Lcy01g018340 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy01g018340
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Gibberellin-regulated family protein
Location	Chr01: 39876992 .. 39877586 (-)
RNA-Seq Expression	Lcy01g018340
Synteny	Lcy01g018340

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTCGATTTCACTTTCATTTAATTCCCACCCCCTGAAACCAACACAAATATTTCACTCTACCAGTACCACCTACCCCAAAACTCACCGCTTTAAATACCCCCTTCAAAATCCCACAACTTTCAACTTTCCCAACCTGTTTGTTTCCCGAGAAAATGAAGTTCCTTCATCTTCTTACTTGGCTGCTCGTTCTCACCTCCTTCCTCCAGCTTGTTCTGGCCGGCTCAGGTAAGAAAACGATATCATACCATTGTGGAAATATCGAACCGTCTGAGAATGACTGACATTTTTGTGTGTTACGTGTGAAAGGTTTTTGTGGGTCGAAATGCAAAAATAGATGTGCGAAAGCTGGGGTGCAGGATCGGTGCATGAAGTACTGTGGGATATGCTGCGAGAAATGCCGGTGTGTGCCCTCTGGGACTTATGGGAATAAGCATGAGTGCCCTTGCTATGGGCAGATGAAGAACTCCAAGGGCAAGTCCAAGTGTCCTTGAAGCCCTTCCTGGCTTTTTCTCTTGCTGTGTGTTGTATAATCTAGCTATCTATCTTGTTGATTTTCTTCACTCAAGTTTCTTTTTTTTTTTTTTTTTTTTTTTG

mRNA sequence

GTTCGATTTCACTTTCATTTAATTCCCACCCCCTGAAACCAACACAAATATTTCACTCTACCAGTACCACCTACCCCAAAACTCACCGCTTTAAATACCCCCTTCAAAATCCCACAACTTTCAACTTTCCCAACCTGTTTGTTTCCCGAGAAAATGAAGTTCCTTCATCTTCTTACTTGGCTGCTCGTTCTCACCTCCTTCCTCCAGCTTGTTCTGGCCGGCTCAGGTTTTTGTGGGTCGAAATGCAAAAATAGATGTGCGAAAGCTGGGGTGCAGGATCGGTGCATGAAGTACTGTGGGATATGCTGCGAGAAATGCCGGTGTGTGCCCTCTGGGACTTATGGGAATAAGCATGAGTGCCCTTGCTATGGGCAGATGAAGAACTCCAAGGGCAAGTCCAAGTGTCCTTGAAGCCCTTCCTGGCTTTTTCTCTTGCTGTGTGTTGTATAATCTAGCTATCTATCTTGTTGATTTTCTTCACTCAAGTTTCTTTTTTTTTTTTTTTTTTTTTTTG

Coding sequence (CDS)

ATGAAGTTCCTTCATCTTCTTACTTGGCTGCTCGTTCTCACCTCCTTCCTCCAGCTTGTTCTGGCCGGCTCAGGTTTTTGTGGGTCGAAATGCAAAAATAGATGTGCGAAAGCTGGGGTGCAGGATCGGTGCATGAAGTACTGTGGGATATGCTGCGAGAAATGCCGGTGTGTGCCCTCTGGGACTTATGGGAATAAGCATGAGTGCCCTTGCTATGGGCAGATGAAGAACTCCAAGGGCAAGTCCAAGTGTCCTTGA

Protein sequence

MKFLHLLTWLLVLTSFLQLVLAGSGFCGSKCKNRCAKAGVQDRCMKYCGICCEKCRCVPSGTYGNKHECPCYGQMKNSKGKSKCP

Homology

[Close]

BLAST of Lcy01g018340 vs. ExPASy Swiss-Prot
Match: Q948Z4 (Snakin-1 OS=Solanum tuberosum OX=4113 GN=SN1 PE=1 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 5.0e-30
Identity = 57/80 (71.25%), Postives = 66/80 (82.50%), Query Frame = 0


Query: 6  LLTWLLVLTSFLQLVLAGSGFCGSKCKNRCAKAGVQDRCMKYCGICCEKCRCVPSGTYGN 65
          LL  L++  S +Q  +AGS FC SKCK RC+KAG+ DRC+KYCGICCE+C+CVPSGTYGN
Sbjct: 9  LLVTLVITPSLIQTTMAGSSFCDSKCKLRCSKAGLADRCLKYCGICCEECKCVPSGTYGN 68

Query: 66 KHECPCYGQMKNSKGKSKCP 86
          KHECPCY   KNSKGKSKCP
Sbjct: 69 KHECPCYRDKKNSKGKSKCP 88

[Close]

BLAST of Lcy01g018340 vs. ExPASy Swiss-Prot
Match: P86888 (Peamaclein OS=Prunus persica OX=3760 PE=1 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 2.9e-25
Identity = 48/63 (76.19%), Postives = 52/63 (82.54%), Query Frame = 0


Query: 23 GSGFCGSKCKNRCAKAGVQDRCMKYCGICCEKCRCVPSGTYGNKHECPCYGQMKNSKGKS 82
          GS FC SKC  RC+KAG Q+RC+KYCGICCEKC CVPSGTYGNK ECPCY  +KNSKG  
Sbjct: 1  GSSFCDSKCGVRCSKAGYQERCLKYCGICCEKCHCVPSGTYGNKDECPCYRDLKNSKGNP 60

Query: 83 KCP 86
          KCP
Sbjct: 61 KCP 63

[Close]

BLAST of Lcy01g018340 vs. ExPASy Swiss-Prot
Match: Q8LFM2 (Gibberellin-regulated protein 10 OS=Arabidopsis thaliana OX=3702 GN=GASA10 PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 4.1e-24
Identity = 54/81 (66.67%), Postives = 59/81 (72.84%), Query Frame = 0


Query: 6  LLTWLLVLTSFLQLVLAGSGFCGSKCKNRCAKAGVQDRCMKYCGICCEKCR-CVPSGTYG 65
          L+  LL+ +S   L  A S  CG KC  RC+KAG QDRC+KYC ICCEKC  CVPSGTYG
Sbjct: 9  LIISLLITSSLFILSTADSSPCGGKCNVRCSKAGRQDRCLKYCNICCEKCNYCVPSGTYG 68

Query: 66 NKHECPCYGQMKNSKGKSKCP 86
          NK ECPCY  MKNSKG SKCP
Sbjct: 69 NKDECPCYRDMKNSKGTSKCP 89

[Close]

BLAST of Lcy01g018340 vs. ExPASy Swiss-Prot
Match: O80641 (Gibberellin-regulated protein 8 OS=Arabidopsis thaliana OX=3702 GN=At2g39540 PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.0e-22
Identity = 45/75 (60.00%), Postives = 55/75 (73.33%), Query Frame = 0


Query: 11 LVLTSFLQLVLAGSGFCGSKCKNRCAKAGVQDRCMKYCGICCEKCRCVPSGTYGNKHECP 70
          L+LTS   ++ +    CG KC  RC+KAG  + C+KYC ICC+KC CVPSGT+G+K ECP
Sbjct: 13 LLLTSSFSVLSSADSSCGGKCNVRCSKAGQHEECLKYCNICCQKCNCVPSGTFGHKDECP 72

Query: 71 CYGQMKNSKGKSKCP 86
          CY  MKNSKG SKCP
Sbjct: 73 CYRDMKNSKGGSKCP 87

[Close]

BLAST of Lcy01g018340 vs. ExPASy Swiss-Prot
Match: O82328 (Gibberellin-regulated protein 7 OS=Arabidopsis thaliana OX=3702 GN=GASA7 PE=3 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 2.5e-21
Identity = 40/60 (66.67%), Postives = 49/60 (81.67%), Query Frame = 0


Query: 26  FCGSKCKNRCAKAGVQDRCMKYCGICCEKCRCVPSGTYGNKHECPCYGQMKNSKGKSKCP 85
           +CG KC+ RC +AG++DRC+KYCGICC+ C+CVPSGTYGNKHEC CY    +SKG  KCP
Sbjct: 49  WCGQKCEGRCKEAGMKDRCLKYCGICCKDCQCVPSGTYGNKHECACYRDKLSSKGTPKCP 108

[Close]

BLAST of Lcy01g018340 vs. ExPASy TrEMBL
Match: A0A6J1HDT0 (peamaclein-like OS=Cucurbita moschata OX=3662 GN=LOC111462598 PE=3 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 2.9e-36
Identity = 72/85 (84.71%), Postives = 78/85 (91.76%), Query Frame = 0


Query: 1  MKFLHLLTWLLVLTSFLQLVLAGSGFCGSKCKNRCAKAGVQDRCMKYCGICCEKCRCVPS 60
          MKFLHLL+W+LVLTSFLQL LA  G C SKC +RCAKAGVQDRC+KYCGICCEKC CVPS
Sbjct: 1  MKFLHLLSWILVLTSFLQLSLAAPGVCSSKCASRCAKAGVQDRCLKYCGICCEKCGCVPS 60

Query: 61 GTYGNKHECPCYGQMKNSKGKSKCP 86
          GTYGNKHECPCYG++KNSKGKSKCP
Sbjct: 61 GTYGNKHECPCYGRIKNSKGKSKCP 85

[Close]

BLAST of Lcy01g018340 vs. ExPASy TrEMBL
Match: A0A6J1K7T2 (peamaclein-like OS=Cucurbita maxima OX=3661 GN=LOC111492448 PE=3 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.1e-35
Identity = 73/85 (85.88%), Postives = 78/85 (91.76%), Query Frame = 0


Query: 1  MKFLHLLTWLLVLTSFLQLVLAGSGFCGSKCKNRCAKAGVQDRCMKYCGICCEKCRCVPS 60
          MKFLHLL+ +LVLTSFLQL LA  GFC SKC +RCAKAGVQ+RC+KYCGICCEKC CVPS
Sbjct: 1  MKFLHLLSIILVLTSFLQLSLAAPGFCSSKCGSRCAKAGVQNRCLKYCGICCEKCGCVPS 60

Query: 61 GTYGNKHECPCYGQMKNSKGKSKCP 86
          GTYGNKHECPCYGQMKNSKGKSKCP
Sbjct: 61 GTYGNKHECPCYGQMKNSKGKSKCP 85

[Close]

BLAST of Lcy01g018340 vs. ExPASy TrEMBL
Match: A0A0A0LKN7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G354910 PE=3 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.1e-35
Identity = 70/85 (82.35%), Postives = 76/85 (89.41%), Query Frame = 0


Query: 1  MKFLHLLTWLLVLTSFLQLVLAGSGFCGSKCKNRCAKAGVQDRCMKYCGICCEKCRCVPS 60
          MKFLHLLTWLL+LTSFL+L L   GFCG KC+ RC+KAGV+DRCMKYCGICCEKC CVPS
Sbjct: 1  MKFLHLLTWLLLLTSFLELSLGAPGFCGWKCRRRCSKAGVRDRCMKYCGICCEKCGCVPS 60

Query: 61 GTYGNKHECPCYGQMKNSKGKSKCP 86
          GTYGNKHECPCYG +KNSKG SKCP
Sbjct: 61 GTYGNKHECPCYGNLKNSKGNSKCP 85

[Close]

BLAST of Lcy01g018340 vs. ExPASy TrEMBL
Match: A0A1S3BAP8 (peamaclein-like OS=Cucumis melo OX=3656 GN=LOC103487854 PE=3 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 7.0e-35
Identity = 69/85 (81.18%), Postives = 75/85 (88.24%), Query Frame = 0


Query: 1  MKFLHLLTWLLVLTSFLQLVLAGSGFCGSKCKNRCAKAGVQDRCMKYCGICCEKCRCVPS 60
          MKFLHLLTWLL+LTSFL+L L   GFCG KC+ RC+KAGV+DRCMKYCGICC KC CVPS
Sbjct: 1  MKFLHLLTWLLLLTSFLELSLGAPGFCGWKCRRRCSKAGVRDRCMKYCGICCVKCGCVPS 60

Query: 61 GTYGNKHECPCYGQMKNSKGKSKCP 86
          GTYGNKHECPCYG +KNSKG SKCP
Sbjct: 61 GTYGNKHECPCYGNLKNSKGNSKCP 85

[Close]

BLAST of Lcy01g018340 vs. ExPASy TrEMBL
Match: A0A6J1BV69 (peamaclein-like OS=Momordica charantia OX=3673 GN=LOC111005017 PE=3 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 3.6e-31
Identity = 68/88 (77.27%), Postives = 73/88 (82.95%), Query Frame = 0


Query: 1  MKFLHLLTWLLVLTSFLQLVLAGSG---FCGSKCKNRCAKAGVQDRCMKYCGICCEKCRC 60
          MKFLHLLT LL+L+ F+ L +A SG   FC  KCK RCAKAGVQDRC+KYCGICCEKC C
Sbjct: 1  MKFLHLLTCLLLLSFFVDLSMAASGEGSFCNWKCKERCAKAGVQDRCIKYCGICCEKCHC 60

Query: 61 VPSGTYGNKHECPCYGQMKNSKGKSKCP 86
          VPSGTYGNKHECPCY QMKNSK K KCP
Sbjct: 61 VPSGTYGNKHECPCYAQMKNSKRKPKCP 88

[Close]

BLAST of Lcy01g018340 vs. NCBI nr
Match: XP_023546651.1 (peamaclein [Cucurbita pepo subsp. pepo])

HSP 1 Score: 161.8 bits (408), Expect = 2.7e-36
Identity = 74/85 (87.06%), Postives = 78/85 (91.76%), Query Frame = 0


Query: 1  MKFLHLLTWLLVLTSFLQLVLAGSGFCGSKCKNRCAKAGVQDRCMKYCGICCEKCRCVPS 60
          MKFLHLL+ +LVLTSFLQL LA  GFC SKC +RCAKAGVQDRC+KYCGICCEKC CVPS
Sbjct: 1  MKFLHLLSMILVLTSFLQLSLAAPGFCSSKCASRCAKAGVQDRCLKYCGICCEKCGCVPS 60

Query: 61 GTYGNKHECPCYGQMKNSKGKSKCP 86
          GTYGNKHECPCYGQMKNSKGKSKCP
Sbjct: 61 GTYGNKHECPCYGQMKNSKGKSKCP 85

[Close]

BLAST of Lcy01g018340 vs. NCBI nr
Match: XP_022961995.1 (peamaclein-like [Cucurbita moschata] >KAG7029319.1 Snakin-1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 160.6 bits (405), Expect = 5.9e-36
Identity = 72/85 (84.71%), Postives = 78/85 (91.76%), Query Frame = 0


Query: 1  MKFLHLLTWLLVLTSFLQLVLAGSGFCGSKCKNRCAKAGVQDRCMKYCGICCEKCRCVPS 60
          MKFLHLL+W+LVLTSFLQL LA  G C SKC +RCAKAGVQDRC+KYCGICCEKC CVPS
Sbjct: 1  MKFLHLLSWILVLTSFLQLSLAAPGVCSSKCASRCAKAGVQDRCLKYCGICCEKCGCVPS 60

Query: 61 GTYGNKHECPCYGQMKNSKGKSKCP 86
          GTYGNKHECPCYG++KNSKGKSKCP
Sbjct: 61 GTYGNKHECPCYGRIKNSKGKSKCP 85

[Close]

BLAST of Lcy01g018340 vs. NCBI nr
Match: XP_022997556.1 (peamaclein-like [Cucurbita maxima])

HSP 1 Score: 158.7 bits (400), Expect = 2.2e-35
Identity = 73/85 (85.88%), Postives = 78/85 (91.76%), Query Frame = 0


Query: 1  MKFLHLLTWLLVLTSFLQLVLAGSGFCGSKCKNRCAKAGVQDRCMKYCGICCEKCRCVPS 60
          MKFLHLL+ +LVLTSFLQL LA  GFC SKC +RCAKAGVQ+RC+KYCGICCEKC CVPS
Sbjct: 1  MKFLHLLSIILVLTSFLQLSLAAPGFCSSKCGSRCAKAGVQNRCLKYCGICCEKCGCVPS 60

Query: 61 GTYGNKHECPCYGQMKNSKGKSKCP 86
          GTYGNKHECPCYGQMKNSKGKSKCP
Sbjct: 61 GTYGNKHECPCYGQMKNSKGKSKCP 85

[Close]

BLAST of Lcy01g018340 vs. NCBI nr
Match: XP_004142881.1 (peamaclein [Cucumis sativus] >KGN62465.1 hypothetical protein Csa_018588 [Cucumis sativus])

HSP 1 Score: 158.7 bits (400), Expect = 2.2e-35
Identity = 70/85 (82.35%), Postives = 76/85 (89.41%), Query Frame = 0


Query: 1  MKFLHLLTWLLVLTSFLQLVLAGSGFCGSKCKNRCAKAGVQDRCMKYCGICCEKCRCVPS 60
          MKFLHLLTWLL+LTSFL+L L   GFCG KC+ RC+KAGV+DRCMKYCGICCEKC CVPS
Sbjct: 1  MKFLHLLTWLLLLTSFLELSLGAPGFCGWKCRRRCSKAGVRDRCMKYCGICCEKCGCVPS 60

Query: 61 GTYGNKHECPCYGQMKNSKGKSKCP 86
          GTYGNKHECPCYG +KNSKG SKCP
Sbjct: 61 GTYGNKHECPCYGNLKNSKGNSKCP 85

[Close]

BLAST of Lcy01g018340 vs. NCBI nr
Match: XP_038885998.1 (peamaclein-like [Benincasa hispida])

HSP 1 Score: 157.9 bits (398), Expect = 3.8e-35
Identity = 72/85 (84.71%), Postives = 74/85 (87.06%), Query Frame = 0


Query: 1  MKFLHLLTWLLVLTSFLQLVLAGSGFCGSKCKNRCAKAGVQDRCMKYCGICCEKCRCVPS 60
          MKFLHLLTWLLVLTSFL+L  +  G C SKCK RCAKAGVQDRCMKYCGICC KC CVPS
Sbjct: 8  MKFLHLLTWLLVLTSFLELSSSAPGLCRSKCKKRCAKAGVQDRCMKYCGICCAKCGCVPS 67

Query: 61 GTYGNKHECPCYGQMKNSKGKSKCP 86
          GTYGNKHECPCYG MKNSKGK KCP
Sbjct: 68 GTYGNKHECPCYGNMKNSKGKPKCP 92

[Close]

BLAST of Lcy01g018340 vs. TAIR 10
Match: AT5G59845.1 (Gibberellin-regulated family protein )

HSP 1 Score: 111.7 bits (278), Expect = 2.9e-25
Identity = 54/81 (66.67%), Postives = 59/81 (72.84%), Query Frame = 0


Query: 6  LLTWLLVLTSFLQLVLAGSGFCGSKCKNRCAKAGVQDRCMKYCGICCEKCR-CVPSGTYG 65
          L+  LL+ +S   L  A S  CG KC  RC+KAG QDRC+KYC ICCEKC  CVPSGTYG
Sbjct: 9  LIISLLITSSLFILSTADSSPCGGKCNVRCSKAGRQDRCLKYCNICCEKCNYCVPSGTYG 68

Query: 66 NKHECPCYGQMKNSKGKSKCP 86
          NK ECPCY  MKNSKG SKCP
Sbjct: 69 NKDECPCYRDMKNSKGTSKCP 89

[Close]

BLAST of Lcy01g018340 vs. TAIR 10
Match: AT2G39540.1 (Gibberellin-regulated family protein )

HSP 1 Score: 107.1 bits (266), Expect = 7.2e-24
Identity = 45/75 (60.00%), Postives = 55/75 (73.33%), Query Frame = 0


Query: 11 LVLTSFLQLVLAGSGFCGSKCKNRCAKAGVQDRCMKYCGICCEKCRCVPSGTYGNKHECP 70
          L+LTS   ++ +    CG KC  RC+KAG  + C+KYC ICC+KC CVPSGT+G+K ECP
Sbjct: 13 LLLTSSFSVLSSADSSCGGKCNVRCSKAGQHEECLKYCNICCQKCNCVPSGTFGHKDECP 72

Query: 71 CYGQMKNSKGKSKCP 86
          CY  MKNSKG SKCP
Sbjct: 73 CYRDMKNSKGGSKCP 87

[Close]

BLAST of Lcy01g018340 vs. TAIR 10
Match: AT2G14900.1 (Gibberellin-regulated family protein )

HSP 1 Score: 102.4 bits (254), Expect = 1.8e-22
Identity = 40/60 (66.67%), Postives = 49/60 (81.67%), Query Frame = 0


Query: 26  FCGSKCKNRCAKAGVQDRCMKYCGICCEKCRCVPSGTYGNKHECPCYGQMKNSKGKSKCP 85
           +CG KC+ RC +AG++DRC+KYCGICC+ C+CVPSGTYGNKHEC CY    +SKG  KCP
Sbjct: 49  WCGQKCEGRCKEAGMKDRCLKYCGICCKDCQCVPSGTYGNKHECACYRDKLSSKGTPKCP 108

[Close]

BLAST of Lcy01g018340 vs. TAIR 10
Match: AT1G10588.1 (Gibberellin-regulated family protein )

HSP 1 Score: 100.1 bits (248), Expect = 8.8e-22
Identity = 47/77 (61.04%), Postives = 54/77 (70.13%), Query Frame = 0


Query: 10 LLVLTSFLQLVLAGSGFCGSKCKNRCAKAG-VQDRCMKYCGICCEKCRCVPSGTYGNKHE 69
          LL+ +SF  L  A S  CG KC  RC+KA    + C++ C ICC+KC CVPSGTYGNK E
Sbjct: 14 LLLTSSFYVLSSADSSACGGKCSVRCSKADRTHEECLEDCDICCQKCNCVPSGTYGNKDE 73

Query: 70 CPCYGQMKNSKGKSKCP 86
          CPCY  MKNSKG SKCP
Sbjct: 74 CPCYRDMKNSKGGSKCP 90

[Close]

BLAST of Lcy01g018340 vs. TAIR 10
Match: AT1G10588.2 (Gibberellin-regulated family protein )

HSP 1 Score: 97.8 bits (242), Expect = 4.4e-21
Identity = 44/76 (57.89%), Postives = 53/76 (69.74%), Query Frame = 0


Query: 11 LVLTSFLQLVLAGSGFCGSKCKNRCAKAG-VQDRCMKYCGICCEKCRCVPSGTYGNKHEC 70
          L+LTS   ++ +    CG KC  RC+KA    + C++ C ICC+KC CVPSGTYGNK EC
Sbjct: 14 LLLTSSFYVLSSADSSCGGKCSVRCSKADRTHEECLEDCDICCQKCNCVPSGTYGNKDEC 73

Query: 71 PCYGQMKNSKGKSKCP 86
          PCY  MKNSKG SKCP
Sbjct: 74 PCYRDMKNSKGGSKCP 89

The following BLAST results are available for this feature:

BLAST of Lcy01g018340 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q948Z4	5.0e-30	71.25	Snakin-1 OS=Solanum tuberosum OX=4113 GN=SN1 PE=1 SV=1	[more]
P86888	2.9e-25	76.19	Peamaclein OS=Prunus persica OX=3760 PE=1 SV=1	[more]
Q8LFM2	4.1e-24	66.67	Gibberellin-regulated protein 10 OS=Arabidopsis thaliana OX=3702 GN=GASA10 PE=2 ...	[more]
O80641	1.0e-22	60.00	Gibberellin-regulated protein 8 OS=Arabidopsis thaliana OX=3702 GN=At2g39540 PE=...	[more]
O82328	2.5e-21	66.67	Gibberellin-regulated protein 7 OS=Arabidopsis thaliana OX=3702 GN=GASA7 PE=3 SV...	[more]

BLAST of Lcy01g018340 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HDT0	2.9e-36	84.71	peamaclein-like OS=Cucurbita moschata OX=3662 GN=LOC111462598 PE=3 SV=1	[more]
A0A6J1K7T2	1.1e-35	85.88	peamaclein-like OS=Cucurbita maxima OX=3661 GN=LOC111492448 PE=3 SV=1	[more]
A0A0A0LKN7	1.1e-35	82.35	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G354910 PE=3 SV=1	[more]
A0A1S3BAP8	7.0e-35	81.18	peamaclein-like OS=Cucumis melo OX=3656 GN=LOC103487854 PE=3 SV=1	[more]
A0A6J1BV69	3.6e-31	77.27	peamaclein-like OS=Momordica charantia OX=3673 GN=LOC111005017 PE=3 SV=1	[more]

BLAST of Lcy01g018340 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023546651.1	2.7e-36	87.06	peamaclein [Cucurbita pepo subsp. pepo]	[more]
XP_022961995.1	5.9e-36	84.71	peamaclein-like [Cucurbita moschata] >KAG7029319.1 Snakin-1 [Cucurbita argyrospe...	[more]
XP_022997556.1	2.2e-35	85.88	peamaclein-like [Cucurbita maxima]	[more]
XP_004142881.1	2.2e-35	82.35	peamaclein [Cucumis sativus] >KGN62465.1 hypothetical protein Csa_018588 [Cucumi...	[more]
XP_038885998.1	3.8e-35	84.71	peamaclein-like [Benincasa hispida]	[more]

BLAST of Lcy01g018340 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59845.1	2.9e-25	66.67	Gibberellin-regulated family protein	[more]
AT2G39540.1	7.2e-24	60.00	Gibberellin-regulated family protein	[more]
AT2G14900.1	1.8e-22	66.67	Gibberellin-regulated family protein	[more]
AT1G10588.1	8.8e-22	61.04	Gibberellin-regulated family protein	[more]
AT1G10588.2	4.4e-21	57.89	Gibberellin-regulated family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003854	Gibberellin regulated protein	PFAM	PF02704	GASA	coord: 26..85 e-value: 6.4E-23 score: 80.7
None	No IPR available	PANTHER	PTHR23201	EXTENSIN, PROLINE-RICH PROTEIN	coord: 6..85
None	No IPR available	PANTHER	PTHR23201:SF88	SNAKIN-1	coord: 6..85

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy01g018340.1	Lcy01g018340.1	mRNA