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Lcy01g017140 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAAAATTCCCATCAGTCCATCATCCATTTCAAATTCCCATTTCAACTCATTGTCTCTTTTGCTTTTGTTCTCTTCTCTTCTCGCTCTCGCAATCAATTTTTCATTTTCATTTTCATTTCTATTTTCTACTTTTCTTTCATCCCTTTAATCCTAAATTCCAGTTTCTCGTCGGCTGCTGATCGATTTCGTTTCGATTTCTGTTCGAACAAGCTTCTGATTCACTGGCTATTCTAATCATCTCGACTCTGTGATTTTTCTTTTCGTTTTTTTTTTTTTGTCTGTTTGATGGGAAAGAAGAAAACCCAGAAGACTAAGCAGATTGCAGTCGCCATAGCTGAAACCTCCACCTCCAAATTACCCGATGATGGCGGCGACGGCCAATCCGTACGGCCCAGGAAGAGAGGCCGACCTCGTAAGATCCTCGATGAACCACAGAACGAACAGGATAGCCAGAAACTGCCTTCGCCGCCGCCGGAAGTTGCAGATAAACCGCAGGAGAAGAAGGCGAAAACCACCAGCGATGAGCCGCCGCCGCCGGCTTCCTTGGAAGGAGCTTCGACGCGAGAACAAGAACAGGAAGAACGCAAATCGGGAGATGGGTTGAGAAGCAGAGGAAGGCGGAAGAACAAACCCAGAAAAAGTAGCTAACGAGTAATCGAAAAAATCCTTCGATTGTTTTTCTTTTTCTTTGTT GAAAATTCCCATCAGTCCATCATCCATTTCAAATTCCCATTTCAACTCATTGTCTCTTTTGCTTTTGTTCTCTTCTCTTCTCGCTCTCGCAATCAATTTTTCATTTTCATTTTCATTTCTATTTTCTACTTTTCTTTCATCCCTTTAATCCTAAATTCCAGTTTCTCGTCGGCTGCTGATCGATTTCGTTTCGATTTCTGTTCGAACAAGCTTCTGATTCACTGGCTATTCTAATCATCTCGACTCTGTGATTTTTCTTTTCGTTTTTTTTTTTTTGTCTGTTTGATGGGAAAGAAGAAAACCCAGAAGACTAAGCAGATTGCAGTCGCCATAGCTGAAACCTCCACCTCCAAATTACCCGATGATGGCGGCGACGGCCAATCCGTACGGCCCAGGAAGAGAGGCCGACCTCGTAAGATCCTCGATGAACCACAGAACGAACAGGATAGCCAGAAACTGCCTTCGCCGCCGCCGGAAGTTGCAGATAAACCGCAGGAGAAGAAGGCGAAAACCACCAGCGATGAGCCGCCGCCGCCGGCTTCCTTGGAAGGAGCTTCGACGCGAGAACAAGAACAGGAAGAACGCAAATCGGGAGATGGGTTGAGAAGCAGAGGAAGGCGGAAGAACAAACCCAGAAAAAGTAGCTAACGAGTAATCGAAAAAATCCTTCGATTGTTTTTCTTTTTCTTTGTT ATGGGAAAGAAGAAAACCCAGAAGACTAAGCAGATTGCAGTCGCCATAGCTGAAACCTCCACCTCCAAATTACCCGATGATGGCGGCGACGGCCAATCCGTACGGCCCAGGAAGAGAGGCCGACCTCGTAAGATCCTCGATGAACCACAGAACGAACAGGATAGCCAGAAACTGCCTTCGCCGCCGCCGGAAGTTGCAGATAAACCGCAGGAGAAGAAGGCGAAAACCACCAGCGATGAGCCGCCGCCGCCGGCTTCCTTGGAAGGAGCTTCGACGCGAGAACAAGAACAGGAAGAACGCAAATCGGGAGATGGGTTGAGAAGCAGAGGAAGGCGGAAGAACAAACCCAGAAAAAGTAGCTAA MGKKKTQKTKQIAVAIAETSTSKLPDDGGDGQSVRPRKRGRPRKILDEPQNEQDSQKLPSPPPEVADKPQEKKAKTTSDEPPPPASLEGASTREQEQEERKSGDGLRSRGRRKNKPRKSS Homology
BLAST of Lcy01g017140 vs. ExPASy TrEMBL
Match: A0A6J1KLK8 (uncharacterized protein LOC111496353 OS=Cucurbita maxima OX=3661 GN=LOC111496353 PE=4 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 3.3e-30 Identity = 90/123 (73.17%), Postives = 100/123 (81.30%), Query Frame = 0
BLAST of Lcy01g017140 vs. ExPASy TrEMBL
Match: A0A5A7VIE6 (Zinc finger and BTB domain-containing protein 47 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G005800 PE=4 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 1.3e-29 Identity = 87/123 (70.73%), Postives = 99/123 (80.49%), Query Frame = 0
BLAST of Lcy01g017140 vs. ExPASy TrEMBL
Match: A0A0A0LRH2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G361610 PE=4 SV=1) HSP 1 Score: 126.3 bits (316), Expect = 8.4e-26 Identity = 80/120 (66.67%), Postives = 94/120 (78.33%), Query Frame = 0
BLAST of Lcy01g017140 vs. ExPASy TrEMBL
Match: A0A7N2KSD2 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 1.1e-06 Identity = 57/138 (41.30%), Postives = 82/138 (59.42%), Query Frame = 0
BLAST of Lcy01g017140 vs. ExPASy TrEMBL
Match: A0A2I4DSB7 (ataxin-8-like OS=Juglans regia OX=51240 GN=LOC108982990 PE=4 SV=2) HSP 1 Score: 60.1 bits (144), Expect = 7.4e-06 Identity = 50/127 (39.37%), Postives = 75/127 (59.06%), Query Frame = 0
BLAST of Lcy01g017140 vs. NCBI nr
Match: KAG7020516.1 (hypothetical protein SDJN02_17201, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 144.1 bits (362), Expect = 8.1e-31 Identity = 91/123 (73.98%), Postives = 101/123 (82.11%), Query Frame = 0
BLAST of Lcy01g017140 vs. NCBI nr
Match: XP_023002541.1 (uncharacterized protein LOC111496353 [Cucurbita maxima]) HSP 1 Score: 141.0 bits (354), Expect = 6.8e-30 Identity = 90/123 (73.17%), Postives = 100/123 (81.30%), Query Frame = 0
BLAST of Lcy01g017140 vs. NCBI nr
Match: XP_023537340.1 (uncharacterized protein LOC111798433 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 140.6 bits (353), Expect = 8.9e-30 Identity = 89/123 (72.36%), Postives = 100/123 (81.30%), Query Frame = 0
BLAST of Lcy01g017140 vs. NCBI nr
Match: KAA0065239.1 (zinc finger and BTB domain-containing protein 47 [Cucumis melo var. makuwa]) HSP 1 Score: 139.0 bits (349), Expect = 2.6e-29 Identity = 87/123 (70.73%), Postives = 99/123 (80.49%), Query Frame = 0
BLAST of Lcy01g017140 vs. NCBI nr
Match: XP_038884964.1 (uncharacterized protein LOC120075548 [Benincasa hispida]) HSP 1 Score: 136.0 bits (341), Expect = 2.2e-28 Identity = 84/120 (70.00%), Postives = 98/120 (81.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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