Lcy01g017750 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy01g017750
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	calmodulin-like
Location	Chr01: 39213588 .. 39214386 (-)
RNA-Seq Expression	Lcy01g017750
Synteny	Lcy01g017750

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTCCTCCTTTTACAATGTCACTCTATAAACTTCCTTTTAGAAGCCAAGAAGAAGTAGATGAATTCTTCAAGATGTATGACAAAAATGGTGATGGTGTTATCACCAAAGAGGAGCTGCTTGAAGGGCCTATGGTCGGCTCAAAGGCTCATCAAGAGCCAAAAAACCAACCAAAACCCAAACCCAACAAGGTTAGCTCAAATATTCTTCATGTAGAGCCGAAAAAGAAGCTTGAAGACAAAGCCCAAAAAGCCCCAGCAAGAGCCTTGCAAAGAAAGAATTCGAGTCTGCGTTATCTAAGTCGAGAACAGATGAAGGAGATTTTTAGAGAGCATGATATCGACGGTGATGGTTTCCTCGACTTCGGCGAGCTAACAAGGGCATTTGGTTTCTTAGACTCAATTCTTCCATTCTATAAAGCACGCAATGGCTTGACTTGCGCAGATGCTAATGGAGATGGGCTTATCGGCGAGGATGAGCTTGACGAACTCGTCAACTTTGCTGAAAAACTTTACAAGAAGTGAGTTAAAGAGATGTTCTTGATGGATCTCATCTTATGATACACGGATCTAAGAAATGTATTCAATACATATTTGAAAATATTGCAATTTTTTTTTTTTTTTTGGAGAAAGGTAAAAATTTTATAACGCCATATGGACAATCGATGAACGGTCAGAATTGACCAAGATAACCATCCAACTTGGGATAGAAAAAACCCAAGACTCACTAAGTCTAAACTCTCTAGCTCTCTTAGCTATATAGTCTGCTATCATATTACATGATCTTGAAATGTAACAAAAA

mRNA sequence

AGTCCTCCTTTTACAATGTCACTCTATAAACTTCCTTTTAGAAGCCAAGAAGAAGTAGATGAATTCTTCAAGATGTATGACAAAAATGGTGATGGTGTTATCACCAAAGAGGAGCTGCTTGAAGGGCCTATGGTCGGCTCAAAGGCTCATCAAGAGCCAAAAAACCAACCAAAACCCAAACCCAACAAGGTTAGCTCAAATATTCTTCATGTAGAGCCGAAAAAGAAGCTTGAAGACAAAGCCCAAAAAGCCCCAGCAAGAGCCTTGCAAAGAAAGAATTCGAGTCTGCGTTATCTAAGTCGAGAACAGATGAAGGAGATTTTTAGAGAGCATGATATCGACGGTGATGGTTTCCTCGACTTCGGCGAGCTAACAAGGGCATTTGGTTTCTTAGACTCAATTCTTCCATTCTATAAAGCACGCAATGGCTTGACTTGCGCAGATGCTAATGGAGATGGGCTTATCGGCGAGGATGAGCTTGACGAACTCGTCAACTTTGCTGAAAAACTTTACAAGAAGTGAGTTAAAGAGATGTTCTTGATGGATCTCATCTTATGATACACGGATCTAAGAAATGTATTCAATACATATTTGAAAATATTGCAATTTTTTTTTTTTTTTTGGAGAAAGGTAAAAATTTTATAACGCCATATGGACAATCGATGAACGGTCAGAATTGACCAAGATAACCATCCAACTTGGGATAGAAAAAACCCAAGACTCACTAAGTCTAAACTCTCTAGCTCTCTTAGCTATATAGTCTGCTATCATATTACATGATCTTGAAATGTAACAAAAA

Coding sequence (CDS)

ATGTCACTCTATAAACTTCCTTTTAGAAGCCAAGAAGAAGTAGATGAATTCTTCAAGATGTATGACAAAAATGGTGATGGTGTTATCACCAAAGAGGAGCTGCTTGAAGGGCCTATGGTCGGCTCAAAGGCTCATCAAGAGCCAAAAAACCAACCAAAACCCAAACCCAACAAGGTTAGCTCAAATATTCTTCATGTAGAGCCGAAAAAGAAGCTTGAAGACAAAGCCCAAAAAGCCCCAGCAAGAGCCTTGCAAAGAAAGAATTCGAGTCTGCGTTATCTAAGTCGAGAACAGATGAAGGAGATTTTTAGAGAGCATGATATCGACGGTGATGGTTTCCTCGACTTCGGCGAGCTAACAAGGGCATTTGGTTTCTTAGACTCAATTCTTCCATTCTATAAAGCACGCAATGGCTTGACTTGCGCAGATGCTAATGGAGATGGGCTTATCGGCGAGGATGAGCTTGACGAACTCGTCAACTTTGCTGAAAAACTTTACAAGAAGTGA

Protein sequence

MSLYKLPFRSQEEVDEFFKMYDKNGDGVITKEELLEGPMVGSKAHQEPKNQPKPKPNKVSSNILHVEPKKKLEDKAQKAPARALQRKNSSLRYLSREQMKEIFREHDIDGDGFLDFGELTRAFGFLDSILPFYKARNGLTCADANGDGLIGEDELDELVNFAEKLYKK

Homology

[Close]

BLAST of Lcy01g017750 vs. ExPASy TrEMBL
Match: A0A6J1KUW2 (calmodulin-like OS=Cucurbita maxima OX=3661 GN=LOC111496626 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 3.7e-27
Identity = 76/159 (47.80%), Postives = 100/159 (62.89%), Query Frame = 0


Query: 10  SQEEVDEFFKMYDKNGDGVITKEELLEGPMVGSKAHQEPKNQPKPKPNKVSSNILHVEPK 69
           ++ E  EF + YDKN D  ++KEEL       +  H + KN    KP            K
Sbjct: 16  AEAEAQEFIQNYDKNADSSLSKEEL-----SAAIHHNQAKNPGSHKPE---------AKK 75

Query: 70  KKLEDKAQKAPARALQRKNSSLRYLSREQMKEIFREHDIDGDGFLDFGELTRAFGFLDSI 129
           K +  KAQK PA+A + K +S++ LSR Q+KEIF EHDIDGDG+L   ELT+AF F  SI
Sbjct: 76  KDVAPKAQKVPAKAAEEKGASMK-LSRSQIKEIFMEHDIDGDGYLSVSELTKAFSFFGSI 135

Query: 130 LPFYKARNGLTCADANGDGLIGEDELDELVNFAEKLYKK 169
           +P YKA  GL  ADA+GDGLI E+EL++LV++AE+  KK
Sbjct: 136 IPLYKAHYGLAYADADGDGLISEEELEKLVDYAERTNKK 159

[Close]

BLAST of Lcy01g017750 vs. ExPASy TrEMBL
Match: A0A6J1GK16 (calmodulin-like OS=Cucurbita moschata OX=3662 GN=LOC111454616 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 6.9e-26
Identity = 74/159 (46.54%), Postives = 98/159 (61.64%), Query Frame = 0


Query: 10  SQEEVDEFFKMYDKNGDGVITKEELLEGPMVGSKAHQEPKNQPKPKPNKVSSNILHVEPK 69
           ++ E  E  + YDKN D  ++KEEL       +  H + KN     P            K
Sbjct: 16  AEAEAQELMQNYDKNADSSLSKEEL-----SAAIHHNQAKNPGSHNPE---------AKK 75

Query: 70  KKLEDKAQKAPARALQRKNSSLRYLSREQMKEIFREHDIDGDGFLDFGELTRAFGFLDSI 129
           K +  KAQK PA+A + K +S++ LSR Q+KEIF EHDIDGDG+L   ELT+AF F  SI
Sbjct: 76  KDVAPKAQKVPAKAAEEKGASMK-LSRSQIKEIFMEHDIDGDGYLSVSELTKAFSFFGSI 135

Query: 130 LPFYKARNGLTCADANGDGLIGEDELDELVNFAEKLYKK 169
           +P YKA  GL  ADA+GDGLI E+EL++LV++AE+  KK
Sbjct: 136 IPLYKAHYGLAYADADGDGLISEEELEKLVDYAERTNKK 159

[Close]

BLAST of Lcy01g017750 vs. ExPASy TrEMBL
Match: A0A6J1KM01 (probable calcium-binding protein CML11 OS=Cucurbita maxima OX=3661 GN=LOC111496473 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 1.2e-25
Identity = 79/176 (44.89%), Postives = 112/176 (63.64%), Query Frame = 0


Query: 1   MSLYKLPFRSQEEVDEFFKMYDKNGDGVITKEEL---LEGPMVGSKAHQEPKNQPKPKPN 60
           MS+  L   ++ E +E  K YDKNGDG++TKEEL   L      ++ + +      PK N
Sbjct: 1   MSVSILQTWAENEANELMKKYDKNGDGILTKEELQVFLRDVRGSTQLNYQGFLSKIPKTN 60

Query: 61  -----KVSSNILHVEPKKKLEDKAQKAPARALQRKNSSLRYLSREQMKEIFREHDIDGDG 120
                K+SSN  H  PK +++DK  K+  + L  K S++  LSREQ+K+IF+ +D D DG
Sbjct: 61  DKGAHKLSSN-THTNPKIQVQDKVTKSSTKVLSEKVSNVS-LSREQIKKIFKYYDSDKDG 120

Query: 121 FLDFGELTRAFGFLDSILPFYKARNGLTCADANGDGLIGEDELDELVNFAEKLYKK 169
           FL+  E+T+AF FL SI PFYKA+  +T ADAN DGLI E EL++L+++A K+ KK
Sbjct: 121 FLNIREVTKAFSFLGSINPFYKAQYAMTFADANNDGLISETELEKLIDYACKIIKK 174

[Close]

BLAST of Lcy01g017750 vs. ExPASy TrEMBL
Match: A0A6J1KK48 (probable calcium-binding protein CML14 OS=Cucurbita maxima OX=3661 GN=LOC111496448 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 2.0e-25
Identity = 81/176 (46.02%), Postives = 112/176 (63.64%), Query Frame = 0


Query: 1   MSLYKLPFRSQEEVDEFFKMYDKNGDGVITKEEL--LEGPMVGSKAHQEP---KNQPKPK 60
           MS+  L   ++ E +E  K YD+NGDGV+TKEEL   +  + GS          N PK  
Sbjct: 1   MSVSILQAWAENEANELMKKYDRNGDGVLTKEELQVFQRDVRGSTQLNNQGFLSNIPKTN 60

Query: 61  ---PNKVSSNILHVEPKKKLEDKAQKAPARALQRKNSSLRYLSREQMKEIFREHDIDGDG 120
               NK+SSN  H  PK +++DKA K+  +A   K S++R LSREQ+K+IF+ +D D DG
Sbjct: 61  DKGANKLSSN-AHTNPKIQVQDKATKSSTKAPSEKVSNVR-LSREQIKKIFKYYDSDKDG 120

Query: 121 FLDFGELTRAFGFLDSILPFYKARNGLTCADANGDGLIGEDELDELVNFAEKLYKK 169
           FL+  E+T+AF FL SI PFYKA+  +T  DAN D LI E EL++L+++A K+ KK
Sbjct: 121 FLNIREVTKAFSFLGSINPFYKAQYAMTFVDANNDSLINEAELEKLIDYACKIIKK 174

[Close]

BLAST of Lcy01g017750 vs. ExPASy TrEMBL
Match: A0A6J1KUA8 (calcium-binding protein H-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111496471 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 1.0e-24
Identity = 78/176 (44.32%), Postives = 104/176 (59.09%), Query Frame = 0


Query: 1   MSLYKLPFRSQEEVDEFFKMYDKNGDGVITKEELLEGPMVGSKAHQEPKNQ------PKP 60
           MS  K    +++E +   K YD NGDG++TKEEL         + Q   NQ      PK 
Sbjct: 1   MSASKFQTWAEDEANRLMKKYDTNGDGMLTKEELQVFLHKARGSKQLNNNQGFVFKIPKA 60

Query: 61  KPNKV--SSNILHVEPKKKLEDKAQKAPARALQRKNSSLRYLSREQMKEIFREHDIDGDG 120
             N     S+  H++ KK+++DK +K+  +    + S LR LSREQMKEIF+ HD + DG
Sbjct: 61  NNNVAHEHSSNSHMKHKKQVQDKGKKSSTKFFDGEMSKLR-LSREQMKEIFKNHDSNKDG 120

Query: 121 FLDFGELTRAFGFLDSILPFYKARNGLTCADANGDGLIGEDELDELVNFAEKLYKK 169
           FLD  E+T+AFGFL SILPF KA   +  AD N DGLI E ELD+L+++A K   K
Sbjct: 121 FLDIKEVTKAFGFLGSILPFNKAHYAMAYADTNHDGLISEFELDKLIDYASKFINK 175

[Close]

BLAST of Lcy01g017750 vs. NCBI nr
Match: XP_023002888.1 (calmodulin-like [Cucurbita maxima])

HSP 1 Score: 131.3 bits (329), Expect = 7.6e-27
Identity = 76/159 (47.80%), Postives = 100/159 (62.89%), Query Frame = 0


Query: 10  SQEEVDEFFKMYDKNGDGVITKEELLEGPMVGSKAHQEPKNQPKPKPNKVSSNILHVEPK 69
           ++ E  EF + YDKN D  ++KEEL       +  H + KN    KP            K
Sbjct: 16  AEAEAQEFIQNYDKNADSSLSKEEL-----SAAIHHNQAKNPGSHKPE---------AKK 75

Query: 70  KKLEDKAQKAPARALQRKNSSLRYLSREQMKEIFREHDIDGDGFLDFGELTRAFGFLDSI 129
           K +  KAQK PA+A + K +S++ LSR Q+KEIF EHDIDGDG+L   ELT+AF F  SI
Sbjct: 76  KDVAPKAQKVPAKAAEEKGASMK-LSRSQIKEIFMEHDIDGDGYLSVSELTKAFSFFGSI 135

Query: 130 LPFYKARNGLTCADANGDGLIGEDELDELVNFAEKLYKK 169
           +P YKA  GL  ADA+GDGLI E+EL++LV++AE+  KK
Sbjct: 136 IPLYKAHYGLAYADADGDGLISEEELEKLVDYAERTNKK 159

[Close]

BLAST of Lcy01g017750 vs. NCBI nr
Match: XP_022951879.1 (calmodulin-like [Cucurbita moschata] >XP_023537873.1 calmodulin-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 127.1 bits (318), Expect = 1.4e-25
Identity = 74/159 (46.54%), Postives = 98/159 (61.64%), Query Frame = 0


Query: 10  SQEEVDEFFKMYDKNGDGVITKEELLEGPMVGSKAHQEPKNQPKPKPNKVSSNILHVEPK 69
           ++ E  E  + YDKN D  ++KEEL       +  H + KN     P            K
Sbjct: 16  AEAEAQELMQNYDKNADSSLSKEEL-----SAAIHHNQAKNPGSHNPE---------AKK 75

Query: 70  KKLEDKAQKAPARALQRKNSSLRYLSREQMKEIFREHDIDGDGFLDFGELTRAFGFLDSI 129
           K +  KAQK PA+A + K +S++ LSR Q+KEIF EHDIDGDG+L   ELT+AF F  SI
Sbjct: 76  KDVAPKAQKVPAKAAEEKGASMK-LSRSQIKEIFMEHDIDGDGYLSVSELTKAFSFFGSI 135

Query: 130 LPFYKARNGLTCADANGDGLIGEDELDELVNFAEKLYKK 169
           +P YKA  GL  ADA+GDGLI E+EL++LV++AE+  KK
Sbjct: 136 IPLYKAHYGLAYADADGDGLISEEELEKLVDYAERTNKK 159

[Close]

BLAST of Lcy01g017750 vs. NCBI nr
Match: XP_023002691.1 (probable calcium-binding protein CML11 [Cucurbita maxima])

HSP 1 Score: 126.3 bits (316), Expect = 2.4e-25
Identity = 79/176 (44.89%), Postives = 112/176 (63.64%), Query Frame = 0


Query: 1   MSLYKLPFRSQEEVDEFFKMYDKNGDGVITKEEL---LEGPMVGSKAHQEPKNQPKPKPN 60
           MS+  L   ++ E +E  K YDKNGDG++TKEEL   L      ++ + +      PK N
Sbjct: 1   MSVSILQTWAENEANELMKKYDKNGDGILTKEELQVFLRDVRGSTQLNYQGFLSKIPKTN 60

Query: 61  -----KVSSNILHVEPKKKLEDKAQKAPARALQRKNSSLRYLSREQMKEIFREHDIDGDG 120
                K+SSN  H  PK +++DK  K+  + L  K S++  LSREQ+K+IF+ +D D DG
Sbjct: 61  DKGAHKLSSN-THTNPKIQVQDKVTKSSTKVLSEKVSNVS-LSREQIKKIFKYYDSDKDG 120

Query: 121 FLDFGELTRAFGFLDSILPFYKARNGLTCADANGDGLIGEDELDELVNFAEKLYKK 169
           FL+  E+T+AF FL SI PFYKA+  +T ADAN DGLI E EL++L+++A K+ KK
Sbjct: 121 FLNIREVTKAFSFLGSINPFYKAQYAMTFADANNDGLISETELEKLIDYACKIIKK 174

[Close]

BLAST of Lcy01g017750 vs. NCBI nr
Match: XP_023002657.1 (probable calcium-binding protein CML14 [Cucurbita maxima])

HSP 1 Score: 125.6 bits (314), Expect = 4.2e-25
Identity = 81/176 (46.02%), Postives = 112/176 (63.64%), Query Frame = 0


Query: 1   MSLYKLPFRSQEEVDEFFKMYDKNGDGVITKEEL--LEGPMVGSKAHQEP---KNQPKPK 60
           MS+  L   ++ E +E  K YD+NGDGV+TKEEL   +  + GS          N PK  
Sbjct: 1   MSVSILQAWAENEANELMKKYDRNGDGVLTKEELQVFQRDVRGSTQLNNQGFLSNIPKTN 60

Query: 61  ---PNKVSSNILHVEPKKKLEDKAQKAPARALQRKNSSLRYLSREQMKEIFREHDIDGDG 120
               NK+SSN  H  PK +++DKA K+  +A   K S++R LSREQ+K+IF+ +D D DG
Sbjct: 61  DKGANKLSSN-AHTNPKIQVQDKATKSSTKAPSEKVSNVR-LSREQIKKIFKYYDSDKDG 120

Query: 121 FLDFGELTRAFGFLDSILPFYKARNGLTCADANGDGLIGEDELDELVNFAEKLYKK 169
           FL+  E+T+AF FL SI PFYKA+  +T  DAN D LI E EL++L+++A K+ KK
Sbjct: 121 FLNIREVTKAFSFLGSINPFYKAQYAMTFVDANNDSLINEAELEKLIDYACKIIKK 174

[Close]

BLAST of Lcy01g017750 vs. NCBI nr
Match: XP_038886759.1 (probable calcium-binding protein CML11 [Benincasa hispida])

HSP 1 Score: 125.2 bits (313), Expect = 5.4e-25
Identity = 78/178 (43.82%), Postives = 108/178 (60.67%), Query Frame = 0


Query: 1   MSLYKLPFRSQEEVDEFFKMYDKNGDGVITKEEL-------LEGPMVGSKAHQEPKNQPK 60
           MS+ +L   ++ E +E  K YD+NGDGV+ KEEL            + +      +  PK
Sbjct: 1   MSVSQLQAWAENEANELIKKYDRNGDGVLAKEELQSFLHDTCSSTQLNNTRCVLSRMIPK 60

Query: 61  PKPN---KVSSNILHVEPKKKLEDKAQKAPARALQRKNSSLRYLSREQMKEIFREHDIDG 120
              N   K+SSN  H+  KK+L DK Q +  +AL RK S++   SREQ+KEIF+ HD + 
Sbjct: 61  TNNNLVHKLSSN-THMNQKKQLRDKIQNSSTKALDRKQSNIP-PSREQIKEIFKYHDSNK 120

Query: 121 DGFLDFGELTRAFGFLDSILPFYKARNGLTCADANGDGLIGEDELDELVNFAEKLYKK 169
           DGFL+  ELT+ FG L S++PFYKA   +  ADA+ DGLI E ELDEL+++  K+ KK
Sbjct: 121 DGFLNIRELTKTFGSLGSVIPFYKAHYAMAYADADKDGLISEVELDELIDYTNKIIKK 176

[Close]

BLAST of Lcy01g017750 vs. TAIR 10
Match: AT1G32250.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 43.5 bits (101), Expect = 1.9e-04
Identity = 44/163 (26.99%), Postives = 72/163 (44.17%), Query Frame = 0


Query: 5   KLPFRSQEEVDEFFKMYDKNGDGVITKEELLEGPMVGSKAHQEPKNQPKPKPNKVSSNIL 64
           KL      E+ E F+ +D+N DG +T+ EL  G ++ +          KP P++  + I 
Sbjct: 8   KLDEEQINELREIFRSFDRNKDGSLTQLEL--GSLLRALG-------VKPSPDQFETLID 67

Query: 65  HVEPKKK-----LEDKAQKAPARALQRKNSSLRYLSREQMKEIFREHDIDGDGFLDFGEL 124
             + K        E  A  +P      K ++    + EQ+  +FR  D DG+GF+   EL
Sbjct: 68  KADTKSNGLVEFPEFVALVSPELLSPAKRTT--PYTEEQLLRLFRIFDTDGNGFITAAEL 127

Query: 125 TRAFGFLDSILPFYKARNGLTCADANGDGLIGEDELDELVNFA 163
             +   L   L   +    +  AD++GDG I   E  + +N A
Sbjct: 128 AHSMAKLGHALTVAELTGMIKEADSDGDGRINFQEFAKAINSA 159

[Close]

BLAST of Lcy01g017750 vs. TAIR 10
Match: AT1G18530.1 (EF hand calcium-binding protein family )

HSP 1 Score: 43.5 bits (101), Expect = 1.9e-04
Identity = 22/66 (33.33%), Postives = 35/66 (53.03%), Query Frame = 0


Query: 94  LSREQMKEIFREHDIDGDGFLDFGELTRAFGFLDSILPFYKARNGLTCADANGDGLIGED 153
           ++ EQ+ EIF+  D DG+GF+   EL  A   +   L + +    +  AD NGDG+I   
Sbjct: 78  INSEQLLEIFKSFDRDGNGFISAAELAGAMAKMGQPLTYKELTEMIKEADTNGDGVISFG 137

Query: 154 ELDELV 160
           E   ++
Sbjct: 138 EFASIM 143

The following BLAST results are available for this feature:

BLAST of Lcy01g017750 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy01g017750 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KUW2	3.7e-27	47.80	calmodulin-like OS=Cucurbita maxima OX=3661 GN=LOC111496626 PE=4 SV=1	[more]
A0A6J1GK16	6.9e-26	46.54	calmodulin-like OS=Cucurbita moschata OX=3662 GN=LOC111454616 PE=4 SV=1	[more]
A0A6J1KM01	1.2e-25	44.89	probable calcium-binding protein CML11 OS=Cucurbita maxima OX=3661 GN=LOC1114964...	[more]
A0A6J1KK48	2.0e-25	46.02	probable calcium-binding protein CML14 OS=Cucurbita maxima OX=3661 GN=LOC1114964...	[more]
A0A6J1KUA8	1.0e-24	44.32	calcium-binding protein H-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]

BLAST of Lcy01g017750 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023002888.1	7.6e-27	47.80	calmodulin-like [Cucurbita maxima]	[more]
XP_022951879.1	1.4e-25	46.54	calmodulin-like [Cucurbita moschata] >XP_023537873.1 calmodulin-like [Cucurbita ...	[more]
XP_023002691.1	2.4e-25	44.89	probable calcium-binding protein CML11 [Cucurbita maxima]	[more]
XP_023002657.1	4.2e-25	46.02	probable calcium-binding protein CML14 [Cucurbita maxima]	[more]
XP_038886759.1	5.4e-25	43.82	probable calcium-binding protein CML11 [Benincasa hispida]	[more]

BLAST of Lcy01g017750 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G32250.1	1.9e-04	26.99	Calcium-binding EF-hand family protein	[more]
AT1G18530.1	1.9e-04	33.33	EF hand calcium-binding protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 98..126 e-value: 0.016 score: 24.4 coord: 13..43 e-value: 7.7E-4 score: 28.8
IPR002048	EF-hand domain	PFAM	PF13202	EF-hand_5	coord: 141..159 e-value: 0.019 score: 14.4
IPR002048	EF-hand domain	PFAM	PF00036	EF-hand_1	coord: 13..36 e-value: 6.2E-8 score: 31.7 coord: 99..123 e-value: 1.9E-6 score: 27.0
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 9..44 score: 13.871811
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 94..129 score: 14.039183
None	No IPR available	GENE3D	1.10.238.10		coord: 42..166 e-value: 6.9E-11 score: 44.4
None	No IPR available	GENE3D	1.10.238.10		coord: 9..40 e-value: 8.7E-8 score: 33.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..63
None	No IPR available	PANTHER	PTHR10891:SF911	SUBFAMILY NOT NAMED	coord: 83..164
None	No IPR available	PANTHER	PTHR10891	EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN	coord: 83..164
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 107..119
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 22..34
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 143..155
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 11..159

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy01g017750.1	Lcy01g017750.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding