Lcy01g018150 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy01g018150
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	ethylene-responsive transcription factor RAP2-1
Location	Chr01: 39704853 .. 39706371 (-)
RNA-Seq Expression	Lcy01g018150
Synteny	Lcy01g018150

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTATTTTTTAATTTTTTAAAAAGGAAATTTGTTAGATAGACAGACAGAGTGACAGACGATTGAATTTGTCGGCCATCTTTGGATTTGTCTCTTCACGACGTGGTGGCCGTCACCAATTCACACTCATATAAACCCACACACACTCATTAATCTAATTTCATTCCTTCCCTCTCTCTCAAACCTCAAACGCCGAGCTCACCACGTCCTTGTCCTAAGTCTAACTCCTTTTTCAGTCTTCTCTATTTGGTGGGGTTTGGCCGTTTTTCCTACTCTCTCTGGTCCCCTCTTTTCTTCCTTGTTATGGGTTTTCCGTAACGAATTCAACTAATTTTGTGAAATTGGCTCTGATAACATGGAAGAAATTGCAGAACCTACCGGCGTCGAGAAGCGGAAGCAGCAGCAGAGAGGGCGGCAGGAGAAGCCCTACAGAGGAATTAGGATGAGGAAGTGGGGGAAGTGGGTGGCGGAAATCAGAGAGCCCAACAAGAGGTCTAGGATTTGGCTTGGTTCTTACACAACCCCCGTCGCCGCCGCCAGAGCCTACGACACGGCGGTGTTCTATCTGCGAGGCCCATCGGCCCGCCTCAACTTCCCGGACCTGATCTTACAGGACATGGATCAGCAGCTGCTGGACGTTTCCCCGTCTTCAATTCGCAAAAGGGCCATTGAGGTCGGCGCCAGAGTGGACGCCGCCGCCCACCAGACCTCTCTCCGCCAATCCAAACCCATTTCCGACAAGCCCGATTTGAACCAGTTTCCGGACCCGGAAAGCTCGGATGAAGATTGATTGACGAATAATCACTGTTTCATAGCATAGCTTCTCCACTTTTACGATGAAATAGAAAAGACAAAAGGAAAATCAAATCGTGGGTGGGGGTGGATTTGGAAATTGGAATGCAACCAAAAATGGTTTCCGCTTCTTGATTCGCTATATATCTAAATATAGCTTCCAATTTGTAACAGGAGAGATGGAAAAGCAAGCTTGTCGATGGATCCGAGTACTAATTTAACTTTTTCTTTTCTTTTTTTTTTGGATTGTTTTCTTGTGAATGGTTTGGATTAATTTTTGTGTTTTACATCTTCCCAGAAAATGGGTATTTGAGAAAAAAGAAAAAGAAAAAGAAAGTTGAATTGAATAGAATAGCGGCGTTGATTGGTGTAAAATTAGAGGTTGGGCGAAAGAAGAAGAAGAAGATAAGGATGAGTGTTTATTGGGGGACCGCCGTGTGGAGTCCACAAATCAAAGGATAATGTCGCCGTCGCCGTCGCCGTCGTCATGGTGGATGCCTTTGCTTACGAAACGGAAACGGAAACTCAAACTCCAATTTTAAGTTTCTTCTAGAAGGTCGGTGGTAATATTTTATTTATTTTTATTTATTGTGAAATTGTGATATTATTTTACAATAGGAAAAGCAAAGGCGAATGATGCTCGTAACGACGACATGACAAGACAACACAGGTTTTTTAACAAATTTTTTCTGGGTTTTCCAAAGATAATAAATCCGACCGACCACTTAGC

