGCADGNSKTINDKD 177
           LP  ++  IF  L    +++AGLVCR W   + DE+LW+ Q+  ++  A         +D
Sbjct: 9   LPDSLVYQIFLSLGPADVLAAGLVCRQWQAVSRDEFLWKEQFYRYYQVA---------RD 68

Query: 178 SVDDLASSSHVDWKEEFKRAY 199
                A++S   W EEF+R Y
Sbjct: 69  VPRHPAATS---WYEEFRRLY 77

[Close]

BLAST of Lcy02g000560 vs. ExPASy Swiss-Prot
Match: Q4KLI9 (F-box/WD repeat-containing protein 5 OS=Rattus norvegicus OX=10116 GN=Fbxw5 PE=2 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 1.5e-04
Identity = 27/81 (33.33%), Postives = 42/81 (51.85%), Query Frame = 0


Query: 118 LPQDVLLHIFRFLDIESLVSAGLVCRSWNLAADDEYLWQLQYTTFFGCADGNSKTINDKD 177
           LP  ++  IF  L    +++AGLVCR W   + DE+LW+ Q+  ++  A         +D
Sbjct: 9   LPDSLVYQIFLSLGPADVLAAGLVCRQWQAVSRDEFLWREQFYRYYQVA---------RD 68

Query: 178 SVDDLASSSHVDWKEEFKRAY 199
                A++S   W EEF+R Y
Sbjct: 69  VPRHPAATS---WYEEFRRLY 77

[Close]

BLAST of Lcy02g000560 vs. ExPASy Swiss-Prot
Match: Q2T9S7 (F-box only protein 7 OS=Bos taurus OX=9913 GN=FBXO7 PE=2 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 2.5e-04
Identity = 28/81 (34.57%), Postives = 43/81 (53.09%), Query Frame = 0


Query: 118 LPQDVLLHIFRFLDIESLVSAGLVCRSWNLAADDEYLWQLQYTTFFGCADGNSKTINDKD 177
           LP ++ L IFR LD+ S++S   VCR   + ++D+ LW+  Y   F   DG   +I  +D
Sbjct: 334 LPLELKLRIFRLLDVRSVLSLSAVCRDLCITSNDQLLWRCLYLRDF--RDG---SIRGRD 393

Query: 178 SVDDLASSSHVDWKEEFKRAY 199
           +          DWKE +K+ Y
Sbjct: 394 T----------DWKELYKKRY 399

[Close]

BLAST of Lcy02g000560 vs. ExPASy TrEMBL
Match: A0A6J1I7M6 (F-box protein At5g52880 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111471558 PE=4 SV=1)

HSP 1 Score: 510.0 bits (1312), Expect = 6.6e-141
Identity = 254/287 (88.50%), Postives = 267/287 (93.03%), Query Frame = 0


Query: 1   MSDPLERYQKLALTDSLAKSYGYPLACKELSFIVRGAFNKLPKNLQSLIYQHIITAFHLL 60
           M+DPLERYQ LALTDSLAKSY YPLACKELSFI RGAFNKLPKNLQSLI+QHIITAFHLL
Sbjct: 1   MTDPLERYQNLALTDSLAKSYSYPLACKELSFITRGAFNKLPKNLQSLIFQHIITAFHLL 60

Query: 61  PEMQTSSAVSAAHLLAQGVEAALPKQKRNSAIVEYKKAMVAHKRRSKAHQEEKVSGQLPQ 120
           PEMQTSSAVSAAHLLAQGVEA+LPKQKRNSAIVE+KKAMVAHKRRSKA QE K S QLPQ
Sbjct: 61  PEMQTSSAVSAAHLLAQGVEASLPKQKRNSAIVEFKKAMVAHKRRSKARQEVKGSSQLPQ 120

Query: 121 DVLLHIFRFLDIESLVSAGLVCRSWNLAADDEYLWQLQYTTFFGCADGNSKTINDKDSVD 180
           DVLLHIFRFLDIESLVSAGLVCRSW+ AADDEYLWQ QYTTFFGC+D   + IND+DSVD
Sbjct: 121 DVLLHIFRFLDIESLVSAGLVCRSWSAAADDEYLWQFQYTTFFGCSD---EPINDEDSVD 180

Query: 181 DLASSSHVDWKEEFKRAYIGNSFRRNTYGRGYCQHCDTIVSFSTLRCPNDHGRNKNKQIK 240
            LAS+ HVDWKE FKRAY+GNS  RN YGRGYC+HCDTIVSFSTLRCPNDHGRNKN+QIK
Sbjct: 181 GLASTPHVDWKEAFKRAYVGNSLWRNRYGRGYCKHCDTIVSFSTLRCPNDHGRNKNRQIK 240

Query: 241 PLSINQVVEYVLNGSSELIYSSDSDTDSDEVVISEFWALPKYLGRRQ 288
           PLSINQVVEYVLNG SELIYSSDSDTDSDEVVISEFWALPKYLGRR+
Sbjct: 241 PLSINQVVEYVLNGISELIYSSDSDTDSDEVVISEFWALPKYLGRRR 284

[Close]

BLAST of Lcy02g000560 vs. ExPASy TrEMBL
Match: A0A6J1E2E9 (F-box protein At5g52880 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430216 PE=4 SV=1)

HSP 1 Score: 507.3 bits (1305), Expect = 4.3e-140
Identity = 254/287 (88.50%), Postives = 265/287 (92.33%), Query Frame = 0


Query: 1   MSDPLERYQKLALTDSLAKSYGYPLACKELSFIVRGAFNKLPKNLQSLIYQHIITAFHLL 60
           M+DPLERYQ LALTDSLAKSY YPLACKELSFI RGAFNKLPKNLQSLI+QHIITAFHLL
Sbjct: 1   MTDPLERYQNLALTDSLAKSYSYPLACKELSFITRGAFNKLPKNLQSLIFQHIITAFHLL 60

Query: 61  PEMQTSSAVSAAHLLAQGVEAALPKQKRNSAIVEYKKAMVAHKRRSKAHQEEKVSGQLPQ 120
           PEMQTSSAVSAAHLLAQGVEA+LPKQKRNSAIVE+KKAMVAHKRRSKA QE K S QLPQ
Sbjct: 61  PEMQTSSAVSAAHLLAQGVEASLPKQKRNSAIVEFKKAMVAHKRRSKARQEVKGSSQLPQ 120

Query: 121 DVLLHIFRFLDIESLVSAGLVCRSWNLAADDEYLWQLQYTTFFGCADGNSKTINDKDSVD 180
           DVLLHIFRFLDIESLVSAGLVCRSWN AADDEYLWQ QYTTFFGC+D   + INDKDSVD
Sbjct: 121 DVLLHIFRFLDIESLVSAGLVCRSWNAAADDEYLWQFQYTTFFGCSD---EPINDKDSVD 180

Query: 181 DLASSSHVDWKEEFKRAYIGNSFRRNTYGRGYCQHCDTIVSFSTLRCPNDHGRNKNKQIK 240
            LAS+ HVDWKE FK AY+GNS  RN  GRGYC+HCDTIVSFSTLRCPNDHGRNKNKQIK
Sbjct: 181 GLASTPHVDWKEAFKGAYVGNSLWRNRSGRGYCKHCDTIVSFSTLRCPNDHGRNKNKQIK 240

Query: 241 PLSINQVVEYVLNGSSELIYSSDSDTDSDEVVISEFWALPKYLGRRQ 288
           PLSINQVVEYVL G+SELIYSSDSDTDSDEVVISEFWALPKYLGRR+
Sbjct: 241 PLSINQVVEYVLTGTSELIYSSDSDTDSDEVVISEFWALPKYLGRRR 284

[Close]

BLAST of Lcy02g000560 vs. ExPASy TrEMBL
Match: A0A1S3AUV1 (F-box protein At5g52880 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103482926 PE=4 SV=1)

HSP 1 Score: 502.3 bits (1292), Expect = 1.4e-138
Identity = 252/291 (86.60%), Postives = 263/291 (90.38%), Query Frame = 0


Query: 1   MSDPLERYQKLALTDSLAKSYGYPLACKELSFIVRGAFNKLPKNLQSLIYQHIITAFHLL 60
           MS+PLERY KL+L DSL KSY YPLACKELSF++RGAF KLPKNLQSLIYQHIITAFHLL
Sbjct: 1   MSNPLERYHKLSLIDSLGKSYSYPLACKELSFLIRGAFIKLPKNLQSLIYQHIITAFHLL 60

Query: 61  PEMQTSSAVSAAHLLAQGVEAALPKQKRNSAIVEYKKAMVAHKRRSKAHQEEKVSGQLPQ 120
           PEMQTSSA SAA LLAQ VEAALPKQKRNS IVEYKKAMV HKRRSKAHQEEK S QLPQ
Sbjct: 61  PEMQTSSAASAARLLAQAVEAALPKQKRNSVIVEYKKAMVVHKRRSKAHQEEKGSCQLPQ 120

Query: 121 DVLLHIFRFLDIESLVSAGLVCRSWNLAADDEYLWQLQYTTFFGCADGNSKTINDKDSVD 180
           DVLLHIFRFLD++SL SAGLVCRSWN+AADDEYLWQLQYTTFFGC D NSK INDKDS D
Sbjct: 121 DVLLHIFRFLDVQSLGSAGLVCRSWNVAADDEYLWQLQYTTFFGCPDDNSKPINDKDSED 180

Query: 181 DLASSS--HVDWKEEFKRAYIGNSFRRNTYGRGYCQHCDTIVSFSTLRCPNDHGRNKNKQ 240
           D ASSS  HVDWKEEFK+AY+GNS  RNT GRGYC+HCDTIVSFSTLRC NDHGRNKNKQ
Sbjct: 181 DFASSSTPHVDWKEEFKKAYVGNSLGRNTCGRGYCKHCDTIVSFSTLRCTNDHGRNKNKQ 240

Query: 241 IKPLSINQVVEYVLNGSSELIYSSDSDTDSDEVVISEFWALPKYLGRRQSS 290
           IKPLSINQVVEYVLNGSSELIYSSDS+TDSDE VISEFWALPKYLG R  S
Sbjct: 241 IKPLSINQVVEYVLNGSSELIYSSDSETDSDEDVISEFWALPKYLGSRGMS 291

[Close]

BLAST of Lcy02g000560 vs. ExPASy TrEMBL
Match: A0A0A0KNE5 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G139890 PE=4 SV=1)

HSP 1 Score: 489.2 bits (1258), Expect = 1.2e-134
Identity = 242/286 (84.62%), Postives = 261/286 (91.26%), Query Frame = 0


Query: 1   MSDPLERYQKLALTDSLAKSYGYPLACKELSFIVRGAFNKLPKNLQSLIYQHIITAFHLL 60
           MS+PLERY KL L D LAKSY YPLACKELSF++RGAF KLPKNLQSLIY+HIITAFHLL
Sbjct: 1   MSNPLERYHKLCLMDFLAKSYSYPLACKELSFLIRGAFIKLPKNLQSLIYEHIITAFHLL 60

Query: 61  PEMQTSSAVSAAHLLAQGVEAALPKQKRNSAIVEYKKAMVAHKRRSKAHQEEKVSGQLPQ 120
           PEMQTSSA SAA LLA+ VEAALPKQKRNS IVE+KKAMV HKRR+KAHQEEK S QLPQ
Sbjct: 61  PEMQTSSAASAARLLARAVEAALPKQKRNSVIVEFKKAMVVHKRRTKAHQEEKGSCQLPQ 120

Query: 121 DVLLHIFRFLDIESLVSAGLVCRSWNLAADDEYLWQLQYTTFFGCADGNSKTINDKDSVD 180
           DVLLHIFRF+D++SLVSAGLVCRSWN+AA+DEYLWQLQYTTFF C+D NSK+INDKDS D
Sbjct: 121 DVLLHIFRFIDVQSLVSAGLVCRSWNVAAEDEYLWQLQYTTFFVCSDDNSKSINDKDSED 180

Query: 181 DLASSS--HVDWKEEFKRAYIGNSFRRNTYGRGYCQHCDTIVSFSTLRCPNDHGRNKNKQ 240
             ASSS   VDWKEEFK+AY+GNS  RNTYGRGYC+HCDTIVSFSTLRCPNDHGRNKN Q
Sbjct: 181 GFASSSTPRVDWKEEFKKAYVGNSLGRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNTQ 240

Query: 241 IKPLSINQVVEYVLNGSSELIYSSDSDTDSDEVVISEFWALPKYLG 285
           IKPLSINQVVEYVLNG+SELIYSSDS+TDSDE VISEFWALPKYLG
Sbjct: 241 IKPLSINQVVEYVLNGASELIYSSDSETDSDEDVISEFWALPKYLG 286

[Close]

BLAST of Lcy02g000560 vs. ExPASy TrEMBL
Match: A0A1S3ATY4 (F-box protein At5g52880 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103482926 PE=4 SV=1)

HSP 1 Score: 433.7 bits (1114), Expect = 6.0e-118
Identity = 215/253 (84.98%), Postives = 228/253 (90.12%), Query Frame = 0


Query: 1   MSDPLERYQKLALTDSLAKSYGYPLACKELSFIVRGAFNKLPKNLQSLIYQHIITAFHLL 60
           MS+PLERY KL+L DSL KSY YPLACKELSF++RGAF KLPKNLQSLIYQHIITAFHLL
Sbjct: 1   MSNPLERYHKLSLIDSLGKSYSYPLACKELSFLIRGAFIKLPKNLQSLIYQHIITAFHLL 60

Query: 61  PEMQTSSAVSAAHLLAQGVEAALPKQKRNSAIVEYKKAMVAHKRRSKAHQEEKVSGQLPQ 120
           PEMQTSSA SAA LLAQ VEAALPKQKRNS IVEYKKAMV HKRRSKAHQEEK S QLPQ
Sbjct: 61  PEMQTSSAASAARLLAQAVEAALPKQKRNSVIVEYKKAMVVHKRRSKAHQEEKGSCQLPQ 120

Query: 121 DVLLHIFRFLDIESLVSAGLVCRSWNLAADDEYLWQLQYTTFFGCADGNSKTINDKDSVD 180
           DVLLHIFRFLD++SL SAGLVCRSWN+AADDEYLWQLQYTTFFGC D NSK INDKDS D
Sbjct: 121 DVLLHIFRFLDVQSLGSAGLVCRSWNVAADDEYLWQLQYTTFFGCPDDNSKPINDKDSED 180

Query: 181 DLASSS--HVDWKEEFKRAYIGNSFRRNTYGRGYCQHCDTIVSFSTLRCPNDHGRNKNKQ 240
           D ASSS  HVDWKEEFK+AY+GNS  RNT GRGYC+HCDTIVSFSTLRC NDHGRNKNKQ
Sbjct: 181 DFASSSTPHVDWKEEFKKAYVGNSLGRNTCGRGYCKHCDTIVSFSTLRCTNDHGRNKNKQ 240

Query: 241 IKPLSINQVVEYV 252
           IKPLSINQ+V+ +
Sbjct: 241 IKPLSINQIVKLI 253

[Close]

BLAST of Lcy02g000560 vs. NCBI nr
Match: XP_038874449.1 (F-box protein At5g52880 isoform X1 [Benincasa hispida])

HSP 1 Score: 524.6 bits (1350), Expect = 5.3e-145
Identity = 258/287 (89.90%), Postives = 270/287 (94.08%), Query Frame = 0


Query: 1   MSDPLERYQKLALTDSLAKSYGYPLACKELSFIVRGAFNKLPKNLQSLIYQHIITAFHLL 60
           MSDPLERYQ LALTDSLAKSY YPLACKELSF++RGAFNKLPKNLQSLIYQHIITAFHLL
Sbjct: 1   MSDPLERYQNLALTDSLAKSYSYPLACKELSFLIRGAFNKLPKNLQSLIYQHIITAFHLL 60

Query: 61  PEMQTSSAVSAAHLLAQGVEAALPKQKRNSAIVEYKKAMVAHKRRSKAHQEEKVSGQLPQ 120
           PEMQTSSA SAAHLLAQGVEAALPKQKRNSAIVE+KKAMVAHKRRSKAHQEEK S QLPQ
Sbjct: 61  PEMQTSSAASAAHLLAQGVEAALPKQKRNSAIVEFKKAMVAHKRRSKAHQEEKGSAQLPQ 120

Query: 121 DVLLHIFRFLDIESLVSAGLVCRSWNLAADDEYLWQLQYTTFFGCADGNSKTINDKDSVD 180
           DVLLHIFRFLD++SLVSAGLVCRSWN+AADDEYLWQLQYT FFGC+D NSK INDKDSVD
Sbjct: 121 DVLLHIFRFLDVQSLVSAGLVCRSWNVAADDEYLWQLQYTKFFGCSDDNSKPINDKDSVD 180

Query: 181 DLASSSHVDWKEEFKRAYIGNSFRRNTYGRGYCQHCDTIVSFSTLRCPNDHGRNKNKQIK 240
           D AS+ HVDWKEEFK AYI NS RRNT GRGYC+HCDTIVS STLRCPNDHGRNKNKQIK
Sbjct: 181 DFASARHVDWKEEFKSAYIVNSLRRNTNGRGYCRHCDTIVSSSTLRCPNDHGRNKNKQIK 240

Query: 241 PLSINQVVEYVLNGSSELIYSSDSDTDSDEVVISEFWALPKYLGRRQ 288
           PLSINQVVEYVLNGS+ELIYSSDS+TDSDEVVISEFWA PKYLG R+
Sbjct: 241 PLSINQVVEYVLNGSTELIYSSDSETDSDEVVISEFWAFPKYLGSRR 287

[Close]

BLAST of Lcy02g000560 vs. NCBI nr
Match: XP_022973056.1 (F-box protein At5g52880 isoform X1 [Cucurbita maxima])

HSP 1 Score: 510.0 bits (1312), Expect = 1.4e-140
Identity = 254/287 (88.50%), Postives = 267/287 (93.03%), Query Frame = 0


Query: 1   MSDPLERYQKLALTDSLAKSYGYPLACKELSFIVRGAFNKLPKNLQSLIYQHIITAFHLL 60
           M+DPLERYQ LALTDSLAKSY YPLACKELSFI RGAFNKLPKNLQSLI+QHIITAFHLL
Sbjct: 1   MTDPLERYQNLALTDSLAKSYSYPLACKELSFITRGAFNKLPKNLQSLIFQHIITAFHLL 60

Query: 61  PEMQTSSAVSAAHLLAQGVEAALPKQKRNSAIVEYKKAMVAHKRRSKAHQEEKVSGQLPQ 120
           PEMQTSSAVSAAHLLAQGVEA+LPKQKRNSAIVE+KKAMVAHKRRSKA QE K S QLPQ
Sbjct: 61  PEMQTSSAVSAAHLLAQGVEASLPKQKRNSAIVEFKKAMVAHKRRSKARQEVKGSSQLPQ 120

Query: 121 DVLLHIFRFLDIESLVSAGLVCRSWNLAADDEYLWQLQYTTFFGCADGNSKTINDKDSVD 180
           DVLLHIFRFLDIESLVSAGLVCRSW+ AADDEYLWQ QYTTFFGC+D   + IND+DSVD
Sbjct: 121 DVLLHIFRFLDIESLVSAGLVCRSWSAAADDEYLWQFQYTTFFGCSD---EPINDEDSVD 180

Query: 181 DLASSSHVDWKEEFKRAYIGNSFRRNTYGRGYCQHCDTIVSFSTLRCPNDHGRNKNKQIK 240
            LAS+ HVDWKE FKRAY+GNS  RN YGRGYC+HCDTIVSFSTLRCPNDHGRNKN+QIK
Sbjct: 181 GLASTPHVDWKEAFKRAYVGNSLWRNRYGRGYCKHCDTIVSFSTLRCPNDHGRNKNRQIK 240

Query: 241 PLSINQVVEYVLNGSSELIYSSDSDTDSDEVVISEFWALPKYLGRRQ 288
           PLSINQVVEYVLNG SELIYSSDSDTDSDEVVISEFWALPKYLGRR+
Sbjct: 241 PLSINQVVEYVLNGISELIYSSDSDTDSDEVVISEFWALPKYLGRRR 284

[Close]

BLAST of Lcy02g000560 vs. NCBI nr
Match: XP_022922152.1 (F-box protein At5g52880 isoform X1 [Cucurbita moschata])

HSP 1 Score: 507.3 bits (1305), Expect = 8.8e-140
Identity = 254/287 (88.50%), Postives = 265/287 (92.33%), Query Frame = 0


Query: 1   MSDPLERYQKLALTDSLAKSYGYPLACKELSFIVRGAFNKLPKNLQSLIYQHIITAFHLL 60
           M+DPLERYQ LALTDSLAKSY YPLACKELSFI RGAFNKLPKNLQSLI+QHIITAFHLL
Sbjct: 1   MTDPLERYQNLALTDSLAKSYSYPLACKELSFITRGAFNKLPKNLQSLIFQHIITAFHLL 60

Query: 61  PEMQTSSAVSAAHLLAQGVEAALPKQKRNSAIVEYKKAMVAHKRRSKAHQEEKVSGQLPQ 120
           PEMQTSSAVSAAHLLAQGVEA+LPKQKRNSAIVE+KKAMVAHKRRSKA QE K S QLPQ
Sbjct: 61  PEMQTSSAVSAAHLLAQGVEASLPKQKRNSAIVEFKKAMVAHKRRSKARQEVKGSSQLPQ 120

Query: 121 DVLLHIFRFLDIESLVSAGLVCRSWNLAADDEYLWQLQYTTFFGCADGNSKTINDKDSVD 180
           DVLLHIFRFLDIESLVSAGLVCRSWN AADDEYLWQ QYTTFFGC+D   + INDKDSVD
Sbjct: 121 DVLLHIFRFLDIESLVSAGLVCRSWNAAADDEYLWQFQYTTFFGCSD---EPINDKDSVD 180

Query: 181 DLASSSHVDWKEEFKRAYIGNSFRRNTYGRGYCQHCDTIVSFSTLRCPNDHGRNKNKQIK 240
            LAS+ HVDWKE FK AY+GNS  RN  GRGYC+HCDTIVSFSTLRCPNDHGRNKNKQIK
Sbjct: 181 GLASTPHVDWKEAFKGAYVGNSLWRNRSGRGYCKHCDTIVSFSTLRCPNDHGRNKNKQIK 240

Query: 241 PLSINQVVEYVLNGSSELIYSSDSDTDSDEVVISEFWALPKYLGRRQ 288
           PLSINQVVEYVL G+SELIYSSDSDTDSDEVVISEFWALPKYLGRR+
Sbjct: 241 PLSINQVVEYVLTGTSELIYSSDSDTDSDEVVISEFWALPKYLGRRR 284

[Close]

BLAST of Lcy02g000560 vs. NCBI nr
Match: KAG7016844.1 (SPCC24B10.10c [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 507.3 bits (1305), Expect = 8.8e-140
Identity = 254/287 (88.50%), Postives = 265/287 (92.33%), Query Frame = 0


Query: 1    MSDPLERYQKLALTDSLAKSYGYPLACKELSFIVRGAFNKLPKNLQSLIYQHIITAFHLL 60
            M+DPLERYQ LALTDSLAKSY YPLACKELSFI RGAFNKLPKNLQSLI+QHIITAFHLL
Sbjct: 825  MTDPLERYQNLALTDSLAKSYSYPLACKELSFITRGAFNKLPKNLQSLIFQHIITAFHLL 884

Query: 61   PEMQTSSAVSAAHLLAQGVEAALPKQKRNSAIVEYKKAMVAHKRRSKAHQEEKVSGQLPQ 120
            PEMQTSSAVSAAHLLAQGVEA+LPKQKRNSAIVE+KKAMVAHKRRSKA QE K S QLPQ
Sbjct: 885  PEMQTSSAVSAAHLLAQGVEASLPKQKRNSAIVEFKKAMVAHKRRSKARQEVKGSSQLPQ 944

Query: 121  DVLLHIFRFLDIESLVSAGLVCRSWNLAADDEYLWQLQYTTFFGCADGNSKTINDKDSVD 180
            DVLLHIFRFLDIESLVSAGLVCRSWN AADDEYLWQ QYTTFFGC+D   + INDKDSVD
Sbjct: 945  DVLLHIFRFLDIESLVSAGLVCRSWNAAADDEYLWQFQYTTFFGCSD---EPINDKDSVD 1004

Query: 181  DLASSSHVDWKEEFKRAYIGNSFRRNTYGRGYCQHCDTIVSFSTLRCPNDHGRNKNKQIK 240
             LAS+ HVDWKE FK AY+GNS  RN  GRGYC+HCDTIVSFSTLRCPNDHGRNKNKQIK
Sbjct: 1005 GLASTPHVDWKEAFKGAYVGNSLWRNRSGRGYCKHCDTIVSFSTLRCPNDHGRNKNKQIK 1064

Query: 241  PLSINQVVEYVLNGSSELIYSSDSDTDSDEVVISEFWALPKYLGRRQ 288
            PLSINQVVEYVL G+SELIYSSDSDTDSDEVVISEFWALPKYLGRR+
Sbjct: 1065 PLSINQVVEYVLTGTSELIYSSDSDTDSDEVVISEFWALPKYLGRRR 1108

[Close]

BLAST of Lcy02g000560 vs. NCBI nr
Match: KAG6579359.1 (F-box protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 505.0 bits (1299), Expect = 4.4e-139
Identity = 253/285 (88.77%), Postives = 263/285 (92.28%), Query Frame = 0


Query: 3    DPLERYQKLALTDSLAKSYGYPLACKELSFIVRGAFNKLPKNLQSLIYQHIITAFHLLPE 62
            DPLERYQ LALTDSLAKSY YPLACKELSFI RGAFNKLPKNLQSLI+QHIITAFHLLPE
Sbjct: 794  DPLERYQNLALTDSLAKSYSYPLACKELSFITRGAFNKLPKNLQSLIFQHIITAFHLLPE 853

Query: 63   MQTSSAVSAAHLLAQGVEAALPKQKRNSAIVEYKKAMVAHKRRSKAHQEEKVSGQLPQDV 122
            MQTSSAVSAAHLLAQGVEA+LPKQKRNSAIVE+KKAMVAHKRRSKA QE K S QLPQDV
Sbjct: 854  MQTSSAVSAAHLLAQGVEASLPKQKRNSAIVEFKKAMVAHKRRSKARQEVKGSSQLPQDV 913

Query: 123  LLHIFRFLDIESLVSAGLVCRSWNLAADDEYLWQLQYTTFFGCADGNSKTINDKDSVDDL 182
            LLHIFRFLDIESLVSAGLVCRSWN AADDEYLWQ QYTTFFGC+D   + INDKDSVD L
Sbjct: 914  LLHIFRFLDIESLVSAGLVCRSWNAAADDEYLWQFQYTTFFGCSD---EPINDKDSVDGL 973

Query: 183  ASSSHVDWKEEFKRAYIGNSFRRNTYGRGYCQHCDTIVSFSTLRCPNDHGRNKNKQIKPL 242
            AS+ HVDWKE FK AY+GNS  RN  GRGYC+HCDTIVSFSTLRCPNDHGRNKNKQIKPL
Sbjct: 974  ASTPHVDWKEAFKGAYVGNSLWRNRSGRGYCKHCDTIVSFSTLRCPNDHGRNKNKQIKPL 1033

Query: 243  SINQVVEYVLNGSSELIYSSDSDTDSDEVVISEFWALPKYLGRRQ 288
            SINQVVEYVL G+SELIYSSDSDTDSDEVVISEFWALPKYLGRR+
Sbjct: 1034 SINQVVEYVLTGTSELIYSSDSDTDSDEVVISEFWALPKYLGRRR 1075

[Close]

BLAST of Lcy02g000560 vs. TAIR 10
Match: AT5G52880.1 (F-box family protein )

HSP 1 Score: 218.0 bits (554), Expect = 9.9e-57
Identity = 131/287 (45.64%), Postives = 178/287 (62.02%), Query Frame = 0


Query: 5   LERYQKLALTDSLAKSYGYPLACKELSFIVRGAFNKLPKNLQSLIYQHIITAFHLLPEMQ 64
           ++RYQ L + ++ +K+  YP AC ELS I+  A++  PKN+++LI+Q  ++AF LLP++ 
Sbjct: 1   MKRYQNLKVGEAFSKNRIYPFACNELSSILNLAYSLSPKNVKALIFQDTLSAFRLLPDIN 60

Query: 65  TSSAVSAAHLLAQGVEAALPKQKRNSAIVEYKKAMVAHKRRSKAHQEEKVS-GQLPQDVL 124
           TS+AVSAA+LL + VEA LPKQK+N AIVE+K+A VA KRRSK  +EE +    LPQD+L
Sbjct: 61  TSAAVSAANLLLKSVEAVLPKQKKNLAIVEFKQAKVALKRRSKNREEEDIDIPSLPQDIL 120

Query: 125 LHIFRFLDIESLVSAGLVCRSWNLAADDEYLWQLQYTTFFGCADGNSKTINDKDSVDDLA 184
           +HIF FL+I SLVS+  V RSWN A  +  LWQ Q+   F     N K +        + 
Sbjct: 121 IHIFSFLEISSLVSSAQVSRSWNQATHENSLWQSQFDLHF-----NHKVL--------IR 180

Query: 185 SSSHVDWKEEFKRAYI-GNSFRRNTYGRGYCQHCDTIVSFSTLRCPNDHGRNK--NKQIK 244
             S +DW+E FK+AYI  NS      GRGYC +CD+IV    LRC N   R K  NK + 
Sbjct: 181 MQSDIDWREAFKKAYIAANSSEALRSGRGYCSYCDSIVWHENLRCLNKQCRLKSGNKPLD 240

Query: 245 PLSINQVVEYVLNGSSELIYSSDSDTDS-DEVVISEFWAL---PKYL 284
            ++ +QVV Y+L      I SSD +++S DE      W L   P YL
Sbjct: 241 LITTHQVVNYLLG-----IESSDDESESDDEAFPGRLWKLSYVPDYL 269

[Close]

BLAST of Lcy02g000560 vs. TAIR 10
Match: AT5G45360.1 (F-box family protein )

HSP 1 Score: 47.4 bits (111), Expect = 2.3e-05
Identity = 23/54 (42.59%), Postives = 30/54 (55.56%), Query Frame = 0


Query: 111 EEKVSGQLPQDVLLHIFRFLDIESLVSAGLVCRSWNLAADDEYLWQLQYTTFFG 165
           E  V   +P ++  HI +FL  E LVS  LVC+  N AA DE LW+  Y   +G
Sbjct: 67  ESGVFTNVPTELFRHILKFLSSEDLVSCSLVCKFLNFAAADESLWRRLYCIRWG 120

The following BLAST results are available for this feature:

BLAST of Lcy02g000560 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FLX3	1.4e-55	45.64	F-box protein At5g52880 OS=Arabidopsis thaliana OX=3702 GN=At5g52880 PE=2 SV=1	[more]
Q5UPK8	2.9e-05	46.81	Putative F-box protein L127 OS=Acanthamoeba polyphaga mimivirus OX=212035 GN=MIM...	[more]
Q9QXW2	1.5e-04	33.33	F-box/WD repeat-containing protein 5 OS=Mus musculus OX=10090 GN=Fbxw5 PE=1 SV=1	[more]
Q4KLI9	1.5e-04	33.33	F-box/WD repeat-containing protein 5 OS=Rattus norvegicus OX=10116 GN=Fbxw5 PE=2...	[more]
Q2T9S7	2.5e-04	34.57	F-box only protein 7 OS=Bos taurus OX=9913 GN=FBXO7 PE=2 SV=1	[more]

BLAST of Lcy02g000560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I7M6	6.6e-141	88.50	F-box protein At5g52880 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111471558 P...	[more]
A0A6J1E2E9	4.3e-140	88.50	F-box protein At5g52880 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430216...	[more]
A0A1S3AUV1	1.4e-138	86.60	F-box protein At5g52880 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103482926 PE=4 ...	[more]
A0A0A0KNE5	1.2e-134	84.62	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G139890 PE=4 ...	[more]
A0A1S3ATY4	6.0e-118	84.98	F-box protein At5g52880 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103482926 PE=4 ...	[more]

BLAST of Lcy02g000560 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038874449.1	5.3e-145	89.90	F-box protein At5g52880 isoform X1 [Benincasa hispida]	[more]
XP_022973056.1	1.4e-140	88.50	F-box protein At5g52880 isoform X1 [Cucurbita maxima]	[more]
XP_022922152.1	8.8e-140	88.50	F-box protein At5g52880 isoform X1 [Cucurbita moschata]	[more]
KAG7016844.1	8.8e-140	88.50	SPCC24B10.10c [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6579359.1	4.4e-139	88.77	F-box protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Lcy02g000560 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G52880.1	9.9e-57	45.64	F-box family protein	[more]
AT5G45360.1	2.3e-05	42.59	F-box family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	SMART	SM00256	fbox_2	coord: 118..158 e-value: 8.1E-9 score: 45.3
IPR001810	F-box domain	PFAM	PF12937	F-box-like	coord: 117..159 e-value: 1.7E-13 score: 50.2
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 112..158 score: 11.564033
None	No IPR available	GENE3D	1.20.1280.50		coord: 99..205 e-value: 2.5E-15 score: 58.1
None	No IPR available	PANTHER	PTHR47744	OS05G0526300 PROTEIN	coord: 1..283
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 117..198

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy02g000560.1	Lcy02g000560.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding