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Lcy01g016660 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCGATTTCTGTTTAAACCAATGGCTGAAGAAGGGCAAGTGATTGCATGTCATAAGAAAGCCGAATGGGATGCTCAATTAACAAAAGCGAAGGAATCGGGAAAACTGGTATCGTTTTCTTGATTTTTCGGAGTCTTCATCTCTACATTTCAATTGATTCCGATGGAATTTTGGATTCTCTGGATAGATATGTTGAAGCATTTTCATGATTGCTTTCGCCTTGTCCTGTTCTGTTAGGACATTGTTCGATGTTTTGGTACAAGTCGCGATGCATTCGTTAGGGTTTCTGATATCTTATATAGGCTAGTTATATTCGATTTATCTGGATTGAATGATCGTGTTGAAATTGATGCTTTCGAGGTTTCCTTTTTGACGTCTTCTGGAATCTTTGAATTGTATTCTTCAATCCTTCTCTGTTACTCTTTTCGTTTGTTTTCCTTTTTTTTTTTGTATGTAAGAATTTGAACTTGATTATGCTATTTTGCATTGACCGAACTTGAGTGATTCTGTGTTAGATGGTAGTATTCCAGTTTGTGTCCATTTTTTGTTCCTGACGTTTTTTGTTTGGTAGATTGTGGTGGATTTTACTGCTTCCTGGTGCGGGCCATGCCGTGCAATTGCTCCATATTTCTCAGAATTGGCTAAGAATAATCCCAGTGTCATTTTCCTGAAAGTGGACGTCGATGAATTGAATGTAAATATATTTAAGCTTTTTTTAACTCTTTCCTTTCTATTATATCATATGTCAACAGTTCTATTCCTTAAGGATATTGCTGAATACAGTAGCATGCACTGGAACTGTTGTCTTTTTGACTCGATCCCTTTTTTCCCCCCCACAAACAATGGCTTCTGTTTTTCTCTGCAGACTATTGCTAAAGAGTGGGAGGTTGATGCAATGCCCACGTTTGTTTTCCTGAAAGGAGGGGAAAAAATTCACAAGATTGTTGGTGCTGATAAAGTGGCGCTGTTGAGGAAAATAGAAGAGCTTAAAGCTCCATCGGCTGCTACTTCTACTGCTTAGACAATCACCTTATTAGTATGGTGTTATGGTGATTCCATTTTCGAGTTTGATCTCCTTGTGAATTTCATAACTTTGTGTCTAAGACGTTTACTGTTTTGTTTCCCCTTAGTTGAATCATGTGCGCAATTCTCAATTATGATTCTGGTGCTTGTTATAGAGAAGCTGCAGGTTTCAGTGAGGAATAAAATGGGCAGGAACTTTGTTGAACTCTGAAGTTGCTTGATTTGCACATCTTATCAGCAGTCTGCTGTAAGAACTTGACTCACTGTTTTTCTTTTTCATCTAATTTTCT GCGATTTCTGTTTAAACCAATGGCTGAAGAAGGGCAAGTGATTGCATGTCATAAGAAAGCCGAATGGGATGCTCAATTAACAAAAGCGAAGGAATCGGGAAAACTGATTGTGGTGGATTTTACTGCTTCCTGGTGCGGGCCATGCCGTGCAATTGCTCCATATTTCTCAGAATTGGCTAAGAATAATCCCAGTGTCATTTTCCTGAAAGTGGACGTCGATGAATTGAATACTATTGCTAAAGAGTGGGAGGTTGATGCAATGCCCACGTTTGTTTTCCTGAAAGGAGGGGAAAAAATTCACAAGATTGTTGGTGCTGATAAAGTGGCGCTGTTGAGGAAAATAGAAGAGCTTAAAGCTCCATCGGCTGCTACTTCTACTGCTTAGACAATCACCTTATTAGTATGGTGTTATGGTGATTCCATTTTCGAGTTTGATCTCCTTGTGAATTTCATAACTTTGTGTCTAAGACGTTTACTGTTTTGTTTCCCCTTAGTTGAATCATGTGCGCAATTCTCAATTATGATTCTGGTGCTTGTTATAGAGAAGCTGCAGGTTTCAGTGAGGAATAAAATGGGCAGGAACTTTGTTGAACTCTGAAGTTGCTTGATTTGCACATCTTATCAGCAGTCTGCTGTAAGAACTTGACTCACTGTTTTTCTTTTTCATCTAATTTTCT ATGGCTGAAGAAGGGCAAGTGATTGCATGTCATAAGAAAGCCGAATGGGATGCTCAATTAACAAAAGCGAAGGAATCGGGAAAACTGATTGTGGTGGATTTTACTGCTTCCTGGTGCGGGCCATGCCGTGCAATTGCTCCATATTTCTCAGAATTGGCTAAGAATAATCCCAGTGTCATTTTCCTGAAAGTGGACGTCGATGAATTGAATACTATTGCTAAAGAGTGGGAGGTTGATGCAATGCCCACGTTTGTTTTCCTGAAAGGAGGGGAAAAAATTCACAAGATTGTTGGTGCTGATAAAGTGGCGCTGTTGAGGAAAATAGAAGAGCTTAAAGCTCCATCGGCTGCTACTTCTACTGCTTAG MAEEGQVIACHKKAEWDAQLTKAKESGKLIVVDFTASWCGPCRAIAPYFSELAKNNPSVIFLKVDVDELNTIAKEWEVDAMPTFVFLKGGEKIHKIVGADKVALLRKIEELKAPSAATSTA Homology
BLAST of Lcy01g016660 vs. ExPASy Swiss-Prot
Match: Q96419 (Thioredoxin H-type OS=Fagopyrum esculentum OX=3617 PE=3 SV=1) HSP 1 Score: 148.3 bits (373), Expect = 5.7e-35 Identity = 69/108 (63.89%), Postives = 84/108 (77.78%), Query Frame = 0
BLAST of Lcy01g016660 vs. ExPASy Swiss-Prot
Match: Q0D840 (Thioredoxin H1 OS=Oryza sativa subsp. japonica OX=39947 GN=TRXH PE=1 SV=1) HSP 1 Score: 146.7 bits (369), Expect = 1.6e-34 Identity = 69/120 (57.50%), Postives = 92/120 (76.67%), Query Frame = 0
BLAST of Lcy01g016660 vs. ExPASy Swiss-Prot
Match: A2YIW7 (Thioredoxin H-type OS=Oryza sativa subsp. indica OX=39946 GN=TRXH PE=1 SV=1) HSP 1 Score: 146.7 bits (369), Expect = 1.6e-34 Identity = 69/120 (57.50%), Postives = 92/120 (76.67%), Query Frame = 0
BLAST of Lcy01g016660 vs. ExPASy Swiss-Prot
Match: P29449 (Thioredoxin H-type 1 OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 144.8 bits (364), Expect = 6.3e-34 Identity = 66/118 (55.93%), Postives = 86/118 (72.88%), Query Frame = 0
BLAST of Lcy01g016660 vs. ExPASy Swiss-Prot
Match: P29448 (Thioredoxin H1 OS=Arabidopsis thaliana OX=3702 GN=TRX1 PE=1 SV=1) HSP 1 Score: 142.1 bits (357), Expect = 4.1e-33 Identity = 63/100 (63.00%), Postives = 79/100 (79.00%), Query Frame = 0
BLAST of Lcy01g016660 vs. ExPASy TrEMBL
Match: A0A6J1KLL7 (thioredoxin H-type-like OS=Cucurbita maxima OX=3661 GN=LOC111496363 PE=4 SV=1) HSP 1 Score: 214.2 bits (544), Expect = 3.1e-52 Identity = 100/120 (83.33%), Postives = 111/120 (92.50%), Query Frame = 0
BLAST of Lcy01g016660 vs. ExPASy TrEMBL
Match: A0A6J1GHE8 (thioredoxin H-type-like OS=Cucurbita moschata OX=3662 GN=LOC111454193 PE=4 SV=1) HSP 1 Score: 214.2 bits (544), Expect = 3.1e-52 Identity = 100/121 (82.64%), Postives = 112/121 (92.56%), Query Frame = 0
BLAST of Lcy01g016660 vs. ExPASy TrEMBL
Match: A0A1S3BB48 (thioredoxin H1-like OS=Cucumis melo OX=3656 GN=LOC103488007 PE=4 SV=1) HSP 1 Score: 203.8 bits (517), Expect = 4.2e-49 Identity = 97/122 (79.51%), Postives = 111/122 (90.98%), Query Frame = 0
BLAST of Lcy01g016660 vs. ExPASy TrEMBL
Match: A0A0A0LRK2 (Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G362490 PE=4 SV=1) HSP 1 Score: 197.2 bits (500), Expect = 3.9e-47 Identity = 94/123 (76.42%), Postives = 108/123 (87.80%), Query Frame = 0
BLAST of Lcy01g016660 vs. ExPASy TrEMBL
Match: K7NBX3 (Thioredoxin H OS=Siraitia grosvenorii OX=190515 PE=2 SV=1) HSP 1 Score: 196.1 bits (497), Expect = 8.7e-47 Identity = 94/121 (77.69%), Postives = 104/121 (85.95%), Query Frame = 0
BLAST of Lcy01g016660 vs. NCBI nr
Match: XP_023537338.1 (thioredoxin H-type-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 215.7 bits (548), Expect = 2.2e-52 Identity = 101/120 (84.17%), Postives = 112/120 (93.33%), Query Frame = 0
BLAST of Lcy01g016660 vs. NCBI nr
Match: XP_022951328.1 (thioredoxin H-type-like [Cucurbita moschata] >KAG6585569.1 hypothetical protein SDJN03_18302, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 214.2 bits (544), Expect = 6.4e-52 Identity = 100/121 (82.64%), Postives = 112/121 (92.56%), Query Frame = 0
BLAST of Lcy01g016660 vs. NCBI nr
Match: XP_023002551.1 (thioredoxin H-type-like [Cucurbita maxima]) HSP 1 Score: 214.2 bits (544), Expect = 6.4e-52 Identity = 100/120 (83.33%), Postives = 111/120 (92.50%), Query Frame = 0
BLAST of Lcy01g016660 vs. NCBI nr
Match: XP_038886211.1 (thioredoxin H-type-like [Benincasa hispida]) HSP 1 Score: 205.3 bits (521), Expect = 3.0e-49 Identity = 98/122 (80.33%), Postives = 110/122 (90.16%), Query Frame = 0
BLAST of Lcy01g016660 vs. NCBI nr
Match: XP_008444759.1 (PREDICTED: thioredoxin H1-like [Cucumis melo]) HSP 1 Score: 203.8 bits (517), Expect = 8.7e-49 Identity = 97/122 (79.51%), Postives = 111/122 (90.98%), Query Frame = 0
BLAST of Lcy01g016660 vs. TAIR 10
Match: AT3G51030.1 (thioredoxin H-type 1 ) HSP 1 Score: 142.1 bits (357), Expect = 2.9e-34 Identity = 63/100 (63.00%), Postives = 79/100 (79.00%), Query Frame = 0
BLAST of Lcy01g016660 vs. TAIR 10
Match: AT1G19730.1 (Thioredoxin superfamily protein ) HSP 1 Score: 141.0 bits (354), Expect = 6.4e-34 Identity = 70/108 (64.81%), Postives = 81/108 (75.00%), Query Frame = 0
BLAST of Lcy01g016660 vs. TAIR 10
Match: AT5G42980.1 (thioredoxin 3 ) HSP 1 Score: 136.7 bits (343), Expect = 1.2e-32 Identity = 65/117 (55.56%), Postives = 85/117 (72.65%), Query Frame = 0
BLAST of Lcy01g016660 vs. TAIR 10
Match: AT1G45145.1 (thioredoxin H-type 5 ) HSP 1 Score: 129.8 bits (325), Expect = 1.5e-30 Identity = 60/108 (55.56%), Postives = 80/108 (74.07%), Query Frame = 0
BLAST of Lcy01g016660 vs. TAIR 10
Match: AT3G17880.1 (tetraticopeptide domain-containing thioredoxin ) HSP 1 Score: 115.2 bits (287), Expect = 3.8e-26 Identity = 46/107 (42.99%), Postives = 79/107 (73.83%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
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