Lcy01g017380 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy01g017380
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	RING-type domain-containing protein
Location	Chr01: 38871041 .. 38873554 (+)
RNA-Seq Expression	Lcy01g017380
Synteny	Lcy01g017380

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCGTGAAGCTTCCATCTTCAAACGTATATTTTCAGCATTTCTGTCAGACGCGTTCGTCTTCGGTTTCAGATTCTCTTCTTCATCGATCGGAACGCGGGATCGGCCGGTTTGTTCTTCTCAATCAATAGGTCCGTGTTTTCATTTTTCCGATTCTTTTTGTAATTGTATTTTGATTTCTGAGTTTTTTTCTTTTTGTTGGATTGTTCGCATTGAATTTGATTCTGTTGGTCTCTGTTTTGGGATTTTGAAACCCTAGGATTTGAGATTTGGCTGTATATTTCCCGCTTGTGTTGTTCTGCTGGTCGATCCATTGTTAAGATTGTTGATTTTCTTTAGGTTCTCCCATTGGTTTTTGTTGGTCGAAGGACTATTTCCGACCCCGAAGATTTTTTTTTCTGTTGACTTTCGTGGATTTCTTTCTCTTATCTCAACTTTGTGGTTTAATGTGATTTAATAGGTAGGGCGTGTAGAAATGTCTAGCGGGTTTGGGGAATCGACGAGTAGGCAACCCCAAAGCCCTTCGTGTTCCGACAACAATGGTGATGCTAGTAATTTTGAGTGCAATATTTGCCTGGATTTAGCTCAAGATCCTATTGTAACCCTATGCGGTCATCTTTTTTGTTGGCCATGCCTTTATAAGTGGCTGCACATTCATTCCCATCCCCAGGAATGTCCAGTTTGTAAGGCTATCATAGAAGAGCAAAAATTGGTTCCCTTATATGGTAGGGGAAAGACATCGACTGACCCGAGATCGAAAAGTATTCCAGGGATTAATATTCCTAATCGTCCTGCGGGACAGAGACCTGAAGCAGCAGGTCCTCCCCCTGAACCAAATCCTTTTCCTCACAATGGGTTTGGATTCATGGGAGGTCTTGGAGGGTTTGCCCCAATGGCGTCGACGAGGTTTGGTAATTTTACATTGTCTGCAGCTTTTGGTGGTCTTGTCCCATCTTTATTCAACTTTCAGATGCATGGATATGCAGATCCAAGCATGTATGGTGCAGGTGCTAACTTTCCTTATGGGTTTCCTAACATGTTTCATGGTAGCCATGGTCACGCCCATGGATACTATCACCATCTCCGTCAAGGTCAGCAAGATTATTACCTGAAGCGGCTGTTTTTGTTTATTGGTTTCTGTGTTCTTCTTGCCCTAATCTGGCAATAGATGAAAGAGTCTATTAGGGCTTATATTGCTTCGTGGTGTTTAGTGTATTTAATCTCTAATGTAAGAATTAAAAAGAAAATCTGATGGTACATTGTCTTGATACCTCATCATTCGTCCTAATTAGTCTTACTGTATGTTGAAATGGACATCGACTTTTATATGTTTAGGCATGGTGAACATTAGTTGATGCAATTGTATTTGAAGGTTTCGATTTCTGCACATATATATATTCATTTACATGCTGACCCACCAAATGCAATCACATGGCAGAGTGAACAAAACACATGCTGTGATGGCTTTTTCTCTCTAAGATGATTTATTTGCCTAAGTGGTTTCTCTAGTGCTCTTACCTAATGCACTACTTGCAGCATGTGTTTCCTGTTTTTTCTTTGGTCGATATATCTAGGCTGATTTTGGTGAAGAAGATAGGGTGCGAATGTGTTGCTGCTGCACATGGTGTTAGTAAGTATACCAAAAACTTGGTTATTAAATAGTGTCTGGATGTGGTTCTATCGATGTCTATTGTTTCAATTAACAATTCTAGCTTGGTATTTGTTTCGTTTTCTCAATCTTGCACTAGCTTCATGTACCATGTCATTTCATTATATGATAGAAAGGGAGCAGGATCGGGATCAGGATCATCCCCTGTTGCCATGTTGGGAACTAGTAGGTTGGTGTTCTAGCTTTCAAGGTCTTTTTTGTTTAATTTATAGGGAGTCAACTAACCAAAGGGGGATCTTTTAGCTGGATGATAGTTGACCATGTTTATCAGAAGTGTGCAGAGAAGAAGTATAAAGTGCAGTGGCTTGTAGTGTTCAATTGTCTGATGTTAATATTTTTTTTCTTAAGCCTGGAGTATTATGTTAGGATGTGGCGATTGTGGGTCCAATGAAATATTTAACACCCCTTCATCTGGCAAAGGTTAGCATTTAGTGGTTTATGCTAGTTGATACGTTATTTATTTTTGTCTGTTACTTTGTTATTGTTTATCTTTTGAAGGCCAGACGATGTCAAAATTTCTCAGAATGCATTTTCTTTTCCTTTTTAAAGTTTAGCTCCTAGCTTCATTTTAGAAAATAATTTGCAAGCCTGTTTTAGAGATGTCAATTGGGGGGTGGGGGGATTGTCTCCCTATCCCCGCTCCCAAATCATCCCGTTAAATTTTGCGAGAATCGGAATGAGTTGTGTGAAAATGGGAATGGAAATGAGGAGTGCAATCCATTCCCCCACCCTTTGTCTCACAGGGTGATAGGGCCCTATCGTAGAAAGGAAGAATTGAGGTTTTTTCTTTTTTGAGTCTAGGGATTCGAACTTTAGACCTCTTGATCGAAGATACATATCAATTGTAT

mRNA sequence

GCGTGAAGCTTCCATCTTCAAACGTATATTTTCAGCATTTCTGTCAGACGCGTTCGTCTTCGGTTTCAGATTCTCTTCTTCATCGATCGGAACGCGGGATCGGCCGGTTTGTTCTTCTCAATCAATAGGTAGGGCGTGTAGAAATGTCTAGCGGGTTTGGGGAATCGACGAGTAGGCAACCCCAAAGCCCTTCGTGTTCCGACAACAATGGTGATGCTAGTAATTTTGAGTGCAATATTTGCCTGGATTTAGCTCAAGATCCTATTGTAACCCTATGCGGTCATCTTTTTTGTTGGCCATGCCTTTATAAGTGGCTGCACATTCATTCCCATCCCCAGGAATGTCCAGTTTGTAAGGCTATCATAGAAGAGCAAAAATTGGTTCCCTTATATGGTAGGGGAAAGACATCGACTGACCCGAGATCGAAAAGTATTCCAGGGATTAATATTCCTAATCGTCCTGCGGGACAGAGACCTGAAGCAGCAGGTCCTCCCCCTGAACCAAATCCTTTTCCTCACAATGGGTTTGGATTCATGGGAGGTCTTGGAGGGTTTGCCCCAATGGCGTCGACGAGGTTTGGTAATTTTACATTGTCTGCAGCTTTTGGTGGTCTTGTCCCATCTTTATTCAACTTTCAGATGCATGGATATGCAGATCCAAGCATGTATGGTGCAGGTGCTAACTTTCCTTATGGGTTTCCTAACATGTTTCATGGTAGCCATGGTCACGCCCATGGATACTATCACCATCTCCGTCAAGGTCAGCAAGATTATTACCTGAAGCGGCTGTTTTTGTTTATTGGTTTCTGTGTTCTTCTTGCCCTAATCTGGCAATAGATGAAAGAGTCTATTAGGGCTTATATTGCTTCGTGGTGTTTAGTGTATTTAATCTCTAATGTAAGAATTAAAAAGAAAATCTGATGGTACATTGTCTTGATACCTCATCATTCGTCCTAATTAGTCTTACTGTATGTTGAAATGGACATCGACTTTTATATGTTTAGGCATGGTGAACATTAGTTGATGCAATTGTATTTGAAGGTTTCGATTTCTGCACATATATATATTCATTTACATGCTGACCCACCAAATGCAATCACATGGCAGAGTGAACAAAACACATGCTGTGATGGCTTTTTCTCTCTAAGATGATTTATTTGCCTAAGTGGTTTCTCTAGTGCTCTTACCTAATGCACTACTTGCAGCATGTGTTTCCTGTTTTTTCTTTGGTCGATATATCTAGGCTGATTTTGGTGAAGAAGATAGGGTGCGAATGTGTTGCTGCTGCACATGGTGTTAGTAAGTATACCAAAAACTTGGTTATTAAATAGTGTCTGGATGTGGTTCTATCGATGTCTATTGTTTCAATTAACAATTCTAGCTTGGTATTTGTTTCGTTTTCTCAATCTTGCACTAGCTTCATGTACCATGTCATTTCATTATATGATAGAAAGGGAGCAGGATCGGGATCAGGATCATCCCCTGTTGCCATGTTGGGAACTAGTAGGTTGGTGTTCTAGCTTTCAAGGTCTTTTTTGTTTAATTTATAGGGAGTCAACTAACCAAAGGGGGATCTTTTAGCTGGATGATAGTTGACCATGTTTATCAGAAGTGTGCAGAGAAGAAGTATAAAGTGCAGTGGCTTGTAGTGTTCAATTGTCTGATGTTAATATTTTTTTTCTTAAGCCTGGAGTATTATGTTAGGATGTGGCGATTGTGGGTCCAATGAAATATTTAACACCCCTTCATCTGGCAAAGGTTAGCATTTAGTGGTTTATGCTAGTTGATACGTTATTTATTTTTGTCTGTTACTTTGTTATTGTTTATCTTTTGAAGGCCAGACGATGTCAAAATTTCTCAGAATGCATTTTCTTTTCCTTTTTAAAGTTTAGCTCCTAGCTTCATTTTAGAAAATAATTTGCAAGCCTGTTTTAGAGATGTCAATTGGGGGGTGGGGGGATTGTCTCCCTATCCCCGCTCCCAAATCATCCCGTTAAATTTTGCGAGAATCGGAATGAGTTGTGTGAAAATGGGAATGGAAATGAGGAGTGCAATCCATTCCCCCACCCTTTGTCTCACAGGGTGATAGGGCCCTATCGTAGAAAGGAAGAATTGAGGTTTTTTCTTTTTTGAGTCTAGGGATTCGAACTTTAGACCTCTTGATCGAAGATACATATCAATTGTAT

Coding sequence (CDS)

ATGTCTAGCGGGTTTGGGGAATCGACGAGTAGGCAACCCCAAAGCCCTTCGTGTTCCGACAACAATGGTGATGCTAGTAATTTTGAGTGCAATATTTGCCTGGATTTAGCTCAAGATCCTATTGTAACCCTATGCGGTCATCTTTTTTGTTGGCCATGCCTTTATAAGTGGCTGCACATTCATTCCCATCCCCAGGAATGTCCAGTTTGTAAGGCTATCATAGAAGAGCAAAAATTGGTTCCCTTATATGGTAGGGGAAAGACATCGACTGACCCGAGATCGAAAAGTATTCCAGGGATTAATATTCCTAATCGTCCTGCGGGACAGAGACCTGAAGCAGCAGGTCCTCCCCCTGAACCAAATCCTTTTCCTCACAATGGGTTTGGATTCATGGGAGGTCTTGGAGGGTTTGCCCCAATGGCGTCGACGAGGTTTGGTAATTTTACATTGTCTGCAGCTTTTGGTGGTCTTGTCCCATCTTTATTCAACTTTCAGATGCATGGATATGCAGATCCAAGCATGTATGGTGCAGGTGCTAACTTTCCTTATGGGTTTCCTAACATGTTTCATGGTAGCCATGGTCACGCCCATGGATACTATCACCATCTCCGTCAAGGTCAGCAAGATTATTACCTGAAGCGGCTGTTTTTGTTTATTGGTTTCTGTGTTCTTCTTGCCCTAATCTGGCAATAG

Protein sequence

MSSGFGESTSRQPQSPSCSDNNGDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHIHSHPQECPVCKAIIEEQKLVPLYGRGKTSTDPRSKSIPGINIPNRPAGQRPEAAGPPPEPNPFPHNGFGFMGGLGGFAPMASTRFGNFTLSAAFGGLVPSLFNFQMHGYADPSMYGAGANFPYGFPNMFHGSHGHAHGYYHHLRQGQQDYYLKRLFLFIGFCVLLALIWQ

Homology

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BLAST of Lcy01g017380 vs. ExPASy Swiss-Prot
Match: Q09463 (E3 ubiquitin ligase rnf-5 OS=Caenorhabditis elegans OX=6239 GN=rnf-5 PE=1 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.5e-31
Identity = 90/242 (37.19%), Postives = 121/242 (50.00%), Query Frame = 0


Query: 9   TSRQPQSPSCSDNNGDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHIHSHPQECP 68
           T    + P+ S N  +++ FECNICLD A+D +V+LCGHLFCWPCL +WL    + Q CP
Sbjct: 5   TKAPSEEPTSSSNKDESARFECNICLDAAKDAVVSLCGHLFCWPCLSQWLDTRPNNQVCP 64

Query: 69  VCKAIIEEQKLVPLYGRGKTSTDPRSKSIPGINIPNRPAGQRPEAAGPPPEPNPFPHNGF 128
           VCK+ I+  K+VP+YGRG  S+DPR K      +P RP GQR E     P P  F    +
Sbjct: 65  VCKSAIDGNKVVPIYGRGGDSSDPRKK------VPPRPKGQRSE-----PPPQSFAGFNW 124

Query: 129 GFMGG-LGGFAPMASTRFGNFTLSAAF---------GGLVPSLFNFQMHGYADPSMYGAG 188
           G  GG +GG  P     FG  T++  F          G+ P  F     G  +     AG
Sbjct: 125 GGDGGMMGGGGPNVHFSFGIGTVNGLFPLMFMLPFIQGIFPLSFVASFFGNGNQGAAAAG 184

Query: 189 ANFPYGFPNMFHGSHGHAHGYYH-----------HLRQGQQDYYLKRLFLFIGFCVLLAL 230
                G      G+H H HG+ H             R  Q++ YL  +F +IGF +L  L
Sbjct: 185 GGNGGGNDGN-DGTHAHTHGHTHGPRGHGESAAPGSRMAQEEEYLSNIFKYIGFFMLFWL 234

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BLAST of Lcy01g017380 vs. ExPASy Swiss-Prot
Match: Q5ZIR9 (E3 ubiquitin-protein ligase RNF185 OS=Gallus gallus OX=9031 GN=RNF185 PE=2 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 3.1e-26
Identity = 67/130 (51.54%), Postives = 78/130 (60.00%), Query Frame = 0


Query: 9   TSRQPQSPSCSDNNGDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHIHSHPQECP 68
           TS    S    DN    + FECNICLD A+D +++LCGHLFCWPCL++WL    + Q CP
Sbjct: 20  TSGSSSSNGAGDNTNQDNTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCP 79

Query: 69  VCKAIIEEQKLVPLYGRGKT-STDPRSKSIPGINIPNRPAGQRPEAAGPPPEPNPFPHNG 128
           VCKA I   K++PLYGRG T   DPR K+      P RP GQRPE     PE N     G
Sbjct: 80  VCKAGISRDKVIPLYGRGSTGQQDPREKT------PPRPQGQRPE-----PE-NRGGFQG 135

Query: 129 FGFMGGLGGF 138
           FGF  G GGF
Sbjct: 140 FGF--GDGGF 135

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BLAST of Lcy01g017380 vs. ExPASy Swiss-Prot
Match: Q96GF1 (E3 ubiquitin-protein ligase RNF185 OS=Homo sapiens OX=9606 GN=RNF185 PE=1 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.2e-25
Identity = 72/143 (50.35%), Postives = 84/143 (58.74%), Query Frame = 0


Query: 6   GESTSRQPQS-----PSCSDN-----NGDASNFECNICLDLAQDPIVTLCGHLFCWPCLY 65
           G S S  P++     PS S N      G  S FECNICLD A+D +++LCGHLFCWPCL+
Sbjct: 5   GPSASASPENSSAGGPSGSSNGAGESGGQDSTFECNICLDTAKDAVISLCGHLFCWPCLH 64

Query: 66  KWLHIHSHPQECPVCKAIIEEQKLVPLYGRGKT-STDPRSKSIPGINIPNRPAGQRPEAA 125
           +WL    + Q CPVCKA I   K++PLYGRG T   DPR K+      P RP GQRPE  
Sbjct: 65  QWLETRPNRQVCPVCKAGISRDKVIPLYGRGSTGQQDPREKT------PPRPQGQRPE-- 124

Query: 126 GPPPEPNPFPHNGFGFMGGLGGF 138
              PE N     GFGF  G GGF
Sbjct: 125 ---PE-NRGGFQGFGF--GDGGF 133

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BLAST of Lcy01g017380 vs. ExPASy Swiss-Prot
Match: Q5RFK9 (E3 ubiquitin-protein ligase RNF185 OS=Pongo abelii OX=9601 GN=RNF185 PE=2 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.2e-25
Identity = 72/143 (50.35%), Postives = 84/143 (58.74%), Query Frame = 0


Query: 6   GESTSRQPQS-----PSCSDN-----NGDASNFECNICLDLAQDPIVTLCGHLFCWPCLY 65
           G S S  P++     PS S N      G  S FECNICLD A+D +++LCGHLFCWPCL+
Sbjct: 5   GPSASSSPENSSAGGPSGSSNGAGESGGQDSTFECNICLDTAKDAVISLCGHLFCWPCLH 64

Query: 66  KWLHIHSHPQECPVCKAIIEEQKLVPLYGRGKT-STDPRSKSIPGINIPNRPAGQRPEAA 125
           +WL    + Q CPVCKA I   K++PLYGRG T   DPR K+      P RP GQRPE  
Sbjct: 65  QWLETRPNRQVCPVCKAGISRDKVIPLYGRGSTGQQDPREKT------PPRPQGQRPE-- 124

Query: 126 GPPPEPNPFPHNGFGFMGGLGGF 138
              PE N     GFGF  G GGF
Sbjct: 125 ---PE-NRGGFQGFGF--GDGGF 133

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BLAST of Lcy01g017380 vs. ExPASy Swiss-Prot
Match: Q91YT2 (E3 ubiquitin-protein ligase RNF185 OS=Mus musculus OX=10090 GN=Rnf185 PE=2 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.6e-25
Identity = 65/124 (52.42%), Postives = 77/124 (62.10%), Query Frame = 0


Query: 15  SPSCSDNNGDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHIHSHPQECPVCKAII 74
           S    ++ G  S FECNICLD A+D +++LCGHLFCWPCL++WL    + Q CPVCKA I
Sbjct: 24  SNGTGESGGQDSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGI 83

Query: 75  EEQKLVPLYGRGKT-STDPRSKSIPGINIPNRPAGQRPEAAGPPPEPNPFPHNGFGFMGG 134
              K++PLYGRG T   DPR K+      P RP GQRPE     PE N     GFGF  G
Sbjct: 84  SRDKVIPLYGRGSTGQQDPREKT------PPRPQGQRPE-----PE-NRGGFQGFGF--G 133

Query: 135 LGGF 138
            GGF
Sbjct: 144 DGGF 133

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BLAST of Lcy01g017380 vs. ExPASy TrEMBL
Match: A0A6J1KA44 (E3 ubiquitin-protein ligase RNF185-like OS=Cucurbita maxima OX=3661 GN=LOC111492032 PE=4 SV=1)

HSP 1 Score: 474.6 bits (1220), Expect = 2.4e-130
Identity = 224/230 (97.39%), Postives = 225/230 (97.83%), Query Frame = 0


Query: 1   MSSGFGESTSRQPQSPSCSDNNGDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHI 60
           MS GFGESTSRQPQ PS SDNNGDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHI
Sbjct: 1   MSRGFGESTSRQPQGPSYSDNNGDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHI 60

Query: 61  HSHPQECPVCKAIIEEQKLVPLYGRGKTSTDPRSKSIPGINIPNRPAGQRPEAAGPPPEP 120
           HSHPQECPVCKA+IEEQKLVPLYGRGKTSTDPRSKSIPGINIPNRPAGQRPEAAGPPPEP
Sbjct: 61  HSHPQECPVCKALIEEQKLVPLYGRGKTSTDPRSKSIPGINIPNRPAGQRPEAAGPPPEP 120

Query: 121 NPFPHNGFGFMGGLGGFAPMASTRFGNFTLSAAFGGLVPSLFNFQMHGYADPSMYGAGAN 180
           NPFPHNGFGFMGGLGGFAPMASTRFGNFTLSAAFGGLVPSLFNFQMHGYADPSMYGAGAN
Sbjct: 121 NPFPHNGFGFMGGLGGFAPMASTRFGNFTLSAAFGGLVPSLFNFQMHGYADPSMYGAGAN 180

Query: 181 FPYGFPNMFHGSHGHAHGYYHHLRQGQQDYYLKRLFLFIGFCVLLALIWQ 231
            PYGFPNMFHGSHGHAHGYYHHLRQGQQDYYLKRL LFIGFCVLLALIWQ
Sbjct: 181 VPYGFPNMFHGSHGHAHGYYHHLRQGQQDYYLKRLLLFIGFCVLLALIWQ 230

[Close]

BLAST of Lcy01g017380 vs. ExPASy TrEMBL
Match: A0A6J1HCN0 (E3 ubiquitin-protein ligase RNF185-like OS=Cucurbita moschata OX=3662 GN=LOC111462860 PE=4 SV=1)

HSP 1 Score: 474.2 bits (1219), Expect = 3.2e-130
Identity = 223/230 (96.96%), Postives = 226/230 (98.26%), Query Frame = 0


Query: 1   MSSGFGESTSRQPQSPSCSDNNGDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHI 60
           M+SGFGESTSRQPQ PS SDNNGDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHI
Sbjct: 1   MASGFGESTSRQPQGPSYSDNNGDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHI 60

Query: 61  HSHPQECPVCKAIIEEQKLVPLYGRGKTSTDPRSKSIPGINIPNRPAGQRPEAAGPPPEP 120
           HSHPQECPVCKA+IEEQKLVPLYGRGKTSTDPRSKSIPGINIPNRP+GQRPEAAGPPPEP
Sbjct: 61  HSHPQECPVCKALIEEQKLVPLYGRGKTSTDPRSKSIPGINIPNRPSGQRPEAAGPPPEP 120

Query: 121 NPFPHNGFGFMGGLGGFAPMASTRFGNFTLSAAFGGLVPSLFNFQMHGYADPSMYGAGAN 180
           NPFPHNGFGFMGGLGGFAPMASTRFGNFTLSAAFGGLVPSLFNFQMHGYADPSMYGAGAN
Sbjct: 121 NPFPHNGFGFMGGLGGFAPMASTRFGNFTLSAAFGGLVPSLFNFQMHGYADPSMYGAGAN 180

Query: 181 FPYGFPNMFHGSHGHAHGYYHHLRQGQQDYYLKRLFLFIGFCVLLALIWQ 231
            PYGFPNMFHGSHGHAHGYYHHLRQGQQDYYLKRL LFIGFCVLLALIWQ
Sbjct: 181 VPYGFPNMFHGSHGHAHGYYHHLRQGQQDYYLKRLLLFIGFCVLLALIWQ 230

[Close]

BLAST of Lcy01g017380 vs. ExPASy TrEMBL
Match: A0A6J1CT42 (E3 ubiquitin-protein ligase RNF185 OS=Momordica charantia OX=3673 GN=LOC111014071 PE=4 SV=1)

HSP 1 Score: 473.4 bits (1217), Expect = 5.4e-130
Identity = 223/230 (96.96%), Postives = 225/230 (97.83%), Query Frame = 0


Query: 1   MSSGFGESTSRQPQSPSCSDNNGDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHI 60
           M+SGFGESTSRQPQSPSCSDNN DASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHI
Sbjct: 1   MASGFGESTSRQPQSPSCSDNNSDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHI 60

Query: 61  HSHPQECPVCKAIIEEQKLVPLYGRGKTSTDPRSKSIPGINIPNRPAGQRPEAAGPPPEP 120
           HSHPQECPVCKAIIEEQKLVPLYGRGKTSTDPRSKSIPGINIPNRPAGQRPEAAGPPPEP
Sbjct: 61  HSHPQECPVCKAIIEEQKLVPLYGRGKTSTDPRSKSIPGINIPNRPAGQRPEAAGPPPEP 120

Query: 121 NPFPHNGFGFMGGLGGFAPMASTRFGNFTLSAAFGGLVPSLFNFQMHGYADPSMYGAGAN 180
           N FPHNGFGFMGGLGGFAPMASTRFGNFTLSAAFGGLVPSLFNFQMHGYADPSMYGAGA 
Sbjct: 121 NHFPHNGFGFMGGLGGFAPMASTRFGNFTLSAAFGGLVPSLFNFQMHGYADPSMYGAGAG 180

Query: 181 FPYGFPNMFHGSHGHAHGYYHHLRQGQQDYYLKRLFLFIGFCVLLALIWQ 231
           FPYGFPNMFHGSHGHAHGYYHHLRQGQQDYYLKRL + IGFCVLLALIWQ
Sbjct: 181 FPYGFPNMFHGSHGHAHGYYHHLRQGQQDYYLKRLLMLIGFCVLLALIWQ 230

[Close]

BLAST of Lcy01g017380 vs. ExPASy TrEMBL
Match: A0A0A0LLD2 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G360850 PE=4 SV=1)

HSP 1 Score: 473.0 bits (1216), Expect = 7.0e-130
Identity = 224/230 (97.39%), Postives = 224/230 (97.39%), Query Frame = 0


Query: 1   MSSGFGESTSRQPQSPSCSDNNGDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHI 60
           M SGFGESTSRQPQSPSCSDNNGDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHI
Sbjct: 1   MESGFGESTSRQPQSPSCSDNNGDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHI 60

Query: 61  HSHPQECPVCKAIIEEQKLVPLYGRGKTSTDPRSKSIPGINIPNRPAGQRPEAAGPPPEP 120
           HSHPQECPVCKAIIEEQKLVPLYGRGKTSTDPRSKSIPGINIPNRPAGQRPEAAGPPPEP
Sbjct: 61  HSHPQECPVCKAIIEEQKLVPLYGRGKTSTDPRSKSIPGINIPNRPAGQRPEAAGPPPEP 120

Query: 121 NPFPHNGFGFMGGLGGFAPMASTRFGNFTLSAAFGGLVPSLFNFQMHGYADPSMYGAGAN 180
           NPFPHNGFGFMGGLGGFAPMASTRFGNFTLSAAFGGLVPSLFNFQMHGYADPSMYGAGAN
Sbjct: 121 NPFPHNGFGFMGGLGGFAPMASTRFGNFTLSAAFGGLVPSLFNFQMHGYADPSMYGAGAN 180

Query: 181 FPYGFPNMFHGSHGHAHGYYHHLRQGQQDYYLKRLFLFIGFCVLLALIWQ 231
           FPYGFPNMFHGSHGHAHGYYH LRQGQQDYYLKRL   IGF VLLALIWQ
Sbjct: 181 FPYGFPNMFHGSHGHAHGYYHQLRQGQQDYYLKRLLFLIGFFVLLALIWQ 230

[Close]

BLAST of Lcy01g017380 vs. ExPASy TrEMBL
Match: A0A6J1GGW7 (RING finger protein 5 OS=Cucurbita moschata OX=3662 GN=LOC111454080 PE=4 SV=1)

HSP 1 Score: 472.6 bits (1215), Expect = 9.2e-130
Identity = 224/234 (95.73%), Postives = 227/234 (97.01%), Query Frame = 0


Query: 1   MSSGFGESTSRQPQSPSCSDNNGDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHI 60
           M+SGFGESTSRQPQSPSCSDNNGDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHI
Sbjct: 1   MASGFGESTSRQPQSPSCSDNNGDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHI 60

Query: 61  HSHPQECPVCKAIIEEQKLVPLYGRGKTSTDPRSKSIPGINIPNRPAGQRPEAAGPPPEP 120
           HSHPQECPVCKA+IEEQKLVPLYGRGKTSTDPRSKSIPG+NIPNRPAGQRPEAAGPPPEP
Sbjct: 61  HSHPQECPVCKAMIEEQKLVPLYGRGKTSTDPRSKSIPGVNIPNRPAGQRPEAAGPPPEP 120

Query: 121 NPFPHNGFGFMGGLGGFAPMASTRFGNFTLSAAFGGLVPSLFNFQMHGYADPSMYGAGAN 180
           NPF HNGFGFMGGLGGFAPMASTRFGNFTLSAAFGGLVPSLFNFQMHGYADPSMYGAGAN
Sbjct: 121 NPFAHNGFGFMGGLGGFAPMASTRFGNFTLSAAFGGLVPSLFNFQMHGYADPSMYGAGAN 180

Query: 181 FPYGFPNMFHGSHG----HAHGYYHHLRQGQQDYYLKRLFLFIGFCVLLALIWQ 231
           FPYGFPNMFHGSHG    HAHGYYHHLRQGQQDYYLKRL  FIGFCVLLALIWQ
Sbjct: 181 FPYGFPNMFHGSHGHGHAHAHGYYHHLRQGQQDYYLKRLLFFIGFCVLLALIWQ 234

[Close]

BLAST of Lcy01g017380 vs. NCBI nr
Match: XP_038884023.1 (E3 ubiquitin ligase rnf-5 [Benincasa hispida])

HSP 1 Score: 481.5 bits (1238), Expect = 4.1e-132
Identity = 227/230 (98.70%), Postives = 228/230 (99.13%), Query Frame = 0


Query: 1   MSSGFGESTSRQPQSPSCSDNNGDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHI 60
           M+SGFGESTSRQPQSPSCSDNNGDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHI
Sbjct: 1   MASGFGESTSRQPQSPSCSDNNGDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHI 60

Query: 61  HSHPQECPVCKAIIEEQKLVPLYGRGKTSTDPRSKSIPGINIPNRPAGQRPEAAGPPPEP 120
           HSHPQECPVCKAIIEEQKLVPLYGRGKTSTDPRSKSIPGINIPNRPAGQRPEAAGPPPEP
Sbjct: 61  HSHPQECPVCKAIIEEQKLVPLYGRGKTSTDPRSKSIPGINIPNRPAGQRPEAAGPPPEP 120

Query: 121 NPFPHNGFGFMGGLGGFAPMASTRFGNFTLSAAFGGLVPSLFNFQMHGYADPSMYGAGAN 180
           NPFPHNGFGFMGGLGGFAPMASTRFGNFTLSAAFGGLVPSLFNFQMHGYADPSMYGAGAN
Sbjct: 121 NPFPHNGFGFMGGLGGFAPMASTRFGNFTLSAAFGGLVPSLFNFQMHGYADPSMYGAGAN 180

Query: 181 FPYGFPNMFHGSHGHAHGYYHHLRQGQQDYYLKRLFLFIGFCVLLALIWQ 231
           FPYGFPNMFHGSHGHAHGYYH LRQGQQDYYLKRL LFIGFCVLLALIWQ
Sbjct: 181 FPYGFPNMFHGSHGHAHGYYHQLRQGQQDYYLKRLLLFIGFCVLLALIWQ 230

[Close]

BLAST of Lcy01g017380 vs. NCBI nr
Match: KAG6598412.1 (E3 ubiquitin ligase rnf-5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 475.3 bits (1222), Expect = 2.9e-130
Identity = 224/230 (97.39%), Postives = 226/230 (98.26%), Query Frame = 0


Query: 1   MSSGFGESTSRQPQSPSCSDNNGDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHI 60
           M+SGFGESTSRQPQ PS SDNNGDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHI
Sbjct: 17  MASGFGESTSRQPQGPSYSDNNGDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHI 76

Query: 61  HSHPQECPVCKAIIEEQKLVPLYGRGKTSTDPRSKSIPGINIPNRPAGQRPEAAGPPPEP 120
           HSHPQECPVCKA+IEEQKLVPLYGRGKTSTDPRSKSIPGINIPNRPAGQRPEAAGPPPEP
Sbjct: 77  HSHPQECPVCKALIEEQKLVPLYGRGKTSTDPRSKSIPGINIPNRPAGQRPEAAGPPPEP 136

Query: 121 NPFPHNGFGFMGGLGGFAPMASTRFGNFTLSAAFGGLVPSLFNFQMHGYADPSMYGAGAN 180
           NPFPHNGFGFMGGLGGFAPMASTRFGNFTLSAAFGGLVPSLFNFQMHGYADPSMYGAGAN
Sbjct: 137 NPFPHNGFGFMGGLGGFAPMASTRFGNFTLSAAFGGLVPSLFNFQMHGYADPSMYGAGAN 196

Query: 181 FPYGFPNMFHGSHGHAHGYYHHLRQGQQDYYLKRLFLFIGFCVLLALIWQ 231
            PYGFPNMFHGSHGHAHGYYHHLRQGQQDYYLKRL LFIGFCVLLALIWQ
Sbjct: 197 VPYGFPNMFHGSHGHAHGYYHHLRQGQQDYYLKRLLLFIGFCVLLALIWQ 246

[Close]

BLAST of Lcy01g017380 vs. NCBI nr
Match: XP_023547002.1 (E3 ubiquitin-protein ligase RNF185-like [Cucurbita pepo subsp. pepo] >XP_023547003.1 E3 ubiquitin-protein ligase RNF185-like [Cucurbita pepo subsp. pepo] >KAG7029364.1 RING finger protein 5, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 475.3 bits (1222), Expect = 2.9e-130
Identity = 224/230 (97.39%), Postives = 226/230 (98.26%), Query Frame = 0


Query: 1   MSSGFGESTSRQPQSPSCSDNNGDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHI 60
           M+SGFGESTSRQPQ PS SDNNGDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHI
Sbjct: 1   MASGFGESTSRQPQGPSYSDNNGDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHI 60

Query: 61  HSHPQECPVCKAIIEEQKLVPLYGRGKTSTDPRSKSIPGINIPNRPAGQRPEAAGPPPEP 120
           HSHPQECPVCKA+IEEQKLVPLYGRGKTSTDPRSKSIPGINIPNRPAGQRPEAAGPPPEP
Sbjct: 61  HSHPQECPVCKALIEEQKLVPLYGRGKTSTDPRSKSIPGINIPNRPAGQRPEAAGPPPEP 120

Query: 121 NPFPHNGFGFMGGLGGFAPMASTRFGNFTLSAAFGGLVPSLFNFQMHGYADPSMYGAGAN 180
           NPFPHNGFGFMGGLGGFAPMASTRFGNFTLSAAFGGLVPSLFNFQMHGYADPSMYGAGAN
Sbjct: 121 NPFPHNGFGFMGGLGGFAPMASTRFGNFTLSAAFGGLVPSLFNFQMHGYADPSMYGAGAN 180

Query: 181 FPYGFPNMFHGSHGHAHGYYHHLRQGQQDYYLKRLFLFIGFCVLLALIWQ 231
            PYGFPNMFHGSHGHAHGYYHHLRQGQQDYYLKRL LFIGFCVLLALIWQ
Sbjct: 181 VPYGFPNMFHGSHGHAHGYYHHLRQGQQDYYLKRLLLFIGFCVLLALIWQ 230

[Close]

BLAST of Lcy01g017380 vs. NCBI nr
Match: XP_022996954.1 (E3 ubiquitin-protein ligase RNF185-like [Cucurbita maxima] >XP_022996955.1 E3 ubiquitin-protein ligase RNF185-like [Cucurbita maxima])

HSP 1 Score: 474.6 bits (1220), Expect = 5.0e-130
Identity = 224/230 (97.39%), Postives = 225/230 (97.83%), Query Frame = 0


Query: 1   MSSGFGESTSRQPQSPSCSDNNGDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHI 60
           MS GFGESTSRQPQ PS SDNNGDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHI
Sbjct: 1   MSRGFGESTSRQPQGPSYSDNNGDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHI 60

Query: 61  HSHPQECPVCKAIIEEQKLVPLYGRGKTSTDPRSKSIPGINIPNRPAGQRPEAAGPPPEP 120
           HSHPQECPVCKA+IEEQKLVPLYGRGKTSTDPRSKSIPGINIPNRPAGQRPEAAGPPPEP
Sbjct: 61  HSHPQECPVCKALIEEQKLVPLYGRGKTSTDPRSKSIPGINIPNRPAGQRPEAAGPPPEP 120

Query: 121 NPFPHNGFGFMGGLGGFAPMASTRFGNFTLSAAFGGLVPSLFNFQMHGYADPSMYGAGAN 180
           NPFPHNGFGFMGGLGGFAPMASTRFGNFTLSAAFGGLVPSLFNFQMHGYADPSMYGAGAN
Sbjct: 121 NPFPHNGFGFMGGLGGFAPMASTRFGNFTLSAAFGGLVPSLFNFQMHGYADPSMYGAGAN 180

Query: 181 FPYGFPNMFHGSHGHAHGYYHHLRQGQQDYYLKRLFLFIGFCVLLALIWQ 231
            PYGFPNMFHGSHGHAHGYYHHLRQGQQDYYLKRL LFIGFCVLLALIWQ
Sbjct: 181 VPYGFPNMFHGSHGHAHGYYHHLRQGQQDYYLKRLLLFIGFCVLLALIWQ 230

[Close]

BLAST of Lcy01g017380 vs. NCBI nr
Match: XP_022962412.1 (E3 ubiquitin-protein ligase RNF185-like [Cucurbita moschata] >XP_022962413.1 E3 ubiquitin-protein ligase RNF185-like [Cucurbita moschata])

HSP 1 Score: 474.2 bits (1219), Expect = 6.5e-130
Identity = 223/230 (96.96%), Postives = 226/230 (98.26%), Query Frame = 0


Query: 1   MSSGFGESTSRQPQSPSCSDNNGDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHI 60
           M+SGFGESTSRQPQ PS SDNNGDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHI
Sbjct: 1   MASGFGESTSRQPQGPSYSDNNGDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHI 60

Query: 61  HSHPQECPVCKAIIEEQKLVPLYGRGKTSTDPRSKSIPGINIPNRPAGQRPEAAGPPPEP 120
           HSHPQECPVCKA+IEEQKLVPLYGRGKTSTDPRSKSIPGINIPNRP+GQRPEAAGPPPEP
Sbjct: 61  HSHPQECPVCKALIEEQKLVPLYGRGKTSTDPRSKSIPGINIPNRPSGQRPEAAGPPPEP 120

Query: 121 NPFPHNGFGFMGGLGGFAPMASTRFGNFTLSAAFGGLVPSLFNFQMHGYADPSMYGAGAN 180
           NPFPHNGFGFMGGLGGFAPMASTRFGNFTLSAAFGGLVPSLFNFQMHGYADPSMYGAGAN
Sbjct: 121 NPFPHNGFGFMGGLGGFAPMASTRFGNFTLSAAFGGLVPSLFNFQMHGYADPSMYGAGAN 180

Query: 181 FPYGFPNMFHGSHGHAHGYYHHLRQGQQDYYLKRLFLFIGFCVLLALIWQ 231
            PYGFPNMFHGSHGHAHGYYHHLRQGQQDYYLKRL LFIGFCVLLALIWQ
Sbjct: 181 VPYGFPNMFHGSHGHAHGYYHHLRQGQQDYYLKRLLLFIGFCVLLALIWQ 230

[Close]

BLAST of Lcy01g017380 vs. TAIR 10
Match: AT1G19310.1 (RING/U-box superfamily protein )

HSP 1 Score: 292.4 bits (747), Expect = 3.3e-79
Identity = 146/220 (66.36%), Postives = 170/220 (77.27%), Query Frame = 0


Query: 16  PSCSD----NNGDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHIHSHPQECPVCK 75
           PSCS     NN D+SNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLH+HS  ++CPVCK
Sbjct: 5   PSCSSGNDTNNNDSSNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHLHSQSKDCPVCK 64

Query: 76  AIIEEQKLVPLYGRGKTSTDPRSKSIPGINIPNRPAGQRPEAAGPPPEPNPFPHNGFGFM 135
           A+IEE +LVPLYGRGK+S DPRSKSIPG+ +PNRP+GQRPE A PP   + F H+  GF 
Sbjct: 65  AVIEEDRLVPLYGRGKSSADPRSKSIPGLEVPNRPSGQRPETAQPPDPNHGFAHH-HGFG 124

Query: 136 GGLGGF-APMASTRFGNFTLSAAFGGLVPSLFNFQMHGYADPSMYGAGAN--FPYGFPNM 195
           G +GGF APMAS RFGN TLSAAFGGL+PSLFN   HG+ D +MYGA A+  FP+GF N 
Sbjct: 125 GFMGGFAAPMASARFGNVTLSAAFGGLIPSLFNLHFHGFPDAAMYGAAASGGFPHGFSNP 184

Query: 196 FHGSHGHAHGYYHHL-RQGQQDYYLKRLFLFIGFCVLLAL 228
           FHG H H H Y  H  RQGQQD++L+ L L +   V+ +L
Sbjct: 185 FHGGHSHMHSYQRHTGRQGQQDHHLRILLLIVFVVVVFSL 223

[Close]

BLAST of Lcy01g017380 vs. TAIR 10
Match: AT2G23780.1 (RING/U-box superfamily protein )

HSP 1 Score: 253.1 bits (645), Expect = 2.2e-67
Identity = 130/230 (56.52%), Postives = 160/230 (69.57%), Query Frame = 0


Query: 6   GESTSRQPQSPSCSDNNGDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHIHSHPQ 65
           GES++    S S +D N    +FECNIC +LAQDPIVTLCGHLFCWPCLY+WLH HSH Q
Sbjct: 4   GESSTSTSYSDSNNDTNDQGGDFECNICFELAQDPIVTLCGHLFCWPCLYRWLHHHSHSQ 63

Query: 66  ECPVCKAIIEEQKLVPLYGRGKTSTDPRSKSIPGINIPNRPAGQRPEAAGPPPEP---NP 125
           ECPVCKA++++ KLVPLYGRGK  TDPRSK  PG+ IPNRP GQRPE A PPP+P   + 
Sbjct: 64  ECPVCKAVVQDDKLVPLYGRGKNQTDPRSKRYPGLRIPNRPTGQRPETAAPPPQPEAASN 123

Query: 126 FPHNGFGFMGGLGGFAPMASTRFGNFTLSAAFGGLVPSLFNFQMHGYADPSMYGAGANFP 185
           F + G G MGG+     MA+TRFGNF  S  FGGL+PSLFNFQ HG+ D ++YG+   +P
Sbjct: 124 FFNYGIGLMGGI--MPMMATTRFGNF--SMGFGGLLPSLFNFQFHGFHDATLYGSTPGYP 183

Query: 186 Y-GFPNMFHGSHGHAHGYYHHLRQG--QQDYYLKRLFLFIGFCVLLALIW 230
           Y G+ N F G      G    + +G  Q D +LK +  F+G CV++ LIW
Sbjct: 184 YGGYHNGFRGV--PPRGQERPMARGGNQSDAFLKNILFFVGICVVIFLIW 227

[Close]

BLAST of Lcy01g017380 vs. TAIR 10
Match: AT1G74990.1 (RING/U-box superfamily protein )

HSP 1 Score: 157.1 bits (396), Expect = 1.6e-38
Identity = 76/133 (57.14%), Postives = 91/133 (68.42%), Query Frame = 0


Query: 19  SDNNGDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHIHSHPQECPVCKAIIEEQK 78
           ++ +  ++NF CNICL+LA++PIVTLCGHLFCWPCLYKWLH HS    CPVCKA+++E  
Sbjct: 8   NEEDDASNNFGCNICLELAREPIVTLCGHLFCWPCLYKWLHYHSKSNHCPVCKALVKEDT 67

Query: 79  LVPLYGRGKTSTDPRSKSIPGINIPNRPAGQRPEAAGPPPEPNPFPHNGFGFMGGLGGFA 138
           LVPLYG GK S+DPRSK   G+ +PNRPA  R E A P  E     H+G  F GG   FA
Sbjct: 68  LVPLYGMGKPSSDPRSKLNSGVTVPNRPAATRTETARPRLEQR---HHGSSFFGGHSSFA 127

Query: 139 PM-ASTRFGNFTL 151
            M    RF NF L
Sbjct: 128 AMPTGLRFSNFLL 137

[Close]

BLAST of Lcy01g017380 vs. TAIR 10
Match: AT4G03510.1 (RING membrane-anchor 1 )

HSP 1 Score: 97.4 bits (241), Expect = 1.5e-20
Identity = 72/233 (30.90%), Postives = 111/233 (47.64%), Query Frame = 0


Query: 7   ESTSRQPQSPSCSDNNGDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHIHS---- 66
           +S   +P + S   ++ D SNF+CNICLD  Q+P+VTLCGHLFCWPC++KWL + S    
Sbjct: 25  KSKKPEPITVSVPSDDTDDSNFDCNICLDSVQEPVVTLCGHLFCWPCIHKWLDVQSFSTS 84

Query: 67  ----HPQECPVCKAIIEEQKLVPLYGRGKTSTDPRSKSIPGINIPNRPAG--QRPEAAGP 126
                 ++CPVCK+ +    LVPLYGRG+ +T    K+    ++P RP G   R E    
Sbjct: 85  DEYQRHRQCPVCKSKVSHSTLVPLYGRGRCTTQEEGKN----SVPKRPVGPVYRLEMPNS 144

Query: 127 PPEPNPFP-HNGFGFMGGLGGFAPMASTRFGNFTLSAAFGGLVPSLFNFQMHGYADPSMY 186
           P             F     G+ P++     N   S ++  ++  +    +       ++
Sbjct: 145 PYASTDLRLSQRVHFNSPQEGYYPVSGVMSSN---SLSYSAVLDPVM-VMVGEMVATRLF 204

Query: 187 GAGANFPYGFPNMFHGSHGHAHGYYHHLRQGQQDYYLKRLFLFIGFCVLLALI 229
           G      + +P+ +  +     G     R  Q D  L R+F F   CV+L L+
Sbjct: 205 GTRVMDRFAYPDTY--NLAGTSGPRMRRRIMQADKSLGRIFFFFMCCVVLCLL 247

[Close]

BLAST of Lcy01g017380 vs. TAIR 10
Match: AT4G03510.2 (RING membrane-anchor 1 )

HSP 1 Score: 97.4 bits (241), Expect = 1.5e-20
Identity = 72/233 (30.90%), Postives = 111/233 (47.64%), Query Frame = 0


Query: 7   ESTSRQPQSPSCSDNNGDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHIHS---- 66
           +S   +P + S   ++ D SNF+CNICLD  Q+P+VTLCGHLFCWPC++KWL + S    
Sbjct: 25  KSKKPEPITVSVPSDDTDDSNFDCNICLDSVQEPVVTLCGHLFCWPCIHKWLDVQSFSTS 84

Query: 67  ----HPQECPVCKAIIEEQKLVPLYGRGKTSTDPRSKSIPGINIPNRPAG--QRPEAAGP 126
                 ++CPVCK+ +    LVPLYGRG+ +T    K+    ++P RP G   R E    
Sbjct: 85  DEYQRHRQCPVCKSKVSHSTLVPLYGRGRCTTQEEGKN----SVPKRPVGPVYRLEMPNS 144

Query: 127 PPEPNPFP-HNGFGFMGGLGGFAPMASTRFGNFTLSAAFGGLVPSLFNFQMHGYADPSMY 186
           P             F     G+ P++     N   S ++  ++  +    +       ++
Sbjct: 145 PYASTDLRLSQRVHFNSPQEGYYPVSGVMSSN---SLSYSAVLDPVM-VMVGEMVATRLF 204

Query: 187 GAGANFPYGFPNMFHGSHGHAHGYYHHLRQGQQDYYLKRLFLFIGFCVLLALI 229
           G      + +P+ +  +     G     R  Q D  L R+F F   CV+L L+
Sbjct: 205 GTRVMDRFAYPDTY--NLAGTSGPRMRRRIMQADKSLGRIFFFFMCCVVLCLL 247

The following BLAST results are available for this feature:

BLAST of Lcy01g017380 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q09463	1.5e-31	37.19	E3 ubiquitin ligase rnf-5 OS=Caenorhabditis elegans OX=6239 GN=rnf-5 PE=1 SV=1	[more]
Q5ZIR9	3.1e-26	51.54	E3 ubiquitin-protein ligase RNF185 OS=Gallus gallus OX=9031 GN=RNF185 PE=2 SV=1	[more]
Q96GF1	1.2e-25	50.35	E3 ubiquitin-protein ligase RNF185 OS=Homo sapiens OX=9606 GN=RNF185 PE=1 SV=1	[more]
Q5RFK9	1.2e-25	50.35	E3 ubiquitin-protein ligase RNF185 OS=Pongo abelii OX=9601 GN=RNF185 PE=2 SV=1	[more]
Q91YT2	1.6e-25	52.42	E3 ubiquitin-protein ligase RNF185 OS=Mus musculus OX=10090 GN=Rnf185 PE=2 SV=1	[more]

BLAST of Lcy01g017380 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KA44	2.4e-130	97.39	E3 ubiquitin-protein ligase RNF185-like OS=Cucurbita maxima OX=3661 GN=LOC111492...	[more]
A0A6J1HCN0	3.2e-130	96.96	E3 ubiquitin-protein ligase RNF185-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1CT42	5.4e-130	96.96	E3 ubiquitin-protein ligase RNF185 OS=Momordica charantia OX=3673 GN=LOC11101407...	[more]
A0A0A0LLD2	7.0e-130	97.39	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G360850 P...	[more]
A0A6J1GGW7	9.2e-130	95.73	RING finger protein 5 OS=Cucurbita moschata OX=3662 GN=LOC111454080 PE=4 SV=1	[more]

BLAST of Lcy01g017380 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038884023.1	4.1e-132	98.70	E3 ubiquitin ligase rnf-5 [Benincasa hispida]	[more]
KAG6598412.1	2.9e-130	97.39	E3 ubiquitin ligase rnf-5, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023547002.1	2.9e-130	97.39	E3 ubiquitin-protein ligase RNF185-like [Cucurbita pepo subsp. pepo] >XP_0235470...	[more]
XP_022996954.1	5.0e-130	97.39	E3 ubiquitin-protein ligase RNF185-like [Cucurbita maxima] >XP_022996955.1 E3 ub...	[more]
XP_022962412.1	6.5e-130	96.96	E3 ubiquitin-protein ligase RNF185-like [Cucurbita moschata] >XP_022962413.1 E3 ...	[more]

BLAST of Lcy01g017380 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G19310.1	3.3e-79	66.36	RING/U-box superfamily protein	[more]
AT2G23780.1	2.2e-67	56.52	RING/U-box superfamily protein	[more]
AT1G74990.1	1.6e-38	57.14	RING/U-box superfamily protein	[more]
AT4G03510.1	1.5e-20	30.90	RING membrane-anchor 1	[more]
AT4G03510.2	1.5e-20	30.90	RING membrane-anchor 1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 30..70 e-value: 6.4E-8 score: 42.3
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 30..71 score: 13.256433
None	No IPR available	PFAM	PF13923	zf-C3HC4_2	coord: 29..70 e-value: 1.9E-8 score: 34.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 84..122
None	No IPR available	PANTHER	PTHR12313:SF39	OS12G0636000 PROTEIN	coord: 2..230
None	No IPR available	CDD	cd16745	RING-HC_AtRMA_like	coord: 28..72 e-value: 2.39929E-30 score: 104.694
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 26..83
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 9..84 e-value: 2.8E-17 score: 63.9
IPR045103	E3 ubiquitin-protein ligase RNF5/RNF185-like	PANTHER	PTHR12313	E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED	coord: 2..230
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 45..54

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy01g017380.1	Lcy01g017380.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071712	ER-associated misfolded protein catabolic process
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0044390	ubiquitin-like protein conjugating enzyme binding
molecular_function	GO:0061630	ubiquitin protein ligase activity