mRNA sequence

TTATTTTTTAATTTTTTAAAAAGGAAATTTGTTAGATAGACAGACAGAGTGACAGACGATTGAATTTGTCGGCCATCTTTGGATTTGTCTCTTCACGACGTGGTGGCCGTCACCAATTCACACTCATATAAACCCACACACACTCATTAATCTAATTTCATTCCTTCCCTCTCTCTCAAACCTCAAACGCCGAGCTCACCACGTCCTTGTCCTAAGTCTAACTCCTTTTTCAGTCTTCTCTATTTGGTGGGGTTTGGCCGTTTTTCCTACTCTCTCTGGTCCCCTCTTTTCTTCCTTGTTATGGGTTTTCCGTAACGAATTCAACTAATTTTGTGAAATTGGCTCTGATAACATGGAAGAAATTGCAGAACCTACCGGCGTCGAGAAGCGGAAGCAGCAGCAGAGAGGGCGGCAGGAGAAGCCCTACAGAGGAATTAGGATGAGGAAGTGGGGGAAGTGGGTGGCGGAAATCAGAGAGCCCAACAAGAGGTCTAGGATTTGGCTTGGTTCTTACACAACCCCCGTCGCCGCCGCCAGAGCCTACGACACGGCGGTGTTCTATCTGCGAGGCCCATCGGCCCGCCTCAACTTCCCGGACCTGATCTTACAGGACATGGATCAGCAGCTGCTGGACGTTTCCCCGTCTTCAATTCGCAAAAGGGCCATTGAGGTCGGCGCCAGAGTGGACGCCGCCGCCCACCAGACCTCTCTCCGCCAATCCAAACCCATTTCCGACAAGCCCGATTTGAACCAGTTTCCGGACCCGGAAAGCTCGGATGAAGATTGATTGACGAATAATCACTGTTTCATAGCATAGCTTCTCCACTTTTACGATGAAATAGAAAAGACAAAAGGAAAATCAAATCGTGGGTGGGGGTGGATTTGGAAATTGGAATGCAACCAAAAATGGTTTCCGCTTCTTGATTCGCTATATATCTAAATATAGCTTCCAATTTGTAACAGGAGAGATGGAAAAGCAAGCTTGTCGATGGATCCGAGTACTAATTTAACTTTTTCTTTTCTTTTTTTTTTGGATTGTTTTCTTGTGAATGGTTTGGATTAATTTTTGTGTTTTACATCTTCCCAGAAAATGGGTATTTGAGAAAAAAGAAAAAGAAAAAGAAAGTTGAATTGAATAGAATAGCGGCGTTGATTGGTGTAAAATTAGAGGTTGGGCGAAAGAAGAAGAAGAAGATAAGGATGAGTGTTTATTGGGGGACCGCCGTGTGGAGTCCACAAATCAAAGGATAATGTCGCCGTCGCCGTCGCCGTCGTCATGGTGGATGCCTTTGCTTACGAAACGGAAACGGAAACTCAAACTCCAATTTTAAGTTTCTTCTAGAAGGTCGGTGGTAATATTTTATTTATTTTTATTTATTGTGAAATTGTGATATTATTTTACAATAGGAAAAGCAAAGGCGAATGATGCTCGTAACGACGACATGACAAGACAACACAGGTTTTTTAACAAATTTTTTCTGGGTTTTCCAAAGATAATAAATCCGACCGACCACTTAGC

Coding sequence (CDS)

ATGGAAGAAATTGCAGAACCTACCGGCGTCGAGAAGCGGAAGCAGCAGCAGAGAGGGCGGCAGGAGAAGCCCTACAGAGGAATTAGGATGAGGAAGTGGGGGAAGTGGGTGGCGGAAATCAGAGAGCCCAACAAGAGGTCTAGGATTTGGCTTGGTTCTTACACAACCCCCGTCGCCGCCGCCAGAGCCTACGACACGGCGGTGTTCTATCTGCGAGGCCCATCGGCCCGCCTCAACTTCCCGGACCTGATCTTACAGGACATGGATCAGCAGCTGCTGGACGTTTCCCCGTCTTCAATTCGCAAAAGGGCCATTGAGGTCGGCGCCAGAGTGGACGCCGCCGCCCACCAGACCTCTCTCCGCCAATCCAAACCCATTTCCGACAAGCCCGATTTGAACCAGTTTCCGGACCCGGAAAGCTCGGATGAAGATTGA

Protein sequence

MEEIAEPTGVEKRKQQQRGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLNFPDLILQDMDQQLLDVSPSSIRKRAIEVGARVDAAAHQTSLRQSKPISDKPDLNQFPDPESSDED

Homology

[Close]

BLAST of Lcy01g018150 vs. ExPASy Swiss-Prot
Match: Q8LC30 (Ethylene-responsive transcription factor RAP2-1 OS=Arabidopsis thaliana OX=3702 GN=RAP2-1 PE=2 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 1.2e-36
Identity = 88/149 (59.06%), Postives = 103/149 (69.13%), Query Frame = 0


Query: 1   MEEIAEPTGVEKRKQQQRGR------QEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSY 60
           ME   E + + KR+Q  +          KPYRGIR RKWGKWVAEIREPNKRSR+WLGSY
Sbjct: 1   MEREQEESTMRKRRQPPQEEVPNHVATRKPYRGIRRRKWGKWVAEIREPNKRSRLWLGSY 60

Query: 61  TTPVAAARAYDTAVFYLRGPSARLNFPDLILQDMDQ----QLLDVSPSSIRKRAIEVGAR 120
           TT +AAARAYD AVFYLRGPSARLNFPDL+LQ+ D        D+  + IR++A EVGAR
Sbjct: 61  TTDIAAARAYDVAVFYLRGPSARLNFPDLLLQEEDHLSAATTADMPAALIREKAAEVGAR 120

Query: 121 VDA--AAHQTSLRQSKPISDKPDLNQFPD 138
           VDA  A+   S+  S P   KPDLNQ P+
Sbjct: 121 VDALLASAAPSMAHSTPPVIKPDLNQIPE 149

[Close]

BLAST of Lcy01g018150 vs. ExPASy Swiss-Prot
Match: O22174 (Ethylene-responsive transcription factor ERF008 OS=Arabidopsis thaliana OX=3702 GN=ERF008 PE=2 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 4.8e-33
Identity = 81/148 (54.73%), Postives = 98/148 (66.22%), Query Frame = 0


Query: 18  RGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSAR 77
           R R  KPY+GIRMRKWGKWVAEIREPNKRSRIWLGSY TP AAARAYDTAVFYLRGPSAR
Sbjct: 21  RKRDLKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYATPEAAARAYDTAVFYLRGPSAR 80

Query: 78  LNFPDLI----LQDMDQQLLDVSPSSIRKRAIEVGARVDAAAH----------------- 137
           LNFP+L+    + +   +  D+S + IR++A EVGA+VDA                    
Sbjct: 81  LNFPELLAGLTVSNGGGRGGDLSAAYIRRKAAEVGAQVDALGATVVVNTGGENRGDYEKI 140

Query: 138 QTSLRQSKPISDKPDLNQFPDPESSDED 145
           +   +      ++ DLN+ PDPE+SD D
Sbjct: 141 ENCRKSGNGSLERVDLNKLPDPENSDGD 168

[Close]

BLAST of Lcy01g018150 vs. ExPASy Swiss-Prot
Match: Q9SNE1 (Ethylene-responsive transcription factor ERF011 OS=Arabidopsis thaliana OX=3702 GN=ERF011 PE=2 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 4.8e-33
Identity = 78/137 (56.93%), Postives = 101/137 (73.72%), Query Frame = 0


Query: 20  RQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLN 79
           ++E+P++GIRMRKWGKWVAEIREPNKRSR+WLGSY+TP AAARAYDTAVFYLRGP+A LN
Sbjct: 16  KRERPFKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTAVFYLRGPTATLN 75

Query: 80  FPDLILQDMDQQLLDVSPSSIRKRAIEVGARVDA--AAHQTSLRQSKPISDK-------- 139
           FP+L+     +   D+S ++IRK+A EVGA+VDA  A    + ++ +  S K        
Sbjct: 76  FPELLPCTSAE---DMSAATIRKKATEVGAQVDAIGATVVQNNKRRRVFSQKRDFGGGLL 135

Query: 140 --PDLNQFPDPESSDED 145
              DLN+ PDPE+ D+D
Sbjct: 136 ELVDLNKLPDPENLDDD 149

[Close]

BLAST of Lcy01g018150 vs. ExPASy Swiss-Prot
Match: Q8W3M3 (Ethylene-responsive transcription factor RAP2-9 OS=Arabidopsis thaliana OX=3702 GN=RAP2-9 PE=2 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 6.3e-33
Identity = 80/130 (61.54%), Postives = 94/130 (72.31%), Query Frame = 0


Query: 11  EKRKQQQRGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFY 70
           EK K+      EK Y+GIRMRKWGKWVAEIREPNKRSRIWLGSY T VAAARAYDTAVFY
Sbjct: 22  EKPKRNLISSNEKRYKGIRMRKWGKWVAEIREPNKRSRIWLGSYKTAVAAARAYDTAVFY 81

Query: 71  LRGPSARLNFPDLILQD---MDQQLLDVSPSSIRKRAIEVGARVDAAAHQTSLRQSKPIS 130
           LRGPSARLNFP+ + +D    +    D+SP+ IRK+A EVGARVDA      LR    + 
Sbjct: 82  LRGPSARLNFPEEVFKDGNGGEGLGGDMSPTLIRKKAAEVGARVDA-----ELRLENRMV 141

Query: 131 DKPDLNQFPD 138
           +  D+N+ P+
Sbjct: 142 ENLDMNKLPE 146

[Close]

BLAST of Lcy01g018150 vs. ExPASy Swiss-Prot
Match: Q9FH94 (Ethylene-responsive transcription factor ERF010 OS=Arabidopsis thaliana OX=3702 GN=ERF010 PE=2 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 3.1e-32
Identity = 67/94 (71.28%), Postives = 83/94 (88.30%), Query Frame = 0


Query: 20  RQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLN 79
           ++++PY+GIRMRKWGKWVAEIREPNKRSR+WLGSY+TP AAARAYDTAVFYLRGP+ARLN
Sbjct: 16  KRDRPYKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTAVFYLRGPTARLN 75

Query: 80  FPDLILQDMDQQLLDVSPSSIRKRAIEVGARVDA 114
           FP+L+  +      D+S ++IRK+A EVGA+VDA
Sbjct: 76  FPELLPGEKFSD-EDMSAATIRKKATEVGAQVDA 108

[Close]

BLAST of Lcy01g018150 vs. ExPASy TrEMBL
Match: A0A5A7V5C8 (Ethylene-responsive transcription factor RAP2-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00520 PE=4 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 2.5e-64
Identity = 133/144 (92.36%), Postives = 135/144 (93.75%), Query Frame = 0


Query: 1   MEEIAEPTGVEKRKQQQRGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAA 60
           MEE  + T  EKRKQ   GRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTP+AA
Sbjct: 1   MEESVDTTIPEKRKQS--GRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAA 60

Query: 61  ARAYDTAVFYLRGPSARLNFPDLILQDMDQQLLDVSPSSIRKRAIEVGARVDAAAHQTSL 120
           ARAYDTAVFYLRGPSARLNFPDLILQDMD QLLDVSPSSIRKRAIEVGARVDAAAHQTSL
Sbjct: 61  ARAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQTSL 120

Query: 121 RQSKPISDKPDLNQFPDPESSDED 145
           RQSKPISDKPDLNQFPDPESSDED
Sbjct: 121 RQSKPISDKPDLNQFPDPESSDED 142

[Close]

BLAST of Lcy01g018150 vs. ExPASy TrEMBL
Match: A0A1S3BAR1 (ethylene-responsive transcription factor RAP2-1 OS=Cucumis melo OX=3656 GN=LOC103487870 PE=4 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 2.5e-64
Identity = 133/144 (92.36%), Postives = 135/144 (93.75%), Query Frame = 0


Query: 1   MEEIAEPTGVEKRKQQQRGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAA 60
           MEE  + T  EKRKQ   GRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTP+AA
Sbjct: 1   MEESVDTTIPEKRKQS--GRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAA 60

Query: 61  ARAYDTAVFYLRGPSARLNFPDLILQDMDQQLLDVSPSSIRKRAIEVGARVDAAAHQTSL 120
           ARAYDTAVFYLRGPSARLNFPDLILQDMD QLLDVSPSSIRKRAIEVGARVDAAAHQTSL
Sbjct: 61  ARAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQTSL 120

Query: 121 RQSKPISDKPDLNQFPDPESSDED 145
           RQSKPISDKPDLNQFPDPESSDED
Sbjct: 121 RQSKPISDKPDLNQFPDPESSDED 142

[Close]

BLAST of Lcy01g018150 vs. ExPASy TrEMBL
Match: A0A0A0LR87 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G356600 PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 7.2e-64
Identity = 133/144 (92.36%), Postives = 134/144 (93.06%), Query Frame = 0


Query: 1   MEEIAEPTGVEKRKQQQRGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAA 60
           MEE  E T  EKRKQ   GRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTP+AA
Sbjct: 1   MEESVETTIPEKRKQS--GRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAA 60

Query: 61  ARAYDTAVFYLRGPSARLNFPDLILQDMDQQLLDVSPSSIRKRAIEVGARVDAAAHQTSL 120
           ARAYDTAVFYLRGPSARLNFPDLILQDMD QLLDVSPSSIRKRAIEVGARVDAAAHQTSL
Sbjct: 61  ARAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQTSL 120

Query: 121 RQSKPISDKPDLNQFPDPESSDED 145
           RQSKPISDKPDLNQFPDPESS ED
Sbjct: 121 RQSKPISDKPDLNQFPDPESSGED 142

[Close]

BLAST of Lcy01g018150 vs. ExPASy TrEMBL
Match: A0A6J1HCJ9 (ethylene-responsive transcription factor RAP2-1-like OS=Cucurbita moschata OX=3662 GN=LOC111462838 PE=4 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 2.0e-61
Identity = 128/144 (88.89%), Postives = 135/144 (93.75%), Query Frame = 0


Query: 1   MEEIAEPTGVEKRKQQQRGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAA 60
           ME+  + T  EKRK Q  GRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTP+AA
Sbjct: 1   MEQTRDSTIPEKRK-QLTGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAA 60

Query: 61  ARAYDTAVFYLRGPSARLNFPDLILQDMDQQLLDVSPSSIRKRAIEVGARVDAAAHQTSL 120
           ARAYDTAVFYLRGPSARLNFPDLILQDMD QLLDVSPSSIRKRAIEVGARVDAAA++TSL
Sbjct: 61  ARAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAANRTSL 120

Query: 121 RQSKPISDKPDLNQFPDPESSDED 145
           RQSKPIS+KPDLNQFP+PESSDED
Sbjct: 121 RQSKPISEKPDLNQFPEPESSDED 143

[Close]

BLAST of Lcy01g018150 vs. ExPASy TrEMBL
Match: A0A6J1KB24 (ethylene-responsive transcription factor RAP2-1-like OS=Cucurbita maxima OX=3661 GN=LOC111492253 PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 4.4e-61
Identity = 127/144 (88.19%), Postives = 135/144 (93.75%), Query Frame = 0


Query: 1   MEEIAEPTGVEKRKQQQRGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAA 60
           ME+  + T  EKRK Q  GRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTP+AA
Sbjct: 1   MEQTRDSTIPEKRK-QLTGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAA 60

Query: 61  ARAYDTAVFYLRGPSARLNFPDLILQDMDQQLLDVSPSSIRKRAIEVGARVDAAAHQTSL 120
           ARAYDTAVFYLRGPSARLNFPDLILQDMD QLLDVSPSSIR+RAIEVGARVDAAA++TSL
Sbjct: 61  ARAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRRRAIEVGARVDAAANRTSL 120

Query: 121 RQSKPISDKPDLNQFPDPESSDED 145
           RQSKPIS+KPDLNQFP+PESSDED
Sbjct: 121 RQSKPISEKPDLNQFPEPESSDED 143

[Close]

BLAST of Lcy01g018150 vs. NCBI nr
Match: XP_038884237.1 (ethylene-responsive transcription factor RAP2-1-like [Benincasa hispida])

HSP 1 Score: 257.3 bits (656), Expect = 7.9e-65
Identity = 135/144 (93.75%), Postives = 136/144 (94.44%), Query Frame = 0


Query: 1   MEEIAEPTGVEKRKQQQRGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAA 60
           MEE  E T  EKRK QQ GRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTP+AA
Sbjct: 1   MEESVETTIPEKRK-QQTGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAA 60

Query: 61  ARAYDTAVFYLRGPSARLNFPDLILQDMDQQLLDVSPSSIRKRAIEVGARVDAAAHQTSL 120
           ARAYDTAVFYLRGPSARLNFPDLILQDMD QLLDVSPSSIRKRAIEVGARVDAAAHQTSL
Sbjct: 61  ARAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQTSL 120

Query: 121 RQSKPISDKPDLNQFPDPESSDED 145
           RQSKPISDKPDLNQFPDPESSDED
Sbjct: 121 RQSKPISDKPDLNQFPDPESSDED 143

[Close]

BLAST of Lcy01g018150 vs. NCBI nr
Match: XP_008444599.1 (PREDICTED: ethylene-responsive transcription factor RAP2-1 [Cucumis melo] >KAA0060919.1 ethylene-responsive transcription factor RAP2-1 [Cucumis melo var. makuwa])

HSP 1 Score: 254.6 bits (649), Expect = 5.1e-64
Identity = 133/144 (92.36%), Postives = 135/144 (93.75%), Query Frame = 0


Query: 1   MEEIAEPTGVEKRKQQQRGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAA 60
           MEE  + T  EKRKQ   GRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTP+AA
Sbjct: 1   MEESVDTTIPEKRKQS--GRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAA 60

Query: 61  ARAYDTAVFYLRGPSARLNFPDLILQDMDQQLLDVSPSSIRKRAIEVGARVDAAAHQTSL 120
           ARAYDTAVFYLRGPSARLNFPDLILQDMD QLLDVSPSSIRKRAIEVGARVDAAAHQTSL
Sbjct: 61  ARAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQTSL 120

Query: 121 RQSKPISDKPDLNQFPDPESSDED 145
           RQSKPISDKPDLNQFPDPESSDED
Sbjct: 121 RQSKPISDKPDLNQFPDPESSDED 142

[Close]

BLAST of Lcy01g018150 vs. NCBI nr
Match: XP_004142875.1 (ethylene-responsive transcription factor RAP2-1 [Cucumis sativus] >KGN62486.1 hypothetical protein Csa_018768 [Cucumis sativus])

HSP 1 Score: 253.1 bits (645), Expect = 1.5e-63
Identity = 133/144 (92.36%), Postives = 134/144 (93.06%), Query Frame = 0


Query: 1   MEEIAEPTGVEKRKQQQRGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAA 60
           MEE  E T  EKRKQ   GRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTP+AA
Sbjct: 1   MEESVETTIPEKRKQS--GRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAA 60

Query: 61  ARAYDTAVFYLRGPSARLNFPDLILQDMDQQLLDVSPSSIRKRAIEVGARVDAAAHQTSL 120
           ARAYDTAVFYLRGPSARLNFPDLILQDMD QLLDVSPSSIRKRAIEVGARVDAAAHQTSL
Sbjct: 61  ARAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQTSL 120

Query: 121 RQSKPISDKPDLNQFPDPESSDED 145
           RQSKPISDKPDLNQFPDPESS ED
Sbjct: 121 RQSKPISDKPDLNQFPDPESSGED 142

[Close]

BLAST of Lcy01g018150 vs. NCBI nr
Match: KAG7029328.1 (Ethylene-responsive transcription factor RAP2-1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 245.0 bits (624), Expect = 4.0e-61
Identity = 128/144 (88.89%), Postives = 135/144 (93.75%), Query Frame = 0


Query: 1   MEEIAEPTGVEKRKQQQRGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAA 60
           ME+  + T  EKRK Q  GRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTP+AA
Sbjct: 88  MEQTRDSTIPEKRK-QLTGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAA 147

Query: 61  ARAYDTAVFYLRGPSARLNFPDLILQDMDQQLLDVSPSSIRKRAIEVGARVDAAAHQTSL 120
           ARAYDTAVFYLRGPSARLNFPDLILQDMD QLLDVSPSSIRKRAIEVGARVDAAA++TSL
Sbjct: 148 ARAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAANRTSL 207

Query: 121 RQSKPISDKPDLNQFPDPESSDED 145
           RQSKPIS+KPDLNQFP+PESSDED
Sbjct: 208 RQSKPISEKPDLNQFPEPESSDED 230

[Close]

BLAST of Lcy01g018150 vs. NCBI nr
Match: XP_022962377.1 (ethylene-responsive transcription factor RAP2-1-like [Cucurbita moschata] >XP_023545716.1 ethylene-responsive transcription factor RAP2-1-like [Cucurbita pepo subsp. pepo] >KAG6598357.1 Ethylene-responsive transcription factor RAP2-1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 245.0 bits (624), Expect = 4.0e-61
Identity = 128/144 (88.89%), Postives = 135/144 (93.75%), Query Frame = 0


Query: 1   MEEIAEPTGVEKRKQQQRGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAA 60
           ME+  + T  EKRK Q  GRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTP+AA
Sbjct: 1   MEQTRDSTIPEKRK-QLTGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAA 60

Query: 61  ARAYDTAVFYLRGPSARLNFPDLILQDMDQQLLDVSPSSIRKRAIEVGARVDAAAHQTSL 120
           ARAYDTAVFYLRGPSARLNFPDLILQDMD QLLDVSPSSIRKRAIEVGARVDAAA++TSL
Sbjct: 61  ARAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAANRTSL 120

Query: 121 RQSKPISDKPDLNQFPDPESSDED 145
           RQSKPIS+KPDLNQFP+PESSDED
Sbjct: 121 RQSKPISEKPDLNQFPEPESSDED 143

[Close]

BLAST of Lcy01g018150 vs. TAIR 10
Match: AT1G46768.1 (related to AP2 1 )

HSP 1 Score: 154.1 bits (388), Expect = 8.7e-38
Identity = 88/149 (59.06%), Postives = 103/149 (69.13%), Query Frame = 0


Query: 1   MEEIAEPTGVEKRKQQQRGR------QEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSY 60
           ME   E + + KR+Q  +          KPYRGIR RKWGKWVAEIREPNKRSR+WLGSY
Sbjct: 1   MEREQEESTMRKRRQPPQEEVPNHVATRKPYRGIRRRKWGKWVAEIREPNKRSRLWLGSY 60

Query: 61  TTPVAAARAYDTAVFYLRGPSARLNFPDLILQDMDQ----QLLDVSPSSIRKRAIEVGAR 120
           TT +AAARAYD AVFYLRGPSARLNFPDL+LQ+ D        D+  + IR++A EVGAR
Sbjct: 61  TTDIAAARAYDVAVFYLRGPSARLNFPDLLLQEEDHLSAATTADMPAALIREKAAEVGAR 120

Query: 121 VDA--AAHQTSLRQSKPISDKPDLNQFPD 138
           VDA  A+   S+  S P   KPDLNQ P+
Sbjct: 121 VDALLASAAPSMAHSTPPVIKPDLNQIPE 149

[Close]

BLAST of Lcy01g018150 vs. TAIR 10
Match: AT2G23340.1 (DREB and EAR motif protein 3 )

HSP 1 Score: 142.1 bits (357), Expect = 3.4e-34
Identity = 81/148 (54.73%), Postives = 98/148 (66.22%), Query Frame = 0


Query: 18  RGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSAR 77
           R R  KPY+GIRMRKWGKWVAEIREPNKRSRIWLGSY TP AAARAYDTAVFYLRGPSAR
Sbjct: 21  RKRDLKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYATPEAAARAYDTAVFYLRGPSAR 80

Query: 78  LNFPDLI----LQDMDQQLLDVSPSSIRKRAIEVGARVDAAAH----------------- 137
           LNFP+L+    + +   +  D+S + IR++A EVGA+VDA                    
Sbjct: 81  LNFPELLAGLTVSNGGGRGGDLSAAYIRRKAAEVGAQVDALGATVVVNTGGENRGDYEKI 140

Query: 138 QTSLRQSKPISDKPDLNQFPDPESSDED 145
           +   +      ++ DLN+ PDPE+SD D
Sbjct: 141 ENCRKSGNGSLERVDLNKLPDPENSDGD 168

[Close]

BLAST of Lcy01g018150 vs. TAIR 10
Match: AT3G50260.1 (cooperatively regulated by ethylene and jasmonate 1 )

HSP 1 Score: 142.1 bits (357), Expect = 3.4e-34
Identity = 78/137 (56.93%), Postives = 101/137 (73.72%), Query Frame = 0


Query: 20  RQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLN 79
           ++E+P++GIRMRKWGKWVAEIREPNKRSR+WLGSY+TP AAARAYDTAVFYLRGP+A LN
Sbjct: 16  KRERPFKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTAVFYLRGPTATLN 75

Query: 80  FPDLILQDMDQQLLDVSPSSIRKRAIEVGARVDA--AAHQTSLRQSKPISDK-------- 139
           FP+L+     +   D+S ++IRK+A EVGA+VDA  A    + ++ +  S K        
Sbjct: 76  FPELLPCTSAE---DMSAATIRKKATEVGAQVDAIGATVVQNNKRRRVFSQKRDFGGGLL 135

Query: 140 --PDLNQFPDPESSDED 145
              DLN+ PDPE+ D+D
Sbjct: 136 ELVDLNKLPDPENLDDD 149

[Close]

BLAST of Lcy01g018150 vs. TAIR 10
Match: AT4G06746.1 (related to AP2 9 )

HSP 1 Score: 141.7 bits (356), Expect = 4.5e-34
Identity = 80/130 (61.54%), Postives = 94/130 (72.31%), Query Frame = 0


Query: 11  EKRKQQQRGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFY 70
           EK K+      EK Y+GIRMRKWGKWVAEIREPNKRSRIWLGSY T VAAARAYDTAVFY
Sbjct: 22  EKPKRNLISSNEKRYKGIRMRKWGKWVAEIREPNKRSRIWLGSYKTAVAAARAYDTAVFY 81

Query: 71  LRGPSARLNFPDLILQD---MDQQLLDVSPSSIRKRAIEVGARVDAAAHQTSLRQSKPIS 130
           LRGPSARLNFP+ + +D    +    D+SP+ IRK+A EVGARVDA      LR    + 
Sbjct: 82  LRGPSARLNFPEEVFKDGNGGEGLGGDMSPTLIRKKAAEVGARVDA-----ELRLENRMV 141

Query: 131 DKPDLNQFPD 138
           +  D+N+ P+
Sbjct: 142 ENLDMNKLPE 146

[Close]

BLAST of Lcy01g018150 vs. TAIR 10
Match: AT5G67190.1 (DREB and EAR motif protein 2 )

HSP 1 Score: 139.4 bits (350), Expect = 2.2e-33
Identity = 67/94 (71.28%), Postives = 83/94 (88.30%), Query Frame = 0


Query: 20  RQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLN 79
           ++++PY+GIRMRKWGKWVAEIREPNKRSR+WLGSY+TP AAARAYDTAVFYLRGP+ARLN
Sbjct: 16  KRDRPYKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTAVFYLRGPTARLN 75

Query: 80  FPDLILQDMDQQLLDVSPSSIRKRAIEVGARVDA 114
           FP+L+  +      D+S ++IRK+A EVGA+VDA
Sbjct: 76  FPELLPGEKFSD-EDMSAATIRKKATEVGAQVDA 108

The following BLAST results are available for this feature:

BLAST of Lcy01g018150 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LC30	1.2e-36	59.06	Ethylene-responsive transcription factor RAP2-1 OS=Arabidopsis thaliana OX=3702 ...	[more]
O22174	4.8e-33	54.73	Ethylene-responsive transcription factor ERF008 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9SNE1	4.8e-33	56.93	Ethylene-responsive transcription factor ERF011 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q8W3M3	6.3e-33	61.54	Ethylene-responsive transcription factor RAP2-9 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9FH94	3.1e-32	71.28	Ethylene-responsive transcription factor ERF010 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Lcy01g018150 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V5C8	2.5e-64	92.36	Ethylene-responsive transcription factor RAP2-1 OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S3BAR1	2.5e-64	92.36	ethylene-responsive transcription factor RAP2-1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0LR87	7.2e-64	92.36	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G356600 PE=...	[more]
A0A6J1HCJ9	2.0e-61	88.89	ethylene-responsive transcription factor RAP2-1-like OS=Cucurbita moschata OX=36...	[more]
A0A6J1KB24	4.4e-61	88.19	ethylene-responsive transcription factor RAP2-1-like OS=Cucurbita maxima OX=3661...	[more]

BLAST of Lcy01g018150 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038884237.1	7.9e-65	93.75	ethylene-responsive transcription factor RAP2-1-like [Benincasa hispida]	[more]
XP_008444599.1	5.1e-64	92.36	PREDICTED: ethylene-responsive transcription factor RAP2-1 [Cucumis melo] >KAA00...	[more]
XP_004142875.1	1.5e-63	92.36	ethylene-responsive transcription factor RAP2-1 [Cucumis sativus] >KGN62486.1 hy...	[more]
KAG7029328.1	4.0e-61	88.89	Ethylene-responsive transcription factor RAP2-1, partial [Cucurbita argyrosperma...	[more]
XP_022962377.1	4.0e-61	88.89	ethylene-responsive transcription factor RAP2-1-like [Cucurbita moschata] >XP_02...	[more]

BLAST of Lcy01g018150 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G46768.1	8.7e-38	59.06	related to AP2 1	[more]
AT2G23340.1	3.4e-34	54.73	DREB and EAR motif protein 3	[more]
AT3G50260.1	3.4e-34	56.93	cooperatively regulated by ethylene and jasmonate 1	[more]
AT4G06746.1	4.5e-34	61.54	related to AP2 9	[more]
AT5G67190.1	2.2e-33	71.28	DREB and EAR motif protein 2	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 63..83 score: 52.99 coord: 25..36 score: 64.24
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 24..87 e-value: 1.2E-35 score: 134.4
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 25..73 e-value: 2.0E-11 score: 44.0
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 24..81 score: 22.128345
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 25..83 e-value: 1.81996E-28 score: 97.3422
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 24..82 e-value: 5.6E-25 score: 89.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 116..144
None	No IPR available	PANTHER	PTHR31729:SF2	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED	coord: 10..142
None	No IPR available	PANTHER	PTHR31729	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED	coord: 10..142
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 24..82

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy01g018150.1	Lcy01g018150.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity