Lcy01g017040 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy01g017040
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	B3 domain-containing protein
Location	Chr01: 38611271 .. 38611888 (+)
RNA-Seq Expression	Lcy01g017040
Synteny	Lcy01g017040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGACCAGAGATCGACCTTTCAAACACTTTAAATCTGATCGCCGCTTTCTCTCTCGATCGAAGCTCGCGGAAGAGGAAGAACGACGCTTCTGATACGCCGAACAAGAAGGTGAAGCGAAAGGAAATGGTGTTTTCGAAGACGGTCGAGATGGCGACGGCGATGAGAGAACGGATCATCGCGATTGGCGGATTCGACATCCGAATCGTGATTCAGAAGCAATTGCAAGATACCGATCGGAGCAAGAACCACGGGCGATTATCTATTCCGATGAAGAAGCTCCTGAACGATTTCGTTACGGAAGAGGAGAGCAGATTTTTGAGCGAACAAGATGAAGAACAGAAGGAGAGGAACGGAATGAATGTGCTGATCGTGGATCCTCTGCTGAGAGAAAGCGTGATCGGATTGAAGATGTGGAAGGTCGGAAGCGGCGATATCTACTGCTTGGTGTCTGAGTGGAATTCTTTCGCGCAACGAAATTCGTTGGAAAGTGGAGATTACATTCAGCTTTGGAGTTTTAGAAAAAATGGTTTGAGGACTGAAGAAAGAGTGAGCTCTAATCTCTGCTTCGCCATGGTTAAGCTCGATATCTCTCAAGGAATCTTTCAATTTTTATGA

mRNA sequence

ATGGGACCAGAGATCGACCTTTCAAACACTTTAAATCTGATCGCCGCTTTCTCTCTCGATCGAAGCTCGCGGAAGAGGAAGAACGACGCTTCTGATACGCCGAACAAGAAGGTGAAGCGAAAGGAAATGGTGTTTTCGAAGACGGTCGAGATGGCGACGGCGATGAGAGAACGGATCATCGCGATTGGCGGATTCGACATCCGAATCGTGATTCAGAAGCAATTGCAAGATACCGATCGGAGCAAGAACCACGGGCGATTATCTATTCCGATGAAGAAGCTCCTGAACGATTTCGTTACGGAAGAGGAGAGCAGATTTTTGAGCGAACAAGATGAAGAACAGAAGGAGAGGAACGGAATGAATGTGCTGATCGTGGATCCTCTGCTGAGAGAAAGCGTGATCGGATTGAAGATGTGGAAGGTCGGAAGCGGCGATATCTACTGCTTGGTGTCTGAGTGGAATTCTTTCGCGCAACGAAATTCGTTGGAAAGTGGAGATTACATTCAGCTTTGGAGTTTTAGAAAAAATGGTTTGAGGACTGAAGAAAGAGTGAGCTCTAATCTCTGCTTCGCCATGGTTAAGCTCGATATCTCTCAAGGAATCTTTCAATTTTTATGA

Coding sequence (CDS)

ATGGGACCAGAGATCGACCTTTCAAACACTTTAAATCTGATCGCCGCTTTCTCTCTCGATCGAAGCTCGCGGAAGAGGAAGAACGACGCTTCTGATACGCCGAACAAGAAGGTGAAGCGAAAGGAAATGGTGTTTTCGAAGACGGTCGAGATGGCGACGGCGATGAGAGAACGGATCATCGCGATTGGCGGATTCGACATCCGAATCGTGATTCAGAAGCAATTGCAAGATACCGATCGGAGCAAGAACCACGGGCGATTATCTATTCCGATGAAGAAGCTCCTGAACGATTTCGTTACGGAAGAGGAGAGCAGATTTTTGAGCGAACAAGATGAAGAACAGAAGGAGAGGAACGGAATGAATGTGCTGATCGTGGATCCTCTGCTGAGAGAAAGCGTGATCGGATTGAAGATGTGGAAGGTCGGAAGCGGCGATATCTACTGCTTGGTGTCTGAGTGGAATTCTTTCGCGCAACGAAATTCGTTGGAAAGTGGAGATTACATTCAGCTTTGGAGTTTTAGAAAAAATGGTTTGAGGACTGAAGAAAGAGTGAGCTCTAATCTCTGCTTCGCCATGGTTAAGCTCGATATCTCTCAAGGAATCTTTCAATTTTTATGA

Protein sequence

MGPEIDLSNTLNLIAAFSLDRSSRKRKNDASDTPNKKVKRKEMVFSKTVEMATAMRERIIAIGGFDIRIVIQKQLQDTDRSKNHGRLSIPMKKLLNDFVTEEESRFLSEQDEEQKERNGMNVLIVDPLLRESVIGLKMWKVGSGDIYCLVSEWNSFAQRNSLESGDYIQLWSFRKNGLRTEERVSSNLCFAMVKLDISQGIFQFL

Homology

[Close]

BLAST of Lcy01g017040 vs. ExPASy Swiss-Prot
Match: Q5RM09 (B3 domain-containing protein At1g05920 OS=Arabidopsis thaliana OX=3702 GN=At1g05920 PE=2 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 9.3e-14
Identity = 47/137 (34.31%), Postives = 70/137 (51.09%), Query Frame = 0


Query: 63  GGFDIRIVIQKQLQDTDRSKNHGRLSIPMKKLL-NDFVTEEESRFLSEQDEEQKERNGMN 122
           G  D +++I+K L   D      RLSIP+  ++ NDF+T +ESR + E +   +   G+ 
Sbjct: 176 GAGDPKLIIEKNLDSNDVDPRQNRLSIPINTVIQNDFLTLDESRLIDEDEITNEGNMGVA 235

Query: 123 VLIVDPLLRESVIGLKMW--KVGSGDIY---CLVSEWNSFAQRNSLESGDYIQLWSFRKN 182
             +VD   ++  +G K W     SG  Y    L  EW++  + N L+ GD I LWSFR N
Sbjct: 236 AFLVDQRTKKWNMGFKQWFMTTDSGSSYWSFVLRGEWSNVVETNGLKEGDKISLWSFRSN 295

Query: 183 GLRTEERVSSNLCFAMV 194
            +         LCFA+V
Sbjct: 296 DI---------LCFALV 303

[Close]

BLAST of Lcy01g017040 vs. ExPASy Swiss-Prot
Match: Q9LSF7 (B3 domain-containing protein At3g25182 OS=Arabidopsis thaliana OX=3702 GN=At3g25182 PE=2 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.0e-12
Identity = 47/133 (35.34%), Postives = 72/133 (54.14%), Query Frame = 0


Query: 66  DIRIVIQKQLQDTDRSKNHGRLSIPMKKLL-NDFVTEEESRFLSEQDEEQKERNGMNVLI 125
           D +++ +K L  TD +    RLS+P   LL NDF+T  ESR + ++D +  ++ G+  ++
Sbjct: 212 DAKLIFEKTLFVTDVNPTQNRLSMPFNNLLRNDFLTSVESRII-DKDIKNDKKIGVGAIL 271

Query: 126 VDPLLRESVIGLKMWKV----GSGD-IYCLVSEWNSFAQRNSLESGDYIQLWSFRKNGLR 185
           VD   ++  + LK W++    G G   Y L+  WN   + N L+ GD I LWSFR  G+ 
Sbjct: 272 VDQRCKKWGVMLKRWEMKKESGKGSWNYNLICGWNDIVEANGLKEGDNISLWSFRSCGI- 331

Query: 186 TEERVSSNLCFAM 193
                   LCFAM
Sbjct: 332 --------LCFAM 334

[Close]

BLAST of Lcy01g017040 vs. ExPASy Swiss-Prot
Match: Q9SCJ8 (Putative B3 domain-containing protein At3g49610 OS=Arabidopsis thaliana OX=3702 GN=At3g49610 PE=3 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 3.0e-12
Identity = 57/182 (31.32%), Postives = 91/182 (50.00%), Query Frame = 0


Query: 25  KRKNDASDTPNKKVKRKEMVFSKTVEMATAMRERIIAIGGFD--IRIVIQKQLQDTDRSK 84
           KRK   S   +KK K      +   E    + + +  + G +  I+++ +K L  TD   
Sbjct: 161 KRKRYQSSGKSKKPKFDPFSLTAARETPEWLLDVMRKMKGAEGPIKLIYEKTLTATDVKP 220

Query: 85  NHGRLSIPMKKLL-NDFVTEEESRFLS---EQDEEQKERNGMNVLIVDPLLRESVIGLKM 144
           +  RL IP  KLL NDF+T EESR ++   E++EE  ++ G+  +IV+   +E  +   +
Sbjct: 221 SESRLLIPFNKLLRNDFLTPEESRAIAIDKEEEEEDTKKIGVKTIIVNQFSKEWSLRFLI 280

Query: 145 W-----KVGSGDIYCLVSE-WNSFAQRNSLESGDYIQLWSFRKNGLRTEERVSSNLCFAM 195
           W     K G+G +Y  ++  WN     N L++ D I LW+FR  G+         LCFA+
Sbjct: 281 WVMKKKKSGNGTLYYTLNRGWNGVVSGNKLKANDNISLWTFRCGGV---------LCFAL 333

[Close]

BLAST of Lcy01g017040 vs. ExPASy Swiss-Prot
Match: Q9LRX6 (Putative B3 domain-containing protein At3g24850 OS=Arabidopsis thaliana OX=3702 GN=At3g24850 PE=3 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 8.7e-12
Identity = 47/133 (35.34%), Postives = 69/133 (51.88%), Query Frame = 0


Query: 66  DIRIVIQKQLQDTDRSKNHGRLSIPMKKLL-NDFVTEEESRFLSEQDEEQKERNGMNVLI 125
           D +++ +K L  TD +    RLS+P   LL NDF+T  ESR + E D    ++ G+  ++
Sbjct: 225 DAKLIFEKTLFVTDINPTQNRLSMPFNNLLQNDFLTSVESRIIKE-DINNNKKIGVGAIL 284

Query: 126 VDPLLRESVIGLKMWKV----GSGD-IYCLVSEWNSFAQRNSLESGDYIQLWSFRKNGLR 185
           VD    +  + LK W++    G G   Y L+  WN   + N L+ GD I +WSFR  G+ 
Sbjct: 285 VDQRSVKWGVMLKRWELKKESGKGSWNYNLICGWNDVVEANGLKEGDNISVWSFRCRGV- 344

Query: 186 TEERVSSNLCFAM 193
                   LCFAM
Sbjct: 345 --------LCFAM 347

[Close]

BLAST of Lcy01g017040 vs. ExPASy Swiss-Prot
Match: Q9XIP5 (Putative B3 domain-containing protein At2g27410 OS=Arabidopsis thaliana OX=3702 GN=At2g27410 PE=3 SV=2)

HSP 1 Score: 71.6 bits (174), Expect = 1.1e-11
Identity = 55/188 (29.26%), Postives = 91/188 (48.40%), Query Frame = 0


Query: 21  RSSRKRKNDASDTPNKKVKRKEMVFSKTVEMATAMRERIIAI-----GGFDIRIVIQKQL 80
           RS  KR  +     +K  KRK +   +   + T   E ++ +      G++ +++  +QL
Sbjct: 37  RSKEKRPINVEKRSHK--KRKIICPLEEEPIQTTPPEWLLNVMRREENGYNPKLISTRQL 96

Query: 81  QDTDRSKNHGRLSIPMKKLLN-DFVTEEESRFLSEQDEEQKERNGMNVLIVDPLLRESVI 140
             TD  K   RLS+P K++   DF+TE+E+R + E   + ++ NG+ V  VDP L + V+
Sbjct: 97  YKTDLKKTEARLSVPFKQVKTPDFLTEDETRIIHENAMKIRD-NGVPVNFVDPELNKHVL 156

Query: 141 GLKMWKVGSGDIYCLVSEWNSF--AQRNSLESGDYIQLWSFRKNGLRTEERVSSNLCFAM 200
            L+ WK+    IY  V  W +   A +   +  D   LWSFR          +  LCFA+
Sbjct: 157 ELRKWKMKGNWIYVFVKGWKNVLDACKTLFKEDDVYPLWSFRSG--------TGKLCFAL 213

[Close]

BLAST of Lcy01g017040 vs. ExPASy TrEMBL
Match: A0A6J1K5B4 (B3 domain-containing protein At1g05920-like OS=Cucurbita maxima OX=3661 GN=LOC111492430 PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 2.4e-57
Identity = 121/201 (60.20%), Postives = 153/201 (76.12%), Query Frame = 0


Query: 7   LSNTLNLIAAFSLDRSSRKRKNDASDTPNKKVKRKEMVFSKTVEMATAMRERIIAIGGFD 66
           LS TL+LI++F LD + RK + D  D P +K +R+EMVFS TVEM  A+R+RI A+GG D
Sbjct: 7   LSKTLDLISSFGLDTNKRKNR-DCDDEPRRK-RRREMVFSSTVEMPAALRQRIEAMGGTD 66

Query: 67  IRIVIQKQLQDTDRSKNHGRLSIPMKKLLNDFVTEEESRFL--SEQDEEQKERNGMNVLI 126
           ++IV+QKQLQ++DR+KNHGRL IP KKL+N+F TEEE+  +   E D  ++ R GM V I
Sbjct: 67  VQIVMQKQLQESDRNKNHGRLLIPTKKLMNEFATEEEAELMMQEEVDRRRRMRIGMEVAI 126

Query: 127 VDPLLRESVIGLKMWKVGSGDIYCLVSEWNSFAQRNSLESGDYIQLWSFRKNGLRTEERV 186
           +D  LRESVIGLK+WK+GSG  YCL S+WNSFA++NSLESGDYIQLWSFR N        
Sbjct: 127 IDAALRESVIGLKLWKIGSGHNYCLASQWNSFAEQNSLESGDYIQLWSFRSNNNAFIVN- 186

Query: 187 SSNLCFAMVKLDISQGIFQFL 206
             NLCFA+VKLDIS+GIF F+
Sbjct: 187 GHNLCFALVKLDISEGIFNFI 204

[Close]

BLAST of Lcy01g017040 vs. ExPASy TrEMBL
Match: A0A6J1HD06 (B3 domain-containing protein At1g05920-like OS=Cucurbita moschata OX=3662 GN=LOC111462959 PE=4 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 2.1e-56
Identity = 119/201 (59.20%), Postives = 151/201 (75.12%), Query Frame = 0


Query: 7   LSNTLNLIAAFSLDRSSRKRKNDASDTPNKKVKRKEMVFSKTVEMATAMRERIIAIGGFD 66
           +S TL+LI++F LD + RK + D  D P +K +R+EMVFS TVEM  A+R+RI A+GG D
Sbjct: 7   VSKTLDLISSFGLDTNKRKNR-DCDDEPRRK-RRREMVFSSTVEMPAALRQRIEAMGGTD 66

Query: 67  IRIVIQKQLQDTDRSKNHGRLSIPMKKLLNDFVTEEESRFL--SEQDEEQKERNGMNVLI 126
           +++V QKQLQ++DR+KNHGRL IP KKL+NDF TEEE+  +   E D  ++ R GM V I
Sbjct: 67  VQLVTQKQLQESDRNKNHGRLLIPTKKLMNDFATEEEAELMMQEEVDRRRRRRIGMQVAI 126

Query: 127 VDPLLRESVIGLKMWKVGSGDIYCLVSEWNSFAQRNSLESGDYIQLWSFRKNGLRTEERV 186
           +D  LRESVIGLK+WK+GSG  YCL S WNSFA++NSLESGDYIQLWSFR N        
Sbjct: 127 IDAALRESVIGLKLWKIGSGHNYCLASRWNSFAEQNSLESGDYIQLWSFRSNNNAFIVN- 186

Query: 187 SSNLCFAMVKLDISQGIFQFL 206
             +LCFA+VKLDIS+GIF F+
Sbjct: 187 DHSLCFALVKLDISEGIFNFI 204

[Close]

BLAST of Lcy01g017040 vs. ExPASy TrEMBL
Match: A0A6J1CSV9 (B3 domain-containing protein At2g31420-like OS=Momordica charantia OX=3673 GN=LOC111013909 PE=4 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 3.9e-55
Identity = 113/183 (61.75%), Postives = 142/183 (77.60%), Query Frame = 0


Query: 23  SRKRKNDASDTPNKKVKRKEMVFSKTVEMATAMRERIIAIGGFDIRIVIQKQLQDTDRSK 82
           S+  KND      KK K+ E+VFS T+EM   +R+RI  +GG+DI+IVIQK+LQDTD ++
Sbjct: 29  SKVNKND-----QKKHKQLEVVFSSTIEMPAXLRDRIAELGGYDIQIVIQKRLQDTDLNR 88

Query: 83  NHGRLSIPMKKLLNDFVTEEESRFLSEQDEEQKERNGMNVLIVDPLLRESVIGLKMWKVG 142
           NHGRLSIP+KKLLNDF TEEE + L +QDE Q  +NG+  LI+DP LRES I LK WK+G
Sbjct: 89  NHGRLSIPIKKLLNDFTTEEEKQLLDQQDEHQNNKNGVXALILDPCLRESTIHLKKWKIG 148

Query: 143 SGDIYCLVSEWNSFAQRNSLESGDYIQLWSFRKNGLRTEERVSSNLCFAMVKLDISQGIF 202
           S +IYCLVS+WNS AQ+NSLESGD+IQLWSFRKN        + +LCFA+VKLDIS+GIF
Sbjct: 149 SREIYCLVSQWNSLAQKNSLESGDFIQLWSFRKN----SGTPTPHLCFALVKLDISEGIF 202

Query: 203 QFL 206
           +F+
Sbjct: 209 RFI 202

[Close]

BLAST of Lcy01g017040 vs. ExPASy TrEMBL
Match: A0A5A7VHB3 (B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G005760 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 5.1e-55
Identity = 116/193 (60.10%), Postives = 145/193 (75.13%), Query Frame = 0


Query: 22  SSRKRKND---ASDTPNKKVKRKEMVFSKTVEMATAMRERIIAIGGFDIRIVIQKQLQDT 81
           S +++KND    SD   KK +RK+MVFSKT+EM+  +R+RI  + GFDI+ V QK+LQDT
Sbjct: 61  SEKRKKNDNSPGSDHRPKKERRKDMVFSKTIEMSAMLRDRIDELDGFDIQYVTQKRLQDT 120

Query: 82  DRSKNHGRLSIPMKKLLNDFVTEEESRFLSEQDEEQ-KERNGMNVLIVDPLLRESVIGLK 141
           D +KNHGRL IP KKL NDF +EEE + L + D+E  K +NGM VLI+DP LR   I LK
Sbjct: 121 DMNKNHGRLLIPFKKLRNDFASEEEKQLLKQHDQEDLKNKNGMTVLIIDPQLRNRHIELK 180

Query: 142 MWKVGSGDIYCLVSEWNSFAQRNSLESGDYIQLWSFRKN-----GLRTEERVSSNLCFAM 201
           MWKVG  D YCL+S+WNSF Q NSLESGDYIQLWSFR N     G +++  V+SNLCFA+
Sbjct: 181 MWKVGQHDSYCLMSKWNSFVQENSLESGDYIQLWSFRSNNIFIVGHQSQVPVNSNLCFAL 240

Query: 202 VKLDISQGIFQFL 206
           VKLDIS+GIF+F+
Sbjct: 241 VKLDISEGIFKFI 253

[Close]

BLAST of Lcy01g017040 vs. ExPASy TrEMBL
Match: A0A1S3BCJ5 (B3 domain-containing protein At3g25182-like OS=Cucumis melo OX=3656 GN=LOC103488545 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 5.1e-55
Identity = 116/193 (60.10%), Postives = 145/193 (75.13%), Query Frame = 0


Query: 22  SSRKRKND---ASDTPNKKVKRKEMVFSKTVEMATAMRERIIAIGGFDIRIVIQKQLQDT 81
           S +++KND    SD   KK +RK+MVFSKT+EM+  +R+RI  + GFDI+ V QK+LQDT
Sbjct: 61  SEKRKKNDNSPGSDHRPKKERRKDMVFSKTIEMSAMLRDRIDELDGFDIQYVTQKRLQDT 120

Query: 82  DRSKNHGRLSIPMKKLLNDFVTEEESRFLSEQDEEQ-KERNGMNVLIVDPLLRESVIGLK 141
           D +KNHGRL IP KKL NDF +EEE + L + D+E  K +NGM VLI+DP LR   I LK
Sbjct: 121 DMNKNHGRLLIPFKKLRNDFASEEEKQLLKQHDQEDLKNKNGMTVLIIDPQLRNRHIELK 180

Query: 142 MWKVGSGDIYCLVSEWNSFAQRNSLESGDYIQLWSFRKN-----GLRTEERVSSNLCFAM 201
           MWKVG  D YCL+S+WNSF Q NSLESGDYIQLWSFR N     G +++  V+SNLCFA+
Sbjct: 181 MWKVGQHDSYCLMSKWNSFVQENSLESGDYIQLWSFRSNNIFIVGHQSQVPVNSNLCFAL 240

Query: 202 VKLDISQGIFQFL 206
           VKLDIS+GIF+F+
Sbjct: 241 VKLDISEGIFKFI 253

[Close]

BLAST of Lcy01g017040 vs. NCBI nr
Match: XP_022997537.1 (B3 domain-containing protein At1g05920-like [Cucurbita maxima])

HSP 1 Score: 231.9 bits (590), Expect = 5.0e-57
Identity = 121/201 (60.20%), Postives = 153/201 (76.12%), Query Frame = 0


Query: 7   LSNTLNLIAAFSLDRSSRKRKNDASDTPNKKVKRKEMVFSKTVEMATAMRERIIAIGGFD 66
           LS TL+LI++F LD + RK + D  D P +K +R+EMVFS TVEM  A+R+RI A+GG D
Sbjct: 7   LSKTLDLISSFGLDTNKRKNR-DCDDEPRRK-RRREMVFSSTVEMPAALRQRIEAMGGTD 66

Query: 67  IRIVIQKQLQDTDRSKNHGRLSIPMKKLLNDFVTEEESRFL--SEQDEEQKERNGMNVLI 126
           ++IV+QKQLQ++DR+KNHGRL IP KKL+N+F TEEE+  +   E D  ++ R GM V I
Sbjct: 67  VQIVMQKQLQESDRNKNHGRLLIPTKKLMNEFATEEEAELMMQEEVDRRRRMRIGMEVAI 126

Query: 127 VDPLLRESVIGLKMWKVGSGDIYCLVSEWNSFAQRNSLESGDYIQLWSFRKNGLRTEERV 186
           +D  LRESVIGLK+WK+GSG  YCL S+WNSFA++NSLESGDYIQLWSFR N        
Sbjct: 127 IDAALRESVIGLKLWKIGSGHNYCLASQWNSFAEQNSLESGDYIQLWSFRSNNNAFIVN- 186

Query: 187 SSNLCFAMVKLDISQGIFQFL 206
             NLCFA+VKLDIS+GIF F+
Sbjct: 187 GHNLCFALVKLDISEGIFNFI 204

[Close]

BLAST of Lcy01g017040 vs. NCBI nr
Match: KAG6598443.1 (B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 231.5 bits (589), Expect = 6.6e-57
Identity = 117/199 (58.79%), Postives = 153/199 (76.88%), Query Frame = 0


Query: 7   LSNTLNLIAAFSLDRSSRKRKNDASDTPNKKVKRKEMVFSKTVEMATAMRERIIAIGGFD 66
           +S TL+LI++F L+ + RK + D  D P +K +R+EMVFS TVEM  A+RERI A+GG D
Sbjct: 7   VSKTLDLISSFGLNTNKRKNR-DCDDEPRRK-RRREMVFSSTVEMPAALRERIEAMGGTD 66

Query: 67  IRIVIQKQLQDTDRSKNHGRLSIPMKKLLNDFVTEEESRFLSEQDEEQKERNGMNVLIVD 126
           +++V QKQLQ++DR+KNHGRL IP KKL+NDF TEEE+  + +++ +++ R GM V I+D
Sbjct: 67  VQLVTQKQLQESDRNKNHGRLLIPTKKLMNDFATEEEAELMMQEEVDRRRRIGMQVAIID 126

Query: 127 PLLRESVIGLKMWKVGSGDIYCLVSEWNSFAQRNSLESGDYIQLWSFRKNGLRTEERVSS 186
             LRESVIGLK+WK+GSG  YCL S WNSFA++NSLESGDYIQLWSFR N          
Sbjct: 127 SALRESVIGLKLWKIGSGHNYCLASRWNSFAEQNSLESGDYIQLWSFRSNNNAFIVN-DH 186

Query: 187 NLCFAMVKLDISQGIFQFL 206
           +LCFA+VKLDIS+GIF F+
Sbjct: 187 SLCFALVKLDISEGIFNFI 202

[Close]

BLAST of Lcy01g017040 vs. NCBI nr
Match: XP_022962562.1 (B3 domain-containing protein At1g05920-like [Cucurbita moschata])

HSP 1 Score: 228.8 bits (582), Expect = 4.3e-56
Identity = 119/201 (59.20%), Postives = 151/201 (75.12%), Query Frame = 0


Query: 7   LSNTLNLIAAFSLDRSSRKRKNDASDTPNKKVKRKEMVFSKTVEMATAMRERIIAIGGFD 66
           +S TL+LI++F LD + RK + D  D P +K +R+EMVFS TVEM  A+R+RI A+GG D
Sbjct: 7   VSKTLDLISSFGLDTNKRKNR-DCDDEPRRK-RRREMVFSSTVEMPAALRQRIEAMGGTD 66

Query: 67  IRIVIQKQLQDTDRSKNHGRLSIPMKKLLNDFVTEEESRFL--SEQDEEQKERNGMNVLI 126
           +++V QKQLQ++DR+KNHGRL IP KKL+NDF TEEE+  +   E D  ++ R GM V I
Sbjct: 67  VQLVTQKQLQESDRNKNHGRLLIPTKKLMNDFATEEEAELMMQEEVDRRRRRRIGMQVAI 126

Query: 127 VDPLLRESVIGLKMWKVGSGDIYCLVSEWNSFAQRNSLESGDYIQLWSFRKNGLRTEERV 186
           +D  LRESVIGLK+WK+GSG  YCL S WNSFA++NSLESGDYIQLWSFR N        
Sbjct: 127 IDAALRESVIGLKLWKIGSGHNYCLASRWNSFAEQNSLESGDYIQLWSFRSNNNAFIVN- 186

Query: 187 SSNLCFAMVKLDISQGIFQFL 206
             +LCFA+VKLDIS+GIF F+
Sbjct: 187 DHSLCFALVKLDISEGIFNFI 204

[Close]

BLAST of Lcy01g017040 vs. NCBI nr
Match: XP_023546349.1 (B3 domain-containing protein At1g05920-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 228.4 bits (581), Expect = 5.6e-56
Identity = 119/201 (59.20%), Postives = 150/201 (74.63%), Query Frame = 0


Query: 7   LSNTLNLIAAFSLDRSSRKRKNDASDTPNKKVKRKEMVFSKTVEMATAMRERIIAIGGFD 66
           +S TL+LI++F LD + RK + D  D P +K +R+EMVFS TVEM  A+RERI A+GG D
Sbjct: 27  VSKTLDLISSFGLDTNKRKNR-DCDDEPKRK-RRREMVFSSTVEMPAALRERIEAMGGTD 86

Query: 67  IRIVIQKQLQDTDRSKNHGRLSIPMKKLLNDFVTEEESRFL--SEQDEEQKERNGMNVLI 126
           +++V QKQLQ++DR+KNHGRL IP KKL+NDF TEEE+  +   E D  ++ R GM V I
Sbjct: 87  VQLVTQKQLQESDRNKNHGRLLIPTKKLMNDFATEEEAELMMQEEVDRRRRRRIGMQVAI 146

Query: 127 VDPLLRESVIGLKMWKVGSGDIYCLVSEWNSFAQRNSLESGDYIQLWSFRKNGLRTEERV 186
           +D  LRE+VIGLK+WK+GSG  YCL S WNSFA++NSLESGDYIQLWSFR N        
Sbjct: 147 IDSALRETVIGLKLWKIGSGHNYCLASRWNSFAEQNSLESGDYIQLWSFRSNNNAFIVN- 206

Query: 187 SSNLCFAMVKLDISQGIFQFL 206
              LCFA+VKLDIS+GIF F+
Sbjct: 207 DHTLCFALVKLDISEGIFNFI 224

[Close]

BLAST of Lcy01g017040 vs. NCBI nr
Match: XP_022144152.1 (B3 domain-containing protein At2g31420-like [Momordica charantia])

HSP 1 Score: 224.6 bits (571), Expect = 8.0e-55
Identity = 113/183 (61.75%), Postives = 142/183 (77.60%), Query Frame = 0


Query: 23  SRKRKNDASDTPNKKVKRKEMVFSKTVEMATAMRERIIAIGGFDIRIVIQKQLQDTDRSK 82
           S+  KND      KK K+ E+VFS T+EM   +R+RI  +GG+DI+IVIQK+LQDTD ++
Sbjct: 29  SKVNKND-----QKKHKQLEVVFSSTIEMPAXLRDRIAELGGYDIQIVIQKRLQDTDLNR 88

Query: 83  NHGRLSIPMKKLLNDFVTEEESRFLSEQDEEQKERNGMNVLIVDPLLRESVIGLKMWKVG 142
           NHGRLSIP+KKLLNDF TEEE + L +QDE Q  +NG+  LI+DP LRES I LK WK+G
Sbjct: 89  NHGRLSIPIKKLLNDFTTEEEKQLLDQQDEHQNNKNGVXALILDPCLRESTIHLKKWKIG 148

Query: 143 SGDIYCLVSEWNSFAQRNSLESGDYIQLWSFRKNGLRTEERVSSNLCFAMVKLDISQGIF 202
           S +IYCLVS+WNS AQ+NSLESGD+IQLWSFRKN        + +LCFA+VKLDIS+GIF
Sbjct: 149 SREIYCLVSQWNSLAQKNSLESGDFIQLWSFRKN----SGTPTPHLCFALVKLDISEGIF 202

Query: 203 QFL 206
           +F+
Sbjct: 209 RFI 202

[Close]

BLAST of Lcy01g017040 vs. TAIR 10
Match: AT1G05920.1 (Domain of unknown function (DUF313) )

HSP 1 Score: 78.6 bits (192), Expect = 6.6e-15
Identity = 47/137 (34.31%), Postives = 70/137 (51.09%), Query Frame = 0


Query: 63  GGFDIRIVIQKQLQDTDRSKNHGRLSIPMKKLL-NDFVTEEESRFLSEQDEEQKERNGMN 122
           G  D +++I+K L   D      RLSIP+  ++ NDF+T +ESR + E +   +   G+ 
Sbjct: 176 GAGDPKLIIEKNLDSNDVDPRQNRLSIPINTVIQNDFLTLDESRLIDEDEITNEGNMGVA 235

Query: 123 VLIVDPLLRESVIGLKMW--KVGSGDIY---CLVSEWNSFAQRNSLESGDYIQLWSFRKN 182
             +VD   ++  +G K W     SG  Y    L  EW++  + N L+ GD I LWSFR N
Sbjct: 236 AFLVDQRTKKWNMGFKQWFMTTDSGSSYWSFVLRGEWSNVVETNGLKEGDKISLWSFRSN 295

Query: 183 GLRTEERVSSNLCFAMV 194
            +         LCFA+V
Sbjct: 296 DI---------LCFALV 303

[Close]

BLAST of Lcy01g017040 vs. TAIR 10
Match: AT3G49610.1 (Domain of unknown function (DUF313) )

HSP 1 Score: 73.6 bits (179), Expect = 2.1e-13
Identity = 57/182 (31.32%), Postives = 91/182 (50.00%), Query Frame = 0


Query: 25  KRKNDASDTPNKKVKRKEMVFSKTVEMATAMRERIIAIGGFD--IRIVIQKQLQDTDRSK 84
           KRK   S   +KK K      +   E    + + +  + G +  I+++ +K L  TD   
Sbjct: 161 KRKRYQSSGKSKKPKFDPFSLTAARETPEWLLDVMRKMKGAEGPIKLIYEKTLTATDVKP 220

Query: 85  NHGRLSIPMKKLL-NDFVTEEESRFLS---EQDEEQKERNGMNVLIVDPLLRESVIGLKM 144
           +  RL IP  KLL NDF+T EESR ++   E++EE  ++ G+  +IV+   +E  +   +
Sbjct: 221 SESRLLIPFNKLLRNDFLTPEESRAIAIDKEEEEEDTKKIGVKTIIVNQFSKEWSLRFLI 280

Query: 145 W-----KVGSGDIYCLVSE-WNSFAQRNSLESGDYIQLWSFRKNGLRTEERVSSNLCFAM 195
           W     K G+G +Y  ++  WN     N L++ D I LW+FR  G+         LCFA+
Sbjct: 281 WVMKKKKSGNGTLYYTLNRGWNGVVSGNKLKANDNISLWTFRCGGV---------LCFAL 333

[Close]

BLAST of Lcy01g017040 vs. TAIR 10
Match: AT3G24850.1 (Domain of unknown function (DUF313) )

HSP 1 Score: 72.0 bits (175), Expect = 6.2e-13
Identity = 47/133 (35.34%), Postives = 69/133 (51.88%), Query Frame = 0


Query: 66  DIRIVIQKQLQDTDRSKNHGRLSIPMKKLL-NDFVTEEESRFLSEQDEEQKERNGMNVLI 125
           D +++ +K L  TD +    RLS+P   LL NDF+T  ESR + E D    ++ G+  ++
Sbjct: 225 DAKLIFEKTLFVTDINPTQNRLSMPFNNLLQNDFLTSVESRIIKE-DINNNKKIGVGAIL 284

Query: 126 VDPLLRESVIGLKMWKV----GSGD-IYCLVSEWNSFAQRNSLESGDYIQLWSFRKNGLR 185
           VD    +  + LK W++    G G   Y L+  WN   + N L+ GD I +WSFR  G+ 
Sbjct: 285 VDQRSVKWGVMLKRWELKKESGKGSWNYNLICGWNDVVEANGLKEGDNISVWSFRCRGV- 344

Query: 186 TEERVSSNLCFAM 193
                   LCFAM
Sbjct: 345 --------LCFAM 347

[Close]

BLAST of Lcy01g017040 vs. TAIR 10
Match: AT2G27410.1 (Domain of unknown function (DUF313) )

HSP 1 Score: 71.6 bits (174), Expect = 8.1e-13
Identity = 55/188 (29.26%), Postives = 91/188 (48.40%), Query Frame = 0


Query: 21  RSSRKRKNDASDTPNKKVKRKEMVFSKTVEMATAMRERIIAI-----GGFDIRIVIQKQL 80
           RS  KR  +     +K  KRK +   +   + T   E ++ +      G++ +++  +QL
Sbjct: 37  RSKEKRPINVEKRSHK--KRKIICPLEEEPIQTTPPEWLLNVMRREENGYNPKLISTRQL 96

Query: 81  QDTDRSKNHGRLSIPMKKLLN-DFVTEEESRFLSEQDEEQKERNGMNVLIVDPLLRESVI 140
             TD  K   RLS+P K++   DF+TE+E+R + E   + ++ NG+ V  VDP L + V+
Sbjct: 97  YKTDLKKTEARLSVPFKQVKTPDFLTEDETRIIHENAMKIRD-NGVPVNFVDPELNKHVL 156

Query: 141 GLKMWKVGSGDIYCLVSEWNSF--AQRNSLESGDYIQLWSFRKNGLRTEERVSSNLCFAM 200
            L+ WK+    IY  V  W +   A +   +  D   LWSFR          +  LCFA+
Sbjct: 157 ELRKWKMKGNWIYVFVKGWKNVLDACKTLFKEDDVYPLWSFRSG--------TGKLCFAL 213

[Close]

BLAST of Lcy01g017040 vs. TAIR 10
Match: AT5G24050.1 (Domain of unknown function (DUF313) )

HSP 1 Score: 70.1 bits (170), Expect = 2.4e-12
Identity = 60/189 (31.75%), Postives = 93/189 (49.21%), Query Frame = 0


Query: 19  LDRSSRKRKNDASDTPNKKVKRKEMV-FSKT--------VEMATAMRERIIAIGGFDIRI 78
           ++ +SRKR+       +  VK+  +  FS+T        V++ T M+E        D ++
Sbjct: 165 MENTSRKRRAVEQRKRSGGVKKANVAPFSQTARETPEWLVKVMTNMKE------AKDAKL 224

Query: 79  VIQKQLQDTDRSKNHGRLSIPMKKLL-NDFVTEEESRFLSEQDEEQKERNGMNVLIVDPL 138
           + +K L  TD +    RLS+P   LL NDF+T  ES  ++E D     + G+  ++VD  
Sbjct: 225 IFEKTLFVTDVNPTKNRLSMPFNNLLRNDFLTSVESIIINE-DINNNNKIGVGAILVDQR 284

Query: 139 LRESVIGLKMWKV----GSGD-IYCLVSEWNSFAQRNSLESGDYIQLWSFRKNGLRTEER 193
            ++  + LK W++    G G   Y L+  WN   + N L+ GD I LWSFR  G+     
Sbjct: 285 CKKWGVMLKRWEMKKESGKGSWSYNLICGWNDIVEANRLKEGDNITLWSFRCCGI----- 337

The following BLAST results are available for this feature:

BLAST of Lcy01g017040 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5RM09	9.3e-14	34.31	B3 domain-containing protein At1g05920 OS=Arabidopsis thaliana OX=3702 GN=At1g05...	[more]
Q9LSF7	1.0e-12	35.34	B3 domain-containing protein At3g25182 OS=Arabidopsis thaliana OX=3702 GN=At3g25...	[more]
Q9SCJ8	3.0e-12	31.32	Putative B3 domain-containing protein At3g49610 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9LRX6	8.7e-12	35.34	Putative B3 domain-containing protein At3g24850 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9XIP5	1.1e-11	29.26	Putative B3 domain-containing protein At2g27410 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Lcy01g017040 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K5B4	2.4e-57	60.20	B3 domain-containing protein At1g05920-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1HD06	2.1e-56	59.20	B3 domain-containing protein At1g05920-like OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1CSV9	3.9e-55	61.75	B3 domain-containing protein At2g31420-like OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A5A7VHB3	5.1e-55	60.10	B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]
A0A1S3BCJ5	5.1e-55	60.10	B3 domain-containing protein At3g25182-like OS=Cucumis melo OX=3656 GN=LOC103488...	[more]

BLAST of Lcy01g017040 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022997537.1	5.0e-57	60.20	B3 domain-containing protein At1g05920-like [Cucurbita maxima]	[more]
KAG6598443.1	6.6e-57	58.79	B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022962562.1	4.3e-56	59.20	B3 domain-containing protein At1g05920-like [Cucurbita moschata]	[more]
XP_023546349.1	5.6e-56	59.20	B3 domain-containing protein At1g05920-like [Cucurbita pepo subsp. pepo]	[more]
XP_022144152.1	8.0e-55	61.75	B3 domain-containing protein At2g31420-like [Momordica charantia]	[more]

BLAST of Lcy01g017040 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G05920.1	6.6e-15	34.31	Domain of unknown function (DUF313)	[more]
AT3G49610.1	2.1e-13	31.32	Domain of unknown function (DUF313)	[more]
AT3G24850.1	6.2e-13	35.34	Domain of unknown function (DUF313)	[more]
AT2G27410.1	8.1e-13	29.26	Domain of unknown function (DUF313)	[more]
AT5G24050.1	2.4e-12	31.75	Domain of unknown function (DUF313)	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005508	B3 domain-containing protein At2g31720-like	PFAM	PF03754	DUF313	coord: 65..155 e-value: 3.1E-20 score: 72.5
IPR005508	B3 domain-containing protein At2g31720-like	PANTHER	PTHR31541	B3 DOMAIN PLANT PROTEIN-RELATED	coord: 23..195
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	2.40.330.10		coord: 65..187 e-value: 2.2E-15 score: 58.2
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 70..178
None	No IPR available	PANTHER	PTHR31541:SF25	DOMAIN PROTEIN, PUTATIVE (DUF313)-RELATED	coord: 23..195

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy01g017040.1	Lcy01g017040.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding